Flytrap line	CG name	Old coordinate	Strand	Feature	Genome release	New coordinate	Gene hit	Transcript	Feature hit	Feature number	Coding sequence hit?	Flytrap frame	
BA00113	CG3842	X:6079707	+	Enhancer	3	chrX:6233364						A	
BA00120	CG2207	2L:21461853	-	Enhancer	3	chr2L:21628732	CG2207	RA	intron	1	Yes	A	B
BA00120	CG2207	2L:21461853	-	Enhancer	3	chr2L:21628732	CG2207	RB	intron	2	Yes	A	B
BA00120	CG2207	2L:21461853	-	Enhancer	3	chr2L:21628732	CG2207	RF	intron	1	Yes	A	B
BA00127	CG5146	3L:5542800	+	Enhancer	3	chr3L:5576592						A	
BA00129	CG13868	2R:15375414	-	Enhancer	3	chr2R:16199207	CG13868	RA	intron	2	No	A	
BA00131	CG17383	3R:21462548	+	Enhancer?	3	chr3R:21473183	CG17383	RA	exon	3	No	A	
BA00131	CG17383	3R:21462548	+	Enhancer?	3	chr3R:21473183	CG17383	RB	exon	3	No	A	
BA00131	CG17383	3R:21462548	+	Enhancer?	3	chr3R:21473183	CG17383	RC	exon	3	No	A	
BA00131	CG17383	3R:21462548	+	Enhancer?	3	chr3R:21473183	CG17383	RD	intron	1	No	A	
BA00131	CG17383	3R:21462548	+	Enhancer?	3	chr3R:21473183	CG17383	RE	intron	2	No	A	
BA00131	CG17383	3R:21462548	+	Enhancer?	3	chr3R:21473183	CG17383	RF	exon	1	No	A	
BA00137	CG4730	3R:21494016	-	Enhancer	3	chr3R:21504651						A	
BA00146	CG10293	3R:17859545	+	Enhancer?	3	chr3R:17868581	CG10293	RA	intron	1	No	A	
BA00146	CG10293	3R:17859545	+	Enhancer?	3	chr3R:17868581	CG10293	RB	intron	1	No	A	
BA00146	CG10293	3R:17859545	+	Enhancer?	3	chr3R:17868581	CG10293	RC	intron	1	No	A	
BA00147	CG7188	3L:8268449	-	Enhancer	3	chr3L:8302839						A	
BA00148	CG10578	3L:5711298	-	Enhancer?	3	chr3L:5745090	CG10578	RA	exon	1	No	A	
BA00148	CG10578	3L:5711298	-	Enhancer?	3	chr3L:5745090	CG10578	RB	exon	1	No	A	
BA00153	CG9381	3R:5376897	-	Enhancer?	3	chr3R:5376881	CG9381	RA	intron	1	No	A	
BA00153	CG9381	3R:5376897	-	Enhancer?	3	chr3R:5376881	CG9381	RB	intron	1	No	A	
BA00153	CG9381	3R:5376897	-	Enhancer?	3	chr3R:5376881	CG9381	RC	intron	1	No	A	
BA00155	CG3186	2R:19101733	+	Protein?	3	chr2R:19945688	CG3186	RA	intron	1	No	A	
BA00155	CG3186	2R:19101733	+	Protein?	3	chr2R:19945688	CG3186	RB	intron	1	No	A	
BA00158	CG12428	3R:23518935	-	Enhancer	3	chr3R:23529570	CG12428	RA	exon	6	Yes	A	
BA00158	CG12428	3R:23518935	-	Enhancer	3	chr3R:23529570	CG12428	RB	exon	6	Yes	A	
BA00158	CG12428	3R:23518935	-	Enhancer	3	chr3R:23529570	CG12428	RC	exon	6	Yes	A	
BA00158	CG12428	3R:23518935	-	Enhancer	3	chr3R:23529570	CG12428	RD	exon	6	Yes	A	
BA00158	CG12428	3R:23518935	-	Enhancer	3	chr3R:23529570	CG12428	RE	exon	6	Yes	A	
BA00163	CG2125	4:75143	-	Protein	3	chr4:75143	CG2125	RA	intron	1	Yes	A	B
BA00164	CG9696	2R:16367517	+	Protein?	3	chr2R:17211471	CG9696	RA	intron	1	No	A	
BA00164	CG9696	2R:16367517	+	Protein?	3	chr2R:17211471	CG9696	RD	intron	1	No	A	
BA00164	CG9696	2R:16367517	+	Protein?	3	chr2R:17211471	CG9696	RE	intron	1	No	A	
BA00167	CG1242	3L:3174640	+	Enhancer?	3	chr3L:3194011	CG1242	RA	intron	1	No	A	
BA00169	CG8213	2R:4036551	-	Protein	3	chr2R:4863309	CG8213	RA	intron	1	Yes	A	A
BA00170	CG13073	3L:16163337	-	Enhancer	3	chr3L:16207558						A	
BA00172	CG11329	2L:6669921	-	Enhancer	3	chr2L:6677705						A	
BA00174	CG8372	2L:8204414	-	Novel	3	chr2L:8212183	CG8372	RA	exon	2	Yes	A	
BA00174	CG8372	2L:8204414	-	Novel	3	chr2L:8212183	CG8372	RB	exon	1	Yes	A	
BA00183	CG4264	3R:11068786	+	Enhancer	3	chr3R:11068768	CG4264	RA	intron	1	No	A	
BA00186	unknown	2R:10192693	+	Enhancer?	3	chr2R:11016473	CG11798	RA	exon	1	No	A	
BA00186	unknown	2R:10192693	+	Enhancer?	3	chr2R:11016473	CG11798	RB	intron	1	No	A	
BA00186	unknown	2R:10192693	+	Enhancer?	3	chr2R:11016473	CG11798	RC	intron	1	No	A	
BA00186	unknown	2R:10192693	+	Enhancer?	3	chr2R:11016473	CG11798	RD	intron	1	No	A	
BA00187	CG3157	2L:2965476	+	Protein?	3	chr2L:2972907	CG3157	RA	exon	1	No	A	
BA00193	CG2671	2L:19941	-	Enhancer?	3	chr2L:19941	CG2671	RB	exon	2	Yes	A	
BA00193	CG2671	2L:19941	-	Enhancer?	3	chr2L:19941	CG2671	RD	exon	2	No	A	
BA00193	CG2671	2L:19941	-	Enhancer?	3	chr2L:19941	CG2671	RE	exon	2	No	A	
BA00193	CG2671	2L:19941	-	Enhancer?	3	chr2L:19941	CG2671	RF	exon	3	No	A	
BA00195	CG11993	3R:4877731	+	Enhancer	3	chr3R:4877716	CG11993	RA	exon	2	No	A	
BA00204	CG6721	3L:9813107	-	Protein?	3	chr3L:9848678						A	
BA00205	CG17950	2R:16758221	+	Enhancer?	3	chr2R:17602175	CG17950	RA	intron	1	No	A	
BA00205	CG17950	2R:16758221	+	Enhancer?	3	chr2R:17602175	CG17950	RB	intron	2	No	A	
BA00207	CG5392	3L:14957006	-	Protein	3	chr3L:15001227	CG5392	RA	intron	2	Yes	A	A
BA00210	CG7228	2L:7986224	-	Enhancer?	3	chr2L:7993993	CG7228	RA	exon	1	No	A	
BA00210	CG7228	2L:7986224	-	Enhancer?	3	chr2L:7993993	CG7228	RB	intron	1	No	A	
BA00213	CG1065	3L:3794888	+	Protein?	3	chr3L:3814259	CG1065	RA	exon	1	No	A	
BA00219	CG8613	2R:9415998	+	Enhancer?	3	chr2R:10239777	CG8613	RA	exon	1	No	A	
BA00223	CG8443	2R:11250159	+	Novel?	3	chr2R:12073939						A							
BA00227	CG5535	3L:17805782	-	Enhancer?	3	chr3L:17850003						A	
BA00233	CG8962	X:15516489	-	Enhancer?	3	chrX:15679508	CG8962	RA	exon	1	No	A	
BA00233	CG8962	X:15516489	-	Enhancer?	3	chrX:15679508	CG8962	RB	exon	1	No	A	
BA00234	CG2637	2L:20704543	+	Enhancer?	3	chr2L:20734801						A	
BA00236	CG7524	3L:4603486	-	Enhancer?	3	chr3L:4625545	CG7524	RB	intron	1	No	A	
BA00236	CG7524	3L:4603486	-	Enhancer?	3	chr3L:4625545	CG7524	RC	intron	1	No	A	
BA00236	CG7524	3L:4603486	-	Enhancer?	3	chr3L:4625545	CG7524	RD	intron	1	No	A	
BA00236	CG7524	3L:4603486	-	Enhancer?	3	chr3L:4625545	CG7524	RE	intron	1	No	A	
BA00236	CG7524	3L:4603486	-	Enhancer?	3	chr3L:4625545	CG7524	RF	intron	1	No	A	
BA00238	CG2530	3R:912721	-	Enhancer?	3	chr3R:912724						A	
BA00239	CG10371	3R:19574287	+	Enhancer?	3	chr3R:19583630						A	
BA00240	unknown	X:6836944	-	Enhancer?	3	chrX:6990601	CG14425	RA	intron	1	No	A	
BA00240	unknown	X:6836944	-	Enhancer?	3	chrX:6990601	CG18350	RA	intron	2	No	A	
BA00240	unknown	X:6836944	-	Enhancer?	3	chrX:6990601	CG18350	RB	intron	1	No	A	
BA00240	unknown	X:6836944	-	Enhancer?	3	chrX:6990601	CG18350	RD	intron	1	No	A	
BA00240	unknown	X:6836944	-	Enhancer?	3	chrX:6990601	CG18350	RE	intron	2	No	A	
BA00240	unknown	X:6836944	-	Enhancer?	3	chrX:6990601	CG18350	RF	intron	1	No	A	
BA00240	unknown	X:6836944	-	Enhancer?	3	chrX:6990601	CG18350	RG	intron	2	No	A	
BA00240	unknown	X:6836944	-	Enhancer?	3	chrX:6990601	CG18350	RH	intron	1	No	A	
BA00240	unknown	X:6836944	-	Enhancer?	3	chrX:6990601	CG18350	RI	intron	1	No	A	
BA00240	unknown	X:6836944	-	Enhancer?	3	chrX:6990601	CG18350	RJ	intron	1	No	A	
BA00240	unknown	X:6836944	-	Enhancer?	3	chrX:6990601	CG18350	RK	intron	1	No	A	
BA00240	unknown	X:6836944	-	Enhancer?	3	chrX:6990601	CG18350	RL	intron	1	No	A	
BA00240	unknown	X:6836944	-	Enhancer?	3	chrX:6990601	CG18350	RM	intron	1	No	A	
BA00248	unknown	2L:8945283	-	Enhancer?	3	chr2L:8953052						A	
BA00253	CG10521	X:14433442	-	Protein	3	chrX:14596460	CG10521	RA	intron	3	Yes	A	A
BA00256	CG6963	3R:12099098	+	Enhancer?	3	chr3R:12099080	CG6963	RB	intron	1	No	A	
BA00256	CG6963	3R:12099098	+	Enhancer?	3	chr3R:12099080	CG6963	RD	intron	1	No	A	
BA00256	CG6963	3R:12099098	+	Enhancer?	3	chr3R:12099080	CG6963	RE	intron	1	No	A	
BA00256	CG6963	3R:12099098	+	Enhancer?	3	chr3R:12099080	CG6963	RF	intron	1	No	A	
BA00256	CG6963	3R:12099098	+	Enhancer?	3	chr3R:12099080	CG6963	RH	intron	1	No	A	
BA00275	CG31619	2L:21524594	+	Enhancer?	3	chr2L:21691473	CG31619	RA	intron	2	Yes	A	C
BA00275	CG31619	2L:21524594	+	Enhancer?	3	chr2L:21691473	CG31619	RB	intron	2	Yes	A	C
BA00275	CG31619	2L:21524594	+	Enhancer?	3	chr2L:21691473	CG31619	RC	intron	2	Yes	A	C
BA00280	CG2922	3R:1425189	-	Protein?	3	chr3R:1425192	CG2922	RA	intron	1	No	A	
BA00280	CG2922	3R:1425189	-	Protein?	3	chr3R:1425192	CG2922	RB	intron	2	No	A	
BA00280	CG2922	3R:1425189	-	Protein?	3	chr3R:1425192	CG2922	RC	intron	2	No	A	
BA00280	CG2922	3R:1425189	-	Protein?	3	chr3R:1425192	CG2922	RD	intron	1	No	A	
BA00280	CG2922	3R:1425189	-	Protein?	3	chr3R:1425192	CG2922	RE	exon	1	No	A	
BA00280	CG2922	3R:1425189	-	Protein?	3	chr3R:1425192	CG2922	RF	intron	1	No	A	
BA00280	CG2922	3R:1425189	-	Protein?	3	chr3R:1425192	CG2922	RG	intron	1	No	A	
CA06503	CG2216	3R:26202146	-	Protein	3	chr3R:26212780	CG2216	RA	intron	1	Yes	A	A
CA06503	CG2216	3R:26202146	-	Protein	3	chr3R:26212780	CG2216	RB	intron	2	Yes	A	A
CA06503	CG2216	3R:26202146	-	Protein	3	chr3R:26212780	CG2216	RC	intron	2	Yes	A	A
CA06503	CG2216	3R:26202146	-	Protein	3	chr3R:26212780	CG2216	RD	intron	2	Yes	A	A
CA06503	CG2216	3R:26202146	-	Protein	3	chr3R:26212780	CG2216	RE	intron	2	Yes	A	A
CA06505	CG12664	X:8874016	-	Enhancer?	3	chrX:9029065						A	
CA06506	CG31196	3R:14068977	+	Protein	3	chr3R:14068961	CG31196	RA	intron	1	Yes	A	A
CA06506	CG31196	3R:14068977	+	Protein	3	chr3R:14068961	CG31196	RB	intron	1	Yes	A	A
CA06506	CG31196	3R:14068977	+	Protein	3	chr3R:14068961	CG31196	RC	intron	1	Yes	A	A
CA06506	CG31196	3R:14068977	+	Protein	3	chr3R:14068961	CG31196	RD	intron	1	Yes	A	A
CA06507	CG9429	3R:5456174	-	Protein	3	chr3R:5456158	CG9429	RA	intron	2	Yes	A	A
CA06515	CG6382	2L:12424660	+	Protein	3	chr2L:12435789	CG6382	RA	intron	1	Yes	A	A
CA06517	unknown	3L:12473352	+	Protein	3	chr3L:12508905	CG10686	RA	intron	1	Yes	A	A
CA06523	unknown	2L:4993343	-	Protein	3	chr2L:5000772	CG33113	RB	intron	3	Yes	A	A
CA06523	unknown	2L:4993343	-	Protein	3	chr2L:5000772	CG33113	RE	intron	2	Yes	A	A
CA06523	unknown	2L:4993343	-	Protein	3	chr2L:5000772	CG33113	RF	intron	1	Yes	A	A
CA06526	CG6988	3L:15090448	-	Protein	3	chr3L:15134669	CG6988	RA	intron	1	Yes	A	A
CA06526	CG6988	3L:15090448	-	Protein	3	chr3L:15134669	CG6988	RB	intron	1	Yes	A	B
CA06531	CG11212	2R:1332410	-	Enhancer?	3	chr2R:2081450	CG11212	RA	intron	1	No	A	
CA06547	unknown	2L:4990386	-	Protein	3	chr2L:4997815	CG33113	RB	intron	3	Yes	A	A
CA06547	unknown	2L:4990386	-	Protein	3	chr2L:4997815	CG33113	RD	intron	2	Yes	A	A
CA06547	unknown	2L:4990386	-	Protein	3	chr2L:4997815	CG33113	RE	intron	2	Yes	A	A
CA06547	unknown	2L:4990386	-	Protein	3	chr2L:4997815	CG33113	RF	intron	1	Yes	A	A
CA06547	unknown	2L:4990386	-	Protein	3	chr2L:4997815	CG33113	RG	intron	1	Yes	A	A
CA06550	CG6027	3R:14919981	-	Enhancer?	3	chr3R:14919964	CG6027	RA	exon	1	No	A	
CA06555	CG11111	X:13492986	+	Enhancer?	3	chrX:13656360						A	
CA06556	CG6930	3R:7597428	-	Protein?	3	chr3R:7597410	CG6930	RB	intron	2	Yes	A	A
CA06556	CG6930	3R:7597428	-	Protein?	3	chr3R:7597410	CG6930	RC	intron	1	Yes	A	A
CA06569	CG12792	2R:893409	+	Enhancer?	3	chr2R:1642043	CG12792	RA	exon	1	No	A	
CA06573	CG9537	2L:6473076	+	Valid?	3	chr2L:6480860						A	
CA06574	CG32804	X:1828825	+	Enhancer?	3	chrX:1966086						A	
CA06581	CG16787	2R:19000947	-	Novel	3	chr2R:19844902	CG16787	RA	exon	1	No	A	
CA06586	CG5723	3L:22325231	-	Protein?	3	chr3L:22401053						A	
CA06588	CG5661	3L:12039414	-	Enhancer?	3	chr3L:12074967						A	
CA06594	CG4654	2R:8288507	+	Protein	3	chr2R:9111298	CG4654	RA	intron	1	Yes	A	A
CA06596	CG9638	3R:4066203	-	Enhancer?	3	chr3R:4066188	CG9638	RA	exon	1	No	A	
CA06596	CG9638	3R:4066203	-	Enhancer?	3	chr3R:4066188	CG9638	RB	exon	1	No	A	
CA06597	CG6827	3L:12106244	+	Protein	3	chr3L:12141797	CG6827	RA	intron	1	Yes	A	A
CA06597	CG6827	3L:12106244	+	Protein	3	chr3L:12141797	CG6827	RB	intron	1	Yes	A	A
CA06598	CG8103	3L:19826994	-	Protein	3	chr3L:19901556	CG32217	RA	intron	1	No	A	
CA06598	CG8103	3L:19826994	-	Protein	3	chr3L:19901556	CG8103	RA	intron	1	Yes	A	A
CA06598	CG8103	3L:19826994	-	Protein	3	chr3L:19901556	CG8103	RB	intron	1	Yes	A	A
CA06602	CG7540	3L:21426625	+	Enhancer?	3	chr3L:21502447	CG7540	RA	intron	1	No	A	
CA06603	CG8583	3L:7320817	+	Protein	3	chr3L:7354388	CG8583	RA	intron	1	Yes	A	A
CA06604	CG8443	2R:11251428	+	Protein	3	chr2R:12075208	CG8443	RA	intron	1	Yes	A	A
CA06606	CG15118	2R:14206392	-	Enhancer?	3	chr2R:15030177	CG15118	RC	intron	1	No	A	
CA06610	CG14648	3R:229230	+	Protein	3	chr3R:229231	CG14648	RA	intron	1	Yes	A	A
CA06610	CG14648	3R:229230	+	Protein	3	chr3R:229231	CG14648	RB	intron	1	Yes	A	A
CA06614	CG32479	3L:862670	+	Protein	3	chr3L:882041	CG32479	RA	intron	4	Yes	A	A
CA06615	CG18531	X:1212395	+	Enhancer?	3	chrX:1348991						A	
CA06616	unknown	2R:11920997	+	Protein	3	chr2R:12744777	CG5935	RA	intron	2	Yes	A	A
CA06616	unknown	2R:11920997	+	Protein	3	chr2R:12744777	CG5935	RB	intron	1	Yes	A	A
CA06616	unknown	2R:11920997	+	Protein	3	chr2R:12744777	CG5935	RC	intron	2	Yes	A	A
CA06616	unknown	2R:11920997	+	Protein	3	chr2R:12744777	CG5935	RD	intron	2	Yes	A	A
CA06618	CG10236	3L:6178224	-	Enhancer?	3	chr3L:6211795						A	
CA06621	CG9127	2L:6038194	-	Enhancer?	3	chr2L:6045979						A	
CA06627	CG6838	3L:22634503	-	Novel	3	chr3L:22710325	CG6838	RA	exon	2	No	A	
CA06627	CG6838	3L:22634503	-	Novel	3	chr3L:22710325	CG6838	RB	exon	1	No	A	
CA06627	CG6838	3L:22634503	-	Novel	3	chr3L:22710325	CG6838	RC	exon	2	No	A	
CA06627	CG6838	3L:22634503	-	Novel	3	chr3L:22710325	CG6838	RD	exon	1	No	A	
CA06637	CG18497	2L:160743	+	Enhancer?	3	chr2L:160743	CG18497	RA	intron	1	No	A	
CA06637	CG18497	2L:160743	+	Enhancer?	3	chr2L:160743	CG18497	RB	intron	1	No	A	
CA06641	unknown	3R:20035286	-	Protein	3	chr3R:20044629	CG31137	RA	intron	5	Yes	A	A
CA06641	unknown	3R:20035286	-	Protein	3	chr3R:20044629	CG31137	RB	intron	4	Yes	A	A
CA06641	unknown	3R:20035286	-	Protein	3	chr3R:20044629	CG31137	RC	intron	5	Yes	A	A
CA06641	unknown	3R:20035286	-	Protein	3	chr3R:20044629	CG31137	RE	intron	5	Yes	A	A
CA06641	unknown	3R:20035286	-	Protein	3	chr3R:20044629	CG31137	RF	intron	5	Yes	A	A
CA06642	CG6008	3R:14853120	+	Novel	3	chr3R:14853103	CG6008	RA	exon	1	No	A	
CA06644	CG32451	3L:22690629	+	Novel?	3	chr3L:22766451	CG32451	RB	intron	1	Yes	A	C
CA06644	CG32451	3L:22690629	+	Novel?	3	chr3L:22766451	CG32451	RD	intron	1	Yes	A	C
CA06657	CG9075	2L:5974726	+	Enhancer	3	chr2L:5982511	CG9075	RA	intron	1	Yes	A	B
CA06657	CG9075	2L:5974726	+	Enhancer	3	chr2L:5982511	CG9075	RC	intron	1	Yes	A	B
CA06658	CG2204	2R:5504911	+	Protein	3	chr2R:6331783	CG2204	RB	intron	2	Yes	A	A
CA06658	CG2204	2R:5504911	+	Protein	3	chr2R:6331783	CG2204	RC	intron	2	No	A	
CA06658	CG2204	2R:5504911	+	Protein	3	chr2R:6331783	CG2204	RD	intron	2	Yes	A	A
CA06658	CG2204	2R:5504911	+	Protein	3	chr2R:6331783	CG2204	RE	intron	2	Yes	A	A
CA06658	CG2204	2R:5504911	+	Protein	3	chr2R:6331783	CG2204	RF	intron	2	Yes	A	A
CA06658	CG2204	2R:5504911	+	Protein	3	chr2R:6331783	CG2204	RG	intron	2	Yes	A	A
CA06658	CG2204	2R:5504911	+	Protein	3	chr2R:6331783	CG2204	RH	intron	1	Yes	A	A
CA06660	CG6964	3L:8414152	+	Protein?	3	chr3L:8448542	CG6964	RA	intron	2	No	A	
CA06660	CG6964	3L:8414152	+	Protein?	3	chr3L:8448542	CG6964	RB	intron	2	No	A	
CA06660	CG6964	3L:8414152	+	Protein?	3	chr3L:8448542	CG6964	RC	intron	2	No	A	
CA06660	CG6964	3L:8414152	+	Protein?	3	chr3L:8448542	CG6964	RD	intron	2	No	A	
CA06666	CG32848	3R:14538246	+	Protein	3	chr3R:14538229	CG12345	RA	intron	1	Yes	A	A
CA06666	CG32848	3R:14538246	+	Protein	3	chr3R:14538229	CG12345	RB	intron	1	Yes	A	A
CA06666	CG32848	3R:14538246	+	Protein	3	chr3R:14538229	CG32848	RA	exon	2	No	A	
CA06672	CG7717	3R:14568673	-	Enhancer?	3	chr3R:14568656	CG7717	RA	intron	1	Yes	A	B
CA06672	CG7717	3R:14568673	-	Enhancer?	3	chr3R:14568656	CG7717	RB	intron	1	Yes	A	B
CA06678	CG10367	3R:19549710	+	Novel	3	chr3R:19559053	CG10367	RA	exon	1	No	A	
CA06683	CG2621	X:2399478	+	Protein	3	chrX:2536739	CG2621	RA	intron	2	Yes	A	A
CA06683	CG2621	X:2399478	+	Protein	3	chrX:2536739	CG2621	RB	intron	2	Yes	A	A
CA06683	CG2621	X:2399478	+	Protein	3	chrX:2536739	CG2621	RC	intron	2	Yes	A	A
CA06683	CG2621	X:2399478	+	Protein	3	chrX:2536739	CG2621	RE	intron	2	Yes	A	A
CA06683	CG2621	X:2399478	+	Protein	3	chrX:2536739	CG2621	RF	intron	2	Yes	A	A
CA06683	CG2621	X:2399478	+	Protein	3	chrX:2536739	CG2621	RH	intron	2	Yes	A	A
CA06683	CG2621	X:2399478	+	Protein	3	chrX:2536739	CG2621	RI	intron	3	Yes	A	A
CA06683	CG2621	X:2399478	+	Protein	3	chrX:2536739	CG2621	RJ	intron	4	Yes	A	A
CA06684	unknown	X:9292320	-	Protein	3	chrX:9447369	CG32701	RA	intron	1	Yes	A	A
CA06686	CG31012	3R:26629988	+	Protein	3	chr3R:26640622	CG31012	RC	intron	1	Yes	A	A
CA06688	CG7272	3L:15449800	+	Enhancer?	3	chr3L:15494021						A	
CA06691	CG4799	2L:10049356	+	Enhancer?	3	chr2L:10056947	CG4799	RA	exon	1	No	A	
CA06700	CG10652	2L:18987344	-	Enhancer?	3	chr2L:19009261						A	
CA06708	CG3161	2R:1692393	-	Protein	3	chr2R:2518996	CG3161	RA	intron	2	Yes	A	A
CA06708	CG3161	2R:1692393	-	Protein	3	chr2R:2518996	CG3161	RB	intron	2	Yes	A	A
CA06708	CG3161	2R:1692393	-	Protein	3	chr2R:2518996	CG3161	RC	intron	1	Yes	A	A
CA06708	CG3161	2R:1692393	-	Protein	3	chr2R:2518996	CG3161	RD	intron	2	Yes	A	A
CA06710	CG30015	2R:5939480	-	Enhancer	3	chr2R:6762256						A	
CA06715	CG17625	3R:18502833	+	Novel	3	chr3R:18512177						A	
CA06718	CG17716	2R:8687714	+	Enhancer?	3	chr2R:9510505						A	
CA06729	CG15435	2L:4452535	+	Enhancer	3	chr2L:4459966	CG15435	RA	exon	1	No	A	
CA06735	CG8947	3L:13943093	+	Protein	3	chr3L:13987313						A	
CA06736	CG6030	3R:14919974	+	Enhancer	3	chr3R:14919957						A	
CA06740	CG2003	3R:27800838	+	Protein?	3	chr3R:27811472	CG2003	RA	intron	1	No	A	
CA06742	CG10579	3L:3550028	+	Protein	3	chr3L:3569399	CG10579	RA	intron	4	Yes	A	A
CA06742	CG10579	3L:3550028	+	Protein	3	chr3L:3569399	CG10579	RB	intron	3	Yes	A	A
CA06742	CG10579	3L:3550028	+	Protein	3	chr3L:3569399	CG10579	RC	intron	3	Yes	A	A
CA06742	CG10579	3L:3550028	+	Protein	3	chr3L:3569399	CG10579	RD	intron	2	Yes	A	A
CA06742	CG10579	3L:3550028	+	Protein	3	chr3L:3569399	CG10579	RE	intron	3	Yes	A	A
CA06742	CG10579	3L:3550028	+	Protein	3	chr3L:3569399	CG10579	RF	intron	2	Yes	A	A
CA06742	CG10579	3L:3550028	+	Protein	3	chr3L:3569399	CG10579	RG	intron	3	Yes	A	A
CA06742	CG10579	3L:3550028	+	Protein	3	chr3L:3569399	CG10579	RH	intron	2	Yes	A	A
CA06742	CG10579	3L:3550028	+	Protein	3	chr3L:3569399	CG10579	RI	intron	4	Yes	A	A
CA06742	CG10579	3L:3550028	+	Protein	3	chr3L:3569399	CG10579	RJ	intron	2	Yes	A	A
CA06742	CG10579	3L:3550028	+	Protein	3	chr3L:3569399	CG10579	RK	intron	3	Yes	A	A
CA06743	CG10072	3L:6924308	-	Enhancer?	3	chr3L:6957879	CG10072	RA	exon	1	No	A	
CA06744	CG1915	3L:2088222	-	Protein	3	chr3L:2107593	CG1915	RA	intron	2	Yes	A	A
CA06744	CG1915	3L:2088222	-	Protein	3	chr3L:2107593	CG1915	RC	intron	2	Yes	A	A
CA06750	CG2151	X:7982572	+	Protein	3	chrX:8137659	CG2151	RA	intron	1	Yes	A	A
CA06750	CG2151	X:7982572	+	Protein	3	chrX:8137659	CG2151	RB	exon	1	No	A	
CA06762	CG31163	3L:17948409	+	Novel	3	chr3L:17992630						A	
CA06769	CG10160	3L:6222605	-	Novel	3	chr3L:6256176						A	
CA06772	CG32560	X:17469395	+	Protein	3	chrX:17632469	CG32560	RA	intron	3	Yes	A	A
CA06772	CG32560	X:17469395	+	Protein	3	chrX:17632469	CG32560	RB	intron	4	Yes	A	A
CA06773	unknown	3L:16756636	+	Enhancer?	3	chr3L:16800856						A	
CA06776	CG6998	X:4425942	+	Novel	3	chrX:4579362						A	
CA06777	unknown	3R:25589648	+	Enhancer	3	chr3R:25600282	CG33956	RA	intron	1	Yes	A	C
CA06777	unknown	3R:25589648	+	Enhancer	3	chr3R:25600282	CG33956	RD	intron	1	Yes	A	C
CA06791	CG5654	3L:12081714	-	Protein	3	chr3L:12117267	CG5654	RA	intron	1	Yes	A	A
CA06801	CG3036	2L:4886726	+	Protein	3	chr2L:4894157	CG3036	RA	intron	2	Yes	A	A
CA06810	CG31012	3R:26635403	+	Protein	3	chr3R:26646037	CG31012	RC	intron	4	Yes	A	A
CA06810	CG31012	3R:26635403	+	Protein	3	chr3R:26646037	CG31012	RD	intron	1	Yes	A	A
CA06811	unknown	2R:9018702	+	Enhancer	3	chr2R:9841493						A	
CA06821	CG6197	2R:8657515	+	Enhancer?	3	chr2R:9480306						A	
CA06844	CG11138	X:12309197	-	Protein	3	chrX:12472570	CG11138	RC	intron	1	Yes	A	A
CA06850	CG10844	2R:3921099	+	Enhancer?	3	chr2R:4747857						A	
CA06869	CG32365	3L:7828564	+	Enhancer?	3	chr3L:7862135						A	
CA06872	CG7917	3R:25820297	+	Protein	3	chr3R:25830931	CG7917	RA	intron	1	Yes	A	A
CA06882	CG10580	3L:20866918	-	Enhancer?	3	chr3L:20942742						A	
CA06886	CG8938	2R:12161123	-	Enhancer?	3	chr2R:12984903	CG8938	RB	exon	1	No	A	
CA06886	CG8938	2R:12161123	-	Enhancer?	3	chr2R:12984903	CG8938	RC	exon	1	No	A	
CA06887	CG7070	3R:18185432	+	Enhancer?	3	chr3R:18194468	CG7070	RB	intron	1	No	A	
CA06888	CG9325	2R:14487794	-	Enhancer?	3	chr2R:15311579	CG9325	RA	intron	1	No	A	
CA06888	CG9325	2R:14487794	-	Enhancer?	3	chr2R:15311579	CG9325	RB	intron	1	No	A	
CA06888	CG9325	2R:14487794	-	Enhancer?	3	chr2R:15311579	CG9325	RC	intron	1	No	A	
CA06888	CG9325	2R:14487794	-	Enhancer?	3	chr2R:15311579	CG9325	RD	intron	1	No	A	
CA06888	CG9325	2R:14487794	-	Enhancer?	3	chr2R:15311579	CG9325	RE	exon	1	No	A	
CA06888	CG9325	2R:14487794	-	Enhancer?	3	chr2R:15311579	CG9325	RF	exon	1	No	A	
CA06890	CG15375	X:3841647	+	Enhancer?	3	chrX:3995064						A	
CA06914	CG6671	2R:9018842	-	Protein	3	chr2R:9841633	CG6671	RA	intron	2	Yes	A	A
CA06914	CG6671	2R:9018842	-	Protein	3	chr2R:9841633	CG6671	RC	intron	3	Yes	A	A
CA06919	CG2922	3R:1425918	-	Protein?	3	chr3R:1425921	CG2922	RA	intron	1	No	A	
CA06919	CG2922	3R:1425918	-	Protein?	3	chr3R:1425921	CG2922	RB	exon	2	No	A	
CA06919	CG2922	3R:1425918	-	Protein?	3	chr3R:1425921	CG2922	RC	intron	1	No	A	
CA06919	CG2922	3R:1425918	-	Protein?	3	chr3R:1425921	CG2922	RD	exon	1	No	A	
CA06919	CG2922	3R:1425918	-	Protein?	3	chr3R:1425921	CG2922	RF	intron	1	No	A	
CA06919	CG2922	3R:1425918	-	Protein?	3	chr3R:1425921	CG2922	RG	intron	1	No	A	
CA06921	CG9983	3R:24416404	+	Protein	3	chr3R:24427038	CG9983	RA	intron	2	Yes	A	A
CA06921	CG9983	3R:24416404	+	Protein	3	chr3R:24427038	CG9983	RB	intron	2	Yes	A	A
CA06921	CG9983	3R:24416404	+	Protein	3	chr3R:24427038	CG9983	RC	intron	2	Yes	A	A
CA06921	CG9983	3R:24416404	+	Protein	3	chr3R:24427038	CG9983	RD	intron	2	Yes	A	A
CA06921	CG9983	3R:24416404	+	Protein	3	chr3R:24427038	CG9983	RE	intron	2	Yes	A	A
CA06921	CG9983	3R:24416404	+	Protein	3	chr3R:24427038	CG9983	RF	intron	2	Yes	A	A
CA06922	CG14816	X:1630311	-	Enhancer?	3	chrX:1767572						A	
CA06924	unknown	2R:5363506	+	Protein	3	chr2R:6190378	CG18408	RA	intron	7	Yes	A	A
CA06924	unknown	2R:5363506	+	Protein	3	chr2R:6190378	CG18408	RB	intron	6	Yes	A	A
CA06924	unknown	2R:5363506	+	Protein	3	chr2R:6190378	CG18408	RC	intron	13	Yes	A	A
CA06924	unknown	2R:5363506	+	Protein	3	chr2R:6190378	CG18408	RD	intron	1	Yes	A	A
CA06924	unknown	2R:5363506	+	Protein	3	chr2R:6190378	CG18408	RF	intron	12	Yes	A	A
CA06924	unknown	2R:5363506	+	Protein	3	chr2R:6190378	CG18408	RG	intron	7	Yes	A	A
CA06924	unknown	2R:5363506	+	Protein	3	chr2R:6190378	CG18408	RH	intron	7	Yes	A	A
CA06924	unknown	2R:5363506	+	Protein	3	chr2R:6190378	CG18408	RI	intron	9	Yes	A	A
CA06924	unknown	2R:5363506	+	Protein	3	chr2R:6190378	CG18408	RJ	intron	8	Yes	A	A
CA06926	CG5059	3L:20435180	-	Protein	3	chr3L:20509742	CG5059	RA	intron	1	Yes	A	A
CA06926	CG5059	3L:20435180	-	Protein	3	chr3L:20509742	CG5059	RB	intron	1	Yes	A	A
CA06926	CG5059	3L:20435180	-	Protein	3	chr3L:20509742	CG5059	RC	intron	1	No	A	
CA06926	CG5059	3L:20435180	-	Protein	3	chr3L:20509742	CG5059	RD	intron	1	No	A	
CA06929	CG14855	3R:10625082	+	Enhancer?	3	chr3R:10625064	CG14856	RA	exon	1	Yes	A	
CA06937	CG3947	3L:20696364	-	Novel	3	chr3L:20771447						A	
CA06938	CG8772	2R:7734935	-	Enhancer?	3	chr2R:8557727	CG8776	RD	intron	2	No	A	
CA06960	unknown	3R:7392206	-	Protein	3	chr3R:7392188	CG6782	RD	intron	1	No	A	
CA06960	unknown	3R:7392206	-	Protein	3	chr3R:7392188	CG6783	RA	intron	1	No	A	
CA06960	unknown	3R:7392206	-	Protein	3	chr3R:7392188	CG6783	RB	intron	1	Yes	A	A
CA06960	unknown	3R:7392206	-	Protein	3	chr3R:7392188	CG6783	RC	intron	1	Yes	A	A
CA06961	CG12085	3L:1481920	-	Protein	3	chr3L:1501291	CG12085	RA	intron	2	Yes	A	A
CA06961	CG12085	3L:1481920	-	Protein	3	chr3L:1501291	CG12085	RB	intron	2	No	A	
CA06961	CG12085	3L:1481920	-	Protein	3	chr3L:1501291	CG12085	RC	intron	3	No	A	
CA06961	CG12085	3L:1481920	-	Protein	3	chr3L:1501291	CG12085	RD	intron	3	No	A	
CA06962	CG15095	2R:13864847	-	Protein	3	chr2R:14688632	CG15095	RA	intron	1	Yes	A	A
CA06962	CG15095	2R:13864847	-	Protein	3	chr2R:14688632	CG15095	RB	intron	2	Yes	A	A
CA06966	CG5547	2L:13192114	+	Enhancer?	3	chr2L:13203244						A	
CA06971	CG6683	3L:8473519	-	Protein?	3	chr3L:8507909	CG6683	RA	exon	1	Yes	A	
CA06976	CG12120	X:8962252	-	Enhancer	3	chrX:9117301						A	
CA06978	unknown	2L:8096624	+	Protein	3	chr2L:8104393	CG31605	RA	intron	2	Yes	A	A
CA06978	unknown	2L:8096624	+	Protein	3	chr2L:8104393	CG31605	RB	intron	2	Yes	A	A
CA06978	unknown	2L:8096624	+	Protein	3	chr2L:8104393	CG31605	RC	intron	2	Yes	A	A
CA06978	unknown	2L:8096624	+	Protein	3	chr2L:8104393	CG31605	RD	intron	2	Yes	A	A
CA06978	unknown	2L:8096624	+	Protein	3	chr2L:8104393	CG31605	RE	intron	2	Yes	A	A
CA06978	unknown	2L:8096624	+	Protein	3	chr2L:8104393	CG31605	RF	intron	3	Yes	A	A
CA06978	unknown	2L:8096624	+	Protein	3	chr2L:8104393	CG31605	RG	intron	4	Yes	A	A
CA06978	unknown	2L:8096624	+	Protein	3	chr2L:8104393	CG31605	RH	intron	2	Yes	A	A
CA06978	unknown	2L:8096624	+	Protein	3	chr2L:8104393	CG31605	RI	intron	2	Yes	A	A
CA06982	CG16788	3R:5377046	+	Enhancer?	3	chr3R:5377030						A	
CA06983	CG4466	3L:9342697	+	Novel	3	chr3L:9377087						A	
CA06984	CG6072	3R:12015447	+	Enhancer?	3	chr3R:12015429	CG6072	RA	intron	1	No	A	
CA06989	CG4700	2R:11588105	+	Protein	3	chr2R:12411885	CG4700	RA	intron	2	Yes	A	A
CA06989	CG4700	2R:11588105	+	Protein	3	chr2R:12411885	CG4700	RB	intron	2	Yes	A	A
CA06989	CG4700	2R:11588105	+	Protein	3	chr2R:12411885	CG4700	RC	intron	2	Yes	A	A
CA06989	CG4700	2R:11588105	+	Protein	3	chr2R:12411885	CG4700	RD	intron	1	Yes	A	A
CA06990	CG31776	2L:3462595	+	Enhancer	3	chr2L:3470026						A	
CA06996	CG14656	3R:623948	-	Protein	3	chr3R:623949	CG14656	RA	intron	2	Yes	A	A
CA06997	CG10151	2R:9820043	-	Enhancer?	3	chr2R:10643822						A	
CA06999	CG10975	3L:12692493	+	Protein?	3	chr3L:12728046						A	
CA07000	CG1977	3L:1774960	-	Enhancer?	3	chr3L:1794331	CG1977	RA	intron	1	No	A	
CA07000	CG1977	3L:1774960	-	Enhancer?	3	chr3L:1794331	CG32315	RA	intron	1	No	A	
CA07002	CG7439	3L:15503221	+	Protein	3	chr3L:15547442	CG7439	RB	exon	2	Yes	A	
CA07002	CG7439	3L:15503221	+	Protein	3	chr3L:15547442	CG7439	RC	exon	1	Yes	A	
CA07004	CG16707	3L:9672249	+	Protein	3	chr3L:9707820	CG16707	RA	intron	1	Yes	A	A
CA07004	CG16707	3L:9672249	+	Protein	3	chr3L:9707820	CG16707	RB	intron	2	Yes	A	A
CA07004	CG16707	3L:9672249	+	Protein	3	chr3L:9707820	CG16707	RC	intron	2	Yes	A	A
CA07004	CG16707	3L:9672249	+	Protein	3	chr3L:9707820	CG16707	RD	intron	1	Yes	A	A
CA07005	CG14050	X:2082651	-	Enhancer?	3	chrX:2219912						A	
CA07010	CG10246	2R:9945164	-	Protein?	3	chr2R:10768943						A	
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RA	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RAA	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RAB	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RAC	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RB	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RC	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RD	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RE	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RF	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RG	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RH	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RI	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RJ	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RK	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RL	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RM	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RN	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RO	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RP	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RQ	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RR	intron	4	Yes	A	A
CA07012	unknown	3R:17191305	-	Protein	3	chr3R:17200341	CG32491	RS	intron	4	Yes	A	A
CA07017	CG5414	3L:16049280	+	Enhancer?	3	chr3L:16093501	CG5414	RA	exon	1	Yes	A	
CA07019	CG15099	2R:13910224	-	Enhancer?	3	chr2R:14734009						A	
CA07023	CG1655	X:10599436	-	Novel	3	chrX:10751530						A	
CA07026	CG12296	3L:10966537	-	Enhancer?	3	chr3L:11002105						A	
CA07027	CG12306	3L:20229086	+	Enhancer	3	chr3L:20303648	CG12306	RA	intron	1	Yes	A	C
CA07027	CG12306	3L:20229086	+	Enhancer	3	chr3L:20303648	CG12306	RB	intron	1	Yes	A	C
CA07030	CG10120	3R:8545718	-	Novel	3	chr3R:8545699	CG10120	RA	exon	2	Yes	A	
CA07030	CG10120	3R:8545718	-	Novel	3	chr3R:8545699	CG10120	RB	exon	2	Yes	A	
CA07035	unknown	3L:14223089	+	Enhancer?	3	chr3L:14267309						A	
CA07038	CG3166	2L:2168111	-	Enhancer	3	chr2L:2175544	CG3166	RB	intron	1	No	A	
CA07051	CG9057	X:14806588	-	Protein	3	chrX:14969607	CG9057	RA	intron	1	Yes	A	A
CA07051	CG9057	X:14806588	-	Protein	3	chrX:14969607	CG9057	RB	intron	1	Yes	A	A
CA07051	CG9057	X:14806588	-	Protein	3	chrX:14969607	CG9057	RC	intron	1	Yes	A	A
CA07054	CG5161	3L:16080991	-	Enhancer?	3	chr3L:16125212						A	
CA07062	CG5733	2R:13231071	-	Enhancer	3	chr2R:14054842						A	
CA07063	CG11238	3L:22658650	-	Protein?	3	chr3L:22734472	CG11238	RA	exon	1	No	A	
CA07069	CG9238	3L:14499896	-	Enhancer?	3	chr3L:14544116						A	
CA07071	CG10279	3R:1833556	-	Enhancer?	3	chr3R:1833559	CG10279	RA	intron	1	Yes	A	B
CA07071	CG10279	3R:1833556	-	Enhancer?	3	chr3R:1833559	CG10279	RB	intron	1	No	A	
CA07071	CG10279	3R:1833556	-	Enhancer?	3	chr3R:1833559	CG10279	RC	intron	2	No	A	
CA07071	CG10279	3R:1833556	-	Enhancer?	3	chr3R:1833559	CG10279	RD	intron	2	Yes	A	B
CA07071	CG10279	3R:1833556	-	Enhancer?	3	chr3R:1833559	CG10279	RE	intron	1	No	A	
CA07073	CG3379	3R:10451868	+	Enhancer?	3	chr3R:10451850	CG3379	RA	exon	2	Yes	A	
CA07073	CG3379	3R:10451868	+	Enhancer?	3	chr3R:10451850	CG3379	RB	exon	2	Yes	A	
CA07073	CG3379	3R:10451868	+	Enhancer?	3	chr3R:10451850	CG3379	RC	exon	1	Yes	A	
CA07081	CG3371	3L:666163	-	Enhancer?	3	chr3L:685534	CG3371	RA	exon	1	No	A	
CA07086	CG9553	2L:5972595	-	Enhancer	3	chr2L:5980380	CG9553	RA	intron	1	No	A	
CA07086	CG9553	2L:5972595	-	Enhancer	3	chr2L:5980380	CG9553	RC	exon	1	No	A	
CA07086	CG9553	2L:5972595	-	Enhancer	3	chr2L:5980380	CG9553	RD	intron	1	No	A	
CA07096	CG9148	3L:1279364	+	Protein?	3	chr3L:1298735	CG9148	RA	exon	1	Yes	A	
CA07096	CG9148	3L:1279364	+	Protein?	3	chr3L:1298735	CG9148	RC	exon	1	Yes	A	
CA07101	CG5411	2R:18710514	+	Protein	3	chr2R:19554469	CG5411	RA	intron	3	Yes	A	A
CA07101	CG5411	2R:18710514	+	Protein	3	chr2R:19554469	CG5411	RE	intron	4	Yes	A	A
CA07108	CG4422	2L:9486022	-	Protein	3	chr2L:9493793	CG4422	RA	intron	1	Yes	A	A
CA07109	CG10746	2L:20063184	-	Novel	3	chr2L:20085107						A	
CA07111	CG14938	2L:11795553	-	Enhancer?	3	chr2L:11806682	CG14938	RA	intron	1	No	A	
CA07111	CG14938	2L:11795553	-	Enhancer?	3	chr2L:11806682	CG14938	RB	intron	1	No	A	
CA07111	CG14938	2L:11795553	-	Enhancer?	3	chr2L:11806682	CG14938	RC	intron	1	No	A	
CA07111	CG14938	2L:11795553	-	Enhancer?	3	chr2L:11806682	CG14938	RD	intron	1	No	A	
CA07113	CG5838	2L:9959405	-	Protein?	3	chr2L:9966996	CG5838	RA	exon	1	No	A	
CA07122	unknown	3L:20944434	-	Enhancer?	3	chr3L:21020258	CG9936	RC	intron	1	No	A	
CA07122	unknown	3L:20944434	-	Enhancer?	3	chr3L:21020258	CG9936	RD	exon	1	No	A	
CA07122	unknown	3L:20944434	-	Enhancer?	3	chr3L:21020258	CG9936	RE	exon	1	No	A	
CA07123	CG32030	3L:8725151	+	Enhancer?	3	chr3L:8759541						A	
CA07125	CG18405	2L:8584770	+	Protein	3	chr2L:8592539	CG18405	RA	intron	3	Yes	A	A
CA07125	CG18405	2L:8584770	+	Protein	3	chr2L:8592539	CG18405	RB	intron	3	Yes	A	A
CA07125	CG18405	2L:8584770	+	Protein	3	chr2L:8592539	CG18405	RC	intron	3	Yes	A	A
CA07128	CG7995	3L:1719649	+	Protein?	3	chr3L:1739020	CG7995	RC	intron	1	No	A	
CA07128	CG7995	3L:1719649	+	Protein?	3	chr3L:1739020	CG7995	RE	intron	1	No	A	
CA07130	CG15792	2R:20055649	-	Enhancer?	3	chr2R:20899602						A	
CA07132	CG6310	3L:11028073	-	Novel	3	chr3L:11063641						A	
CA07134	CG1770	X:13009476	-	Protein	3	chrX:13172850	CG1770	RA	intron	2	Yes	A	A
CA07134	CG1770	X:13009476	-	Protein	3	chrX:13172850	CG1770	RC	intron	1	Yes	A	A
CA07138	CG5730	3R:16890087	+	Enhancer?	3	chr3R:16890070						A	
CA07153	CG6117	3L:15904072	-	Protein	3	chr3L:15948293						A	
CA07165	CG6015	3R:17851113	-	Protein?	3	chr3R:17860149						A	
CA07168	CG3881	2L:9609064	+	Protein	3	chr2L:9616835	CG3881	RA	intron	1	Yes	A	A
CA07171	CG4898	3R:11117085	+	Enhancer?	3	chr3R:11117067	CG4898	RA	exon	1	No	A	
CA07171	CG4898	3R:11117085	+	Enhancer?	3	chr3R:11117067	CG4898	RB	intron	3	Yes	A	C
CA07171	CG4898	3R:11117085	+	Enhancer?	3	chr3R:11117067	CG4898	RC	intron	1	Yes	A	C
CA07171	CG4898	3R:11117085	+	Enhancer?	3	chr3R:11117067	CG4898	RD	intron	3	Yes	A	C
CA07171	CG4898	3R:11117085	+	Enhancer?	3	chr3R:11117067	CG4898	RE	intron	5	Yes	A	C
CA07171	CG4898	3R:11117085	+	Enhancer?	3	chr3R:11117067	CG4898	RF	intron	3	Yes	A	C
CA07171	CG4898	3R:11117085	+	Enhancer?	3	chr3R:11117067	CG4898	RG	intron	3	Yes	A	C
CA07171	CG4898	3R:11117085	+	Enhancer?	3	chr3R:11117067	CG4898	RH	intron	3	Yes	A	C
CA07171	CG4898	3R:11117085	+	Enhancer?	3	chr3R:11117067	CG4898	RI	intron	2	Yes	A	C
CA07171	CG4898	3R:11117085	+	Enhancer?	3	chr3R:11117067	CG4898	RJ	intron	3	Yes	A	C
CA07171	CG4898	3R:11117085	+	Enhancer?	3	chr3R:11117067	CG4898	RK	intron	3	Yes	A	C
CA07171	CG4898	3R:11117085	+	Enhancer?	3	chr3R:11117067	CG4898	RL	intron	3	Yes	A	C
CA07172	CG7554	3L:15648867	-	Protein?	3	chr3L:15693088						A	
CA07176	CG5174	2R:13485507	+	Protein	3	chr2R:14309292	CG5174	RA	intron	1	Yes	A	A
CA07176	CG5174	2R:13485507	+	Protein	3	chr2R:14309292	CG5174	RG	intron	1	Yes	A	A
CA07176	CG5174	2R:13485507	+	Protein	3	chr2R:14309292	CG5174	RH	intron	1	Yes	A	A
CA07176	CG5174	2R:13485507	+	Protein	3	chr2R:14309292	CG5174	RI	intron	1	Yes	A	A
CA07176	CG5174	2R:13485507	+	Protein	3	chr2R:14309292	CG5174	RJ	intron	1	Yes	A	A
CA07176	CG5174	2R:13485507	+	Protein	3	chr2R:14309292	CG5174	RK	intron	1	Yes	A	A
CA07177	CG8920	2R:15384238	+	Enhancer	3	chr2R:16208031	CG8920	RA	exon	1	No	A	
CA07177	CG8920	2R:15384238	+	Enhancer	3	chr2R:16208031	CG8920	RB	intron	2	Yes	A	C
CA07177	CG8920	2R:15384238	+	Enhancer	3	chr2R:16208031	CG8920	RC	intron	2	Yes	A	C
CA07180	CG7966	3R:8877823	-	Protein?	3	chr3R:8877804						A	
CA07185	unknown	2R:5331863	+	Novel	3	chr2R:6158735	CG18408	RI	intron	3	Yes	A	A
CA07206	CG15142	2L:17475533	-	Novel	3	chr2L:17497450						A	
CA07211	unknown	2L:1120760	-	Protein	3	chr2L:1119094	CG4710	RA	exon	1	No	A	
CA07211	unknown	2L:1120760	-	Protein	3	chr2L:1119094	CG4710	RB	intron	2	Yes	A	A
CA07234	CG12560	2L:8001726	-	Enhancer	3	chr2L:8009495						A	
CA07241	CG12070	3R:26703905	-	Protein	3	chr3R:26714539	CG12070	RA	intron	1	Yes	A	A
CA07241	CG12070	3R:26703905	-	Protein	3	chr3R:26714539	CG12070	RB	exon	1	No	A	
CA07245	CG17681	2L:18120085	+	Enhancer?	3	chr2L:18142002						A	
CA07247	CG3997	2R:19106394	-	Enhancer?	3	chr2R:19950349						A	
CA07249	CG3836	3L:14358459	-	Protein	3	chr3L:14402679	CG3836	RA	intron	1	Yes	A	A
CA07251	CG14561	3L:21983140	+	Novel	3	chr3L:22058962						A	
CA07252	unknown	3L:14706679	-	Enhancer	3	chr3L:14750899	CG33261	RA	exon	1	No	A	
CA07252	unknown	3L:14706679	-	Enhancer	3	chr3L:14750899	CG33261	RB	intron	1	No	A	
CA07252	unknown	3L:14706679	-	Enhancer	3	chr3L:14750899	CG33261	RC	intron	1	No	A	
CA07252	unknown	3L:14706679	-	Enhancer	3	chr3L:14750899	CG33261	RD	exon	1	No	A	
CA07252	unknown	3L:14706679	-	Enhancer	3	chr3L:14750899	CG33261	RE	exon	1	No	A	
CA07252	unknown	3L:14706679	-	Enhancer	3	chr3L:14750899	CG33261	RF	intron	2	No	A	
CA07252	unknown	3L:14706679	-	Enhancer	3	chr3L:14750899	CG33261	RG	intron	1	No	A	
CA07252	unknown	3L:14706679	-	Enhancer	3	chr3L:14750899	CG33261	RH	intron	1	No	A	
CA07252	unknown	3L:14706679	-	Enhancer	3	chr3L:14750899	CG33261	RI	intron	1	No	A	
CA07254	CG7729	3L:16973158	+	Novel	3	chr3L:17017378						A	
CA07256	CG3637	3R:16890971	-	Protein?	3	chr3R:16890954						A	
CA07265	CG16717	3L:9636013	+	Protein?	3	chr3L:9671584						A	
CA07287	CG1440	X:8176612	+	Protein	3	chrX:8331699	CG1440	RA	intron	1	Yes	A	A
CA07301	CG2637	2L:20705401	+	Protein	3	chr2L:20735659	CG2637	RA	intron	2	Yes	A	A
CA07307	CG10130	2R:9682531	+	Enhancer?	3	chr2R:10506310	CG10130	RA	exon	1	No	A	
CA07322	CG31363	3R:7445610	-	Novel	3	chr3R:7445592	CG31363	RA	exon	1	No	A	
CA07322	CG31363	3R:7445610	-	Novel	3	chr3R:7445592	CG31363	RD	exon	1	No	A	
CA07322	CG31363	3R:7445610	-	Novel	3	chr3R:7445592	CG31363	RH	exon	1	No	A	
CA07329	CG5789	3R:20360306	-	Enhancer?	3	chr3R:20369649						A	
CA07330	CG5009	2R:12824674	+	Protein?	3	chr2R:13648454	CG5009	RA	exon	1	No	A	
CA07331	CG6238	3R:20761360	-	Enhancer?	3	chr3R:20770703						A	
CA07332	CG6854	3L:15055134	+	Protein	3	chr3L:15099355	CG6854	RA	intron	1	No	A	
CA07332	CG6854	3L:15055134	+	Protein	3	chr3L:15099355	CG6854	RB	intron	1	No	A	
CA07332	CG6854	3L:15055134	+	Protein	3	chr3L:15099355	CG6854	RC	intron	1	Yes	A	A
CA07333	CG13598	3R:19739436	-	Novel	3	chr3R:19748779						A	
CA07336	CG3361	3R:23096875	-	Enhancer?	3	chr3R:23107510	CG3361	RA	exon	1	No	A	
CA07338	unknown	2R:9205078	-	Enhancer?	3	chr2R:10027812	CG30483	RA	exon	1	No	A	
CA07340	CG9847	2R:16541059	-	Protein	3	chr2R:17385013	CG9847	RB	intron	1	Yes	A	A
CA07346	unknown	3R:26390057	+	Protein	3	chr3R:26400691	CG1539	RA	intron	5	Yes	A	A
CA07346	unknown	3R:26390057	+	Protein	3	chr3R:26400691	CG1539	RB	intron	5	Yes	A	A
CA07346	unknown	3R:26390057	+	Protein	3	chr3R:26400691	CG1539	RC	intron	6	Yes	A	A
CA07346	unknown	3R:26390057	+	Protein	3	chr3R:26400691	CG1539	RD	intron	5	Yes	A	A
CA07346	unknown	3R:26390057	+	Protein	3	chr3R:26400691	CG1539	RE	intron	6	Yes	A	A
CA07346	unknown	3R:26390057	+	Protein	3	chr3R:26400691	CG1539	RF	intron	6	Yes	A	A
CA07346	unknown	3R:26390057	+	Protein	3	chr3R:26400691	CG1539	RG	intron	7	Yes	A	B
CA07352	CG8552	2L:8151811	-	Protein	3	chr2L:8159580						A	
CA07356	CG17161	2L:16663675	+	Enhancer?	3	chr2L:16685591	CG17161	RA	exon	1	No	A	
CA07356	CG17161	2L:16663675	+	Enhancer?	3	chr2L:16685591	CG17161	RB	intron	1	No	A	
CA07356	CG17161	2L:16663675	+	Enhancer?	3	chr2L:16685591	CG17161	RC	intron	2	No	A	
CA07359	CG6643	3R:20360314	+	Enhancer?	3	chr3R:20369657						A	
CA07367	CG8776	2R:7735002	-	Enhancer?	3	chr2R:8557794	CG8776	RD	intron	2	No	A	
CA07369	CG11109	3L:22789315	+	Enhancer?	3	chr3L:22865137						A	
CA07385	CG2087	3R:1289933	-	Enhancer?	3	chr3R:1289936	CG2087	RA	exon	1	Yes	A	B
CA07385	CG2087	3R:1289933	-	Enhancer?	3	chr3R:1289936	CG2087	RA	intron	1	Yes	A	B
CA07391	CG4029	3R:6182377	+	Enhancer	3	chr3R:6182359	CG4029	RA	intron	1	Yes	A	C
CA07392	CG2681	X:2465008	+	Enhancer?	3	chrX:2602269						A	
CA07397	CG7927	3L:8069038	+	Enhancer?	3	chr3L:8103428	CG7927	RA	exon	1	No	A	
CA07414	CG10293	3R:17872898	+	Protein	3	chr3R:17881934	CG10293	RA	intron	2	Yes	A	A
CA07414	CG10293	3R:17872898	+	Protein	3	chr3R:17881934	CG10293	RB	intron	2	Yes	A	A
CA07414	CG10293	3R:17872898	+	Protein	3	chr3R:17881934	CG10293	RC	intron	2	Yes	A	A
CA07415	CG32812	X:1044624	+	Novel	3	chrX:1181220						A	
CA07421	CG2543	X:12342181	+	Enhancer?	3	chrX:12505554						A	
CA07424	CG5555	3R:15006370	-	Protein?	3	chr3R:15006353						A	
CA07427	unknown	2R:19981959	-	Enhancer?	3	chr2R:20825912						A	
CA07431	CG5444	3L:16062120	+	Enhancer	3	chr3L:16106341						A	
CA07433	CG6376	3R:17443289	-	Enhancer?	3	chr3R:17452325	CG6376	RA	exon	2	No	A	
CA07433	CG6376	3R:17443289	-	Enhancer?	3	chr3R:17452325	CG6376	RB	exon	4	No	A	
CA07433	CG6376	3R:17443289	-	Enhancer?	3	chr3R:17452325	CG6376	RC	exon	2	No	A	
CA07437	CG6324	X:15208201	+	Enhancer?	3	chrX:15371220						A	
CA07440	CG8582	3L:7329122	-	Novel	3	chr3L:7362693						A	
CA07441	CG9071	2R:19947550	+	Enhancer?	3	chr2R:20791503	CG34405	RC	intron	2	Yes	A	C
CA07449	unknown	3R:2248867	+	Enhancer?	3	chr3R:2248866	CG10272	RA	intron	2	No	A	
CA07449	unknown	3R:2248867	+	Enhancer?	3	chr3R:2248866	CG10272	RB	intron	1	No	A	
CA07451	CG11501	3R:25308617	+	Novel	3	chr3R:25319251						A	
CA07458	CG9330	3L:19536327	+	Protein?	3	chr3L:19579470	CG9330	RA	exon	1	No	A	
CA07460	CG9165	3L:1316914	+	Protein	3	chr3L:1336285	CG9165	RA	intron	2	Yes	A	A
CA07463	CG3263	3L:20734145	+	Enhancer?	3	chr3L:20809228	CG3263	R1-RA	exon	1	No	A	
CA07463	CG3263	3L:20734145	+	Enhancer?	3	chr3L:20809228	CG3263	R1-RC	exon	1	No	A	
CA07463	CG3263	3L:20734145	+	Enhancer?	3	chr3L:20809228	CG3263	R1-RG	exon	1	No	A	
CA07463	CG3263	3L:20734145	+	Enhancer?	3	chr3L:20809228	CG3263	R1-RH	exon	1	No	A	
CA07463	CG3263	3L:20734145	+	Enhancer?	3	chr3L:20809228	CG3263	R1-RI	exon	1	No	A	
CA07463	CG3263	3L:20734145	+	Enhancer?	3	chr3L:20809228	CG3263	R1-RJ	exon	1	No	A	
CA07464	CG11924	2L:4875170	-	Enhancer?	3	chr2L:4882601	CG11924	RA	intron	1	No	A	
CA07464	CG11924	2L:4875170	-	Enhancer?	3	chr2L:4882601	CG11924	RB	intron	1	No	A	
CA07464	CG11924	2L:4875170	-	Enhancer?	3	chr2L:4882601	CG11924	RC	intron	1	No	A	
CA07464	CG11924	2L:4875170	-	Enhancer?	3	chr2L:4882601	CG11924	RD	intron	1	No	A	
CA07465	CG3269	2R:1757989	+	Protein	3	chr2R:2584592	CG3269	RA	intron	1	Yes	A	A
CA07468	CG14887	3R:12306953	+	Enhancer?	3	chr3R:12306935	CG14887	RB	exon	1	No	A	
CA07470	unknown	3R:13769807	+	Enhancer	3	chr3R:13769792	CG31243	RA	intron	2	No	A	
CA07470	unknown	3R:13769807	+	Enhancer	3	chr3R:13769792	CG31243	RE	intron	2	No	A	
CA07470	unknown	3R:13769807	+	Enhancer	3	chr3R:13769792	CG31243	RF	intron	2	No	A	
CA07470	unknown	3R:13769807	+	Enhancer	3	chr3R:13769792	CG31243	RG	intron	2	No	A	
CA07473	CG2747	3R:3856542	-	Enhancer?	3	chr3R:3856527						A	
CA07474	CG8098	2R:11725007	-	Protein	3	chr2R:12548787	CG8098	RA	intron	2	Yes	A	A
CA07477	CG32672	X:10508417	-	Enhancer?	3	chrX:10662235	CG32672	RA	exon	1	No	A	
CA07481	CG14991	3L:4083660	+	Enhancer?	3	chr3L:4103034						A	
CA07482	CG7739	3L:15511925	-	Protein?	3	chr3L:15556146	CG7739	RA	exon	1	No	A	
CA07483	CG2368	2R:5619323	+	Enhancer	3	chr2R:6446195	CG2368	RA	intron	1	No	A	
CA07483	CG2368	2R:5619323	+	Enhancer	3	chr2R:6446195	CG2368	RB	intron	1	No	A	
CA07483	CG2368	2R:5619323	+	Enhancer	3	chr2R:6446195	CG2368	RC	intron	1	No	A	
CA07483	CG2368	2R:5619323	+	Enhancer	3	chr2R:6446195	CG2368	RI	intron	1	No	A	
CA07483	CG2368	2R:5619323	+	Enhancer	3	chr2R:6446195	CG2368	RL	intron	1	No	A	
CA07496	CG10640	3L:5325029	-	Protein	3	chr3L:5358821	CG10640	RA	intron	1	Yes	A	A
CA07499	CG10724	3L:13370699	+	Protein	3	chr3L:13406231	CG10724	RA	intron	1	Yes	A	A
CA07499	CG10724	3L:13370699	+	Protein	3	chr3L:13406231	CG10724	RB	intron	1	Yes	A	A
CA07504	CG8532	3L:7488324	+	Protein?	3	chr3L:7521895						A	
CA07509	CG18547	3R:7806185	-	Novel	3	chr3R:7806167						A	
CA07513	unknown	3R:13992172	-	Enhancer	3	chr3R:13992157	CG7215	RA	exon	2	No	A	
CA07513	unknown	3R:13992172	-	Enhancer	3	chr3R:13992157	CG7217	RA	exon	2	Yes	A	
CA07513	unknown	3R:13992172	-	Enhancer	3	chr3R:13992157	CG7217	RB	exon	1	Yes	A	
CA07520	unknown	3R:1123165	-	Protein	3	chr3R:1123168	CG32464	RB	intron	7	Yes	A	A
CA07520	unknown	3R:1123165	-	Protein	3	chr3R:1123168	CG32464	RD	intron	4	Yes	A	A
CA07520	unknown	3R:1123165	-	Protein	3	chr3R:1123168	CG32464	RF	exon	1	No	A	
CA07520	unknown	3R:1123165	-	Protein	3	chr3R:1123168	CG32464	RG	intron	7	Yes	A	A
CA07520	unknown	3R:1123165	-	Protein	3	chr3R:1123168	CG32464	RJ	intron	7	Yes	A	A
CA07520	unknown	3R:1123165	-	Protein	3	chr3R:1123168	CG32464	RK	intron	7	Yes	A	A
CA07520	unknown	3R:1123165	-	Protein	3	chr3R:1123168	CG32464	RL	intron	7	Yes	A	A
CA07520	unknown	3R:1123165	-	Protein	3	chr3R:1123168	CG32464	RM	intron	2	Yes	A	A
CA07520	unknown	3R:1123165	-	Protein	3	chr3R:1123168	CG32464	RN	intron	7	Yes	A	A
CA07520	unknown	3R:1123165	-	Protein	3	chr3R:1123168	CG32464	RO	intron	5	Yes	A	A
CA07520	unknown	3R:1123165	-	Protein	3	chr3R:1123168	CG32464	RP	intron	7	Yes	A	A
CA07522	CG13894	3L:680415	-	Enhancer?	3	chr3L:699786						A	
CA07526	CG11880	3R:24943024	+	Novel	3	chr3R:24953658	CG11880	RA	exon	4	No	A	
CA07526	CG11880	3R:24943024	+	Novel	3	chr3R:24953658	CG11880	RB	exon	3	No	A	
CA07526	CG11880	3R:24943024	+	Novel	3	chr3R:24953658	CG11880	RC	exon	4	No	A	
CA07529	CG6151	3L:15764554	-	Protein	3	chr3L:15808775	CG6151	RA	intron	2	Yes	A	A
CA07529	CG6151	3L:15764554	-	Protein	3	chr3L:15808775	CG6151	RB	intron	2	Yes	A	A
CA07529	CG6151	3L:15764554	-	Protein	3	chr3L:15808775	CG6151	RC	intron	2	Yes	A	A
CA07534	CG3764	3L:16959048	-	Enhancer	3	chr3L:17003268						A	
CA07541	CG11654	X:15181299	+	Protein	3	chrX:15344318	CG11654	RA	exon	1	No	A	
CA07546	CG7437	3L:21796940	+	Novel	3	chr3L:21872762	CG7437	RA	exon	1	No	A	
CA07546	CG7437	3L:21796940	+	Novel	3	chr3L:21872762	CG7437	RB	exon	1	No	A	
CA07546	CG7437	3L:21796940	+	Novel	3	chr3L:21872762	CG7437	RC	exon	1	No	A	
CA07546	CG7437	3L:21796940	+	Novel	3	chr3L:21872762	CG7437	RD	exon	1	No	A	
CA07548	unknown	2R:12484156	+	Enhancer?	3	chr2R:13307936						A	
CA07552	CG9131	2L:6040943	-	Enhancer?	3	chr2L:6048728						A	
CA07554	CG3508	3R:10486836	+	Novel	3	chr3R:10486818	CG3508	RA	exon	3	No	A	
CA07554	CG3508	3R:10486836	+	Novel	3	chr3R:10486818	CG3508	RB	exon	3	No	A	
CA07556	CG13425	2R:15648176	-	Enhancer	3	chr2R:16471969						A	
CA07562	CG3939	X:2934275	+	Protein	3	chrX:3069870	CG3939	RA	intron	1	Yes	A	A
CA07570	CG1345	3R:24151534	-	Enhancer?	3	chr3R:24162168						A	
CA07575	CG8544	X:15549079	+	Protein	3	chrX:15712098	CG8544	RA	intron	1	No	A	
CA07575	CG8544	X:15549079	+	Protein	3	chrX:15712098	CG8544	RB	intron	3	Yes	A	A
CA07575	CG8544	X:15549079	+	Protein	3	chrX:15712098	CG8544	RD	intron	1	Yes	A	A
CA07575	CG8544	X:15549079	+	Protein	3	chrX:15712098	CG8544	RE	intron	2	Yes	A	A
CA07575	CG8544	X:15549079	+	Protein	3	chrX:15712098	CG8544	RF	intron	2	Yes	A	A
CA07575	CG8544	X:15549079	+	Protein	3	chrX:15712098	CG8544	RG	intron	2	Yes	A	A
CA07579	CG7425	3R:10566347	-	Novel	3	chr3R:10566329	CG7425	RA	exon	2	No	A	
CA07580	CG6650	3L:13980608	+	Enhancer?	3	chr3L:14024828	CG6650	RA	exon	2	No	A	
CA07585	CG8678	2L:21184706	-	Enhancer	3	chr2L:21214962	CG8678	RA	intron	1	Yes	A	B
CA07586	CG8370	2R:11064028	+	Enhancer?	3	chr2R:11887808						A	
CA07596	CG9393	3R:5389704	-	Enhancer	3	chr3R:5389688						A	
CA07604	CG14437	X:6511669	+	Protein?	3	chrX:6665326	CG14437	RA	exon	1	No	A	
CA07607	CG1469	3R:26204372	+	Protein	3	chr3R:26215006	CG1469	RA	exon	3	Yes	A	
CA07607	CG1469	3R:26204372	+	Protein	3	chr3R:26215006	CG1469	RB	exon	3	Yes	A	
CA07607	CG1469	3R:26204372	+	Protein	3	chr3R:26215006	CG1469	RC	exon	1	Yes	A	
CA07622	CG9674	3L:16757414	-	Enhancer?	3	chr3L:16801634						A	
CA07623	CG3758	2L:15311776	+	Enhancer?	3	chr2L:15333691						A	
CA07634	CG17369	3R:8452757	-	Protein	3	chr3R:8452738	CG17369	RA	intron	1	Yes	A	A
CA07634	CG17369	3R:8452757	-	Protein	3	chr3R:8452738	CG17369	RB	intron	2	Yes	A	A
CA07644	CG6213	3R:15469833	-	Protein	3	chr3R:15469816	CG6213	RA	intron	1	Yes	A	A
CA07649	unknown	2L:5022166	+	Enhancer?	3	chr2L:5029595						A	
CA07652	CG8550	2R:7539028	+	Novel	3	chr2R:8361820						A	
CA07672	CG12170	3R:1462974	+	Novel	3	chr3R:1462977	CG12170	RA	exon	1	No	A	
CA07674	CG7073	3R:18175928	+	Protein	3	chr3R:18184964	CG7073	RA	intron	4	Yes	A	A
CA07674	CG7073	3R:18175928	+	Protein	3	chr3R:18184964	CG7073	RB	intron	2	Yes	A	A
CA07674	CG7073	3R:18175928	+	Protein	3	chr3R:18184964	CG7073	RC	intron	4	Yes	A	A
CA07674	CG7073	3R:18175928	+	Protein	3	chr3R:18184964	CG7073	RD	intron	4	Yes	A	A
CA07674	CG7073	3R:18175928	+	Protein	3	chr3R:18184964	CG7073	RE	intron	4	Yes	A	A
CA07676	unknown	3R:2965121	+	Protein?	3	chr3R:2965102	CG33323	RA	intron	4	Yes	A	A
CA07681	CG9375	3R:5338793	-	Enhancer?	3	chr3R:5338777	CG9375	RA	exon	1	No	A	
CA07683	CG5462	3R:22383148	+	Novel	3	chr3R:22393783	CG5462	RA	intron	9	Yes	A	A
CA07683	CG5462	3R:22383148	+	Novel	3	chr3R:22393783	CG5462	RB	intron	9	Yes	A	A
CA07683	CG5462	3R:22383148	+	Novel	3	chr3R:22393783	CG5462	RC	intron	9	Yes	A	A
CA07683	CG5462	3R:22383148	+	Novel	3	chr3R:22393783	CG5462	RD	intron	9	Yes	A	A
CA07683	CG5462	3R:22383148	+	Novel	3	chr3R:22393783	CG5462	RG	intron	9	Yes	A	A
CA07683	CG5462	3R:22383148	+	Novel	3	chr3R:22393783	CG5462	RH	intron	9	Yes	A	A
CA07683	CG5462	3R:22383148	+	Novel	3	chr3R:22393783	CG5462	RI	intron	9	Yes	A	A
CA07692	CG12225	X:6008807	+	Protein	3	chrX:6162464	CG12225	RA	intron	2	Yes	A	A
CA07694	CG3810	X:1665033	-	Enhancer?	3	chrX:1802294	CG3810	RB	exon	1	No	A	
CA07694	CG3810	X:1665033	-	Enhancer?	3	chrX:1802294	CG3810	RC	intron	1	No	A	
CA07696	CG8418	2R:11174100	-	Protein?	3	chr2R:11997880						A	
CA07703	CG5215	3L:16058433	-	Protein	3	chr3L:16102654	CG5215	RA	intron	4	Yes	A	A
CA07703	CG5215	3L:16058433	-	Protein	3	chr3L:16102654	CG5215	RB	intron	4	Yes	A	A
CA07704	CG5461	2L:12496872	-	Enhancer?	3	chr2L:12508001	CG5461	RA	intron	3	Yes	A	B
CA07704	CG5461	2L:12496872	-	Enhancer?	3	chr2L:12508001	CG5461	RF	intron	5	Yes	A	B
CA07706	CG12891	2R:5536405	-	Protein	3	chr2R:6363277	CG12891	RA	intron	1	No	A	
CA07717	CG5771	3R:16937967	+	Protein	3	chr3R:16937950	CG5771	RA	intron	1	Yes	A	A
CA07717	CG5771	3R:16937967	+	Protein	3	chr3R:16937950	CG5771	RB	intron	2	Yes	A	A
CA07720	CG5422	3R:19863346	-	Enhancer?	3	chr3R:19872689	CG5422	RB	intron	1	No	A	
CA07720	CG5422	3R:19863346	-	Enhancer?	3	chr3R:19872689	CG5422	RC	intron	1	No	A	
CA07720	CG5422	3R:19863346	-	Enhancer?	3	chr3R:19872689	CG5422	RD	intron	1	No	A	
CA07720	CG5422	3R:19863346	-	Enhancer?	3	chr3R:19872689	CG5422	RF	intron	1	No	A	
CA07724	CG13826	3R:19043180	-	Enhancer?	3	chr3R:19052523						A	
CA07742	CG5729	2R:13235239	-	Enhancer?	3	chr2R:14059010	CG5729	RA	intron	1	No	A	
CA07748	CG31694	2L:2865845	-	Protein	3	chr2L:2873276	CG31694	RA	intron	1	Yes	A	A
CA07753	CG11035	3R:3859043	-	Novel	3	chr3R:3859028						A	
CA07768	CG9042	2L:5936163	+	Enhancer?	3	chr2L:5943948	CG9042	RA	exon	1	No	A	
CA07768	CG9042	2L:5936163	+	Enhancer?	3	chr2L:5943948	CG9042	RB	exon	1	No	A	
CA07768	CG9042	2L:5936163	+	Enhancer?	3	chr2L:5943948	CG9042	RC	exon	1	No	A	
CA07788	CG11172	X:13371444	+	Protein	3	chrX:13534818	CG11172	RA	intron	1	Yes	A	A
CB02000	CG7147	2L:13532398	+	Novel	3	chr2L:13550247	CG7147	RA	exon	1	No	B	
CB02000	CG7147	2L:13532398	+	Novel	3	chr2L:13550247	CG7147	RB	exon	1	No	B	
CB02000	CG7147	2L:13532398	+	Novel	3	chr2L:13550247	CG7147	RC	exon	1	No	B	
CB02000	CG7147	2L:13532398	+	Novel	3	chr2L:13550247	CG7147	RD	exon	1	No	B	
CB02000	CG7147	2L:13532398	+	Novel	3	chr2L:13550247	CG7147	RE	exon	1	No	B	
CB02004	CG9894	2L:2745344	+	Enhancer	3	chr2L:2752775						B	
CB02015	CG7892	3L:7938638	+	Enhancer?	3	chr3L:7972207	CG7892	RA	exon	1	No	B	
CB02015	CG7892	3L:7938638	+	Enhancer?	3	chr3L:7972207	CG7892	RB	exon	1	No	B	
CB02015	CG7892	3L:7938638	+	Enhancer?	3	chr3L:7972207	CG7892	RC	exon	1	No	B	
CB02015	CG7892	3L:7938638	+	Enhancer?	3	chr3L:7972207	CG7892	RD	exon	1	No	B	
CB02015	CG7892	3L:7938638	+	Enhancer?	3	chr3L:7972207	CG7892	RE	exon	1	No	B	
CB02015	CG7892	3L:7938638	+	Enhancer?	3	chr3L:7972207	CG7892	RF	exon	1	No	B	
CB02015	CG7892	3L:7938638	+	Enhancer?	3	chr3L:7972207	CG7892	RG	exon	1	No	B	
CB02017	CG3758	2L:15311950	+	Enhancer?	3	chr2L:15333865	CG3758	RA	exon	1	No	B	
CB02022	CG30403	2R:16756893	-	Novel	3	chr2R:17600847						B	
CB02030	CG2411	2R:3710594	+	Protein?	3	chr2R:4537352	CG2411	RA	exon	1	No	B	
CB02038	unknown	2L:8096352	+	Novel	3	chr2L:8104121	CG31605	RA	intron	2	Yes	B	A
CB02038	unknown	2L:8096352	+	Novel	3	chr2L:8104121	CG31605	RB	intron	2	Yes	B	A
CB02038	unknown	2L:8096352	+	Novel	3	chr2L:8104121	CG31605	RC	intron	2	Yes	B	A
CB02038	unknown	2L:8096352	+	Novel	3	chr2L:8104121	CG31605	RD	intron	2	Yes	B	A
CB02038	unknown	2L:8096352	+	Novel	3	chr2L:8104121	CG31605	RE	intron	2	Yes	B	A
CB02038	unknown	2L:8096352	+	Novel	3	chr2L:8104121	CG31605	RF	intron	3	Yes	B	A
CB02038	unknown	2L:8096352	+	Novel	3	chr2L:8104121	CG31605	RG	intron	4	Yes	B	A
CB02038	unknown	2L:8096352	+	Novel	3	chr2L:8104121	CG31605	RH	intron	2	Yes	B	A
CB02038	unknown	2L:8096352	+	Novel	3	chr2L:8104121	CG31605	RI	intron	2	Yes	B	A
CB02039	CG17654	2L:1729440	-	Novel	3	chr2L:1727775	CG17654	RB	exon	3	Yes	B	
CB02039	CG17654	2L:1729440	-	Novel	3	chr2L:1727775	CG17654	RC	exon	3	Yes	B	
CB02039	CG17654	2L:1729440	-	Novel	3	chr2L:1727775	CG17654	RD	exon	3	Yes	B	
CB02039	CG17654	2L:1729440	-	Novel	3	chr2L:1727775	CG17654	RE	exon	3	Yes	B	
CB02040	CG3619	3R:15151967	-	Novel	3	chr3R:15151950						B	
CB02042	CG1621	2R:2553998	-	Enhancer?	3	chr2R:3380602						B	
CB02043	CG12891	2R:5539025	-	Enhancer?	3	chr2R:6365897	CG12891	RA	exon	1	No	B	
CB02050	CG4043	3R:6238635	+	Enhancer?	3	chr3R:6238617						B	
CB02054	CG5677	3R:20046380	-	Enhancer?	3	chr3R:20055723	CG5677	RA	exon	1	No	B	
CB02056	CG9062	2R:6348682	-	Novel	3	chr2R:7171458	CG9062	RB	exon	1	No	B	
CB02057	CG10823	3R:17122275	-	Enhancer?	3	chr3R:17122258						B	
CB02061	CG9415	2R:16187154	+	Protein?	3	chr2R:17031115	CG9415	RA	exon	1	No	B	
CB02061	CG9415	2R:16187154	+	Protein?	3	chr2R:17031115	CG9415	RB	exon	1	No	B	
CB02069	CG14207	X:19339419	+	Protein	3	chrX:19502492	CG14207	RA	intron	1	Yes	B	B
CB02069	CG14207	X:19339419	+	Protein	3	chrX:19502492	CG14207	RB	intron	1	Yes	B	B
CB02070	unknown	2R:2627679	-	Enhancer?	3	chr2R:3454283						B	
CB02071	CG15864	3R:4076201	+	Novel	3	chr3R:4076186						B	
CB02075	CG1888	2R:4607170	-	Novel	3	chr2R:5434043	CG1888	RA	intron	1	Yes	B	A
CB02076	unknown	3R:10523056	-	Novel	3	chr3R:10523038	CG7649	RB	exon	1	No	B	
CB02086	CG8209	3L:7936124	+	Protein	3	chr3L:7969693	CG8209	RA	intron	1	Yes	B	B
CB02087	CG8128	X:15428524	+	Enhancer?	3	chrX:15591543	CG8128	RA	exon	1	No	B	
CB02090	CG2530	3R:912444	-	Enhancer?	3	chr3R:912447						B	
CB02095	CG17117	3R:6440060	-	Enhancer?	3	chr3R:6440042	CG17117	RE	intron	1	No	B	
CB02099	CG8073	2R:4170003	-	Protein	3	chr2R:4996761	CG8073	RA	exon	1	Yes	B	
CB02099	CG8073	2R:4170003	-	Protein	3	chr2R:4996761	CG8073	RB	exon	1	Yes	B	
CB02104	CG2207	2L:21462514	-	Protein	3	chr2L:21629393	CG2207	RA	intron	1	Yes	B	B
CB02104	CG2207	2L:21462514	-	Protein	3	chr2L:21629393	CG2207	RB	intron	2	Yes	B	B
CB02104	CG2207	2L:21462514	-	Protein	3	chr2L:21629393	CG2207	RF	intron	1	Yes	B	B
CB02105	CG5887	3R:8269757	+	Enhancer?	3	chr3R:8269738	CG5887	RA	intron	1	No	B	
CB02105	CG5887	3R:8269757	+	Enhancer?	3	chr3R:8269738	CG5887	RB	intron	1	No	B	
CB02105	CG5887	3R:8269757	+	Enhancer?	3	chr3R:8269738	CG5887	RC	intron	1	No	B	
CB02105	CG5887	3R:8269757	+	Enhancer?	3	chr3R:8269738	CG5887	RE	intron	1	No	B	
CB02106	CG30497	2R:2840573	-	Novel	3	chr2R:3667177	CG30497	RA	exon	2	No	B	
CB02119	CG10279	3R:1833556	-	Protein	3	chr3R:1833559	CG10279	RA	intron	1	Yes	B	B
CB02119	CG10279	3R:1833556	-	Protein	3	chr3R:1833559	CG10279	RB	intron	1	No	B	
CB02119	CG10279	3R:1833556	-	Protein	3	chr3R:1833559	CG10279	RC	intron	2	No	B	
CB02119	CG10279	3R:1833556	-	Protein	3	chr3R:1833559	CG10279	RD	intron	2	Yes	B	B
CB02119	CG10279	3R:1833556	-	Protein	3	chr3R:1833559	CG10279	RE	intron	1	No	B	
CB02120	CG17342	3R:7590202	-	Protein	3	chr3R:7590184						B	
CB02121	CG11324	2L:6715149	-	Protein	3	chr2L:6722933	CG11324	RA	intron	1	Yes	B	B
CB02121	CG11324	2L:6715149	-	Protein	3	chr2L:6722933	CG11324	RC	intron	1	Yes	B	B
CB02124	CG4570	3R:6682635	+	Enhancer	3	chr3R:6682617	CG4570	RA	exon	1	No	B	
CB02125	CG1427	3R:1426793	+	Enhancer	3	chr3R:1426796						B	
CB02131	CG3428	3L:9445286	-	Enhancer?	3	chr3L:9480857	CG3428	RA	exon	1	No	B	
CB02132	CG6148	3R:8523620	+	Protein	3	chr3R:8523601	CG6148	RA	intron	1	Yes	B	B
CB02132	CG6148	3R:8523620	+	Protein	3	chr3R:8523601	CG6148	RB	exon	1	No	B	
CB02133	CG14478	2R:12521410	+	Enhancer	3	chr2R:13345190	CG14478	RA	exon	1	No	B	
CB02135	CG7620	3R:8856406	+	Enhancer?	3	chr3R:8856387						B	
CB02139	unknown	3R:1438299	-	Enhancer?	3	chr3R:1438302	CG2161	RA	exon	1	No	B	
CB02139	unknown	3R:1438299	-	Enhancer?	3	chr3R:1438302	CG2161	RB	exon	1	No	B	
CB02140	CG31241	3R:14081648	+	Novel	3	chr3R:14081632	CG31241	RA	exon	2	No	B	
CB02144	CG9983	3R:24415335	+	Enhancer	3	chr3R:24425969	CG9983	RA	intron	1	Yes	B	C
CB02144	CG9983	3R:24415335	+	Enhancer	3	chr3R:24425969	CG9983	RE	intron	1	Yes	B	C
CB02149	CG17328	2L:16277703	+	Novel	3	chr2L:16299619						B	
CB02162	CG8327	3R:5456529	+	Novel	3	chr3R:5456513						B	
CB02168	CG1837	X:11449163	+	Protein?	3	chrX:11608704						B	
CB02169	CG3722	2R:16100326	-	Enhancer?	3	chr2R:16944287	CG3722	RA	exon	1	No	B	
CB02171	CG1049	3L:1526734	+	Enhancer?	3	chr3L:1546105	CG1049	RA	exon	1	No	B	
CB02172	CG2050	3R:27867707	+	Enhancer?	3	chr3R:27878341	CG2050	RA	exon	3	No	B	
CB02186	CG5264	3R:18404744	-	Enhancer?	3	chr3R:18414088	CG5264	RA	exon	1	No	B	
CB02188	CG9772	3R:163495	-	Protein	3	chr3R:163496	CG9772	RB	intron	1	Yes	B	B
CB02190	CG12283	2L:12811704	-	Protein	3	chr2L:12822834						B	
CB02196	CG9699	X:16418737	-	Enhancer	3	chrX:16581750	CG9699	RA	intron	2	Yes	B	A
CB02196	CG9699	X:16418737	-	Enhancer	3	chrX:16581750	CG9699	RB	intron	2	Yes	B	A
CB02196	CG9699	X:16418737	-	Enhancer	3	chrX:16581750	CG9699	RC	intron	2	Yes	B	A
CB02196	CG9699	X:16418737	-	Enhancer	3	chrX:16581750	CG9699	RD	intron	2	Yes	B	A
CB02196	CG9699	X:16418737	-	Enhancer	3	chrX:16581750	CG9699	RE	intron	2	Yes	B	A
CB02196	CG9699	X:16418737	-	Enhancer	3	chrX:16581750	CG9699	RF	intron	2	Yes	B	A
CB02206	unknown	2R:11920896	+	Enhancer	3	chr2R:12744676	CG5935	RA	intron	2	Yes	B	A
CB02206	unknown	2R:11920896	+	Enhancer	3	chr2R:12744676	CG5935	RB	intron	1	Yes	B	A
CB02206	unknown	2R:11920896	+	Enhancer	3	chr2R:12744676	CG5935	RC	intron	2	Yes	B	A
CB02206	unknown	2R:11920896	+	Enhancer	3	chr2R:12744676	CG5935	RD	intron	2	Yes	B	A
CB02207	unknown	3R:7392290	-	Enhancer	3	chr3R:7392272	CG6782	RD	intron	1	No	B	
CB02207	unknown	3R:7392290	-	Enhancer	3	chr3R:7392272	CG6783	RA	intron	1	No	B	
CB02207	unknown	3R:7392290	-	Enhancer	3	chr3R:7392272	CG6783	RB	intron	1	Yes	B	A
CB02207	unknown	3R:7392290	-	Enhancer	3	chr3R:7392272	CG6783	RC	intron	1	Yes	B	A
CB02209	CG7007	3R:10729741	-	Enhancer?	3	chr3R:10729723	CG7007	RA	exon	1	No	B	
CB02217	CG6395	3L:22184928	+	Protein?	3	chr3L:22260750	CG6395	RA	exon	1	No	B	
CB02217	CG6395	3L:22184928	+	Protein?	3	chr3L:22260750	CG6395	RB	exon	1	No	B	
CB02217	CG6395	3L:22184928	+	Protein?	3	chr3L:22260750	CG6395	RC	exon	1	No	B	
CB02226	CG5838	2L:9959718	-	Novel	3	chr2L:9967309	CG5838	RA	exon	1	No	B	
CB02227	CG4026	2L:9774806	+	Enhancer?	3	chr2L:9782577	CG4026	RA	exon	1	No	B	
CB02228	CG12013	3L:3306512	+	Enhancer?	3	chr3L:3325883						B	
CB02231	CG17579	2R:7845077	+	Protein?	3	chr2R:8667868						B	
CB02232	CG2948	3R:1414087	+	Enhancer?	3	chr3R:1414090						B	
CB02236	CG14430	X:6726194	+	Enhancer?	3	chrX:6879851						B	
CB02239	unknown	3R:4757919	-	Novel	3	chr3R:4757904						B	
CB02242	unknown	2R:3661191	+	Enhancer?	3	chr2R:4487949	CG8643	RA	exon	1	No	B	
CB02243	CG8361	3R:21852002	+	Enhancer	3	chr3R:21862637						B	
CB02246	CG17888	3L:7814373	-	Novel?	3	chr3L:7847944	CG17888	RB	intron	1	No	B	
CB02246	CG17888	3L:7814373	-	Novel?	3	chr3L:7847944	CG17888	RF	intron	1	Yes	B	A
CB02246	CG17888	3L:7814373	-	Novel?	3	chr3L:7847944	CG17888	RG	intron	1	No	B	
CB02249	CG11382	X:967330	+	Novel	3	chrX:1103926						B	
CB02255	CG14215	X:19383231	+	Enhancer?	3	chrX:19546304						B	
CB02257	CG17077	3R:19162102	-	Enhancer?	3	chr3R:19171445	CG17077	RB	exon	1	No	B	
CB02258	CG8367	2R:9239430	+	Enhancer?	3	chr2R:10062164	CG8367	RA	intron	2	Yes	B	C
CB02258	CG8367	2R:9239430	+	Enhancer?	3	chr2R:10062164	CG8367	RB	intron	1	Yes	B	C
CB02258	CG8367	2R:9239430	+	Enhancer?	3	chr2R:10062164	CG8367	RC	intron	2	No	B	
CB02258	CG8367	2R:9239430	+	Enhancer?	3	chr2R:10062164	CG8367	RD	intron	1	Yes	B	C
CB02258	CG8367	2R:9239430	+	Enhancer?	3	chr2R:10062164	CG8367	RE	intron	1	Yes	B	C
CB02258	CG8367	2R:9239430	+	Enhancer?	3	chr2R:10062164	CG8367	RF	intron	1	Yes	B	C
CB02258	CG8367	2R:9239430	+	Enhancer?	3	chr2R:10062164	CG8367	RG	intron	1	Yes	B	C
CB02267	CG8805	2R:4474887	+	Enhancer	3	chr2R:5301760						B	
CB02270	CG13892	3L:524914	-	Protein?	3	chr3L:544285						B	
CB02274	unknown	3R:27540122	+	Protein?	3	chr3R:27550756	CG1856	RB	exon	1	No	B	
CB02274	unknown	3R:27540122	+	Protein?	3	chr3R:27550756	CG1856	RC	exon	1	No	B	
CB02274	unknown	3R:27540122	+	Protein?	3	chr3R:27550756	CG1856	RE	intron	1	No	B	
CB02274	unknown	3R:27540122	+	Protein?	3	chr3R:27550756	CG1856	RF	intron	1	No	B	
CB02276	CG3189	2R:1723852	-	Novel	3	chr2R:2550455						B	
CB02284	CG4091	2R:18745888	-	Enhancer?	3	chr2R:19589843	CG4091	RA	exon	1	No	B	
CB02284	CG4091	2R:18745888	-	Enhancer?	3	chr2R:19589843	CG4091	RC	exon	1	No	B	
CB02288	CG8648	2R:11919945	-	Novel?	3	chr2R:12743725						B						
CB02294	CG5920	2L:9889732	-	Protein	3	chr2L:9897503	CG5920	RA	exon	1	No	B	
CB02301	CG10970	X:8806961	-	Novel	3	chrX:8962010						B	
CB02305	CG7752	3L:21203421	+	Novel	3	chr3L:21279245	CG7752	RA	exon	1	No	B	
CB02307	CG5185	3L:14918138	+	Novel	3	chr3L:14962359						B	
CB02331	CG4494	2L:6959843	-	Protein?	3	chr2L:6967612						B	
CB02333	unknown	X:10484583	+	Enhancer?	3	chrX:10638401						B	
CB02337	CG3021	X:784129	+	Enhancer?	3	chrX:920725						B	
CB02343	CG10370	3R:19569160	+	Enhancer?	3	chr3R:19578503						B	
CB02349	CG8524	3R:10198847	-	Enhancer	3	chr3R:10198828						B	
CB02351	CG11130	X:13485538	+	Novel	3	chrX:13648912						B	
CB02353	CG6097	3L:11544336	-	Protein?	3	chr3L:11579904	CG6097	RA	exon	1	Yes	B	
CB02354	CG6264	3R:5996214	-	Enhancer	3	chr3R:5996196	CG6264	RA	exon	1	No	B	
CB02364	CG6575	3R:17672932	-	Enhancer	3	chr3R:17681968	CG6575	RA	exon	1	No	B	
CB02367	CG4029	3R:6183299	+	Enhancer	3	chr3R:6183281	CG4029	RA	intron	1	Yes	B	C
CB02370	CG7368	3L:11559763	+	Enhancer?	3	chr3L:11595331	CG7368	RB	intron	1	No	B	
CB02373	CG6095	3R:21867917	-	Novel	3	chr3R:21878552						B	
CB02595	CG15162	2L:18595324	+	Novel	3	chr2L:18617241						B	
CB02614	CG12972	3L:21264301	-	Novel	3	chr3L:21340125						B	
CB02618	CG8909	X:15640657	+	Novel	3	chrX:15803675						B	
CB02620	CG3525	X:16009348	+	Protein?	3	chrX:16172362	CG3525	RA	exon	1	No	B	
CB02620	CG3525	X:16009348	+	Protein?	3	chrX:16172362	CG3525	RB	exon	1	No	B	
CB02620	CG3525	X:16009348	+	Protein?	3	chrX:16172362	CG3525	RE	exon	1	No	B	
CB02632	CG6770	2L:12035003	-	Enhancer?	3	chr2L:12046132						B	
CB02634	unknown	3L:13980483	-	Novel	3	chr3L:14024703	CG6513	RA	exon	1	No	B	
CB02634	unknown	3L:13980483	-	Novel	3	chr3L:14024703	CG6513	RB	exon	1	No	B	
CB02647	CG18466	3R:4873699	-	Protein	3	chr3R:4873684	CG11992	RA	exon	1	No	B	
CB02647	CG18466	3R:4873699	-	Protein	3	chr3R:4873684	CG18466	RA	intron	1	No	B	
CB02647	CG18466	3R:4873699	-	Protein	3	chr3R:4873684	CG18466	RB	intron	1	Yes	B	B
CB02653	CG7283	3L:11780366	+	Protein	3	chr3L:11815918						B	
CB02655	CG16901	3R:9470765	-	Protein	3	chr3R:9470746	CG16901	RA	intron	1	Yes	B	B
CB02655	CG16901	3R:9470765	-	Protein	3	chr3R:9470746	CG16901	RB	intron	1	Yes	B	B
CB02655	CG16901	3R:9470765	-	Protein	3	chr3R:9470746	CG16901	RC	intron	1	Yes	B	B
CB02655	CG16901	3R:9470765	-	Protein	3	chr3R:9470746	CG16901	RD	intron	1	No	B	
CB02656	CG6603	3L:13987079	+	Protein	3	chr3L:14031299	CG6603	RA	intron	2	Yes	B	B
CB02656	CG6603	3L:13987079	+	Protein	3	chr3L:14031299	CG6603	RB	intron	2	Yes	B	B
CB02656	CG6603	3L:13987079	+	Protein	3	chr3L:14031299	CG6603	RC	intron	1	Yes	B	B
CB02667	CG5206	3R:16418883	+	Enhancer?	3	chr3R:16418866						B	
CB02669	CG2163	2R:3192991	+	Enhancer?	3	chr2R:4019749	CG2163	RA	intron	2	Yes	B	C
CB02669	CG2163	2R:3192991	+	Enhancer?	3	chr2R:4019749	CG2163	RB	intron	2	Yes	B	C
CB02670	unknown	3R:26379003	+	Enhancer	3	chr3R:26389637	CG1539	RA	intron	1	Yes	B	C
CB02670	unknown	3R:26379003	+	Enhancer	3	chr3R:26389637	CG1539	RC	intron	2	Yes	B	C
CB02670	unknown	3R:26379003	+	Enhancer	3	chr3R:26389637	CG1539	RD	intron	1	Yes	B	C
CB02670	unknown	3R:26379003	+	Enhancer	3	chr3R:26389637	CG1539	RE	intron	2	Yes	B	C
CB02670	unknown	3R:26379003	+	Enhancer	3	chr3R:26389637	CG1539	RF	intron	2	Yes	B	C
CB02670	unknown	3R:26379003	+	Enhancer	3	chr3R:26389637	CG1539	RG	intron	2	Yes	B	C
CB02689	CG10601	3L:12650994	+	Enhancer?	3	chr3L:12686547						B	
CB02693	CG31522	3R:279017	-	Enhancer?	3	chr3R:279018	CG31522	RB	exon	1	No	B	
CB02693	CG31522	3R:279017	-	Enhancer?	3	chr3R:279018	CG31522	RC	exon	1	No	B	
CB02706	CG9171	2L:5792402	-	Enhancer?	3	chr2L:5800187	CG9171	RA	exon	1	No	B	
CB02706	CG9171	2L:5792402	-	Enhancer?	3	chr2L:5800187	CG9171	RB	exon	1	No	B	
CB02736	CG18426	2R:18894643	-	Protein?	3	chr2R:19738598	CG18426	RA	exon	1	No	B	
CB02739	CG30055	2R:7654329	+	Enhancer	3	chr2R:8477121	CG30055	RA	exon	1	No	B	
CB02744	CG5408	3L:20320159	-	Novel	3	chr3L:20394721						B	
CB02745	CG32538	X:19084204	-	Novel	3	chrX:19247277						B	
CB02762	CG3166	2L:2170965	-	Novel?	3	chr2L:2178398	CG3166	RB	exon	1	No	B		
CB02767	CG6889	3R:12063462	+	Enhancer	3	chr3R:12063444	CG6889	RA	intron	1	Yes	B	C
CB02790	CG3228	X:1998866	-	Enhancer?	3	chrX:2136127						B	
CB02804	CG6963	3R:12106332	+	Protein	3	chr3R:12106314	CG6963	RB	intron	2	Yes	B	B
CB02804	CG6963	3R:12106332	+	Protein	3	chr3R:12106314	CG6963	RD	intron	2	Yes	B	B
CB02804	CG6963	3R:12106332	+	Protein	3	chr3R:12106314	CG6963	RE	intron	2	Yes	B	B
CB02804	CG6963	3R:12106332	+	Protein	3	chr3R:12106314	CG6963	RF	intron	3	Yes	B	B
CB02804	CG6963	3R:12106332	+	Protein	3	chr3R:12106314	CG6963	RH	intron	3	Yes	B	B
CB02821	CG5216	2L:13154745	+	Enhancer	3	chr2L:13165875	CG5216	RA	exon	1	No	B	
CB02831	CG3698	3L:20716674	-	Enhancer	3	chr3L:20791757						B	
CB02833	CG17646	2L:1739096	+	Protein?	3	chr2L:1737431	CG17646	RB	intron	1	No	B	
CB02849	CG7041	X:8820265	+	Enhancer?	3	chrX:8975314	CG7041	RA	exon	2	No	B	
CB02854	CG4608	3R:15662833	-	Enhancer?	3	chr3R:15662816						B	
CB02883	CG10975	3L:12693069	+	Enhancer?	3	chr3L:12728622	CG10975	RA	intron	1	Yes	B	A
CB02883	CG10975	3L:12693069	+	Enhancer?	3	chr3L:12728622	CG10975	RB	intron	1	Yes	B	A
CB02888	CG12052	2R:5602343	-	Novel	3	chr2R:6429215	CG12052	RR	intron	1	No	B	
CB02890	CG9921	X:16063779	-	Enhancer?	3	chrX:16226793						B	
CB02898	CG5481	2L:1422197	-	Enhancer?	3	chr2L:1420531						B	
CB02900	CG8652	2R:11909448	-	Novel	3	chr2R:12733228						B	
CB02930	CG8582	3L:7329350	-	Enhancer	3	chr3L:7362921						B	
CB02932	CG10753	3L:12692157	-	Protein?	3	chr3L:12727710						B	
CB02934	CG16817	3R:5503694	+	Protein?	3	chr3R:5503678	CG16817	RA	exon	1	No	B	
CB02937	CG1240	3L:2747671	+	Enhancer	3	chr3L:2767042	CG1240	RA	exon	1	No	B	
CB02947	CG9748	3R:4484584	-	Enhancer	3	chr3R:4484569	CG9748	RA	intron	1	Yes	B	C
CB02956	CG10033	2L:3624759	-	Enhancer	3	chr2L:3632190	CG10033	RA	intron	4	Yes	B	A
CB02956	CG10033	2L:3624759	-	Enhancer	3	chr2L:3632190	CG10033	RB	intron	2	Yes	B	A
CB02956	CG10033	2L:3624759	-	Enhancer	3	chr2L:3632190	CG10033	RD	exon	1	No	B	
CB02956	CG10033	2L:3624759	-	Enhancer	3	chr2L:3632190	CG10033	RH	intron	3	Yes	B	A
CB02956	CG10033	2L:3624759	-	Enhancer	3	chr2L:3632190	CG10033	RI	intron	4	Yes	B	A
CB02962	CG17323	2L:18801648	+	Enhancer?	3	chr2L:18823565						B	
CB02974	CG6033	2R:8566865	-	Protein?	3	chr2R:9389656	CG6033	RA	intron	1	No	B	
CB02974	CG6033	2R:8566865	-	Protein?	3	chr2R:9389656	CG6033	RB	intron	1	No	B	
CB02974	CG6033	2R:8566865	-	Protein?	3	chr2R:9389656	CG6033	RC	intron	1	No	B	
CB02974	CG6033	2R:8566865	-	Protein?	3	chr2R:9389656	CG6033	RD	exon	1	No	B	
CB02974	CG6033	2R:8566865	-	Protein?	3	chr2R:9389656	CG6033	RE	intron	1	No	B	
CB02974	CG6033	2R:8566865	-	Protein?	3	chr2R:9389656	CG6033	RF	intron	1	No	B	
CB02981	CG5814	3R:20687177	-	Enhancer	3	chr3R:20696520	CG5814	RA	exon	1	No	B	
CB02987	CG2718	2L:129446	+	Enhancer?	3	chr2L:129446						B	
CB02989	CG3903	2L:15740849	-	Protein?	3	chr2L:15762765						B	
CB02992	CG17716	2R:8687719	+	Novel	3	chr2R:9510510						B	
CB02997	CG9739	3L:19119477	-	Enhancer?	3	chr3L:19163698	CG9739	RB	exon	1	No	B	
CB02997	CG9739	3L:19119477	-	Enhancer?	3	chr3L:19163698	CG9739	RC	exon	1	No	B	
CB03017	CG3979	3L:18790141	-	Enhancer?	3	chr3L:18834362	CG3979	RB	intron	1	Yes	B	C
CB03017	CG3979	3L:18790141	-	Enhancer?	3	chr3L:18834362	CG3979	RC	exon	1	No	B	
CB03023	CG2865	X:2050288	-	Protein?	3	chrX:2187549						B	
CB03026	CG2698	3R:3827334	+	Enhancer?	3	chr3R:3827319	CG2698	RA	exon	1	No	B	
CB03028	CG6987	3R:12167758	-	Protein?	3	chr3R:12167740						B	
CB03031	CG9326	2L:20767449	-	Enhancer?	3	chr2L:20797707						B	
CB03039	CG14938	2L:11798282	-	Enhancer	3	chr2L:11809411	CG14938	RD	exon	1	No	B	
CB03040	CG5212	3R:19703230	-	Protein	3	chr3R:19712573	CG5212	RA	intron	2	Yes	B	B
CB03040	CG5212	3R:19703230	-	Protein	3	chr3R:19712573	CG5212	RB	intron	2	Yes	B	B
CB03040	CG5212	3R:19703230	-	Protein	3	chr3R:19712573	CG5212	RC	intron	2	Yes	B	B
CB03059	CG14066	3R:24141929	-	Enhancer	3	chr3R:24152563	CG14066	RB	intron	1	No	B	
CB03059	CG14066	3R:24141929	-	Enhancer	3	chr3R:24152563	CG14066	RC	intron	1	No	B	
CB03073	CG7664	2L:16258381	-	Protein	3	chr2L:16280297	CG7664	RA	intron	1	Yes	B	B
CB03099	CG4426	2L:1079449	+	Enhancer	3	chr2L:1077783						B	
CB03115	CG7228	2L:7986412	-	Protein?	3	chr2L:7994181	CG7228	RA	exon	1	No	B	
CB03115	CG7228	2L:7986412	-	Protein?	3	chr2L:7994181	CG7228	RB	exon	1	No	B	
CB03116	CG17090	3L:524877	+	Enhancer?	3	chr3L:544248	CG17090	RB	intron	1	No	B	
CB03117	unknown	3L:19709110	-	Enhancer	3	chr3L:19783669	CG8742	RA	intron	1	No	B	
CB03117	unknown	3L:19709110	-	Enhancer	3	chr3L:19783669	CG8742	RB	intron	1	No	B	
CB03117	unknown	3L:19709110	-	Enhancer	3	chr3L:19783669	CG8742	RC	intron	2	No	B	
CB03130	CG7008	3L:243472	-	Enhancer	3	chr3L:262842	CG7008	RA	intron	1	Yes	B	C
CB03167	CG1825	2R:4651498	+	Protein?	3	chr2R:5478371	CG1825	RA	exon	1	No	B	
CB03173	CG30404	2R:16764038	-	Enhancer?	3	chr2R:17607992						B	
CB03203	unknown	3R:1124250	-	Enhancer?	3	chr3R:1124253	CG32464	RB	intron	6	Yes	B	A
CB03203	unknown	3R:1124250	-	Enhancer?	3	chr3R:1124253	CG32464	RD	intron	3	Yes	B	A
CB03203	unknown	3R:1124250	-	Enhancer?	3	chr3R:1124253	CG32464	RG	intron	6	Yes	B	A
CB03203	unknown	3R:1124250	-	Enhancer?	3	chr3R:1124253	CG32464	RJ	intron	6	Yes	B	A
CB03203	unknown	3R:1124250	-	Enhancer?	3	chr3R:1124253	CG32464	RK	intron	6	Yes	B	A
CB03203	unknown	3R:1124250	-	Enhancer?	3	chr3R:1124253	CG32464	RL	intron	6	Yes	B	A
CB03203	unknown	3R:1124250	-	Enhancer?	3	chr3R:1124253	CG32464	RM	intron	1	Yes	B	A
CB03203	unknown	3R:1124250	-	Enhancer?	3	chr3R:1124253	CG32464	RN	intron	6	Yes	B	A
CB03203	unknown	3R:1124250	-	Enhancer?	3	chr3R:1124253	CG32464	RO	intron	4	Yes	B	A
CB03203	unknown	3R:1124250	-	Enhancer?	3	chr3R:1124253	CG32464	RP	intron	6	Yes	B	A
CB03213	CG4938	3R:11168763	+	Enhancer?	3	chr3R:11168745						B	
CB03223	CG6330	3R:22768385	-	Protein	3	chr3R:22779020	CG6330	RB	intron	2	Yes	B	B
CB03239	unknown	2L:2727869	+	Novel	3	chr2L:2735300	CG31689	RA	intron	1	No	B	
CB03239	unknown	2L:2727869	+	Novel	3	chr2L:2735300	CG31689	RB	intron	1	No	B	
CB03239	unknown	2L:2727869	+	Novel	3	chr2L:2735300	CG31689	RC	intron	1	No	B	
CB03239	unknown	2L:2727869	+	Novel	3	chr2L:2735300	CG31689	RD	intron	1	No	B	
CB03247	CG32043	3L:9420097	+	Enhancer?	3	chr3L:9455668	CG32043	RA	exon	2	No	B	
CB03247	CG32043	3L:9420097	+	Enhancer?	3	chr3L:9455668	CG32043	RB	exon	2	No	B	
CB03247	CG32043	3L:9420097	+	Enhancer?	3	chr3L:9455668	CG32043	RD	exon	2	No	B	
CB03248	CG10203	2L:6911017	-	Protein	3	chr2L:6918786	CG10203	RA	intron	1	Yes	B	B
CB03249	CG4719	3R:21476122	-	Enhancer?	3	chr3R:21486757	CG4719	RA	exon	1	No	B	
CB03256	CG4609	3L:16360565	-	Novel	3	chr3L:16404786	CG4609	RA	exon	1	No	B	
CB03256	CG4609	3L:16360565	-	Novel	3	chr3L:16404786	CG4609	RC	exon	1	No	B	
CB03272	unknown	2L:21230954	+	Novel	3	chr2L:21261210	CG8674	RA	exon	1	No	B	
CB03288	CG10581	3L:20951934	-	Enhancer	3	chr3L:21027758						B	
CB03298	CG13391	2L:8373919	-	Novel	3	chr2L:8381688	CG13391	RA	exon	1	No	B	
CB03307	CG2507	3R:2988524	+	Enhancer	3	chr3R:2988505						B	
CB03314	CG18578	3R:6982693	+	Enhancer?	3	chr3R:6982675						B	
CB03335	CG9821	3R:4646115	-	Enhancer?	3	chr3R:4646100	CG9821	RA	exon	1	No	B	
CB03335	CG9821	3R:4646115	-	Enhancer?	3	chr3R:4646100	CG9821	RB	exon	1	No	B	
CB03345	CG5037	2L:10323510	+	Enhancer	3	chr2L:10331101						B	
CB03369	CG1007	3L:729213	+	Enhancer	3	chr3L:748584						B	
CB03373	CG10652	2L:18987344	-	Protein?	3	chr2L:19009261						B	
CB03404	unknown	3R:14224646	-	Enhancer	3	chr3R:14224630	CG18617	RB	intron	1	No	B	
CB03410	CG1600	2R:2589640	-	Protein	3	chr2R:3416244	CG1600	RA	intron	1	No	B	
CB03410	CG1600	2R:2589640	-	Protein	3	chr2R:3416244	CG1600	RB	intron	1	No	B	
CB03410	CG1600	2R:2589640	-	Protein	3	chr2R:3416244	CG1600	RC	intron	1	Yes	B	B
CB03414	CG11486	3L:3051469	+	Enhancer	3	chr3L:3070840						B	
CB03431	CG5461	2L:12471814	-	Protein	3	chr2L:12482943	CG5461	RA	intron	3	Yes	B	B
CB03431	CG5461	2L:12471814	-	Protein	3	chr2L:12482943	CG5461	RB	exon	1	No	B	
CB03431	CG5461	2L:12471814	-	Protein	3	chr2L:12482943	CG5461	RD	intron	1	Yes	B	B
CB03431	CG5461	2L:12471814	-	Protein	3	chr2L:12482943	CG5461	RE	intron	2	Yes	B	B
CB03431	CG5461	2L:12471814	-	Protein	3	chr2L:12482943	CG5461	RF	intron	5	Yes	B	B
CB03450	CG3320	3R:17094772	-	Protein?	3	chr3R:17094755	CG3320	RA	exon	1	No	B	
CB03450	CG3320	3R:17094772	-	Protein?	3	chr3R:17094755	CG3320	RB	exon	1	No	B	
CB03454	CG6359	3R:8453472	+	Enhancer	3	chr3R:8453453						B	
CB03461	CG11642	X:692970	+	Protein?	3	chrX:829566	CG11642	RA	exon	1	No	B	
CB03461	CG11642	X:692970	+	Protein?	3	chrX:829566	CG11642	RB	exon	1	No	B	
CB03489	CG10772	3R:21288179	-	Enhancer	3	chr3R:21298814						B	
CB03492	CG3161	2R:1693326	-	Enhancer?	3	chr2R:2519929	CG3161	RA	intron	1	No	B	
CB03495	CG4974	3L:8786187	+	Novel	3	chr3L:8820577						B	
CB03496	CG9206	3L:13883980	+	Novel	3	chr3L:13928200						B	
CB03501	CG31158	3R:18404733	+	Enhancer	3	chr3R:18414077	CG31158	RC	exon	1	Yes	B	
CB03501	CG31158	3R:18404733	+	Enhancer	3	chr3R:18414077	CG31158	RD	exon	1	Yes	B	
CB03502	CG12855	2R:9918725	+	Protein?	3	chr2R:10742504						B	
CB03511	CG12161	3R:1045466	-	Protein?	3	chr3R:1045469						B	
CB03517	CG9924	3R:9852417	-	Enhancer?	3	chr3R:9852398	CG12537	RB	intron	2	No	B	
CB03520	CG8068	2R:4177397	+	Enhancer	3	chr2R:5004155	CG8068	RA	exon	1	No	B	
CB03520	CG8068	2R:4177397	+	Enhancer	3	chr2R:5004155	CG8068	RB	exon	1	No	B	
CB03520	CG8068	2R:4177397	+	Enhancer	3	chr2R:5004155	CG8068	RC	exon	1	No	B	
CB03520	CG8068	2R:4177397	+	Enhancer	3	chr2R:5004155	CG8068	RD	intron	1	Yes	B	C
CB03520	CG8068	2R:4177397	+	Enhancer	3	chr2R:5004155	CG8068	RE	exon	1	No	B	
CB03520	CG8068	2R:4177397	+	Enhancer	3	chr2R:5004155	CG8068	RF	exon	1	No	B	
CB03520	CG8068	2R:4177397	+	Enhancer	3	chr2R:5004155	CG8068	RG	exon	1	No	B	
CB03520	CG8068	2R:4177397	+	Enhancer	3	chr2R:5004155	CG8068	RH	intron	1	Yes	B	C
CB03520	CG8068	2R:4177397	+	Enhancer	3	chr2R:5004155	CG8068	RI	intron	1	Yes	B	C
CB03523	CG6235	3R:5958964	-	Enhancer?	3	chr3R:5958946	CG6235	RA	intron	2	Yes	B	A
CB03523	CG6235	3R:5958964	-	Enhancer?	3	chr3R:5958946	CG6235	RB	exon	2	No	B	
CB03523	CG6235	3R:5958964	-	Enhancer?	3	chr3R:5958946	CG6235	RC	exon	2	No	B	
CB03523	CG6235	3R:5958964	-	Enhancer?	3	chr3R:5958946	CG6235	RD	exon	2	No	B	
CB03523	CG6235	3R:5958964	-	Enhancer?	3	chr3R:5958946	CG6235	RE	exon	2	No	B	
CB03523	CG6235	3R:5958964	-	Enhancer?	3	chr3R:5958946	CG6235	RF	intron	2	Yes	B	A
CB03523	CG6235	3R:5958964	-	Enhancer?	3	chr3R:5958946	CG6235	RG	exon	2	No	B	
CB03523	CG6235	3R:5958964	-	Enhancer?	3	chr3R:5958946	CG6235	RH	exon	2	No	B	
CB03531	CG6093	2L:10967716	-	Enhancer	3	chr2L:10975307						B	
CB03533	CG11537	3L:3124044	-	Enhancer?	3	chr3L:3143415	CG11537	RC	exon	1	No	B	
CB03551	CG9952	2R:17732557	-	Novel	3	chr2R:18576512						B	
CB03567	unknown	3R:2233083	+	Protein?	3	chr3R:2233083	CG10272	RA	intron	1	No	B	
CB03567	unknown	3R:2233083	+	Protein?	3	chr3R:2233083	CG10272	RB	exon	1	No	B	
CB03570	CG31688	2L:20398787	+	Enhancer	3	chr2L:20429045	CG31688	RA	exon	1	No	B	
CB03579	CG18104	X:281067	+	Protein	3	chrX:417662	CG18104	RA	intron	3	Yes	B	B
CB03586	CG9424	3R:5416722	-	Novel	3	chr3R:5416706	CG9424	RA	exon	1	No	B	
CB03586	CG9424	3R:5416722	-	Novel	3	chr3R:5416706	CG9424	RB	exon	1	No	B	
CB03598	CG11793	3L:11071224	-	Enhancer?	3	chr3L:11106792	CG11793	RA	exon	1	No	B	
CB03613	CG3665	X:3876037	-	Protein	3	chrX:4029454	CG3665	RA	exon	9	Yes	B	
CB03619	CG5130	3L:20411990	-	Protein	3	chr3L:20486552	CG5130	RA	intron	1	No	B	
CB03619	CG5130	3L:20411990	-	Protein	3	chr3L:20486552	CG5130	RB	exon	1	No	B	
CB03625	CG1100	3R:1614855	+	Enhancer	3	chr3R:1614858						B	
CB03632	CG11799	3L:11077808	-	Enhancer?	3	chr3L:11113376	CG11799	RA	intron	1	No	B	
CB03632	CG11799	3L:11077808	-	Enhancer?	3	chr3L:11113376	CG11799	RD	intron	1	No	B	
CB03632	CG11799	3L:11077808	-	Enhancer?	3	chr3L:11113376	CG11799	RE	intron	1	No	B	
CB03644	CG7637	2R:5875667	-	Enhancer?	3	chr2R:6698443						B	
CB03660	CG10120	3R:8545762	-	Novel	3	chr3R:8545743	CG10120	RA	exon	2	Yes	B	
CB03660	CG10120	3R:8545762	-	Novel	3	chr3R:8545743	CG10120	RB	exon	2	Yes	B	
CB03663	CG4326	2R:19217997	-	Enhancer?	3	chr2R:20061952	CG4326	RA	exon	1	No	B	
CB03690	CG14996	3L:4103022	-	Enhancer	3	chr3L:4122396	CG14996	RB	exon	1	No	B	
CB03702	unknown	3R:27562580	-	Novel	3	chr3R:27573214	CG2245	RA	exon	1	No	B	
CB03703	CG2446	X:11449200	-	Enhancer	3	chrX:11608741	CG2446	RB	exon	1	No	B	
CB03703	CG2446	X:11449200	-	Enhancer	3	chrX:11608741	CG2446	RC	exon	1	No	B	
CB03703	CG2446	X:11449200	-	Enhancer	3	chrX:11608741	CG2446	RD	exon	1	No	B	
CB03703	CG2446	X:11449200	-	Enhancer	3	chrX:11608741	CG2446	RE	exon	1	No	B	
CB03720	CG11042	X:8891429	+	Novel?	3	chrX:9046478							
CB03721	CG9075	2L:5974689	+		3	chr2L:5982474	CG9075	RA	intron	1	Yes		B
CB03721	CG9075	2L:5974689	+		3	chr2L:5982474	CG9075	RC	intron	1	Yes		B
CB03724	CG4379	2L:9691480	-	Enhancer?	3	chr2L:9699251	CG4379	RA	exon	1	No	B	
CB03724	CG4379	2L:9691480	-	Enhancer?	3	chr2L:9699251	CG4379	RB	exon	1	No	B	
CB03724	CG4379	2L:9691480	-	Enhancer?	3	chr2L:9699251	CG4379	RC	exon	1	No	B	
CB03726	CG1395	3R:25070392	-	Protein?	3	chr3R:25081026	CG1395	RA	exon	1	No	B	
CB03738	CG6666	3R:7036025	-	Protein?	3	chr3R:7036007						B	
CB03740	unknown	3L:2447504	+	Protein	3	chr3L:2466875						B	
CB03746	CG32423	3L:5237271	-	Enhancer?	3	chr3L:5271063						B	
CB03749	CG6944	2L:5535285	+	Protein	3	chr2L:5543070	CG6944	RA	intron	1	No	B	
CB03751	CG16747	2R:7237580	-	Protein	3	chr2R:8060372	CG16747	RA	intron	1	Yes	B	B
CB03754	CG5576	2R:13475724	-	Enhancer?	3	chr2R:14299509	CG5576	RA	intron	1	No	B	
CB03762	CG1435	X:7077310	+	Enhancer?	3	chrX:7230966						B	
CB03773	CG9925	3R:9790753	-	Novel	3	chr3R:9790734						B	
CB03781	CG2108	3R:1509117	-	Enhancer?	3	chr3R:1509120	CG2108	RA	intron	1	No	B	
CB03789	unknown	3L:9021688	-	Protein	3	chr3L:9056078	CG32031	RA	intron	2	Yes	B	B
CB03789	unknown	3L:9021688	-	Protein	3	chr3L:9056078	CG32031	RE	intron	2	Yes	B	B
CB03790	CG30404	2R:16763385	-	Enhancer?	3	chr2R:17607339	CG30404	RA	intron	1	No	B	
CB03790	CG30404	2R:16763385	-	Enhancer?	3	chr2R:17607339	CG30404	RB	exon	1	No	B	
CB03823	CG13598	3R:19739121	-	Enhancer?	3	chr3R:19748464	CG13598	RC	intron	1	No	B	
CB03823	CG13598	3R:19739121	-	Enhancer?	3	chr3R:19748464	CG13598	RD	intron	1	No	B	
CB03825	CG9165	3L:1315557	+	Novel	3	chr3L:1334928	CG9165	RA	exon	1	No	B	
CB03836	CG6439	3R:17835790	-	Enhancer	3	chr3R:17844826	CG6439	RA	exon	1	No	B	
CB03837	CG8444	3R:5086382	+	Enhancer?	3	chr3R:5086366	CG8444	RA	exon	1	No	B	
CB03855	CG3644	2R:7934936	+	Enhancer?	3	chr2R:8757727						B	
CB03856	CG11111	X:13493398	+	Enhancer?	3	chrX:13656772						B	
CB03866	CG10642	3L:5318039	-	Enhancer?	3	chr3L:5351831	CG10642	RA	exon	1	Yes	B	
CB03889	unknown	3R:24706849	+	Protein	3	chr3R:24717483	CG33553	RA	intron	3	Yes	B	B
CB03889	unknown	3R:24706849	+	Protein	3	chr3R:24717483	CG33553	RB	intron	3	Yes	B	B
CB03889	unknown	3R:24706849	+	Protein	3	chr3R:24717483	CG33553	RF	intron	3	Yes	B	B
CB03889	unknown	3R:24706849	+	Protein	3	chr3R:24717483	CG33553	RG	intron	3	Yes	B	B
CB03889	unknown	3R:24706849	+	Protein	3	chr3R:24717483	CG33553	RI	intron	3	Yes	B	B
CB03898	CG16971	3L:204736	+	Enhancer?	3	chr3L:224106	CG16971	RB	exon	1	No	B	
CB03898	CG16971	3L:204736	+	Enhancer?	3	chr3L:224106	CG16971	RC	exon	1	No	B	
CB03898	CG16971	3L:204736	+	Enhancer?	3	chr3L:224106	CG16971	RD	exon	1	No	B	
CB03922	CG6540	X:18379154	+	Protein?	3	chrX:18542228	CG6540	RA	exon	1	No	B	
CB03931	CG5605	3L:20268038	+	Protein	3	chr3L:20342600	CG5605	RA	intron	1	Yes	B	B
CB03931	CG5605	3L:20268038	+	Protein	3	chr3L:20342600	CG5605	RB	intron	2	Yes	B	B
CB03931	CG5605	3L:20268038	+	Protein	3	chr3L:20342600	CG5605	RC	intron	2	Yes	B	B
CB03931	CG5605	3L:20268038	+	Protein	3	chr3L:20342600	CG5605	RE	intron	2	Yes	B	B
CB03931	CG5605	3L:20268038	+	Protein	3	chr3L:20342600	CG5605	RF	intron	2	Yes	B	B
CB03931	CG5605	3L:20268038	+	Protein	3	chr3L:20342600	CG5605	RG	intron	2	Yes	B	B
CB03988	CG32345	3L:608769	-	Enhancer?	3	chr3L:628140						B	
CB04040	unknown	2R:13737276	-	Enhancer?	3	chr2R:14561061						B	
CB04045	CG1543	X:7734401	+	Enhancer?	3	chrX:7889488						B	
CB04047	CG2974	X:9826489	-	Protein?	3	chrX:9980614						B	
CB04063	unknown	X:12201734	+	Protein?	3	chrX:12365107						B	
CB04073	CG8031	3R:8837959	-	Enhancer?	3	chr3R:8837940						B	
CB04090	CG8171	2R:10444327	-	Enhancer?	3	chr2R:11268107	CG8171	RA	exon	1	No	B	
CB04101	CG7484	3L:17603214	+	Protein	3	chr3L:17647435						B	
CB04106	unknown	3L:11028069	+	Enhancer?	3	chr3L:11063637						B	
CB04117	CG14895	3R:12279355	-	Enhancer	3	chr3R:12279337	CG14895	RA	exon	1	No	B	
CB04117	CG14895	3R:12279355	-	Enhancer	3	chr3R:12279337	CG14895	RB	exon	1	No	B	
CB04139	CG15098	2R:13898987	-	Novel	3	chr2R:14722772						B	
CB04140	CG4898	3R:11116582	+	Enhancer?	3	chr3R:11116564	CG4898	RB	intron	3	Yes	B	C
CB04140	CG4898	3R:11116582	+	Enhancer?	3	chr3R:11116564	CG4898	RC	intron	1	Yes	B	C
CB04140	CG4898	3R:11116582	+	Enhancer?	3	chr3R:11116564	CG4898	RD	intron	3	Yes	B	C
CB04140	CG4898	3R:11116582	+	Enhancer?	3	chr3R:11116564	CG4898	RE	intron	5	Yes	B	C
CB04140	CG4898	3R:11116582	+	Enhancer?	3	chr3R:11116564	CG4898	RF	intron	3	Yes	B	C
CB04140	CG4898	3R:11116582	+	Enhancer?	3	chr3R:11116564	CG4898	RG	intron	3	Yes	B	C
CB04140	CG4898	3R:11116582	+	Enhancer?	3	chr3R:11116564	CG4898	RH	intron	3	Yes	B	C
CB04140	CG4898	3R:11116582	+	Enhancer?	3	chr3R:11116564	CG4898	RI	intron	2	Yes	B	C
CB04140	CG4898	3R:11116582	+	Enhancer?	3	chr3R:11116564	CG4898	RJ	intron	3	Yes	B	C
CB04140	CG4898	3R:11116582	+	Enhancer?	3	chr3R:11116564	CG4898	RK	intron	3	Yes	B	C
CB04140	CG4898	3R:11116582	+	Enhancer?	3	chr3R:11116564	CG4898	RL	intron	3	Yes	B	C
CB04145	CG7555	3L:17478717	+	Enhancer?	3	chr3L:17522938						B	
CB04148	CG32436	3L:21264444	+	Enhancer?	3	chr3L:21340268	CG32436	RA	intron	1	Yes	B	C
CB04149	CG1433	3R:1439091	+	Novel	3	chr3R:1439094	CG1433	RA	exon	1	No	B	
CB04163	CG3431	3L:9434572	-	Enhancer	3	chr3L:9470143						B	
CB04172	CG10236	3L:6177581	-	Enhancer?	3	chr3L:6211152						B	
CB04173	CG33214	3L:21424815	-	Enhancer	3	chr3L:21500637	CG33214	RA	exon	1	No	B	
CB04175	CG13895	3L:688864	-	Enhancer?	3	chr3L:708235						B	
CB04203	CG4258	2L:872153	-	Novel	3	chr2L:870488						B	
CB04206	CG4678	X:16426154	+	Enhancer?	3	chrX:16589167						B	
CB04247	CG7070	3R:18185133	+	Enhancer?	3	chr3R:18194169	CG7070	RB	intron	1	No	B	
CB04249	CG4300	3L:12234775	-	Enhancer?	3	chr3L:12270328	CG4300	RA	exon	1	No	B	
CB04249	CG4300	3L:12234775	-	Enhancer?	3	chr3L:12270328	CG4300	RB	exon	1	No	B	
CB04253	CG17273	3R:16656339	-	Novel	3	chr3R:16656322	CG17273	RA	exon	1	No	B	
CB04263	CG11849	3R:21001327	+	Enhancer	3	chr3R:21010670						B	
CB04282	CG1099	2L:21111927	-	Enhancer?	3	chr2L:21142183	CG1099	RA	intron	1	No	B	
CB04282	CG1099	2L:21111927	-	Enhancer?	3	chr2L:21142183	CG1099	RB	intron	1	No	B	
CB04302	CG7471	3L:4604704	+	Enhancer?	3	chr3L:4626763	CG7471	RA	exon	1	No	B	
CB04307	CG6612	3R:6715053	-	Enhancer	3	chr3R:6715035						B	
CB04353	CG5201	3R:12882304	+	Enhancer	3	chr3R:12882289	CG5201	RA	intron	2	No	B	
CB04353	CG5201	3R:12882304	+	Enhancer	3	chr3R:12882289	CG5201	RB	intron	1	No	B	
CB04353	CG5201	3R:12882304	+	Enhancer	3	chr3R:12882289	CG5201	RC	intron	2	No	B	
CB04363	CG5059	3L:20437935	-	Enhancer?	3	chr3L:20512497	CG5059	RA	exon	1	No	B	
CB04363	CG5059	3L:20437935	-	Enhancer?	3	chr3L:20512497	CG5059	RD	exon	1	No	B	
CB04377	CG6094	2L:10499182	+	Enhancer	3	chr2L:10506773						B	
CB04388	CG16708	3R:1193530	-	Enhancer?	3	chr3R:1193533	CG16708	RA	intron	1	No	B	
CB04396	CG11711	3L:11510937	-	Protein	3	chr3L:11546505	CG11711	RC	intron	1	Yes	B	B
CB04396	CG11711	3L:11510937	-	Protein	3	chr3L:11546505	CG11711	RD	intron	1	Yes	B	B
CB04397	CG14709	3R:7394904	+	Protein?	3	chr3R:7394886						B	
CB04399	CG2204	2R:5504911	+	Enhancer	3	chr2R:6331783	CG2204	RB	intron	2	Yes	B	A
CB04399	CG2204	2R:5504911	+	Enhancer	3	chr2R:6331783	CG2204	RC	intron	2	No	B	
CB04399	CG2204	2R:5504911	+	Enhancer	3	chr2R:6331783	CG2204	RD	intron	2	Yes	B	A
CB04399	CG2204	2R:5504911	+	Enhancer	3	chr2R:6331783	CG2204	RE	intron	2	Yes	B	A
CB04399	CG2204	2R:5504911	+	Enhancer	3	chr2R:6331783	CG2204	RF	intron	2	Yes	B	A
CB04399	CG2204	2R:5504911	+	Enhancer	3	chr2R:6331783	CG2204	RG	intron	2	Yes	B	A
CB04399	CG2204	2R:5504911	+	Enhancer	3	chr2R:6331783	CG2204	RH	intron	1	Yes	B	A
CB04401	unknown	3R:10549516	-	Novel	3	chr3R:10549498	CG33967	RA	exon	1	No	B	
CB04412	CG3409	2R:1775724	-	Enhancer	3	chr2R:2602327	CG3409	RA	intron	1	No	B	
CB04422	CG6610	3L:6034515	+	Enhancer?	3	chr3L:6068307						B	
CB04427	CG8322	2R:11064987	-	Protein	3	chr2R:11888767						B	
CB04444	CG5454	3R:14809847	-	Enhancer?	3	chr3R:14809830						B	
CB04470	CG7425	3R:10566478	-	Enhancer?	3	chr3R:10566460	CG7425	RA	exon	2	No	B	
CB04483	CG3287	2R:1873364	+	Protein	3	chr2R:2699967	CG3287	RB	intron	2	Yes	B	B
CB04483	CG3287	2R:1873364	+	Protein	3	chr2R:2699967	CG3287	RC	intron	1	Yes	B	B
CB04492	CG9397	2R:1562822	+	Enhancer?	3	chr2R:2389425						B	
CB04502	CG8004	3L:19847712	-	Enhancer?	3	chr3L:19922274						B	
CB04503	CG9648	3L:19213358	-	Enhancer?	3	chr3L:19257579						B	
CB04516	CG32177	3L:17602440	-	Enhancer?	3	chr3L:17646661	CG32177	RA	intron	1	No	B	
CB04516	CG32177	3L:17602440	-	Enhancer?	3	chr3L:17646661	CG32179	RA	intron	1	No	B	
CB04527	CG8206	X:15471576	+	Novel	3	chrX:15634595						B	
CB04533	CG32529	X:19618075	+	Enhancer?	3	chrX:19781148	CG32529	RA	intron	2	Yes	B	A
CB04539	CG2977	X:6738933	-	Enhancer?	3	chrX:6892590	CG2977	RB	intron	3	Yes	B	C
CB04551	CG10718	2L:20063196	+	Enhancer	3	chr2L:20085119	CG10718	RA	intron	1	Yes	B	C
CB04573	CG1691	X:10550423	-	Protein	3	chrX:10702676	CG1691	RD	intron	2	Yes	B	B
CB04573	CG1691	X:10550423	-	Protein	3	chrX:10702676	CG1691	RE	intron	2	Yes	B	B
CB04573	CG1691	X:10550423	-	Protein	3	chrX:10702676	CG1691	RF	intron	2	Yes	B	B
CB04573	CG1691	X:10550423	-	Protein	3	chrX:10702676	CG1691	RG	intron	2	Yes	B	B
CB04573	CG1691	X:10550423	-	Protein	3	chrX:10702676	CG1691	RH	intron	3	Yes	B	B
CB04600	CG31475	3R:15006373	+	Protein?	3	chr3R:15006356						B	
CB04603	CG10198	3R:19598963	-	Enhancer?	3	chr3R:19608306						B	
CB04616	CG4995	2L:10314358	+	Enhancer?	3	chr2L:10321949						B	
CB04624	unknown	3R:27800845	-	Enhancer?	3	chr3R:27811479	CG31000	RA	exon	1	No	B	
CB04624	unknown	3R:27800845	-	Enhancer?	3	chr3R:27811479	CG31000	RB	intron	1	No	B	
CB04624	unknown	3R:27800845	-	Enhancer?	3	chr3R:27811479	CG31000	RD	exon	1	No	B	
CB04624	unknown	3R:27800845	-	Enhancer?	3	chr3R:27811479	CG31000	RE	exon	1	No	B	
CB04624	unknown	3R:27800845	-	Enhancer?	3	chr3R:27811479	CG31000	RH	exon	1	No	B	
CB04624	unknown	3R:27800845	-	Enhancer?	3	chr3R:27811479	CG31000	RI	exon	1	No	B	
CB04624	unknown	3R:27800845	-	Enhancer?	3	chr3R:27811479	CG31000	RJ	exon	1	No	B	
CB04624	unknown	3R:27800845	-	Enhancer?	3	chr3R:27811479	CG31000	RK	exon	1	No	B	
CB04624	unknown	3R:27800845	-	Enhancer?	3	chr3R:27811479	CG31000	RL	exon	1	No	B	
CB04632	CG5723	3L:22325139	-	Novel	3	chr3L:22400961	CG5723	RB	exon	1	No	B	
CB04632	CG5723	3L:22325139	-	Novel	3	chr3L:22400961	CG5723	RC	exon	1	No	B	
CB04634	CG10917	2R:13296497	+	Enhancer?	3	chr2R:14120268	CG10917	RA	exon	1	No	B	
CB04635	CG8038	3L:7938870	-	Enhancer?	3	chr3L:7972439						B	
CB04638	CG10849	3L:3884141	+	Protein?	3	chr3L:3903512	CG10849	RA	exon	1	No	B	
CB04746	unknown	2L:16864641	+	Novel	3	chr2L:16886557						B	
CB04748	CG8472	2R:7324481	+	Enhancer	3	chr2R:8147273	CG8472	RA	intron	1	No	B	
CB04752	CG8588	3L:7320148	-	Protein?	3	chr3L:7353719						B	
CB04753	CG10399	2L:6952647	+	Enhancer?	3	chr2L:6960416						B	
CB04769	CG4878	2R:12600137	+	Protein?	3	chr2R:13423917	CG4878	RA	exon	1	No	B	
CB04769	CG4878	2R:12600137	+	Protein?	3	chr2R:13423917	CG4878	RB	intron	1	No	B	
CB04785	CG6014	3L:21314560	+	Enhancer?	3	chr3L:21390384	CG6014	RA	intron	1	No	B	
CB04813	CG6510	2R:12612064	-	Enhancer?	3	chr2R:13435844						B	
CB04854	CG5543	2R:18852809	+	Enhancer?	3	chr2R:19696764						B	
CB04871	CG1374	2L:21661919	+	Protein?	3	chr2L:21828798	CG1374	RA	exon	1	No	B	
CB04883	CG1634	X:8256314	+	Enhancer?	3	chrX:8411401						B	
CB04894	CG17161	2L:16662005	+	Enhancer?	3	chr2L:16683921	CG17161	RB	intron	1	No	B	
CB04894	CG17161	2L:16662005	+	Enhancer?	3	chr2L:16683921	CG17161	RC	intron	1	No	B	
CB04897	CG5735	3L:8912378	-	Enhancer?	3	chr3L:8946768	CG5735	RB	intron	1	No	B	
CB04897	CG5735	3L:8912378	-	Enhancer?	3	chr3L:8946768	CG5735	RD	intron	2	No	B	
CB04905	unknown	2R:9018583	+	Protein?	3	chr2R:9841374						B	
CB04917	CG11255	3L:12979749	-	Protein	3	chr3L:13015302	CG11255	RA	intron	1	Yes	B	B
CB04925	CG7110	2L:13388429	+	Enhancer?	3	chr2L:13399559	CG7110	RB	exon	2	Yes	B	
CB04933	CG4338	3R:11101003	+	Enhancer?	3	chr3R:11100985						B	
CB04937	CG12389	2R:6371922	-	Protein	3	chr2R:7194698	CG12389	RA	intron	1	Yes	B	B
CB04956	CG5164	2R:13462193	+	Novel	3	chr2R:14285978	CG5164	RA	exon	1	Yes	B	
CB04957	CG10119	2R:9638353	-	Protein	3	chr2R:10462132	CG10119	RA	intron	1	Yes	B	B
CB04958	CG8036	3R:4495779	+	Protein?	3	chr3R:4495764	CG8036	RB	intron	2	Yes	B	B
CB04958	CG8036	3R:4495779	+	Protein?	3	chr3R:4495764	CG8036	RC	intron	1	Yes	B	B
CB04962	CG9331	2L:20794301	+	Protein?	3	chr2L:20824559	CG9331	RB	intron	1	No	B	
CB04962	CG9331	2L:20794301	+	Protein?	3	chr2L:20824559	CG9331	RC	exon	1	No	B	
CB04962	CG9331	2L:20794301	+	Protein?	3	chr2L:20824559	CG9331	RD	intron	1	No	B	
CB04962	CG9331	2L:20794301	+	Protein?	3	chr2L:20824559	CG9331	RE	exon	1	Yes	B	
CB04965	CG7450	3L:15483628	+	Novel	3	chr3L:15527849						B	
CB04968	CG5889	3R:22967557	+	Protein	3	chr3R:22978192	CG5889	RA	intron	1	Yes	B	B
CB04973	CG2331	2R:5050144	+	Protein	3	chr2R:5877016	CG2331	RA	intron	1	Yes	B	B
CB04973	CG2331	2R:5050144	+	Protein	3	chr2R:5877016	CG2331	RB	intron	1	No	B	
CB04973	CG2331	2R:5050144	+	Protein	3	chr2R:5877016	CG2331	RD	exon	1	No	B	
CB05018	CG5434	3R:16414071	+	Enhancer?	3	chr3R:16414054						B	
CB05020	CG1655	X:10599649	-	Novel	3	chrX:10751743						B	
CB05024	CG11940	X:19579487	-	Enhancer	3	chrX:19742560	CG11940	RA	intron	1	Yes	B	C
CB05039	CG8676	2L:21220531	+	Enhancer?	3	chr2L:21250787	CG8676	RA	intron	2	No	B	
CB05039	CG8676	2L:21220531	+	Enhancer?	3	chr2L:21250787	CG8676	RB	intron	2	No	B	
CB05039	CG8676	2L:21220531	+	Enhancer?	3	chr2L:21250787	CG8676	RC	intron	2	No	B	
CB05039	CG8676	2L:21220531	+	Enhancer?	3	chr2L:21250787	CG8676	RD	intron	2	No	B	
CB05043	CG4059	3L:18714622	-	Enhancer?	3	chr3L:18758843	CG4059	RB	intron	1	Yes	B	A
CB05052	CG5836	3R:13366186	+	Protein?	3	chr3R:13366171	CG5836	RA	exon	1	No	B	
CB05083	CG3886	2R:8045450	-	Enhancer?	3	chr2R:8868241	CG3886	RA	exon	1	No	B	
CB05084	CG14292	3R:14732367	-	Enhancer?	3	chr3R:14732350						B	
CB05091	CG12744	2R:4935945	+	Enhancer?	3	chr2R:5762817	CG12744	RA	exon	1	No	B	
CB05094	CG17002	2R:2046704	+	Enhancer?	3	chr2R:2873307	CG17002	RB	exon	1	No	B	
CB05101	CG10072	3L:6924316	-	Enhancer?	3	chr3L:6957887	CG10072	RA	exon	1	No	B	
CB05114	CG11280	3L:13071589	+	Enhancer?	3	chr3L:13107142						B	
CB05129	CG6030	3R:14919967	+	Enhancer?	3	chr3R:14919950						B	
CB05132	CG2699	2L:297938	+	Enhancer?	3	chr2L:297938	CG2699	RA	exon	1	No	B	
CB05139	CG5688	3L:11953059	-	Protein?	3	chr3L:11988611	CG5688	RA	exon	4	Yes	B	
CB05150	CG3321	3R:10153427	+	Novel	3	chr3R:10153408	CG3321	RA	exon	2	No	B	
CB05150	CG3321	3R:10153427	+	Novel	3	chr3R:10153408	CG3321	RB	exon	2	No	B	
CB05154	CG7331	3R:4175549	+	Novel	3	chr3R:4175534						B	
CB05156	CG8651	3R:10108500	-	Enhancer	3	chr3R:10108481	CG8651	RA	intron	1	No	B	
CB05156	CG8651	3R:10108500	-	Enhancer	3	chr3R:10108481	CG8651	RB	intron	1	No	B	
CB05156	CG8651	3R:10108500	-	Enhancer	3	chr3R:10108481	CG8651	RC	intron	1	No	B	
CB05156	CG8651	3R:10108500	-	Enhancer	3	chr3R:10108481	CG8651	RD	intron	1	No	B	
CB05156	CG8651	3R:10108500	-	Enhancer	3	chr3R:10108481	CG8651	RE	intron	1	No	B	
CB05160	CG8127	3L:17963420	-	Enhancer	3	chr3L:18007641	CG8127	RB	intron	1	Yes	B	A
CB05177	CG9480	2R:16244024	+	Enhancer?	3	chr2R:17087978						B	
CB05190	CG31363	3R:7430657	-	Protein	3	chr3R:7430639	CG31363	RA	intron	1	Yes	B	B
CB05190	CG31363	3R:7430657	-	Protein	3	chr3R:7430639	CG31363	RD	intron	1	Yes	B	B
CB05190	CG31363	3R:7430657	-	Protein	3	chr3R:7430639	CG31363	RH	intron	1	Yes	B	B
CB05192	CG6499	3R:11075751	-	Protein	3	chr3R:11075733	CG6499	RB	exon	1	No	B	
CB05200	CG5637	3R:14983817	+	Enhancer?	3	chr3R:14983800	CG5637	RA	intron	1	Yes	B	A
CB05206	CG10293	3R:17859698	+	Novel	3	chr3R:17868734	CG10293	RA	exon	2	No	B	
CB05206	CG10293	3R:17859698	+	Novel	3	chr3R:17868734	CG10293	RB	exon	2	No	B	
CB05206	CG10293	3R:17859698	+	Novel	3	chr3R:17868734	CG10293	RC	exon	2	No	B	
CB05223	CG3919	3L:14358762	+	Enhancer?	3	chr3L:14402982						B	
CB05224	CG1500	X:11734635	-	Enhancer?	3	chrX:11898010						B	
CB05226	CG7823	3L:19847705	+	Protein	3	chr3L:19922267	CG7823	RA	intron	1	No	B	
CB05229	CG14982	3L:3923087	+	Enhancer?	3	chr3L:3942458						B	
CB05233	CG1772	2R:4773127	+	Novel	3	chr2R:5599999	CG1772	RA	exon	1	No	B	
CB05233	CG1772	2R:4773127	+	Novel	3	chr2R:5599999	CG1772	RB	exon	1	No	B	
CB05261	CG8938	2R:12161123	-	Novel	3	chr2R:12984903	CG8938	RB	exon	1	No	B	
CB05261	CG8938	2R:12161123	-	Novel	3	chr2R:12984903	CG8938	RC	exon	1	No	B	
CB05263	CG17836	3R:14749566	+	Enhancer?	3	chr3R:14749549	CG17836	RA	intron	3	Yes	B	A
CB05263	CG17836	3R:14749566	+	Enhancer?	3	chr3R:14749549	CG17836	RB	intron	3	Yes	B	A
CB05263	CG17836	3R:14749566	+	Enhancer?	3	chr3R:14749549	CG17836	RC	intron	2	No	B	
CB05263	CG17836	3R:14749566	+	Enhancer?	3	chr3R:14749549	CG17836	RE	intron	1	No	B	
CB05265	CG10444	2R:15338197	-	Enhancer?	3	chr2R:16161990	CG10444	RA	exon	1	No	B	
CB05282	CG4916	2L:10232777	+	Protein	3	chr2L:10240368	CG4916	RA	intron	1	Yes	B	B
CB05282	CG4916	2L:10232777	+	Protein	3	chr2L:10240368	CG4916	RB	intron	1	No	B	
CB05312	CG12367	2R:7210468	+	Enhancer?	3	chr2R:8033260	CG12367	RA	exon	1	No	B	
CB05329	CG12418	3R:5700375	+	Novel	3	chr3R:5700359						B	
CB05330	CG5269	3R:15045979	-	Protein	3	chr3R:15045962	CG5269	RA	intron	2	Yes	B	B
CB05331	CG4612	2R:19569684	-	Enhancer?	3	chr2R:20413639						B	
CB05336	CG8092	2R:10277333	-	Enhancer?	3	chr2R:11101113	CG8092	RA	exon	1	No	B	
CB05336	CG8092	2R:10277333	-	Enhancer?	3	chr2R:11101113	CG8092	RB	exon	1	No	B	
CB05358	CG10840	3L:3441238	-	Protein?	3	chr3L:3460609						B	
CB05360	unknown	3R:10417443	+	Enhancer?	3	chr3R:10417425	CG31317	RC	intron	2	Yes	B	A
CB05417	unknown	3R:19925293	-	Protein?	3	chr3R:19934636	CG33100	RA	exon	1	No	B	
CB05429	CG7533	3L:11445381	+	Enhancer?	3	chr3L:11480949	CG7533	RC	exon	1	No	B	
CB05445	CG3209	2R:19112556	+	Enhancer?	3	chr2R:19956511	CG3209	RA	exon	1	No	B	
CB05445	CG3209	2R:19112556	+	Enhancer?	3	chr2R:19956511	CG3209	RB	exon	1	No	B	
CB05455	CG6424	2R:12783343	-	Enhancer?	3	chr2R:13607123						B	
CB05457	CG10645	3L:5314667	-	Enhancer?	3	chr3L:5348459	CG10645	RC	intron	1	No	B	
CB05467	unknown	2L:5035702	-	Enhancer?	3	chr2L:5043131	CG31650	RA	intron	1	No	B	
CB05467	unknown	2L:5035702	-	Enhancer?	3	chr2L:5043131	CG31650	RB	exon	1	No	B	
CB05467	unknown	2L:5035702	-	Enhancer?	3	chr2L:5043131	CG31650	RC	exon	1	No	B	
CB05470	CG1070	3R:2934206	-	Enhancer	3	chr3R:2934187	CG1070	RA	intron	5	Yes	B	C
CB05470	CG1070	3R:2934206	-	Enhancer	3	chr3R:2934187	CG1070	RD	intron	5	Yes	B	C
CB05477	CG1667	2R:4904408	+	Enhancer	3	chr2R:5731280	CG1667	RA	exon	2	No	B	
CB05492	unknown	3L:9017227	-	Protein	3	chr3L:9051617	CG32031	RA	intron	3	Yes	B	B
CB05492	unknown	3L:9017227	-	Protein	3	chr3L:9051617	CG32031	RB	intron	2	Yes	B	B
CB05492	unknown	3L:9017227	-	Protein	3	chr3L:9051617	CG32031	RE	intron	2	Yes	B	B
CB05493	CG9805	3R:259578	-	Enhancer?	3	chr3R:259579	CG9805	RA	exon	1	No	B	
CB05548	unknown	3R:7605477	-	Enhancer?	3	chr3R:7605459						B	
CB05562	unknown	X:6832377	-	Protein?	3	chrX:6986034	CG14425	RA	exon	2	No	B	
CB05562	unknown	X:6832377	-	Protein?	3	chrX:6986034	CG18350	RA	intron	2	No	B	
CB05562	unknown	X:6832377	-	Protein?	3	chrX:6986034	CG18350	RB	exon	2	No	B	
CB05562	unknown	X:6832377	-	Protein?	3	chrX:6986034	CG18350	RC	intron	1	Yes	B	B
CB05562	unknown	X:6832377	-	Protein?	3	chrX:6986034	CG18350	RD	exon	2	No	B	
CB05562	unknown	X:6832377	-	Protein?	3	chrX:6986034	CG18350	RE	intron	2	No	B	
CB05562	unknown	X:6832377	-	Protein?	3	chrX:6986034	CG18350	RF	exon	2	No	B	
CB05562	unknown	X:6832377	-	Protein?	3	chrX:6986034	CG18350	RG	exon	3	No	B	
CB05562	unknown	X:6832377	-	Protein?	3	chrX:6986034	CG18350	RH	exon	2	No	B	
CB05562	unknown	X:6832377	-	Protein?	3	chrX:6986034	CG18350	RI	intron	1	No	B	
CB05562	unknown	X:6832377	-	Protein?	3	chrX:6986034	CG18350	RJ	exon	2	No	B	
CB05562	unknown	X:6832377	-	Protein?	3	chrX:6986034	CG18350	RK	exon	2	No	B	
CB05562	unknown	X:6832377	-	Protein?	3	chrX:6986034	CG18350	RL	exon	2	No	B	
CB05562	unknown	X:6832377	-	Protein?	3	chrX:6986034	CG18350	RM	exon	2	No	B	
CB05562	unknown	X:6832377	-	Protein?	3	chrX:6986034	CG18350	RN	intron	1	Yes	B	B
CB05562	unknown	X:6832377	-	Protein?	3	chrX:6986034	CG18350	RO	intron	1	Yes	B	B
CB05566	CG1910	3R:27561019	+	Enhancer?	3	chr3R:27571653						B	
CB05605	unknown	3L:14223169	+	Enhancer?	3	chr3L:14267389						B	
CB05610	CG1347	3R:1495040	+	Enhancer?	3	chr3R:1495043						B	
CB05612	CG4159	3R:16418905	-	Enhancer?	3	chr3R:16418888						B	
CB05625	CG11033	3R:4880361	+	Enhancer?	3	chr3R:4880346	CG11033	RA	intron	2	Yes	B	C
CB05667	CG32592	X:14794853	-	Enhancer?	3	chrX:14957872						B	
CB05682	CG2851	2L:589706	-	Enhancer?	3	chr2L:588041	CG2851	RA	intron	2	Yes	B	C
CB05687	CG14084	3L:19209553	+	Protein?	3	chr3L:19253774						B	
CB05689	CG3567	2R:2032525	-	Novel	3	chr2R:2859128						B	
CB05694	CG9591	3R:9508921	-	Protein?	3	chr3R:9508902	CG9591	RA	exon	2	No	B	
CB05698	CG1004	3L:1444328	+	Enhancer?	3	chr3L:1463699						B	
CB05774	CG15532	3R:26093007	+	Protein?	3	chr3R:26103641						B	
CB05794	CG10746	2L:20063127	-	Enhancer?	3	chr2L:20085050	CG10746	RA	exon	1	No	B	
CC00024	CG6755	3R:19067682	+	Enhancer?	3	chr3R:19077025						C	
CC00034	unknown	3L:15537974	+	Enhancer?	3	chr3L:15582195	CG32149	RA	exon	1	No	C	
CC00034	unknown	3L:15537974	+	Enhancer?	3	chr3L:15582195	CG32149	RB	exon	1	No	C	
CC00034	unknown	3L:15537974	+	Enhancer?	3	chr3L:15582195	CG32149	RC	exon	1	No	C	
CC00102	CG4427	2L:481428	-	Protein	3	chr2L:479763						C	
CC00103	CG17180	3L:521257	+	Valid?	3	chr3L:540628						C	
CC00106	CG17260	2L:3029857	+	Enhancer?	3	chr2L:3037288						C	
CC00122	CG10975	3L:12693069	+	Enhancer?	3	chr3L:12728622	CG10975	RA	intron	1	Yes	C	A
CC00122	CG10975	3L:12693069	+	Enhancer?	3	chr3L:12728622	CG10975	RB	intron	1	Yes	C	A
CC00123	CG32435	3L:21093723	+	Protein?	3	chr3L:21169547	CG32435	RA	exon	1	No	C	
CC00123	CG32435	3L:21093723	+	Protein?	3	chr3L:21169547	CG32435	RB	intron	1	No	C	
CC00195	CG7897	2R:899250	+	Enhancer?	3	chr2R:1647884						C	
CC00204	CG3967	3L:9384264	-	Enhancer?	3	chr3L:9419835						C	
CC00224	CG6033	2R:8566865	-	Novel	3	chr2R:9389656	CG6033	RA	intron	1	No	C	
CC00224	CG6033	2R:8566865	-	Novel	3	chr2R:9389656	CG6033	RB	intron	1	No	C	
CC00224	CG6033	2R:8566865	-	Novel	3	chr2R:9389656	CG6033	RC	intron	1	No	C	
CC00224	CG6033	2R:8566865	-	Novel	3	chr2R:9389656	CG6033	RD	exon	1	No	C	
CC00224	CG6033	2R:8566865	-	Novel	3	chr2R:9389656	CG6033	RE	intron	1	No	C	
CC00224	CG6033	2R:8566865	-	Novel	3	chr2R:9389656	CG6033	RF	intron	1	No	C	
CC00233	CG9218	2R:14680260	-	Protein	3	chr2R:15504045	CG9218	RA	intron	2	Yes	C	C
CC00233	CG9218	2R:14680260	-	Protein	3	chr2R:15504045	CG9218	RC	intron	2	Yes	C	C
CC00233	CG9218	2R:14680260	-	Protein	3	chr2R:15504045	CG9218	RE	intron	2	Yes	C	C
CC00233	CG9218	2R:14680260	-	Protein	3	chr2R:15504045	CG9218	RF	intron	2	Yes	C	C
CC00236	CG32423	3L:5144101	-	Protein	3	chr3L:5177892	CG32423	RA	intron	3	Yes	C	C
CC00236	CG32423	3L:5144101	-	Protein	3	chr3L:5177892	CG32423	RB	intron	3	Yes	C	C
CC00236	CG32423	3L:5144101	-	Protein	3	chr3L:5177892	CG32423	RC	exon	1	No	C	
CC00236	CG32423	3L:5144101	-	Protein	3	chr3L:5177892	CG32423	RD	intron	2	Yes	C	C
CC00237	CG15509	3R:25580961	+	Novel	3	chr3R:25591595						C	
CC00245	CG8149	3R:5328312	+	Protein?	3	chr3R:5328296						C	
CC00251	unknown	2L:19168426	+	Novel?	3	chr2L:19190343						C						
CC00254	CG7176	3L:8317541	-	Protein	3	chr3L:8351931	CG7176	RA	intron	1	No	C	
CC00254	CG7176	3L:8317541	-	Protein	3	chr3L:8351931	CG7176	RB	exon	1	No	C	
CC00254	CG7176	3L:8317541	-	Protein	3	chr3L:8351931	CG7176	RC	exon	1	No	C	
CC00254	CG7176	3L:8317541	-	Protein	3	chr3L:8351931	CG7176	RF	intron	1	No	C	
CC00254	CG7176	3L:8317541	-	Protein	3	chr3L:8351931	CG7176	RG	intron	1	No	C	
CC00277	CG1070	3R:2933508	-	Protein	3	chr3R:2933489	CG1070	RA	intron	5	Yes	C	C
CC00277	CG1070	3R:2933508	-	Protein	3	chr3R:2933489	CG1070	RB	exon	1	No	C	
CC00277	CG1070	3R:2933508	-	Protein	3	chr3R:2933489	CG1070	RC	exon	1	No	C	
CC00277	CG1070	3R:2933508	-	Protein	3	chr3R:2933489	CG1070	RD	intron	5	Yes	C	C
CC00277	CG1070	3R:2933508	-	Protein	3	chr3R:2933489	CG1070	RE	exon	1	No	C	
CC00277	CG1070	3R:2933508	-	Protein	3	chr3R:2933489	CG1070	RF	exon	1	No	C	
CC00294	CG4029	3R:6182263	+	Protein	3	chr3R:6182245	CG4029	RA	intron	1	Yes	C	C
CC00319	CG5670	3R:16783435	+	Protein	3	chr3R:16783418	CG5670	RA	intron	1	Yes	C	C
CC00319	CG5670	3R:16783435	+	Protein	3	chr3R:16783418	CG5670	RC	intron	1	No	C	
CC00319	CG5670	3R:16783435	+	Protein	3	chr3R:16783418	CG5670	RF	intron	1	No	C	
CC00319	CG5670	3R:16783435	+	Protein	3	chr3R:16783418	CG5670	RG			No	C	
CC00336	CG7914	X:18924339	-	Novel	3	chrX:19087412	CG7914	RA	exon	1	Yes	C	
CC00350	CG4300	3L:12235244	-	Enhancer?	3	chr3L:12270797						C	
CC00357	CG18214	3L:1015490	-	Enhancer?	3	chr3L:1034861	CG18214	RA	exon	1	No	C	
CC00357	CG18214	3L:1015490	-	Enhancer?	3	chr3L:1034861	CG18214	RC	exon	1	No	C	
CC00358	CG5499	3R:22682658	+	Protein	3	chr3R:22693293	CG5499	RA	intron	2	Yes	C	C
CC00380	CG2163	2R:3192978	+	Protein	3	chr2R:4019736	CG2163	RA	intron	2	Yes	C	C
CC00380	CG2163	2R:3192978	+	Protein	3	chr2R:4019736	CG2163	RB	intron	2	Yes	C	C
CC00392	CG4035	3L:9359507	-	Protein	3	chr3L:9395078	CG4035	RA	intron	1	No	C	
CC00392	CG4035	3L:9359507	-	Protein	3	chr3L:9395078	CG4035	RB	intron	1	No	C	
CC00392	CG4035	3L:9359507	-	Protein	3	chr3L:9395078	CG4035	RC	intron	1	Yes	C	C
CC00392	CG4035	3L:9359507	-	Protein	3	chr3L:9395078	CG4035	RD	intron	1	No	C	
CC00392	CG4035	3L:9359507	-	Protein	3	chr3L:9395078	CG4035	RE	exon	1	No	C	
CC00392	CG4035	3L:9359507	-	Protein	3	chr3L:9395078	CG4035	RG	intron	1	No	C	
CC00404	CG9739	3L:19119581	-	Protein	3	chr3L:19163802						C	
CC00416	unknown	3R:26378605	+	Protein	3	chr3R:26389239	CG1539	RA	intron	1	Yes	C	C
CC00416	unknown	3R:26378605	+	Protein	3	chr3R:26389239	CG1539	RC	intron	2	Yes	C	C
CC00416	unknown	3R:26378605	+	Protein	3	chr3R:26389239	CG1539	RD	intron	1	Yes	C	C
CC00416	unknown	3R:26378605	+	Protein	3	chr3R:26389239	CG1539	RE	intron	2	Yes	C	C
CC00416	unknown	3R:26378605	+	Protein	3	chr3R:26389239	CG1539	RF	intron	2	Yes	C	C
CC00416	unknown	3R:26378605	+	Protein	3	chr3R:26389239	CG1539	RG	intron	2	Yes	C	C
CC00445	CG7467	3R:13529487	-	Protein	3	chr3R:13529472	CG7467	RA	intron	4	Yes	C	C
CC00445	CG7467	3R:13529487	-	Protein	3	chr3R:13529472	CG7467	RB	intron	4	Yes	C	C
CC00445	CG7467	3R:13529487	-	Protein	3	chr3R:13529472	CG7467	RC	intron	4	Yes	C	C
CC00455	CG5486	3L:5713473	+	Enhancer	3	chr3L:5747265	CG5486	RA	intron	1	No	C	
CC00455	CG5486	3L:5713473	+	Enhancer	3	chr3L:5747265	CG5486	RC	intron	1	No	C	
CC00460	unknown	X:16879988	-	Enhancer	3	chrX:17043062						C	
CC00470	CG12026	3L:1864022	+	Enhancer?	3	chr3L:1883393						C	
CC00479	CG9755	3R:4983787	-	Protein	3	chr3R:4983771	CG9755	RA	intron	8	Yes	C	C
CC00479	CG9755	3R:4983787	-	Protein	3	chr3R:4983771	CG9755	RB	intron	6	Yes	C	C
CC00479	CG9755	3R:4983787	-	Protein	3	chr3R:4983771	CG9755	RC	intron	8	Yes	C	C
CC00479	CG9755	3R:4983787	-	Protein	3	chr3R:4983771	CG9755	RD	intron	8	Yes	C	C
CC00483	CG3204	2R:19107076	+	Protein?	3	chr2R:19951031	CG3204	RA	exon	1	Yes	C	
CC00483	CG3204	2R:19107076	+	Protein?	3	chr2R:19951031	CG3204	RB	exon	1	Yes	C	
CC00488	CG2849	X:3452048	-	Novel	3	chrX:3598074						C	
CC00492	unknown	X:15229981	+	Protein	3	chrX:15393000	CG33206	RA	intron	2	Yes	C	C
CC00502	CG11771	3R:20748408	+	Enhancer?	3	chr3R:20757751	CG11771	RA	exon	1	No	C	
CC00511	CG32062	3L:10480037	+	Protein	3	chr3L:10515608	CG32062	RB	intron	2	Yes	C	C
CC00511	CG32062	3L:10480037	+	Protein	3	chr3L:10515608	CG32062	RD	intron	2	Yes	C	C
CC00511	CG32062	3L:10480037	+	Protein	3	chr3L:10515608	CG32062	RE	intron	2	Yes	C	C
CC00511	CG32062	3L:10480037	+	Protein	3	chr3L:10515608	CG32062	RF	intron	2	Yes	C	C
CC00511	CG32062	3L:10480037	+	Protein	3	chr3L:10515608	CG32062	RG	intron	2	Yes	C	C
CC00523	CG16973	3L:2565304	-	Protein	3	chr3L:2584675	CG16973	RA	intron	2	Yes	C	C
CC00523	CG16973	3L:2565304	-	Protein	3	chr3L:2584675	CG16973	RB	intron	2	Yes	C	C
CC00523	CG16973	3L:2565304	-	Protein	3	chr3L:2584675	CG16973	RC	intron	2	Yes	C	C
CC00523	CG16973	3L:2565304	-	Protein	3	chr3L:2584675	CG16973	RD	intron	2	Yes	C	C
CC00523	CG16973	3L:2565304	-	Protein	3	chr3L:2584675	CG16973	RE	intron	2	Yes	C	C
CC00526	CG5060	3R:16079058	+	Protein	3	chr3R:16079041	CG5060	RA	intron	1	Yes	C	C
CC00534	CG4285	3R:11076272	+	Enhancer	3	chr3R:11076254						C	
CC00578	CG4898	3R:11117382	+	Protein	3	chr3R:11117364	CG4898	RA	intron	1	Yes	C	C
CC00578	CG4898	3R:11117382	+	Protein	3	chr3R:11117364	CG4898	RB	intron	4	Yes	C	C
CC00578	CG4898	3R:11117382	+	Protein	3	chr3R:11117364	CG4898	RC	intron	1	Yes	C	C
CC00578	CG4898	3R:11117382	+	Protein	3	chr3R:11117364	CG4898	RD	intron	3	Yes	C	C
CC00578	CG4898	3R:11117382	+	Protein	3	chr3R:11117364	CG4898	RE	intron	5	Yes	C	C
CC00578	CG4898	3R:11117382	+	Protein	3	chr3R:11117364	CG4898	RF	intron	3	Yes	C	C
CC00578	CG4898	3R:11117382	+	Protein	3	chr3R:11117364	CG4898	RG	intron	3	Yes	C	C
CC00578	CG4898	3R:11117382	+	Protein	3	chr3R:11117364	CG4898	RH	intron	3	Yes	C	C
CC00578	CG4898	3R:11117382	+	Protein	3	chr3R:11117364	CG4898	RI	intron	2	Yes	C	C
CC00578	CG4898	3R:11117382	+	Protein	3	chr3R:11117364	CG4898	RJ	intron	3	Yes	C	C
CC00578	CG4898	3R:11117382	+	Protein	3	chr3R:11117364	CG4898	RK	intron	3	Yes	C	C
CC00578	CG4898	3R:11117382	+	Protein	3	chr3R:11117364	CG4898	RL	intron	3	Yes	C	C
CC00625	CG12163	3R:1076932	-	Protein	3	chr3R:1076935	CG12163	RA	intron	1	Yes	C	C
CC00625	CG12163	3R:1076932	-	Protein	3	chr3R:1076935	CG12163	RB	intron	1	Yes	C	C
CC00636	CG8624	3L:7094043	+	Enhancer	3	chr3L:7127614						C	
CC00645	CG7185	3L:8273699	-	Protein	3	chr3L:8308089	CG7185	RA	intron	1	Yes	C	C
CC00664	unknown	3R:27752638	-	Protein	3	chr3R:27763272	CG31000	RA	intron	4	Yes	C	C
CC00664	unknown	3R:27752638	-	Protein	3	chr3R:27763272	CG31000	RB	intron	4	Yes	C	C
CC00664	unknown	3R:27752638	-	Protein	3	chr3R:27763272	CG31000	RD	intron	5	Yes	C	C
CC00664	unknown	3R:27752638	-	Protein	3	chr3R:27763272	CG31000	RE	intron	4	Yes	C	C
CC00664	unknown	3R:27752638	-	Protein	3	chr3R:27763272	CG31000	RF	intron	4	Yes	C	C
CC00664	unknown	3R:27752638	-	Protein	3	chr3R:27763272	CG31000	RG	intron	4	Yes	C	C
CC00664	unknown	3R:27752638	-	Protein	3	chr3R:27763272	CG31000	RH	intron	5	Yes	C	C
CC00664	unknown	3R:27752638	-	Protein	3	chr3R:27763272	CG31000	RI	intron	3	Yes	C	C
CC00664	unknown	3R:27752638	-	Protein	3	chr3R:27763272	CG31000	RJ	intron	3	Yes	C	C
CC00664	unknown	3R:27752638	-	Protein	3	chr3R:27763272	CG31000	RK	intron	3	Yes	C	C
CC00664	unknown	3R:27752638	-	Protein	3	chr3R:27763272	CG31000	RL	intron	3	Yes	C	C
CC00664	unknown	3R:27752638	-	Protein	3	chr3R:27763272	CG31000	RM	intron	6	No	C	
CC00664	unknown	3R:27752638	-	Protein	3	chr3R:27763272	CG31000	RN	intron	5	Yes	C	C
CC00670	CG9508	2L:6403502	-	Novel	3	chr2L:6411287						C	
CC00677	CG6424	2R:12780319	-	Protein	3	chr2R:13604099	CG6424	RA	exon	2	No	C	
CC00683	CG9281	X:15441627	-	Enhancer?	3	chrX:15604646						C	
CC00684	CG8111	3L:7873442	-	Enhancer	3	chr3L:7907013	CG8111	RA	exon	3	Yes	C	
CC00708	CG2310	3R:25308577	-	Protein?	3	chr3R:25319211	CG2310	RA	exon	1	No	C	
CC00708	CG2310	3R:25308577	-	Protein?	3	chr3R:25319211	CG2310	RB	exon	1	No	C	
CC00719	CG9894	2L:2747758	+	Protein	3	chr2L:2755189	CG9894	RA	intron	1	Yes	C	C
CC00719	CG9894	2L:2747758	+	Protein	3	chr2L:2755189	CG9894	RB	intron	2	Yes	C	C
CC00735	CG9539	2L:6471760	-	Protein	3	chr2L:6479544	CG9539	RA	intron	2	Yes	C	C
CC00737	CG7008	3L:243472	-	Protein	3	chr3L:262842	CG7008	RA	intron	1	Yes	C	C
CC00758	CG9244	2L:21138899	+	Protein	3	chr2L:21169155	CG9244	RB	intron	1	Yes	C	C
CC00758	CG9244	2L:21138899	+	Protein	3	chr2L:21169155	CG9244	RC	intron	1	No	C	
CC00791	CG16858	2L:5011576	-	Protein	3	chr2L:5019005	CG16858	RA	intron	2	Yes	C	C
CC00795	CG7967	3L:1633685	-	Enhancer?	3	chr3L:1653056						C	
CC00797	CG8912	2R:11932075	-	Protein	3	chr2R:12755855						C	
CC00801	unknown	2L:221924	-	Protein	3	chr2L:221924	CG3696	RA	intron	12	Yes	C	C
CC00801	unknown	2L:221924	-	Protein	3	chr2L:221924	CG3696	RB	exon	1	No	C	
CC00810	CG6215	3L:15764056	+	Novel	3	chr3L:15808277						C	
CC00814	CG8472	2R:7326478	+	Protein	3	chr2R:8149270	CG8472	RA	intron	2	Yes	C	C
CC00817	CG9796	3R:9227017	-	Protein	3	chr3R:9226998	CG9796	RA	intron	1	Yes	C	C
CC00819	CG11107	2R:2447986	+	Enhancer?	3	chr2R:3274590						C	
CC00825	CG8920	2R:15384406	+	Protein	3	chr2R:16208199	CG8920	RA	intron	1	No	C	
CC00825	CG8920	2R:15384406	+	Protein	3	chr2R:16208199	CG8920	RB	intron	2	Yes	C	C
CC00825	CG8920	2R:15384406	+	Protein	3	chr2R:16208199	CG8920	RC	intron	2	Yes	C	C
CC00841	CG16983	X:413460	+	Enhancer?	3	chrX:550056						C	
CC00858	CG6416	3L:8592650	+	Protein	3	chr3L:8627040	CG6416	RA	intron	2	Yes	C	C
CC00858	CG6416	3L:8592650	+	Protein	3	chr3L:8627040	CG6416	RB	intron	3	Yes	C	C
CC00858	CG6416	3L:8592650	+	Protein	3	chr3L:8627040	CG6416	RE	intron	3	Yes	C	C
CC00858	CG6416	3L:8592650	+	Protein	3	chr3L:8627040	CG6416	RF	intron	3	Yes	C	C
CC00858	CG6416	3L:8592650	+	Protein	3	chr3L:8627040	CG6416	RG	intron	2	Yes	C	C
CC00858	CG6416	3L:8592650	+	Protein	3	chr3L:8627040	CG6416	RH	intron	2	Yes	C	C
CC00858	CG6416	3L:8592650	+	Protein	3	chr3L:8627040	CG6416	RI	intron	2	Yes	C	C
CC00858	CG6416	3L:8592650	+	Protein	3	chr3L:8627040	CG6416	RJ	intron	1	Yes	C	C
CC00860	CG12405	2R:5483986	+	Enhancer	3	chr2R:6310858						C	
CC00862	CG2109	3R:1296103	-	Enhancer?	3	chr3R:1296106	CG2109	RA	exon	2	Yes	C	
CC00864	CG6945	3L:15044042	-	Protein?	3	chr3L:15088263						C	
CC00869	CG9748	3R:4485365	-	Protein	3	chr3R:4485350	CG9748	RA	intron	1	Yes	C	C
CC00871	CG10497	2R:16518992	-	Protein	3	chr2R:17362946	CG10497	RA	intron	2	Yes	C	C
CC00871	CG10497	2R:16518992	-	Protein	3	chr2R:17362946	CG10497	RB	intron	2	Yes	C	C
CC00871	CG10497	2R:16518992	-	Protein	3	chr2R:17362946	CG10497	RC	intron	2	Yes	C	C
CC00883	CG6007	3R:14853853	-	Enhancer?	3	chr3R:14853836	CG6007	RA	exon	3	Yes	C	B
CC00883	CG6007	3R:14853853	-	Enhancer?	3	chr3R:14853836	CG6007	RA	intron	3	Yes	C	B
CC00884	CG30482	2R:9071970	-	Enhancer?	3	chr2R:9894761						C	
CC00886	CG1864	2L:20685980	-	Enhancer?	3	chr2L:20716238						C	
CC00904	CG32486	3L:3040926	-	Protein	3	chr3L:3060297	CG32486	RD	intron	1	Yes	C	C
CC00907	CG6871	3L:18771730	+	Protein	3	chr3L:18815951	CG6871	RA	intron	1	Yes	C	C
CC00914	CG5454	3R:14810077	-	Enhancer?	3	chr3R:14810060						C	
CC00917	CG2185	3R:1480528	-	Enhancer?	3	chr3R:1480531	CG2185	RA	exon	1	No	C	
CC00921	unknown	2R:11920160	+	Protein	3	chr2R:12743940	CG5935	RA	intron	1	Yes	C	C
CC00921	unknown	2R:11920160	+	Protein	3	chr2R:12743940	CG5935	RC	intron	1	Yes	C	C
CC00921	unknown	2R:11920160	+	Protein	3	chr2R:12743940	CG5935	RD	intron	1	Yes	C	C
CC00924	unknown	3R:20050776	+	Protein	3	chr3R:20060119	CG33106	RA	intron	1	Yes	C	C
CC00924	unknown	3R:20050776	+	Protein	3	chr3R:20060119	CG33106	RB	intron	1	Yes	C	C
CC00947	CG5557	3R:14991336	+	Enhancer?	3	chr3R:14991319	CG5557	RA	intron	1	No	C	
CC00986	CG30118	2R:13504177	-	Enhancer	3	chr2R:14327962	CG30118	RA	exon	1	No	C	
CC00986	CG30118	2R:13504177	-	Enhancer	3	chr2R:14327962	CG30118	RB	exon	1	No	C	
CC00986	CG30118	2R:13504177	-	Enhancer	3	chr2R:14327962	CG30118	RC	exon	1	No	C	
CC00987	CG4900	3R:18540900	-	Enhancer	3	chr3R:18550244	CG4900	RA	exon	1	Yes	C	
CC00988	CG1210	3L:112429	+	Enhancer?	3	chr3L:131799	CG1210	RD	intron	1	Yes	C	C
CC01002	CG17309	3R:7476405	-	Enhancer?	3	chr3R:7476387	CG17309	RB	exon	1	No	C	
CC01010	CG8320	2R:11054940	+	Enhancer?	3	chr2R:11878720						C	
CC01032	CG1903	X:12941234	-	Protein	3	chrX:13104608	CG1903	RA	intron	1	Yes	C	C
CC01032	CG1903	X:12941234	-	Protein	3	chrX:13104608	CG1903	RB	intron	1	Yes	C	C
CC01032	CG1903	X:12941234	-	Protein	3	chrX:13104608	CG1903	RC	intron	1	Yes	C	C
CC01032	CG1903	X:12941234	-	Protein	3	chrX:13104608	CG1903	RD	intron	1	Yes	C	C
CC01041	CG15737	X:11624567	+	Enhancer?	3	chrX:11787942						C	
CC01058	CG11937	X:19618072	-	Enhancer?	3	chrX:19781145	CG11937	RA	exon	1	Yes	C	
CC01113	CG17870	2R:5161652	+	Enhancer?	3	chr2R:5988524	CG17870	RB	intron	1	No	C	
CC01113	CG17870	2R:5161652	+	Enhancer?	3	chr2R:5988524	CG17870	RE	intron	1	No	C	
CC01113	CG17870	2R:5161652	+	Enhancer?	3	chr2R:5988524	CG17870	RF	intron	1	No	C	
CC01113	CG17870	2R:5161652	+	Enhancer?	3	chr2R:5988524	CG17870	RH	intron	1	No	C	
CC01129	CG3836	3L:14358531	-	Enhancer?	3	chr3L:14402751	CG3836	RA	exon	1	Yes	C	
CC01148	CG9364	2R:16119622	+	Enhancer	3	chr2R:16963583	CG9364	RE	intron	1	No	C	
CC01155	CG17246	2R:14459820	-	Enhancer?	3	chr2R:15283605						C	
CC01156	unknown	3R:25597580	+	Protein	3	chr3R:25608214	CG33956	RA	intron	1	Yes	C	C
CC01156	unknown	3R:25597580	+	Protein	3	chr3R:25608214	CG33956	RD	intron	1	Yes	C	C
CC01169	CG3184	X:6429627	-	Novel	3	chrX:6583284	CG14442	RA	exon	2	No	C	
CC01186	CG5393	2R:18629853	+	Protein	3	chr2R:19473808	CG5393	RA	intron	1	Yes	C	C
CC01186	CG5393	2R:18629853	+	Protein	3	chr2R:19473808	CG5393	RB	intron	1	Yes	C	C
CC01186	CG5393	2R:18629853	+	Protein	3	chr2R:19473808	CG5393	RC	intron	1	Yes	C	C
CC01186	CG5393	2R:18629853	+	Protein	3	chr2R:19473808	CG5393	RD	intron	2	Yes	C	C
CC01186	CG5393	2R:18629853	+	Protein	3	chr2R:19473808	CG5393	RE	intron	2	No	C	
CC01204	CG14701	3R:7057586	+	Protein?	3	chr3R:7057568						C	
CC01220	CG33123	2L:3507194	-	Protein	3	chr2L:3514625	CG33123	RA	exon	1	No	C	
CC01224	CG7917	3R:25820736	+	Protein	3	chr3R:25831370	CG7917	RA	intron	2	Yes	C	C
CC01294	CG17273	3R:16655003	-	Protein	3	chr3R:16654986	CG17273	RA	intron	1	Yes	C	C
CC01310	CG9674	3L:16756644	-	Enhancer	3	chr3L:16800864						C	
CC01311	CG15015	3L:4331453	-	Protein	3	chr3L:4350828	CG15015	RA	intron	2	Yes	C	C
CC01311	CG15015	3L:4331453	-	Protein	3	chr3L:4350828	CG15015	RB	intron	2	Yes	C	C
CC01326	CG12306	3L:20229081	+	Protein	3	chr3L:20303643	CG12306	RA	intron	1	Yes	C	C
CC01326	CG12306	3L:20229081	+	Protein	3	chr3L:20303643	CG12306	RB	intron	1	Yes	C	C
CC01359	CG4609	3L:16359596	-	Protein	3	chr3L:16403817	CG4609	RA	intron	1	Yes	C	C
CC01359	CG4609	3L:16359596	-	Protein	3	chr3L:16403817	CG4609	RC	intron	1	Yes	C	C
CC01367	CG1070	3R:2935668	-	Protein	3	chr3R:2935649	CG1070	RA	intron	5	Yes	C	C
CC01367	CG1070	3R:2935668	-	Protein	3	chr3R:2935649	CG1070	RD	intron	5	Yes	C	C
CC01368	unknown	X:19362529	-	Protein	3	chrX:19525602	CG12238	RA	intron	4	Yes	C	C
CC01377	CG6692	2R:9029266	+	Protein	3	chr2R:9852057	CG6692	RA	intron	2	Yes	C	C
CC01377	CG6692	2R:9029266	+	Protein	3	chr2R:9852057	CG6692	RB	intron	2	Yes	C	C
CC01377	CG6692	2R:9029266	+	Protein	3	chr2R:9852057	CG6692	RC	intron	2	Yes	C	C
CC01380	CG1088	3R:1417889	+	Protein	3	chr3R:1417892	CG1088	RA	intron	1	Yes	C	C
CC01380	CG1088	3R:1417889	+	Protein	3	chr3R:1417892	CG1088	RB	intron	2	Yes	C	C
CC01391	CG11266	2L:7025388	+	Protein	3	chr2L:7033157	CG11266	RA	intron	2	Yes	C	C
CC01391	CG11266	2L:7025388	+	Protein	3	chr2L:7033157	CG11266	RB	intron	1	Yes	C	C
CC01391	CG11266	2L:7025388	+	Protein	3	chr2L:7033157	CG11266	RC	intron	1	No	C	
CC01391	CG11266	2L:7025388	+	Protein	3	chr2L:7033157	CG11266	RD	intron	2	No	C	
CC01391	CG11266	2L:7025388	+	Protein	3	chr2L:7033157	CG11266	RF	intron	1	No	C	
CC01391	CG11266	2L:7025388	+	Protein	3	chr2L:7033157	CG11266	RG	intron	2	No	C	
CC01392	CG5393	2R:18624364	+	Protein	3	chr2R:19468319	CG5393	RB	intron	1	Yes	C	C
CC01392	CG5393	2R:18624364	+	Protein	3	chr2R:19468319	CG5393	RC	intron	1	Yes	C	C
CC01392	CG5393	2R:18624364	+	Protein	3	chr2R:19468319	CG5393	RD	intron	1	No	C	
CC01392	CG5393	2R:18624364	+	Protein	3	chr2R:19468319	CG5393	RE	intron	1	No	C	
CC01393	CG4254	2R:19089036	-	Protein	3	chr2R:19932991	CG4254	RA	intron	1	Yes	C	C
CC01398	CG5784	2R:12933114	-	Protein	3	chr2R:13756894	CG5784	RA	intron	2	Yes	C	C
CC01398	CG5784	2R:12933114	-	Protein	3	chr2R:13756894	CG5784	RB	intron	3	Yes	C	C
CC01398	CG5784	2R:12933114	-	Protein	3	chr2R:13756894	CG5784	RC	intron	2	Yes	C	C
CC01402	CG4068	X:4674963	-	Novel	3	chrX:4828382	CG4068	RB	intron	1	No	C	
CC01402	CG4068	X:4674963	-	Novel	3	chrX:4828382	CG4068	RC	intron	1	No	C	
CC01414	CG6146	X:15051487	+	Protein	3	chrX:15214506	CG6146	RA	intron	1	Yes	C	C
CC01414	CG6146	X:15051487	+	Protein	3	chrX:15214506	CG6146	RC	intron	1	Yes	C	C
CC01420	CG10106	2R:2076723	+	Protein	3	chr2R:2903326	CG10106	RA	intron	2	Yes	C	C
CC01427	CG31531	3R:485281	+	Enhancer	3	chr3R:485282						C	
CC01437	CG6667	2L:17428557	-	Enhancer?	3	chr2L:17450474						C	
CC01450	CG9432	2R:1801636	-	Enhancer?	3	chr2R:2628239						C	
CC01466	unknown	2L:220632	-	Protein	3	chr2L:220632	CG3696	RA	intron	12	Yes	C	C
CC01466	unknown	2L:220632	-	Protein	3	chr2L:220632	CG3696	RB	intron	1	Yes	C	C
CC01469	CG8367	2R:9240450	+	Protein	3	chr2R:10063184	CG8367	RA	intron	2	Yes	C	C
CC01469	CG8367	2R:9240450	+	Protein	3	chr2R:10063184	CG8367	RB	intron	1	Yes	C	C
CC01469	CG8367	2R:9240450	+	Protein	3	chr2R:10063184	CG8367	RC	intron	2	No	C	
CC01469	CG8367	2R:9240450	+	Protein	3	chr2R:10063184	CG8367	RD	intron	1	Yes	C	C
CC01469	CG8367	2R:9240450	+	Protein	3	chr2R:10063184	CG8367	RE	intron	1	Yes	C	C
CC01469	CG8367	2R:9240450	+	Protein	3	chr2R:10063184	CG8367	RF	intron	1	Yes	C	C
CC01469	CG8367	2R:9240450	+	Protein	3	chr2R:10063184	CG8367	RG	intron	1	Yes	C	C
CC01481	CG10777	X:7669621	-	Enhancer	3	chrX:7824708	CG10777	RB	intron	1	No	C	
CC01488	CG11455	2L:129377	+	Novel	3	chr2L:129377						C	
CC01491	CG1910	3R:27563228	+	Protein	3	chr3R:27573862	CG1910	RA	intron	1	Yes	C	C
CC01491	CG1910	3R:27563228	+	Protein	3	chr3R:27573862	CG1910	RB	intron	1	No	C	
CC01493	CG8649	X:17022713	-	Protein	3	chrX:17185787	CG8649	RA	intron	1	Yes	C	C
CC01493	CG8649	X:17022713	-	Protein	3	chrX:17185787	CG8649	RC	intron	2	Yes	C	C
CC01518	CG7379	3R:13620333	-	Novel	3	chr3R:13620318						C	
CC01521	unknown	X:9292736	-	Novel	3	chrX:9447785						C	
CC01529	CG14450	3L:22645402	-	Enhancer?	3	chr3L:22721224						C	
CC01536	CG8290	2R:7035236	+	Enhancer?	3	chr2R:7858028						C	
CC01548	CG14200	X:19241296	+	Enhancer	3	chrX:19404369	CG14200	RA	intron	2	Yes	C	A
CC01563	CG9983	3R:24415335	+	Protein	3	chr3R:24425969	CG9983	RA	intron	1	Yes	C	C
CC01563	CG9983	3R:24415335	+	Protein	3	chr3R:24425969	CG9983	RE	intron	1	Yes	C	C
CC01566	CG9252	2L:21121068	-	Protein?	3	chr2L:21151324						C	
CC01583	CG10539	3L:5769170	-	Protein	3	chr3L:5802962	CG10539	RA	intron	1	Yes	C	C
CC01586	unknown	3R:5176812	+	Enhancer	3	chr3R:5176796	CG33936	RA	intron	2	No	C	
CC01586	unknown	3R:5176812	+	Enhancer	3	chr3R:5176796	CG33936	RB	intron	1	No	C	
CC01591	CG18490	3L:11173293	+	Enhancer?	3	chr3L:11208861	CG18490	RB	intron	1	No	C	
CC01593	CG16987	2L:2800690	-	Enhancer	3	chr2L:2808121						C	
CC01620	unknown	2R:19947480	-	Protein?	3	chr2R:20791433	CG30425	RA	exon	1	No	C	
CC01626	CG15792	2R:20052892	-	Protein	3	chr2R:20896845	CG15792	RA	intron	2	Yes	C	C
CC01626	CG15792	2R:20052892	-	Protein	3	chr2R:20896845	CG15792	RB	intron	2	Yes	C	C
CC01626	CG15792	2R:20052892	-	Protein	3	chr2R:20896845	CG15792	RC	intron	2	Yes	C	C
CC01626	CG15792	2R:20052892	-	Protein	3	chr2R:20896845	CG15792	RD	intron	2	Yes	C	C
CC01646	CG13920	3L:1631139	+	Protein	3	chr3L:1650510	CG13920	RA	intron	1	Yes	C	C
CC01654	unknown	2R:4331237	-	Protein	3	chr2R:5157995	CG2049	RB	intron	2	Yes	C	C
CC01654	unknown	2R:4331237	-	Protein	3	chr2R:5157995	CG2049	RC	intron	2	Yes	C	C
CC01654	unknown	2R:4331237	-	Protein	3	chr2R:5157995	CG2049	RD	intron	2	Yes	C	C
CC01654	unknown	2R:4331237	-	Protein	3	chr2R:5157995	CG2049	RF	intron	2	Yes	C	C
CC01661	CG30398	2R:16761260	+	Novel	3	chr2R:17605214						C	
CC01665	unknown	3L:19780004	+	Novel	3	chr3L:19854565						C	
CC01675	CG32085	3L:11641670	-	Novel	3	chr3L:11677222						C	
CC01684	CG6202	3R:11171309	-	Protein	3	chr3R:11171291	CG6202	RA	intron	1	Yes	C	C
CC01684	CG6202	3R:11171309	-	Protein	3	chr3R:11171291	CG6202	RB	intron	2	Yes	C	C
CC01687	CG12010	3L:3354832	+	Enhancer?	3	chr3L:3374203						C	
CC01698	CG5524	3R:20009811	-	Enhancer	3	chr3R:20019154						C	
CC01700	CG4790	X:5705922	-	Enhancer?	3	chrX:5859579						C	
CC01710	CG4898	3R:11116141	+	Protein	3	chr3R:11116123	CG4898	RB	intron	3	Yes	C	C
CC01710	CG4898	3R:11116141	+	Protein	3	chr3R:11116123	CG4898	RC	intron	1	Yes	C	C
CC01710	CG4898	3R:11116141	+	Protein	3	chr3R:11116123	CG4898	RD	intron	3	Yes	C	C
CC01710	CG4898	3R:11116141	+	Protein	3	chr3R:11116123	CG4898	RE	intron	5	Yes	C	C
CC01710	CG4898	3R:11116141	+	Protein	3	chr3R:11116123	CG4898	RF	intron	3	Yes	C	C
CC01710	CG4898	3R:11116141	+	Protein	3	chr3R:11116123	CG4898	RG	intron	3	Yes	C	C
CC01710	CG4898	3R:11116141	+	Protein	3	chr3R:11116123	CG4898	RH	intron	3	Yes	C	C
CC01710	CG4898	3R:11116141	+	Protein	3	chr3R:11116123	CG4898	RI	intron	2	Yes	C	C
CC01710	CG4898	3R:11116141	+	Protein	3	chr3R:11116123	CG4898	RJ	intron	3	Yes	C	C
CC01710	CG4898	3R:11116141	+	Protein	3	chr3R:11116123	CG4898	RK	intron	3	Yes	C	C
CC01710	CG4898	3R:11116141	+	Protein	3	chr3R:11116123	CG4898	RL	intron	3	Yes	C	C
CC01711	CG2212	X:7706201	-	Protein	3	chrX:7861288	CG2212	RA	intron	1	Yes	C	C
CC01722	CG8327	3R:5456529	+	Novel	3	chr3R:5456513						C	
CC01777	CG2556	X:12227848	+	Enhancer?	3	chrX:12391221	CG2556	RA	exon	1	No	C	
CC01786	CG10542	3L:5753520	-	Enhancer	3	chr3L:5787312						C	
CC01811	CG7752	3L:21203421	+	Novel	3	chr3L:21279245	CG7752	RA	exon	1	No	C	
CC01823	CG8582	3L:7328193	-	Protein	3	chr3L:7361764	CG8582	RA	intron	2	Yes	C	C
CC01823	CG8582	3L:7328193	-	Protein	3	chr3L:7361764	CG8582	RB	intron	1	Yes	C	C
CC01828	CG7264	3L:11790771	+	Novel	3	chr3L:11826323						C	
CC01831	unknown	3R:4757626	-	Enhancer?	3	chr3R:4757611						C	
CC01844	CG9088	2L:5992399	-	Enhancer?	3	chr2L:6000184						C	
CC01846	CG3510	2R:17850053	-	Protein	3	chr2R:18694008	CG3510	RA	intron	1	Yes	C	C
CC01846	CG3510	2R:17850053	-	Protein	3	chr2R:18694008	CG3510	RB	exon	1	No	C	
CC01846	CG3510	2R:17850053	-	Protein	3	chr2R:18694008	CG3510	RD	intron	1	Yes	C	C
CC01857	CG7004	3L:300621	-	Enhancer?	3	chr3L:319991						C	
CC01885	CG11115	3L:22795461	+	Enhancer?	3	chr3L:22871283						C	
CC01893	CG6156	3R:11191542	-	Enhancer	3	chr3R:11191524	CG34404	RC	exon	4	Yes	C	
CC01893	CG6156	3R:11191542	-	Enhancer	3	chr3R:11191524	CG34404	RD	exon	4	Yes	C	
CC01893	CG6156	3R:11191542	-	Enhancer	3	chr3R:11191524	CG34404	RE	exon	3	Yes	C	
CC01915	CG7425	3R:10565110	-	Protein	3	chr3R:10565092	CG7425	RA	intron	2	Yes	C	C
CC01920	CG1475	3R:1449807	+	Protein?	3	chr3R:1449810						C	
CC01921	CG10582	3L:20949120	+	Protein?	3	chr3L:21024944	CG10582	RA	exon	1	No	C	
CC01924	CG2238	2L:21514815	-	Protein	3	chr2L:21681694	CG2238	RA	intron	1	Yes	C	C
CC01924	CG2238	2L:21514815	-	Protein	3	chr2L:21681694	CG2238	RB	exon	1	No	C	
CC01924	CG2238	2L:21514815	-	Protein	3	chr2L:21681694	CG2238	RC	intron	1	No	C	
CC01925	CG10128	2R:9667578	-	Protein	3	chr2R:10491357	CG10128	RA	intron	2	Yes	C	B
CC01925	CG10128	2R:9667578	-	Protein	3	chr2R:10491357	CG10128	RB	intron	2	Yes	C	B
CC01925	CG10128	2R:9667578	-	Protein	3	chr2R:10491357	CG10128	RC	exon	3	No	C	
CC01925	CG10128	2R:9667578	-	Protein	3	chr2R:10491357	CG10128	RD	exon	1	No	C	
CC01925	CG10128	2R:9667578	-	Protein	3	chr2R:10491357	CG10128	RE	exon	1	No	C	
CC01925	CG10128	2R:9667578	-	Protein	3	chr2R:10491357	CG10128	RF	intron	2	Yes	C	B
CC01925	CG10128	2R:9667578	-	Protein	3	chr2R:10491357	CG10128	RG	intron	2	Yes	C	B
CC01927	CG15072	2R:13752773	+	Enhancer?	3	chr2R:14576558	CG15072	RA	intron	1	No	C	
CC01927	CG15072	2R:13752773	+	Enhancer?	3	chr2R:14576558	CG15072	RB	intron	1	No	C	
CC01927	CG15072	2R:13752773	+	Enhancer?	3	chr2R:14576558	CG15072	RC	intron	1	No	C	
CC01936	CG1725	X:11134180	+	Protein	3	chrX:11286274	CG1725	RA	intron	1	Yes	C	C
CC01936	CG1725	X:11134180	+	Protein	3	chrX:11286274	CG1725	RB	intron	6	Yes	C	C
CC01936	CG1725	X:11134180	+	Protein	3	chrX:11286274	CG1725	RD	intron	2	Yes	C	C
CC01936	CG1725	X:11134180	+	Protein	3	chrX:11286274	CG1725	RE	intron	2	Yes	C	C
CC01936	CG1725	X:11134180	+	Protein	3	chrX:11286274	CG1725	RF	intron	5	Yes	C	C
CC01936	CG1725	X:11134180	+	Protein	3	chrX:11286274	CG1725	RG	intron	2	Yes	C	C
CC01936	CG1725	X:11134180	+	Protein	3	chrX:11286274	CG1725	RH	intron	5	Yes	C	C
CC01936	CG1725	X:11134180	+	Protein	3	chrX:11286274	CG1725	RK	intron	2	Yes	C	C
CC01936	CG1725	X:11134180	+	Protein	3	chrX:11286274	CG1725	RL	intron	5	Yes	C	C
CC01941	CG5055	X:16909508	+	Protein	3	chrX:17072582	CG5055	RA	intron	1	Yes	C	C
CC01950	CG13366	X:376973	-	Enhancer	3	chrX:513569	CG13366	RA	intron	1	No	C	
CC01951	CG17064	2R:8566799	+	Enhancer	3	chr2R:9389590						C	
CC01958	CG32476	3L:227641	+	Protein?	3	chr3L:247011						C	
CC01961	CG4376	X:1790071	-	Protein	3	chrX:1927332	CG4376	RA	intron	2	Yes	C	C
CC01961	CG4376	X:1790071	-	Protein	3	chrX:1927332	CG4376	RB	intron	2	Yes	C	C
CC01961	CG4376	X:1790071	-	Protein	3	chrX:1927332	CG4376	RC	intron	2	Yes	C	C
CC01978	CG2304	3R:25318591	-	Protein?	3	chr3R:25329225	CG2304	RA	exon	1	No	C	
CC01978	CG2304	3R:25318591	-	Protein?	3	chr3R:25329225	CG2304	RB	exon	1	No	C	
CC01978	CG2304	3R:25318591	-	Protein?	3	chr3R:25329225	CG2304	RD	exon	1	No	C	
CC01981	unknown	2R:14527240	+	Novel	3	chr2R:15351025	CG8201	RA	intron	2	Yes	C	C
CC01981	unknown	2R:14527240	+	Novel	3	chr2R:15351025	CG8201	RB	intron	2	Yes	C	C
CC01981	unknown	2R:14527240	+	Novel	3	chr2R:15351025	CG8201	RD	intron	1	No	C	
CC01981	unknown	2R:14527240	+	Novel	3	chr2R:15351025	CG8201	RE	intron	1	No	C	
CC01981	unknown	2R:14527240	+	Novel	3	chr2R:15351025	CG8201	RF	intron	1	No	C	
CC01981	unknown	2R:14527240	+	Novel	3	chr2R:15351025	CG8201	RH	intron	1	No	C	
CC01981	unknown	2R:14527240	+	Novel	3	chr2R:15351025	CG8201	RI	intron	1	No	C	
CC01981	unknown	2R:14527240	+	Novel	3	chr2R:15351025	CG8201	RJ	intron	1	No	C	
CC01981	unknown	2R:14527240	+	Novel	3	chr2R:15351025	CG8201	RL	intron	2	Yes	C	C
CC01981	unknown	2R:14527240	+	Novel	3	chr2R:15351025	CG8201	RN	intron	2	Yes	C	C
CC01981	unknown	2R:14527240	+	Novel	3	chr2R:15351025	CG8201	RO	intron	1	No	C	
CC01981	unknown	2R:14527240	+	Novel	3	chr2R:15351025	CG8201	RQ	intron	1	No	C	
CC01995	CG7437	3L:21834002	+	Protein	3	chr3L:21909824	CG7437	RA	intron	7	Yes	C	C
CC01995	CG7437	3L:21834002	+	Protein	3	chr3L:21909824	CG7437	RB	intron	7	Yes	C	C
CC01995	CG7437	3L:21834002	+	Protein	3	chr3L:21909824	CG7437	RC	intron	7	Yes	C	C
CC01995	CG7437	3L:21834002	+	Protein	3	chr3L:21909824	CG7437	RD	intron	7	Yes	C	C
CC01997	CG6413	3R:20149731	+	Enhancer?	3	chr3R:20159074						C	
CC02013	CG8068	2R:4177833	+	Protein	3	chr2R:5004591	CG8068	RA	intron	1	No	C	
CC02013	CG8068	2R:4177833	+	Protein	3	chr2R:5004591	CG8068	RB	intron	1	No	C	
CC02013	CG8068	2R:4177833	+	Protein	3	chr2R:5004591	CG8068	RC	exon	1	No	C	
CC02013	CG8068	2R:4177833	+	Protein	3	chr2R:5004591	CG8068	RD	intron	1	Yes	C	C
CC02013	CG8068	2R:4177833	+	Protein	3	chr2R:5004591	CG8068	RE	intron	1	No	C	
CC02013	CG8068	2R:4177833	+	Protein	3	chr2R:5004591	CG8068	RF	exon	1	No	C	
CC02013	CG8068	2R:4177833	+	Protein	3	chr2R:5004591	CG8068	RG	exon	1	No	C	
CC02013	CG8068	2R:4177833	+	Protein	3	chr2R:5004591	CG8068	RH	intron	1	Yes	C	C
CC02013	CG8068	2R:4177833	+	Protein	3	chr2R:5004591	CG8068	RI	intron	1	Yes	C	C
CC02024	CG8804	2R:4474126	-	Enhancer	3	chr2R:5300999						C	
CC02027	CG17927	2L:16764907	+	Protein	3	chr2L:16786823	CG17927	RA	intron	16	Yes	C	C
CC02027	CG17927	2L:16764907	+	Protein	3	chr2L:16786823	CG17927	RB	intron	16	Yes	C	C
CC02027	CG17927	2L:16764907	+	Protein	3	chr2L:16786823	CG17927	RC	intron	16	Yes	C	C
CC02027	CG17927	2L:16764907	+	Protein	3	chr2L:16786823	CG17927	RD	intron	16	Yes	C	C
CC02027	CG17927	2L:16764907	+	Protein	3	chr2L:16786823	CG17927	RE	intron	16	Yes	C	C
CC02027	CG17927	2L:16764907	+	Protein	3	chr2L:16786823	CG17927	RF	intron	16	Yes	C	C
CC02027	CG17927	2L:16764907	+	Protein	3	chr2L:16786823	CG17927	RG	intron	16	Yes	C	C
CC02027	CG17927	2L:16764907	+	Protein	3	chr2L:16786823	CG17927	RH	intron	16	Yes	C	C
CC02027	CG17927	2L:16764907	+	Protein	3	chr2L:16786823	CG17927	RI	intron	16	Yes	C	C
CC02027	CG17927	2L:16764907	+	Protein	3	chr2L:16786823	CG17927	RJ	intron	16	Yes	C	C
CC02027	CG17927	2L:16764907	+	Protein	3	chr2L:16786823	CG17927	RK	intron	16	Yes	C	C
CC02027	CG17927	2L:16764907	+	Protein	3	chr2L:16786823	CG17927	RL	intron	16	Yes	C	C
CC02027	CG17927	2L:16764907	+	Protein	3	chr2L:16786823	CG17927	RM	intron	16	Yes	C	C
CC02043	CG5394	3R:19775261	-	Protein	3	chr3R:19784604						C	
CC02048	CG31628	2L:7016214	-	Protein	3	chr2L:7023983						C	
CC02055	CG10897	2R:6678227	-	Enhancer?	3	chr2R:7501019	CG10897	RA	intron	1	No	C	
CC02055	CG10897	2R:6678227	-	Enhancer?	3	chr2R:7501019	CG10897	RE	intron	1	No	C	
CC02057	CG4898	3R:11113781	+	Protein	3	chr3R:11113763	CG4898	RB	intron	3	Yes	C	C
CC02057	CG4898	3R:11113781	+	Protein	3	chr3R:11113763	CG4898	RC	exon	1	No	C	
CC02057	CG4898	3R:11113781	+	Protein	3	chr3R:11113763	CG4898	RD	intron	3	Yes	C	C
CC02057	CG4898	3R:11113781	+	Protein	3	chr3R:11113763	CG4898	RE	intron	4	Yes	C	A
CC02057	CG4898	3R:11113781	+	Protein	3	chr3R:11113763	CG4898	RF	intron	3	Yes	C	C
CC02057	CG4898	3R:11113781	+	Protein	3	chr3R:11113763	CG4898	RG	intron	3	Yes	C	C
CC02057	CG4898	3R:11113781	+	Protein	3	chr3R:11113763	CG4898	RH	intron	2	Yes	C	A
CC02057	CG4898	3R:11113781	+	Protein	3	chr3R:11113763	CG4898	RI	exon	1	No	C	
CC02057	CG4898	3R:11113781	+	Protein	3	chr3R:11113763	CG4898	RJ	intron	3	Yes	C	C
CC02057	CG4898	3R:11113781	+	Protein	3	chr3R:11113763	CG4898	RK	intron	3	Yes	C	C
CC02057	CG4898	3R:11113781	+	Protein	3	chr3R:11113763	CG4898	RL	intron	3	Yes	C	C
CC02069	CG9277	2R:14514778	-	Protein	3	chr2R:15338563	CG9277	RB	intron	1	Yes	C	C
CC02069	CG9277	2R:14514778	-	Protein	3	chr2R:15338563	CG9277	RC	intron	1	No	C	
CC02069	CG9277	2R:14514778	-	Protein	3	chr2R:15338563	CG9277	RD	intron	1	No	C	
CC06005	CG4722	2L:9976569	+	Enhancer	3	chr2L:9984160						C	
CC06018	unknown	2L:4993453	-	Enhancer	3	chr2L:5000882	CG33113	RB	intron	3	Yes	C	A
CC06018	unknown	2L:4993453	-	Enhancer	3	chr2L:5000882	CG33113	RE	intron	2	Yes	C	A
CC06018	unknown	2L:4993453	-	Enhancer	3	chr2L:5000882	CG33113	RF	intron	1	Yes	C	A
CC06020	CG11968	3R:4810026	-	Protein?	3	chr3R:4810011	CG11968	RA	exon	1	No	C	
CC06023	CG1620	2R:2557133	-	Enhancer	3	chr2R:3383737	CG1620	RA	exon	1	Yes	C	
CC06033	CG12749	3R:9485990	-	Protein	3	chr3R:9485971	CG12749	RA	intron	1	Yes	C	C
CC06033	CG12749	3R:9485990	-	Protein	3	chr3R:9485971	CG12749	RB	intron	1	Yes	C	C
CC06035	CG17077	3R:19162960	-	Enhancer	3	chr3R:19172303						C	
CC06039	CG14792	X:1239206	-	Novel	3	chrX:1375802						C	
CC06049	CG6363	3R:11117398	-	Novel	3	chr3R:11117380						C	
CC06052	unknown	2L:5088899	-	Enhancer	3	chr2L:5096328						C	
CC06063	CG6767	3L:9652176	-	Enhancer?	3	chr3L:9687747	CG6767	RA	intron	1	No	C	
CC06063	CG6767	3L:9652176	-	Enhancer?	3	chr3L:9687747	CG6767	RB	intron	1	Yes	C	A
CC06066	CG12971	3L:21299344	-	Enhancer?	3	chr3L:21375168						C	
CC06073	CG10372	2L:18686971	-	Protein?	3	chr2L:18708888						C	
CC06078	unknown	X:3047294	+	Novel	3	chrX:3182889	CG32498	RB	intron	4	Yes	C	B
CC06078	unknown	X:3047294	+	Novel	3	chrX:3182889	CG32498	RC	intron	3	Yes	C	B
CC06078	unknown	X:3047294	+	Novel	3	chrX:3182889	CG32498	RD	intron	3	Yes	C	B
CC06078	unknown	X:3047294	+	Novel	3	chrX:3182889	CG32498	RI	intron	3	Yes	C	B
CC06078	unknown	X:3047294	+	Novel	3	chrX:3182889	CG32498	RJ	intron	3	Yes	C	B
CC06078	unknown	X:3047294	+	Novel	3	chrX:3182889	CG32498	RK	intron	3	Yes	C	B
CC06078	unknown	X:3047294	+	Novel	3	chrX:3182889	CG32498	RO	intron	4	Yes	C	B
CC06089	CG3167	2R:19077837	+	Novel	3	chr2R:19921792	CG3167	RA	exon	1	No	C	
CC06089	CG3167	2R:19077837	+	Novel	3	chr2R:19921792	CG3167	RB	exon	1	No	C	
CC06102	CG6817	3L:8484259	+	Enhancer	3	chr3L:8518649	CG6817	RA	exon	1	No	C	
CC06116	CG9884	2L:2486757	+	Protein	3	chr2L:2494190	CG9884	RA	intron	1	Yes	C	C
CC06116	CG9884	2L:2486757	+	Protein	3	chr2L:2494190	CG9884	RB	intron	1	Yes	C	C
CC06116	CG9884	2L:2486757	+	Protein	3	chr2L:2494190	CG9884	RC	intron	1	Yes	C	C
CC06116	CG9884	2L:2486757	+	Protein	3	chr2L:2494190	CG9884	RD	intron	1	Yes	C	C
CC06117	CG3979	3L:18782845	-	Protein	3	chr3L:18827066	CG3979	RA	intron	1	No	C	
CC06117	CG3979	3L:18782845	-	Protein	3	chr3L:18827066	CG3979	RB	intron	1	Yes	C	C
CC06117	CG3979	3L:18782845	-	Protein	3	chr3L:18827066	CG3979	RC	intron	1	No	C	
CC06119	CG9809	3R:255033	-	Protein	3	chr3R:255034	CG9809	RA	exon	1	No	C	
CC06119	CG9809	3R:255033	-	Protein	3	chr3R:255034	CG9809	RB	exon	1	No	C	
CC06119	CG9809	3R:255033	-	Protein	3	chr3R:255034	CG9809	RC	exon	1	No	C	
CC06123	CG8095	2R:10316340	+	Enhancer?	3	chr2R:11140120	CG8095	RB	intron	1	Yes	C	B
CC06124	CG3523	2L:3051964	+	Enhancer?	3	chr2L:3059395	CG3523	RA	intron	1	No	C	
CC06132	unknown	3L:10640773	+	Enhancer	3	chr3L:10676344	CG32067	RA	intron	1	No	C	
CC06132	unknown	3L:10640773	+	Enhancer	3	chr3L:10676344	CG32067	RB	intron	2	No	C	
CC06132	unknown	3L:10640773	+	Enhancer	3	chr3L:10676344	CG32067	RC	intron	1	No	C	
CC06135	CG12785	3R:12098121	-	Protein	3	chr3R:12098103	CG12785	RA	exon	1	No	C	
CC06151	unknown	2R:6296706	-	Protein?	3	chr2R:7119482	CG30021	RA	intron	1	No	C	
CC06156	CG2204	2R:5504915	+	Enhancer	3	chr2R:6331787	CG2204	RB	intron	2	Yes	C	A
CC06156	CG2204	2R:5504915	+	Enhancer	3	chr2R:6331787	CG2204	RC	intron	2	No	C	
CC06156	CG2204	2R:5504915	+	Enhancer	3	chr2R:6331787	CG2204	RD	intron	2	Yes	C	A
CC06156	CG2204	2R:5504915	+	Enhancer	3	chr2R:6331787	CG2204	RE	intron	2	Yes	C	A
CC06156	CG2204	2R:5504915	+	Enhancer	3	chr2R:6331787	CG2204	RF	intron	2	Yes	C	A
CC06156	CG2204	2R:5504915	+	Enhancer	3	chr2R:6331787	CG2204	RG	intron	2	Yes	C	A
CC06156	CG2204	2R:5504915	+	Enhancer	3	chr2R:6331787	CG2204	RH	intron	1	Yes	C	A
CC06157	CG7269	2L:5534507	-	Protein?	3	chr2L:5542292	CG7269	RA	exon	1	No	C	
CC06157	CG7269	2L:5534507	-	Protein?	3	chr2L:5542292	CG7269	RC	exon	1	No	C	
CC06167	CG11550	3R:27540119	-	Novel	3	chr3R:27550753						C	
CC06169	CG10160	3L:6222559	-	Enhancer?	3	chr3L:6256130						C	
CC06172	CG1975	2R:4353433	+	Protein?	3	chr2R:5180191	CG1975	RA	exon	1	No	C	
CC06183	CG8725	2R:3032888	+	Enhancer?	3	chr2R:3859492						C	
CC06204	CG5789	3R:20360316	-	Enhancer?	3	chr3R:20369659						C	
CC06205	CG8379	3R:4650187	+	Protein?	3	chr3R:4650172	CG8379	RA	exon	1	No	C	
CC06205	CG8379	3R:4650187	+	Protein?	3	chr3R:4650172	CG8379	RB	exon	1	No	C	
CC06212	CG9381	3R:5377516	-	Enhancer?	3	chr3R:5377500	CG9381	RA	exon	1	No	C	
CC06212	CG9381	3R:5377516	-	Enhancer?	3	chr3R:5377500	CG9381	RC	exon	1	No	C	
CC06213	CG11375	3R:20621661	-	Enhancer?	3	chr3R:20631004						C	
CC06216	CG8384	3R:21856855	+	Enhancer	3	chr3R:21867490	CG8384	RB	exon	1	No	C	
CC06216	CG8384	3R:21856855	+	Enhancer	3	chr3R:21867490	CG8384	RE	exon	1	No	C	
CC06221	CG11523	3L:22184748	-	Novel	3	chr3L:22260570						C	
CC06230	CG14066	3R:24141153	-	Novel	3	chr3R:24151787	CG14066	RA	intron	1	No	C	
CC06230	CG14066	3R:24141153	-	Novel	3	chr3R:24151787	CG14066	RB	intron	1	No	C	
CC06230	CG14066	3R:24141153	-	Novel	3	chr3R:24151787	CG14066	RC	intron	1	No	C	
CC06231	unknown	3L:13980387	-	Enhancer?	3	chr3L:14024607	CG6513	RA	exon	1	No	C	
CC06231	unknown	3L:13980387	-	Enhancer?	3	chr3L:14024607	CG6513	RB	exon	1	No	C	
CC06235	CG4463	3L:9341999	+	Novel	3	chr3L:9376389						C	
CC06237	CG32177	3L:17599500	-	Novel	3	chr3L:17643721	CG32177	RA	intron	1	No	C	
CC06237	CG32177	3L:17599500	-	Novel	3	chr3L:17643721	CG32179	RA	exon	2	No	C	
CC06238	CG11963	3R:4764719	+	Protein	3	chr3R:4764704	CG11963	RA	intron	2	Yes	C	C
CC06238	CG11963	3R:4764719	+	Protein	3	chr3R:4764704	CG11963	RB	intron	1	Yes	C	C
CC06279	CG8815	2R:7653008	-	Enhancer?	3	chr2R:8475800	CG8815	RA	intron	1	No	C	
CC06279	CG8815	2R:7653008	-	Enhancer?	3	chr2R:8475800	CG8815	RB	intron	1	No	C	
CC06279	CG8815	2R:7653008	-	Enhancer?	3	chr2R:8475800	CG8815	RC	intron	1	No	C	
CC06279	CG8815	2R:7653008	-	Enhancer?	3	chr2R:8475800	CG8815	RD	intron	1	No	C	
CC06282	CG3971	3L:16610525	-	Protein?	3	chr3L:16654745						C	
CC06297	unknown	3L:7341696	-	Enhancer?	3	chr3L:7375267						C	
CC06306	CG1943	3R:2900666	+	Enhancer?	3	chr3R:2900665	CG1943	RA	exon	1	No	C	
CC06325	CG10120	3R:8545144	-	Protein	3	chr3R:8545125	CG10120	RA	exon	2	Yes	C	
CC06325	CG10120	3R:8545144	-	Protein	3	chr3R:8545125	CG10120	RB	exon	2	Yes	C	
CC06326	CG18468	2R:12494623	+	Enhancer?	3	chr2R:13318403						C	
CC06339	CG1258	3L:4223269	+	Novel	3	chr3L:4242643						C	
CC06341	CG1925	2R:2854130	+	Protein?	3	chr2R:3680734						C	
CC06344	CG1817	X:11379178	+	Protein	3	chrX:11538719	CG1817	RA	intron	2	Yes	C	C
CC06344	CG1817	X:11379178	+	Protein	3	chrX:11538719	CG1817	RB	intron	2	Yes	C	C
CC06344	CG1817	X:11379178	+	Protein	3	chrX:11538719	CG1817	RD	intron	2	Yes	C	C
CC06354	CG9699	X:16426209	-	Enhancer?	3	chrX:16589222						C	
CC06355	CG5654	3L:12082665	-	Novel	3	chr3L:12118218						C	
CC06381	CG10365	3R:19539216	+	Enhancer?	3	chr3R:19548559						C	
CC06389	CG15611	2R:12172552	+	Enhancer?	3	chr2R:12996332						C	
G00007	CG3161	2R:1692752	-	Protein	3	chr2R:2519355	CG3161	RA	intron	2	Yes	A	A
G00007	CG3161	2R:1692752	-	Protein	3	chr2R:2519355	CG3161	RB	intron	2	Yes	A	A
G00007	CG3161	2R:1692752	-	Protein	3	chr2R:2519355	CG3161	RC	intron	1	Yes	A	A
G00007	CG3161	2R:1692752	-	Protein	3	chr2R:2519355	CG3161	RD	intron	2	Yes	A	A
G00015	CG2621	X:2415591	+	Protein	3	chrX:2552852	CG2621	RA	intron	2	Yes		A
G00015	CG2621	X:2415591	+	Protein	3	chrX:2552852	CG2621	RB	intron	2	Yes		A
G00015	CG2621	X:2415591	+	Protein	3	chrX:2552852	CG2621	RC	intron	2	Yes		A
G00015	CG2621	X:2415591	+	Protein	3	chrX:2552852	CG2621	RD	exon	1	No		
G00015	CG2621	X:2415591	+	Protein	3	chrX:2552852	CG2621	RE	intron	2	Yes		A
G00015	CG2621	X:2415591	+	Protein	3	chrX:2552852	CG2621	RF	intron	2	Yes		A
G00015	CG2621	X:2415591	+	Protein	3	chrX:2552852	CG2621	RG	intron	1	Yes		A
G00015	CG2621	X:2415591	+	Protein	3	chrX:2552852	CG2621	RH	intron	2	Yes		A
G00015	CG2621	X:2415591	+	Protein	3	chrX:2552852	CG2621	RI	intron	3	Yes		A
G00015	CG2621	X:2415591	+	Protein	3	chrX:2552852	CG2621	RJ	intron	4	Yes		A
G00015	CG2621	X:2415591	+	Protein	3	chrX:2552852	CG2621	RK	intron	1	No		
G00019	CG5461	2L:12471743	-	Protein	3	chr2L:12482872	CG5461	RA	intron	3	Yes		B
G00019	CG5461	2L:12471743	-	Protein	3	chr2L:12482872	CG5461	RB	exon	1	No		
G00019	CG5461	2L:12471743	-	Protein	3	chr2L:12482872	CG5461	RD	intron	1	Yes		B
G00019	CG5461	2L:12471743	-	Protein	3	chr2L:12482872	CG5461	RE	intron	2	Yes		B
G00019	CG5461	2L:12471743	-	Protein	3	chr2L:12482872	CG5461	RF	intron	5	Yes		B
G00020	CG32676	X:10485154	-	Enhancer	3	chrX:10638972							
G00024	CG32701	X:9292411	-	Protein	4	chrX:9341223	CG34339	RA	intron	2	Yes		A
G00024	CG32701	X:9292411	-	Protein	4	chrX:9341223	CG34339	RB	intron	2	Yes		A
G00032	CG2151	X:7982495	+	Protein	3	chrX:8137582	CG2151	RA	intron	1	Yes		A
G00035	CG15926	X:12202383	+	Protein	4	chrX:12262479							
G00050	CG8472	2R:7324017	-	Protein	3	chr2R:8146809							
G00053	CG1915	3L:2088375	-	Protein	3	chr3L:2107746	CG1915	RA	intron	2	Yes	B	A
G00053	CG1915	3L:2088375	-	Protein	3	chr3L:2107746	CG1915	RC	intron	2	Yes	B	A
G00060	unknown	3L:10694553	-	Protein	3	chr3L:10730124							
G00071	CG33113	2L:4992919	-	Protein	3	chr2L:5000348	CG33113	RB	intron	3	Yes		A
G00071	CG33113	2L:4992919	-	Protein	3	chr2L:5000348	CG33113	RE	intron	2	Yes		A
G00071	CG33113	2L:4992919	-	Protein	3	chr2L:5000348	CG33113	RF	intron	1	Yes		A
G00080	CG1691	X:10543739	-	Protein	3	chrX:10695992	CG1691	RA	intron	2	Yes		B
G00080	CG1691	X:10543739	-	Protein	3	chrX:10695992	CG1691	RB	intron	2	Yes		B
G00080	CG1691	X:10543739	-	Protein	3	chrX:10695992	CG1691	RC	intron	2	Yes		B
G00080	CG1691	X:10543739	-	Protein	3	chrX:10695992	CG1691	RD	intron	2	Yes		B
G00080	CG1691	X:10543739	-	Protein	3	chrX:10695992	CG1691	RE	intron	2	Yes		B
G00080	CG1691	X:10543739	-	Protein	3	chrX:10695992	CG1691	RF	intron	2	Yes		B
G00080	CG1691	X:10543739	-	Protein	3	chrX:10695992	CG1691	RG	intron	2	Yes		B
G00080	CG1691	X:10543739	-	Protein	3	chrX:10695992	CG1691	RH	intron	3	Yes		B
G00082	CG31196	3R:14070016	+	Protein	3	chr3R:14070000	CG31196	RA	intron	1	Yes		A
G00082	CG31196	3R:14070016	+	Protein	3	chr3R:14070000	CG31196	RB	intron	1	Yes		A
G00082	CG31196	3R:14070016	+	Protein	3	chr3R:14070000	CG31196	RC	intron	1	Yes		A
G00082	CG31196	3R:14070016	+	Protein	3	chr3R:14070000	CG31196	RD	intron	1	Yes		A
G00093	CG10990	X:13478069	-	Protein	3	chrX:13641443	CG10990	RA	intron	3	Yes	B	B
G00093	CG10990	X:13478069	-	Protein	3	chrX:13641443	CG10990	RB	intron	4	Yes	B	B
G00102	CG32549	X:18136273	-	Protein	3	chrX:18299347	CG32549	RA	intron	4	Yes		B
G00102	CG32549	X:18136273	-	Protein	3	chrX:18299347	CG32549	RB	intron	4	Yes		B
G00102	CG32549	X:18136273	-	Protein	3	chrX:18299347	CG32549	RD	intron	2	Yes		B
G00102	CG32549	X:18136273	-	Protein	3	chrX:18299347	CG32549	RF	intron	3	Yes		B
G00108	CG10677	3L:5143610	+	Protein	3	chr3L:5177401						C	
G00120	unknown	2L:5101005	+	Protein	3	chr2L:5108434							
G00126	CG10072	3L:6923844	+	Protein	3	chr3L:6957415						B	
G00129	unknown	2L:5101008	+	Protein	3	chr2L:5108437						A	
G00131	unknown	2R:11921049	+	Protein	3	chr2R:12744829	CG5935	RA	intron	2	Yes		A
G00131	unknown	2R:11921049	+	Protein	3	chr2R:12744829	CG5935	RB	intron	1	Yes		A
G00131	unknown	2R:11921049	+	Protein	3	chr2R:12744829	CG5935	RC	intron	2	Yes		A
G00131	unknown	2R:11921049	+	Protein	3	chr2R:12744829	CG5935	RD	intron	2	Yes		A
G00140	CG10686	3L:12473327	+	Protein	3	chr3L:12508880	CG10686	RA	intron	1	Yes		A
G00145	CG14478	2R:12525690	+	Enhancer	3	chr2R:13349470	CG14478	RA	intron	1	No	B	
G00145	CG14478	2R:12525690	+	Enhancer	3	chr2R:13349470	CG14478	RB	intron	1	No	B	
G00152	CG1691	X:10548569	-	Protein	3	chrX:10700822	CG1691	RA	exon	1	No		
G00152	CG1691	X:10548569	-	Protein	3	chrX:10700822	CG1691	RB	exon	1	No		
G00152	CG1691	X:10548569	-	Protein	3	chrX:10700822	CG1691	RC	exon	1	No		
G00152	CG1691	X:10548569	-	Protein	3	chrX:10700822	CG1691	RD	intron	2	Yes		B
G00152	CG1691	X:10548569	-	Protein	3	chrX:10700822	CG1691	RE	intron	2	Yes		B
G00152	CG1691	X:10548569	-	Protein	3	chrX:10700822	CG1691	RF	intron	2	Yes		B
G00152	CG1691	X:10548569	-	Protein	3	chrX:10700822	CG1691	RG	intron	2	Yes		B
G00152	CG1691	X:10548569	-	Protein	3	chrX:10700822	CG1691	RH	intron	3	Yes		B
G00154	CG9216	X:15836025	+	Protein	3	chrX:15999039						B	
G00155	CG17579	2R:7845210	+	Enhancer	3	chr2R:8668001							
G00157	CG15926	X:12202563	+	Protein	4	chrX:12262659						A	
G00171	CG1691	X:10548641	-	Protein	3	chrX:10700894	CG1691	RD	intron	2	Yes		B
G00171	CG1691	X:10548641	-	Protein	3	chrX:10700894	CG1691	RE	intron	2	Yes		B
G00171	CG1691	X:10548641	-	Protein	3	chrX:10700894	CG1691	RF	intron	2	Yes		B
G00171	CG1691	X:10548641	-	Protein	3	chrX:10700894	CG1691	RG	intron	2	Yes		B
G00171	CG1691	X:10548641	-	Protein	3	chrX:10700894	CG1691	RH	intron	3	Yes		B
G00173	unknown	X:6601230	-	Protein	3	chrX:6754887							
G00188	CG2216	3R:26202087	-	Protein	3	chr3R:26212721	CG2216	RA	intron	1	Yes		A
G00188	CG2216	3R:26202087	-	Protein	3	chr3R:26212721	CG2216	RB	intron	2	Yes		A
G00188	CG2216	3R:26202087	-	Protein	3	chr3R:26212721	CG2216	RC	intron	2	Yes		A
G00188	CG2216	3R:26202087	-	Protein	3	chr3R:26212721	CG2216	RD	intron	2	Yes		A
G00188	CG2216	3R:26202087	-	Protein	3	chr3R:26212721	CG2216	RE	intron	2	Yes		A
G00189	unknown	2R:10848564	-	Protein	4	chr2R:11221206						B	
G00199	CG33113	2L:4992857	-	Protein	3	chr2L:5000286	CG33113	RB	intron	3	Yes		A
G00199	CG33113	2L:4992857	-	Protein	3	chr2L:5000286	CG33113	RD	exon	1	No		
G00199	CG33113	2L:4992857	-	Protein	3	chr2L:5000286	CG33113	RE	intron	2	Yes		A
G00199	CG33113	2L:4992857	-	Protein	3	chr2L:5000286	CG33113	RF	intron	1	Yes		A
G00205	CG16858	2L:5016720	-	Protein	3	chr2L:5024149	CG16858	RA	intron	2	Yes		C
G00215	unknown	3L:20540456	+	Protein	3	chr3L:20615018						B	
G00219	CG32498	X:3047299	+	Protein	3	chrX:3182894	CG32498	RB	intron	4	Yes		B
G00219	CG32498	X:3047299	+	Protein	3	chrX:3182894	CG32498	RC	intron	3	Yes		B
G00219	CG32498	X:3047299	+	Protein	3	chrX:3182894	CG32498	RD	intron	3	Yes		B
G00219	CG32498	X:3047299	+	Protein	3	chrX:3182894	CG32498	RI	intron	3	Yes		B
G00219	CG32498	X:3047299	+	Protein	3	chrX:3182894	CG32498	RJ	intron	3	Yes		B
G00219	CG32498	X:3047299	+	Protein	3	chrX:3182894	CG32498	RK	intron	3	Yes		B
G00219	CG32498	X:3047299	+	Protein	3	chrX:3182894	CG32498	RO	intron	4	Yes		B
G00237	CG2216	3R:26202103	-	Protein	3	chr3R:26212737	CG2216	RA	intron	1	Yes		A
G00237	CG2216	3R:26202103	-	Protein	3	chr3R:26212737	CG2216	RB	intron	2	Yes		A
G00237	CG2216	3R:26202103	-	Protein	3	chr3R:26212737	CG2216	RC	intron	2	Yes		A
G00237	CG2216	3R:26202103	-	Protein	3	chr3R:26212737	CG2216	RD	intron	2	Yes		A
G00237	CG2216	3R:26202103	-	Protein	3	chr3R:26212737	CG2216	RE	intron	2	Yes		A
G00246	CG9539	2L:6471602	-	Protein	3	chr2L:6479386	CG9539	RA	intron	2	Yes		C
G00255	CG10109	2R:9545658	+	Protein	3	chr2R:10369437	CG10109	RA	intron	1	Yes		C
G00256	CG6382	2L:12424665	+	Protein	3	chr2L:12435794	CG6382	RA	intron	1	Yes		A
G00258	CG5803	2L:18311965	+	Protein	3	chr2L:18333882	CG5803	RA	intron	1	Yes	A	A
G00258	CG5803	2L:18311965	+	Protein	3	chr2L:18333882	CG5803	RB	intron	1	Yes	A	A
G00258	CG5803	2L:18311965	+	Protein	3	chr2L:18333882	CG5803	RC	intron	1	Yes	A	A
G00258	CG5803	2L:18311965	+	Protein	3	chr2L:18333882	CG5803	RD	intron	1	Yes	A	A
G00259	unknown	2L:16727563	+	Protein	5	2L:16727563						A	
G00261	CG32423	3R:5143381	-	Protein	3	chr3R:5143365	CG8861	RA	intron	2	Yes	C	C
G00262	CG6944	2L:5535205	+	Enhancer	3	chr2L:5542990	CG6944	RA	intron	1	No	B	
G00264	CG10997	X:13552318	-	Protein	3	chrX:13715692	CG10997	RA	intron	1	Yes	C	C
G00273	CG16747	2R:7237105	-	Protein	3	chr2R:8059897	CG16747	RA	intron	1	Yes		B
G00279	CG1640	X:13105068	+	Protein	3	chrX:13268442	CG1640	RA	intron	3	Yes		C
G00279	CG1640	X:13105068	+	Protein	3	chrX:13268442	CG1640	RB	intron	3	Yes		C
G00279	CG1640	X:13105068	+	Protein	3	chrX:13268442	CG1640	RC	intron	3	Yes		C
G00279	CG1640	X:13105068	+	Protein	3	chrX:13268442	CG1640	RD	intron	3	Yes		C
G00279	CG1640	X:13105068	+	Protein	3	chrX:13268442	CG1640	RE	intron	3	Yes		C
G00279	CG1640	X:13105068	+	Protein	3	chrX:13268442	CG1640	RF	intron	3	Yes		C
G00280	CG5499	3R:22682685	+	Protein	3	chr3R:22693320	CG5499	RA	intron	2	Yes	C	C
G00284	CG9042	2L:5937158	-	Protein	3	chr2L:5944943						B	
G00287	CG9819	X:16317779	-	Enhancer	3	chrX:16480792	CG9819	RA	intron	1	No	B	
G00289	CG31605	2L:8096369	+	Protein	4	chr2L:8096369	CG31605	RA	intron	2	Yes	A	A
G00289	CG31605	2L:8096369	+	Protein	4	chr2L:8096369	CG31605	RB	intron	2	Yes	A	A
G00289	CG31605	2L:8096369	+	Protein	4	chr2L:8096369	CG31605	RC	intron	2	Yes	A	A
G00289	CG31605	2L:8096369	+	Protein	4	chr2L:8096369	CG31605	RD	intron	2	Yes	A	A
G00289	CG31605	2L:8096369	+	Protein	4	chr2L:8096369	CG31605	RE	intron	2	Yes	A	A
G00289	CG31605	2L:8096369	+	Protein	4	chr2L:8096369	CG31605	RF	intron	3	Yes	A	A
G00289	CG31605	2L:8096369	+	Protein	4	chr2L:8096369	CG31605	RG	intron	2	Yes	A	A
G00289	CG31605	2L:8096369	+	Protein	4	chr2L:8096369	CG31605	RH	intron	2	Yes	A	A
G00289	CG31605	2L:8096369	+	Protein	4	chr2L:8096369	CG31605	RI	intron	2	Yes	A	A
G00301	CG33113	2L:4997336	-	Protein	3	chr2L:5004765	CG33113	RB	exon	2	No		
G00301	CG33113	2L:4997336	-	Protein	3	chr2L:5004765	CG33113	RE	exon	1	No		
G00301	CG33113	2L:4997336	-	Protein	3	chr2L:5004765	CG33113	RF	intron	1	Yes		A
G00305	CG1634	X:8288364	+	Protein	3	chrX:8443451	CG1634	RA	intron	7	Yes	A	A
G00305	CG1634	X:8288364	+	Protein	3	chrX:8443451	CG1634	RB	intron	7	Yes	A	A
G00305	CG1634	X:8288364	+	Protein	3	chrX:8443451	CG1634	RC	intron	7	Yes	A	A
G00308	CG13109	2L:9168488	-	Protein	3	chr2L:9176257							
G00319	unknown	2R:11892767	-	Protein	3	chr2R:12716547							
G00329	CG18497	2L:161731	-	Protein	3	chr2L:161731							
G00343	CG9553	2L:5970639	+	Protein	3	chr2L:5978424							
G00344le	CG17950	2R:16756893	-	Protein	3	chr2R:17600847							
G00345	CG9936	3L:20943099	-	Enhancer	4	chr3L:21002358	CG9936	RC	intron	3	Yes		A
G00345	CG9936	3L:20943099	-	Enhancer	4	chr3L:21002358	CG9936	RD	intron	3	Yes		A
G00345	CG9936	3L:20943099	-	Enhancer	4	chr3L:21002358	CG9936	RE	intron	3	Yes		A
G00347	CG9936	3L:20943099	-	Enhancer	4	chr3L:21002358	CG9936	RC	intron	3	Yes		A
G00347	CG9936	3L:20943099	-	Enhancer	4	chr3L:21002358	CG9936	RD	intron	3	Yes		A
G00347	CG9936	3L:20943099	-	Enhancer	4	chr3L:21002358	CG9936	RE	intron	3	Yes		A
G00349	CG12702	X:19514548	-	Enhancer	3	chrX:19677621							
G00356	CG5670	3R:16783436	+	Protein	3	chr3R:16783419	CG5670	RA	intron	1	Yes		C
G00356	CG5670	3R:16783436	+	Protein	3	chr3R:16783419	CG5670	RC	intron	1	No		
G00356	CG5670	3R:16783436	+	Protein	3	chr3R:16783419	CG5670	RF	intron	1	No		
G00356	CG5670	3R:16783436	+	Protein	3	chr3R:16783419	CG5670	RG			No		
G00357	CG16785	X:527473	-	Protein	3	chrX:664069						B	
G00360II	CG9047	2R:19925173	-	Protein	3	chr2R:20769126							
G00371	CG6382	2L:12424781	+	Protein	3	chr2L:12435910	CG6382	RA	intron	1	Yes		A
G00378	CG7533	3L:11450072	+	Protein	3	chr3L:11485640	CG7533	RC	intron	1	Yes		A
G00409	CG5461	2L:12482598	-	Protein	3	chr2L:12493727	CG5461	RA	intron	3	Yes	B	B
G00409	CG5461	2L:12482598	-	Protein	3	chr2L:12493727	CG5461	RE	intron	2	Yes	B	B
G00409	CG5461	2L:12482598	-	Protein	3	chr2L:12493727	CG5461	RF	intron	5	Yes	B	B
G00410	CG17950	2R:16757114	-	Protein	3	chr2R:17601068							
G00413	CG31605	2L:8083362	+	Protein	4	chr2L:8083362						A	
G00428	CG2204	2R:5504911	+	Protein	3	chr2R:6331783	CG2204	RB	intron	2	Yes		A
G00428	CG2204	2R:5504911	+	Protein	3	chr2R:6331783	CG2204	RC	intron	2	No		
G00428	CG2204	2R:5504911	+	Protein	3	chr2R:6331783	CG2204	RD	intron	2	Yes		A
G00428	CG2204	2R:5504911	+	Protein	3	chr2R:6331783	CG2204	RE	intron	2	Yes		A
G00428	CG2204	2R:5504911	+	Protein	3	chr2R:6331783	CG2204	RF	intron	2	Yes		A
G00428	CG2204	2R:5504911	+	Protein	3	chr2R:6331783	CG2204	RG	intron	2	Yes		A
G00428	CG2204	2R:5504911	+	Protein	3	chr2R:6331783	CG2204	RH	intron	1	Yes		A
G00434	CG8472	2R:7324709	+	Enhancer	3	chr2R:8147501	CG8472	RA	intron	1	No		
G00440	CG2530	3R:912375	-	Enhancer	3	chr3R:912378	CG2530	RA	exon	1	No		
G00447	CG7850	3R:3932099	-	Enhancer	3	chr3R:3932084							
G00462	CG7850	3R:3932106	-	Enhancer	3	chr3R:3932091							
P00002	CG16901	3R:9470804	-	Protein	3	chr3R:9470785	CG16901	RA	intron	1	Yes		B
P00002	CG16901	3R:9470804	-	Protein	3	chr3R:9470785	CG16901	RB	intron	1	Yes		B
P00002	CG16901	3R:9470804	-	Protein	3	chr3R:9470785	CG16901	RC	intron	1	Yes		B
P00002	CG16901	3R:9470804	-	Protein	3	chr3R:9470785	CG16901	RD	intron	1	No		
P00047	CG9682	3R:26067624	-	Protein	3	chr3R:26078258							
P00695	CG8472	2R:7326413	+	Protein	3	chr2R:8149205	CG8472	RA	intron	2	Yes		C
P01287	unknown	2R:5612595	+	Protein	3	chr2R:6439467							
P01291	unknown	2R:13420112	-	Protein	3	chr2R:14243877							
P01296	CG11414	2R:19605216	+	Enhancer	3	chr2R:20449171	CG11414	RA	exon	1	No		
P01392	CG9042	2L:5936787	+	Protein	3	chr2L:5944572	CG9042	RA	intron	2	Yes		C
P01392	CG9042	2L:5936787	+	Protein	3	chr2L:5944572	CG9042	RB	intron	2	Yes		C
P01392	CG9042	2L:5936787	+	Protein	3	chr2L:5944572	CG9042	RC	intron	2	Yes		C
P01418	unknown	2R:4613463	-	Protein	3	chr2R:5440336							
P01432	CG18405	2L:8535571	+	Enhancer	3	chr2L:8543340	CG18405	RA	exon	1	No		
P01432	CG18405	2L:8535571	+	Enhancer	3	chr2L:8543340	CG18405	RB	exon	1	No		
P01432	CG18405	2L:8535571	+	Enhancer	3	chr2L:8543340	CG18405	RC	exon	1	No		
P01496	unknown	X:9424833	-	Enhancer	3	chrX:9579882							
P01511LE	CG11451	3L:20718692	+	Protein	3	chr3L:20793775	CG11451	RA	intron	1	Yes		B
P01644	unknown	2R:11892776	-	Protein	3	chr2R:12716556							
P01651	CG33261	3L:14706862	-	Enhancer	4	chr3L:14734703							
P01664	CG31694	2L:2865171	-	Protein	3	chr2L:2872602	CG31694	RA	intron	1	Yes		A
P01676	CG31694	2L:2865164	-	Protein	3	chr2L:2872595	CG31694	RA	intron	1	Yes		A
P01679	CG7734	2R:6238501	-	Protein	3	chr2R:7061277							
P01694	CG4889	2L:7299352	-	Protein	3	chr2L:7307121							
P01771	CG2984	X:4426936	+	Protein	3	chrX:4580356							
P01776	CG2621	X:2399772	+	Protein	3	chrX:2537033	CG2621	RA	intron	2	Yes		A
P01776	CG2621	X:2399772	+	Protein	3	chrX:2537033	CG2621	RB	intron	2	Yes		A
P01776	CG2621	X:2399772	+	Protein	3	chrX:2537033	CG2621	RC	intron	2	Yes		A
P01776	CG2621	X:2399772	+	Protein	3	chrX:2537033	CG2621	RE	intron	2	Yes		A
P01776	CG2621	X:2399772	+	Protein	3	chrX:2537033	CG2621	RF	intron	2	Yes		A
P01776	CG2621	X:2399772	+	Protein	3	chrX:2537033	CG2621	RH	intron	2	Yes		A
P01776	CG2621	X:2399772	+	Protein	3	chrX:2537033	CG2621	RI	intron	3	Yes		A
P01776	CG2621	X:2399772	+	Protein	3	chrX:2537033	CG2621	RJ	intron	4	Yes		A
P01793	CG8427	2R:7233957	+	Protein	3	chr2R:8056749	CG8427	RA	intron	1	Yes		A
P01810	CG7893	X:18992777	+	Enhancer	3	chrX:19155850							
P01849	CG18426	2R:18894655	-	Enhancer	3	chr2R:19738610	CG18426	RA	exon	1	No		
P01855	CG30011	2R:5185858	+	Enhancer	3	chr2R:6012730							
P01869	CG8815	2R:7658317	-	Enhancer	3	chr2R:8481109							
P01884	CG17950	2R:16757166	+	Enhancer	3	chr2R:17601120	CG17950	RA	intron	1	No		
P01884	CG17950	2R:16757166	+	Enhancer	3	chr2R:17601120	CG17950	RB	intron	1	No		
P01887	CG4889	2L:7299353	-	Enhancer	3	chr2L:7307122							
P01902	CG9847	2R:16532374	-	Protein	3	chr2R:17376328	CG9847	RA	intron	2	Yes		B
P01902	CG9847	2R:16532374	-	Protein	3	chr2R:17376328	CG9847	RB	intron	2	Yes		B
P01907	CG4068	X:4676805	-	Enhancer	3	chrX:4830224	CG4068	RC	intron	1	No		
P01914	CG10377	2L:6912942	-	Enhancer	3	chr2L:6920711							
P01967	CG4379	2L:9691526	-	Enhancer	3	chr2L:9699297							
P01986	CG3758	2L:15311974	+	Enhancer	3	chr2L:15333889	CG3758	RA	exon	1	No		
P01989	CG1772	2R:4772908	+	Enhancer	3	chr2R:5599780							
P01996	CG18426	2R:18894655	-	Enhancer	3	chr2R:19738610	CG18426	RA	exon	1	No		
P01999	CG4590	X:6738950	+	Enhancer	3	chrX:6892607							
P02006	CG6061	2R:8572289	+	Protein	3	chr2R:9395080	CG6050	RA	exon	1	No		
P02006	CG6061	2R:8572289	+	Protein	3	chr2R:9395080	CG6061	RA	intron	1	Yes		A
P02008	CG9075	2L:5974720	+	Protein	3	chr2L:5982505	CG9075	RA	intron	1	Yes		B
P02008	CG9075	2L:5974720	+	Protein	3	chr2L:5982505	CG9075	RC	intron	1	Yes		B
P02019	CG12052	2R:5602311	+	Protein	3	chr2R:6429183							
P02025	CG14442	X:6435278	-	Enhancer	3	chrX:6588935	CG14442	RA	exon	1	No		
P02029	CG7958	3L:10815400	-	Enhancer	4	chr3L:10834553							
P02046	CG9075	2L:5974712	+	Protein	3	chr2L:5982497	CG9075	RA	intron	1	Yes		B
P02046	CG9075	2L:5974712	+	Protein	3	chr2L:5982497	CG9075	RC	intron	1	Yes		B
P02065	CG5575	2R:18913859	-	Protein	3	chr2R:19757814							
P02079	CG3644	2R:7934936	+	Enhancer	3	chr2R:8757727							
YB0007	CG4059	3L:18720598	-	Protein	3	chr3L:18764819	CG4059	RB	intron	1	Yes	B	A
YB0009	CG9429	3R:5456529	+	Protein	3	chr3R:5456513						B	
YB0010	CG33175	X:10287097	+	Protein	3	chrX:10440870						B	
YB0011	CG9745	3R:5065754	-	Protein	3	chr3R:5065738	CG9745	RA	exon	2	No	B	
YB0011	CG9745	3R:5065754	-	Protein	3	chr3R:5065738	CG9745	RB	intron	2	No	B	
YB0011	CG9745	3R:5065754	-	Protein	3	chr3R:5065738	CG9745	RC	exon	2	No	B	
YB0012	CG5605	3L:20268122	+	Protein	3	chr3L:20342684	CG5605	RA	intron	1	Yes	B	B
YB0012	CG5605	3L:20268122	+	Protein	3	chr3L:20342684	CG5605	RB	intron	2	Yes	B	B
YB0012	CG5605	3L:20268122	+	Protein	3	chr3L:20342684	CG5605	RC	intron	2	Yes	B	B
YB0012	CG5605	3L:20268122	+	Protein	3	chr3L:20342684	CG5605	RE	intron	2	Yes	B	B
YB0012	CG5605	3L:20268122	+	Protein	3	chr3L:20342684	CG5605	RF	intron	2	Yes	B	B
YB0012	CG5605	3L:20268122	+	Protein	3	chr3L:20342684	CG5605	RG	intron	2	Yes	B	B
YB0013	CG1765	2R:1259474	+	Protein	3	chr2R:2008111						B	
YB0014	CG4609	3L:16360549	+	Protein	3	chr3L:16404770						B	
YB0016	CG7004	3L:300347	+	Protein	3	chr3L:319717						B	
YB0018	CG4590	X:6738926	+	Enhancer	3	chrX:6892583						B	
YB0023LE	CG3836	3L:14358523	+	Enhancer	3	chr3L:14402743						B	
YB0024DE	CG5575	2R:18915681	-	Enhancer	3	chr2R:19759636						B	
YB0024LE	CG2865	X:2040457	+	Enhancer	3	chrX:2177718						B	
YB0025	CG18228	3R:4087405	-	Enhancer	3	chr3R:4087390						B	
YB0026	CG10772	3R:21288149	-	Enhancer	3	chr3R:21298784						B	
YB0027	unknown	3L:1567295	-	Enhancer	3	chr3L:1586666						B	
YB0031	CG4590	X:6738950	+	Enhancer	3	chrX:6892607						B	
YB0032	unknown	2R:13420968	-	Enhancer	3	chr2R:14244733						B	
YB0034	CG8395	2R:11078556	+	Enhancer	3	chr2R:11902336						B	
YB0035	CG6889	3R:12075657	+	Protein	3	chr3R:12075639	CG6889	RA	intron	1	Yes	B	C
YB0035	CG6889	3R:12075657	+	Protein	3	chr3R:12075639	CG6889	RB	intron	1	Yes	B	C
YB0036	unknown	X:6608660	-	Protein	3	chrX:6762317						B	
YB0036LE	CG32134	3L:14025872	+	Enhancer	3	chr3L:14070092	CG32134	RA	intron	2	No	B	
YB0037	CG4379	2L:9691454	-	Enhancer	3	chr2L:9699225	CG4379	RA	exon	1	No	B	
YB0037	CG4379	2L:9691454	-	Enhancer	3	chr2L:9699225	CG4379	RB	exon	1	No	B	
YB0037	CG4379	2L:9691454	-	Enhancer	3	chr2L:9699225	CG4379	RC	exon	1	No	B	
YB0038	CG8732	2R:3728530	-	Enhancer	3	chr2R:4555288						B	
YB0039	CG2207	2L:21461367	-	Protein	3	chr2L:21628246	CG2207	RA	intron	1	Yes	B	B
YB0039	CG2207	2L:21461367	-	Protein	3	chr2L:21628246	CG2207	RB	intron	2	Yes	B	B
YB0039	CG2207	2L:21461367	-	Protein	3	chr2L:21628246	CG2207	RF	intron	1	Yes	B	B
YB0040	CG1007	3L:729936	+	Enhancer	3	chr3L:749307						B	
YB0041	CG12212	X:4358199	+	Enhancer	3	chrX:4511616	CG12212	RA	exon	1	No	B	
YB0041	CG12212	X:4358199	+	Enhancer	3	chrX:4511616	CG12212	RB	exon	1	No	B	
YB0046	CG1691	X:10548664	-	Protein	3	chrX:10700917	CG1691	RD	intron	2	Yes	B	B
YB0046	CG1691	X:10548664	-	Protein	3	chrX:10700917	CG1691	RE	intron	2	Yes	B	B
YB0046	CG1691	X:10548664	-	Protein	3	chrX:10700917	CG1691	RF	intron	2	Yes	B	B
YB0046	CG1691	X:10548664	-	Protein	3	chrX:10700917	CG1691	RG	intron	2	Yes	B	B
YB0046	CG1691	X:10548664	-	Protein	3	chrX:10700917	CG1691	RH	intron	3	Yes	B	B
YB0052LE	CG10279	3R:1834156	-	Protein	3	chr3R:1834159	CG10279	RA	exon	1	Yes	B	
YB0052LE	CG10279	3R:1834156	-	Protein	3	chr3R:1834159	CG10279	RB	exon	1	No	B	
YB0052LE	CG10279	3R:1834156	-	Protein	3	chr3R:1834159	CG10279	RC	intron	1	No	B	
YB0052LE	CG10279	3R:1834156	-	Protein	3	chr3R:1834159	CG10279	RD	intron	1	No	B	
YB0057DE	CG10155	2R:9832868	+	Protein	3	chr2R:10656647						B	
YB0057LE	CG1691	X:10550633	-	Protein	3	chrX:10702886	CG1691	RD	intron	2	Yes	B	B
YB0057LE	CG1691	X:10550633	-	Protein	3	chrX:10702886	CG1691	RE	intron	2	Yes	B	B
YB0057LE	CG1691	X:10550633	-	Protein	3	chrX:10702886	CG1691	RF	intron	2	Yes	B	B
YB0057LE	CG1691	X:10550633	-	Protein	3	chrX:10702886	CG1691	RG	intron	2	Yes	B	B
YB0057LE	CG1691	X:10550633	-	Protein	3	chrX:10702886	CG1691	RH	intron	3	Yes	B	B
YB0058	CG8815	2R:7658356	-	Enhancer	3	chr2R:8481148						B	
YB0060	CG16901	3R:9471569	-	Protein	3	chr3R:9471550	CG16901	RA	exon	1	Yes	B	
YB0060	CG16901	3R:9471569	-	Protein	3	chr3R:9471550	CG16901	RB	exon	1	Yes	B	
YB0060	CG16901	3R:9471569	-	Protein	3	chr3R:9471550	CG16901	RC	exon	1	Yes	B	
YB0060	CG16901	3R:9471569	-	Protein	3	chr3R:9471550	CG16901	RD	exon	1	No	B	
YB0063	CG5185	3L:14918233	+	Enhancer	3	chr3L:14962454	CG5185	RA	exon	1	No	B	
YB0065DE	CG18497	2L:159630	-	Enhancer	3	chr2L:159630						B	
YB0065LE	CG33201	3R:1447978	+	Enhancer	3	chr3R:1447981						B	
YB0066	CG10383	2L:18672326	-	Protein	3	chr2L:18694243	CG10383	RA	intron	1	Yes	B	B
YB0067	CG1007	3L:729964	+	Enhancer	3	chr3L:749335						B	
YB0069	CG4070	X:12390830	-	Enhancer	3	chrX:12554203						B	
YB0070	CG5061	2L:1159615	+	Enhancer	3	chr2L:1157949						B	
YB0076	CG9553	2L:5972699	+	Enhancer	3	chr2L:5980484						B	
YB0077	CG10279	3R:1833556	-	Protein	3	chr3R:1833559	CG10279	RA	intron	1	Yes	B	B
YB0077	CG10279	3R:1833556	-	Protein	3	chr3R:1833559	CG10279	RB	intron	1	No	B	
YB0077	CG10279	3R:1833556	-	Protein	3	chr3R:1833559	CG10279	RC	intron	2	No	B	
YB0077	CG10279	3R:1833556	-	Protein	3	chr3R:1833559	CG10279	RD	intron	2	Yes	B	B
YB0077	CG10279	3R:1833556	-	Protein	3	chr3R:1833559	CG10279	RE	intron	1	No	B	
YB0084	CG5953	2L:16511138	-	Enhancer	3	chr2L:16533054						B	
YB0086DE	CG13897	3L:719373	+	Enhancer	3	chr3L:738744						B	
YB0105	CG9553	2L:5972196	+	Enhancer	3	chr2L:5979981						B	
YB0108	CG31522	3R:279005	+	Enhancer	3	chr3R:279006						B	
YB0109	CG14478	2R:12521450	-	Enhancer	3	chr2R:13345230						B	
YB0111	CG2530	3R:912464	-	Enhancer	3	chr3R:912467						B	
YB0112	CG4599	2L:16470708	+	Protein	3	chr2L:16492624	CG4599	RA	intron	1	Yes	B	B
YB0115	CG7201	3L:8249829	-	Protein	3	chr3L:8284219	CG7201	RA	exon	3	Yes	B	
YB0118	CG12052	2R:5602376	+	Protein	3	chr2R:6429248						B	
YB0120DE	CG17618	3R:18543948	+	Protein	3	chr3R:18553292	CG17618	RB	intron	1	Yes	B	B
YB0120DE	CG17618	3R:18543948	+	Protein	3	chr3R:18553292	CG6982	RB	intron	1	No	B	
YB0120DE	CG17618	3R:18543948	+	Protein	3	chr3R:18553292	CG6982	RC	intron	1	No	B	
YB0125	CG9071	2R:19947480	-	Protein	3	chr2R:20791433	CG30425	RA	exon	1	No	B	
YB0130	CG10627	3L:12487671	+	Protein	3	chr3L:12523224						B	
YB0133	unknown	3L:14941145	-	Protein	3	chr3L:14985366						B	
YB0135	CG11940	X:19582163	+	Protein	3	chrX:19745236						B	
YB0141	CG3619	3R:15151976	-	Enhancer	3	chr3R:15151959						B	
YB0142	CG5889	3R:22967964	+	Protein	3	chr3R:22978599	CG5889	RA	intron	1	Yes	B	B
YB0144	CG7331	3R:4175583	+	Enhancer	3	chr3R:4175568	CG7331	RA	exon	1	No	B	
YB0146	CG8036	3R:4496720	+	Protein	3	chr3R:4496705	CG8036	RB	intron	2	Yes	B	B
YB0146	CG8036	3R:4496720	+	Protein	3	chr3R:4496705	CG8036	RC	intron	1	Yes	B	B
YB0146	CG8036	3R:4496720	+	Protein	3	chr3R:4496705	CG8036	RD	intron	1	No	B	
YB0148	CG13109	2L:9168706	-	Protein	3	chr2L:9176475						B	
YB0151	CG10652	2L:18987288	-	Protein?	3	chr2L:19009205	CG10652	RB	exon	1	No	B	
YB0152	CG8624	3L:7093579	-	Protein?	3	chr3L:7127150						B	
YB0155	unknown	2R:4613534	-	Protein?	3	chr2R:5440407						B	
YB0159LE	CG1395	3R:25070411	+	Protein?	3	chr3R:25081045						B	
YB0162	CG4070	X:12390878	-	Protein?	3	chrX:12554251						B	
YB0164	CG2977	X:6738952	-	Protein	3	chrX:6892609	CG2977	RB	intron	3	Yes	B	C
YB0168	CG6143	3L:17593817	-	Enhancer	3	chr3L:17638038	CG6143	RA	exon	1	No	B	
YB0168	CG6143	3L:17593817	-	Enhancer	3	chr3L:17638038	CG6143	RB	exon	1	No	B	
YB0168	CG6143	3L:17593817	-	Enhancer	3	chr3L:17638038	CG6143	RC	exon	1	No	B	
YB0169	CG5641	3R:8254987	-	Enhancer	3	chr3R:8254968	CG5641	RA	exon	1	No	B	
YB0172	CG6889	3R:12076055	-	Enhancer	3	chr3R:12076037						B	
YB0175	CG8624	3L:7094064	-	Enhancer	3	chr3L:7127635						B	
YB0181	CG30023	2R:6462144	-	Enhancer	4	chr2R:6833742						B	
YB0185	CG11654	X:15181280	+	Enhancer	3	chrX:15344299	CG11654	RA	exon	1	No	B	
YB0188	CG2096	X:10125925	+	Enhancer	3	chrX:10280050	CG2096	RA	exon	1	No	B	
YB0188	CG2096	X:10125925	+	Enhancer	3	chrX:10280050	CG2096	RB	exon	1	No	B	
YB0193	CG10777	X:7669990	+	Enhancer	3	chrX:7825077						B	
YB0197	CG3525	X:16009352	+	Enhancer	3	chrX:16172366	CG3525	RA	exon	1	No	B	
YB0197	CG3525	X:16009352	+	Enhancer	3	chrX:16172366	CG3525	RB	exon	1	No	B	
YB0197	CG3525	X:16009352	+	Enhancer	3	chrX:16172366	CG3525	RE	exon	1	No	B	
YB0205	unknown	2R:5185217	-	Enhancer	3	chr2R:6012089						B	
YB0207D	CG2977	X:6738955	-	Protein	3	chrX:6892612	CG2977	RB	intron	3	Yes	B	C
YB0207L	CG14938	2L:11795984	-	Enhancer	3	chr2L:11807113	CG14938	RA	intron	1	No	B	
YB0207L	CG14938	2L:11795984	-	Enhancer	3	chr2L:11807113	CG14938	RB	intron	1	No	B	
YB0207L	CG14938	2L:11795984	-	Enhancer	3	chr2L:11807113	CG14938	RC	intron	1	No	B	
YB0207L	CG14938	2L:11795984	-	Enhancer	3	chr2L:11807113	CG14938	RD	intron	1	No	B	
YB0215	CG7536	X:17815828	+	Enhancer	3	chrX:17978902						B	
YB0216LE	CG6450	X:3705583	-	Enhancer	3	chrX:3859000						B	
YB0217	CG1007	3L:730006	+	Enhancer	3	chr3L:749377						B	
YB0218	CG4798	2R:12485090	+	Protein	4	chr2R:12857732						B	
YB0219	CG33691	X:6608810	+	Enhancer	4	chrX:6657607	CG14438	RA	exon	4	Yes	B	
YB0219	CG33691	X:6608810	+	Enhancer	4	chrX:6657607	CG14438	RB	exon	4	Yes	B	
YB0229	CG10377	2L:6913200	-	Enhancer	3	chr2L:6920969						B	
YB0230D	CG10641	2L:18965378	-	Enhancer	3	chr2L:18987295						B	
YB0232	CG3758	2L:15311991	+	Enhancer	3	chr2L:15333906	CG3758	RA	exon	1	No	B	
YB0239	CG11280	3L:13071832	+	Enhancer	3	chr3L:13107385	CG11280	RA	exon	1	No	B	
YB0242	CG14233	X:19443881	-	Enhancer	3	chrX:19606954	CG14233	RA	intron	1	No	B	
YB0246	CG5575	2R:18914130	-	Enhancer	3	chr2R:19758085						B	
YB0248	CG5201	3R:12879948	-	Enhancer	3	chr3R:12879933						B	
YB0256	CG10279	3R:1833385	-	Protein	3	chr3R:1833388	CG10279	RA	intron	1	Yes	B	B
YB0256	CG10279	3R:1833385	-	Protein	3	chr3R:1833388	CG10279	RB	intron	1	No	B	
YB0256	CG10279	3R:1833385	-	Protein	3	chr3R:1833388	CG10279	RC	intron	2	No	B	
YB0256	CG10279	3R:1833385	-	Protein	3	chr3R:1833388	CG10279	RD	intron	2	Yes	B	B
YB0256	CG10279	3R:1833385	-	Protein	3	chr3R:1833388	CG10279	RE	intron	1	No	B	
YB0256	CG10279	3R:1833385	-	Protein	3	chr3R:1833388	CG10279	RF	exon	1	No	B	
YB0257	CG6874	3L:18770072	+	Enhancer	3	chr3L:18814293	CG6874	RA	exon	1	No	B	
YB0271	CG5605	3L:20268073	+	Protein	3	chr3L:20342635	CG5605	RA	intron	1	Yes	B	B
YB0271	CG5605	3L:20268073	+	Protein	3	chr3L:20342635	CG5605	RB	intron	2	Yes	B	B
YB0271	CG5605	3L:20268073	+	Protein	3	chr3L:20342635	CG5605	RC	intron	2	Yes	B	B
YB0271	CG5605	3L:20268073	+	Protein	3	chr3L:20342635	CG5605	RE	intron	2	Yes	B	B
YB0271	CG5605	3L:20268073	+	Protein	3	chr3L:20342635	CG5605	RF	intron	2	Yes	B	B
YB0271	CG5605	3L:20268073	+	Protein	3	chr3L:20342635	CG5605	RG	intron	2	Yes	B	B
YB0272	CG3000	X:4420115	-	Enhancer	3	chrX:4573535	CG3000	RA	exon	1	No	B	
YB0295	CG31363	3R:7445629	-	Enhancer	3	chr3R:7445611	CG31363	RA	exon	1	No	B	
YB0295	CG31363	3R:7445629	-	Enhancer	3	chr3R:7445611	CG31363	RD	exon	1	No	B	
YB0295	CG31363	3R:7445629	-	Enhancer	3	chr3R:7445611	CG31363	RH	exon	1	No	B	
YB0297	CG10272	3R:2232820	+	Enhancer	3	chr3R:2232820	CG10272	RA	intron	1	No	B	
YB0297	CG10272	3R:2232820	+	Enhancer	3	chr3R:2232820	CG10272	RB	exon	1	No	B	
YB0298	CG6603	3L:13987078	+	Protein	3	chr3L:14031298	CG6603	RA	intron	2	Yes	B	B
YB0298	CG6603	3L:13987078	+	Protein	3	chr3L:14031298	CG6603	RB	intron	2	Yes	B	B
YB0298	CG6603	3L:13987078	+	Protein	3	chr3L:14031298	CG6603	RC	intron	1	Yes	B	B
YB0300	CG10777	X:7670316	-	Enhancer	3	chrX:7825403						B	
YB0301	CG2922	3R:1426302	+	Enhancer	3	chr3R:1426305						B	
YB0309	CG31522	3R:278955	-	Enhancer	3	chr3R:278956	CG31522	RB	exon	1	No	B	
YB0309	CG31522	3R:278955	-	Enhancer	3	chr3R:278956	CG31522	RC	exon	1	No	B	
YB0311	unknown	3R:17122250	+	Enhancer	4	chr3R:17122250						B	
YB0314	CG6782	3R:7392521	+	Enhancer	4	chr3R:7392521						B	
YB0315	CG9821	3R:4646430	+	Enhancer	3	chr3R:4646415						B	
YB0338	CG32031	3L:9016298	-	Protein	3	chr3L:9050688	CG32031	RA	intron	3	Yes	B	B
YB0338	CG32031	3L:9016298	-	Protein	3	chr3L:9050688	CG32031	RB	intron	2	Yes	B	B
YB0338	CG32031	3L:9016298	-	Protein	3	chr3L:9050688	CG32031	RE	intron	2	Yes	B	B
YB0359	CG9553	2L:5972415	+	Protein	3	chr2L:5980200						B	
YB0360DE	CG11371	2L:66953	-	Protein	4	chr2L:66953						B	
YB0370LE	CG5735	3L:8911966	-	Enhancer	3	chr3L:8946356	CG5735	RB	intron	1	No	B	
YB0370LE	CG5735	3L:8911966	-	Enhancer	3	chr3L:8946356	CG5735	RD	intron	2	No	B	
YB0377	CG5164	2R:13462086	+	Enhancer	3	chr2R:14285871						B	
YB0378	CG4070	X:12397158	-	Enhancer	3	chrX:12560531						B	
YC0001	CG4035	3L:9359500	-	Protein	3	chr3L:9395071	CG4035	RA	intron	1	No	C	
YC0001	CG4035	3L:9359500	-	Protein	3	chr3L:9395071	CG4035	RB	intron	1	No	C	
YC0001	CG4035	3L:9359500	-	Protein	3	chr3L:9395071	CG4035	RC	intron	1	Yes	C	C
YC0001	CG4035	3L:9359500	-	Protein	3	chr3L:9395071	CG4035	RD	intron	1	No	C	
YC0001	CG4035	3L:9359500	-	Protein	3	chr3L:9395071	CG4035	RE	exon	1	No	C	
YC0001	CG4035	3L:9359500	-	Protein	3	chr3L:9395071	CG4035	RG	intron	1	No	C	
YC0004	CG8938	2R:12161516	-	Enhancer	3	chr2R:12985296						C	
YC0005	CG1725	X:11133349	+	Protein	3	chrX:11285443	CG1725	RA	intron	1	Yes	C	C
YC0005	CG1725	X:11133349	+	Protein	3	chrX:11285443	CG1725	RB	intron	6	Yes	C	C
YC0005	CG1725	X:11133349	+	Protein	3	chrX:11285443	CG1725	RD	intron	2	Yes	C	C
YC0005	CG1725	X:11133349	+	Protein	3	chrX:11285443	CG1725	RE	intron	2	Yes	C	C
YC0005	CG1725	X:11133349	+	Protein	3	chrX:11285443	CG1725	RF	intron	5	Yes	C	C
YC0005	CG1725	X:11133349	+	Protein	3	chrX:11285443	CG1725	RG	intron	2	Yes	C	C
YC0005	CG1725	X:11133349	+	Protein	3	chrX:11285443	CG1725	RH	intron	5	Yes	C	C
YC0005	CG1725	X:11133349	+	Protein	3	chrX:11285443	CG1725	RK	intron	2	Yes	C	C
YC0005	CG1725	X:11133349	+	Protein	3	chrX:11285443	CG1725	RL	intron	5	Yes	C	C
YC0014	CG14066	3R:24141415	-	Protein	3	chr3R:24152049	CG14066	RB	intron	1	No	C	
YC0014	CG14066	3R:24141415	-	Protein	3	chr3R:24152049	CG14066	RC	intron	1	No	C	
YC0015	CG9983	3R:24415528	+	Protein	3	chr3R:24426162	CG9983	RA	intron	1	Yes	C	C
YC0015	CG9983	3R:24415528	+	Protein	3	chr3R:24426162	CG9983	RB	exon	1	No	C	
YC0015	CG9983	3R:24415528	+	Protein	3	chr3R:24426162	CG9983	RC	exon	1	No	C	
YC0015	CG9983	3R:24415528	+	Protein	3	chr3R:24426162	CG9983	RD	exon	1	No	C	
YC0015	CG9983	3R:24415528	+	Protein	3	chr3R:24426162	CG9983	RE	intron	1	Yes	C	C
YC0015	CG9983	3R:24415528	+	Protein	3	chr3R:24426162	CG9983	RF	exon	1	No	C	
YC0017	CG3979	3L:18790130	-	Protein	3	chr3L:18834351	CG3979	RB	intron	1	Yes	C	C
YC0017	CG3979	3L:18790130	-	Protein	3	chr3L:18834351	CG3979	RC	exon	1	No	C	
YC0019	CG1539	3R:26378749	+	Protein	3	chr3R:26389383	CG1539	RA	intron	1	Yes	C	C
YC0019	CG1539	3R:26378749	+	Protein	3	chr3R:26389383	CG1539	RC	intron	2	Yes	C	C
YC0019	CG1539	3R:26378749	+	Protein	3	chr3R:26389383	CG1539	RD	intron	1	Yes	C	C
YC0019	CG1539	3R:26378749	+	Protein	3	chr3R:26389383	CG1539	RE	intron	2	Yes	C	C
YC0019	CG1539	3R:26378749	+	Protein	3	chr3R:26389383	CG1539	RF	intron	2	Yes	C	C
YC0019	CG1539	3R:26378749	+	Protein	3	chr3R:26389383	CG1539	RG	intron	2	Yes	C	C
YC0022	CG9894	2L:2746311	+	Protein	3	chr2L:2753742	CG9894	RA	intron	1	Yes	C	C
YC0022	CG9894	2L:2746311	+	Protein	3	chr2L:2753742	CG9894	RB	intron	2	Yes	C	C
YC0023	CG9218	2R:14680261	-	Protein	3	chr2R:15504046	CG9218	RA	intron	2	Yes	C	C
YC0023	CG9218	2R:14680261	-	Protein	3	chr2R:15504046	CG9218	RC	intron	2	Yes	C	C
YC0023	CG9218	2R:14680261	-	Protein	3	chr2R:15504046	CG9218	RE	intron	2	Yes	C	C
YC0023	CG9218	2R:14680261	-	Protein	3	chr2R:15504046	CG9218	RF	intron	2	Yes	C	C
YC0025	CG33343	3R:20402997	+	Enhancer	3	chr3R:20412340	CG34100	RA	intron	1	No	C	
YC0027	CG9042	2L:5936953	+	Protein	3	chr2L:5944738	CG9042	RA	intron	2	Yes	C	C
YC0027	CG9042	2L:5936953	+	Protein	3	chr2L:5944738	CG9042	RB	intron	2	Yes	C	C
YC0027	CG9042	2L:5936953	+	Protein	3	chr2L:5944738	CG9042	RC	intron	2	Yes	C	C
YC0030	CG3979	3L:18789416	-	Protein	3	chr3L:18833637	CG3979	RB	intron	1	Yes	C	C
YC0030	CG3979	3L:18789416	-	Protein	3	chr3L:18833637	CG3979	RC	intron	1	No	C	
YC0031	CG5670	3R:16782932	+	Protein	3	chr3R:16782915	CG5670	RA	intron	1	Yes	C	C
YC0031	CG5670	3R:16782932	+	Protein	3	chr3R:16782915	CG5670	RC	intron	1	No	C	
YC0031	CG5670	3R:16782932	+	Protein	3	chr3R:16782915	CG5670	RF	intron	1	No	C	
YC0031	CG5670	3R:16782932	+	Protein	3	chr3R:16782915	CG5670	RG			No	C	
YC0032	CG8582	3L:7328099	-	Protein	3	chr3L:7361670	CG8582	RA	intron	2	Yes	C	C
YC0032	CG8582	3L:7328099	-	Protein	3	chr3L:7361670	CG8582	RB	intron	1	Yes	C	C
YC0034	CG8582	3L:7328359	-	Protein	3	chr3L:7361930	CG8582	RA	intron	2	Yes	C	C
YC0034	CG8582	3L:7328359	-	Protein	3	chr3L:7361930	CG8582	RB	intron	1	Yes	C	C
YC0036	CG4609	3L:16359348	-	Protein	3	chr3L:16403569	CG4609	RA	intron	1	Yes	C	C
YC0036	CG4609	3L:16359348	-	Protein	3	chr3L:16403569	CG4609	RC	intron	1	Yes	C	C
YC0038	CG9748	3R:4485601	-	Protein	3	chr3R:4485586	CG9748	RA	intron	1	Yes	C	C
YC0043	CG3979	3L:18789550	-	Protein	3	chr3L:18833771	CG3979	RB	intron	1	Yes	C	C
YC0043	CG3979	3L:18789550	-	Protein	3	chr3L:18833771	CG3979	RC	intron	1	No	C	
YC0045LE	CG10033	2L:3625706	-	Protein	3	chr2L:3633137	CG10033	RA	intron	4	Yes	C	A
YC0045LE	CG10033	2L:3625706	-	Protein	3	chr2L:3633137	CG10033	RB	intron	2	Yes	C	A
YC0045LE	CG10033	2L:3625706	-	Protein	3	chr2L:3633137	CG10033	RH	intron	3	Yes	C	A
YC0045LE	CG10033	2L:3625706	-	Protein	3	chr2L:3633137	CG10033	RI	intron	4	Yes	C	A
YC0051	CG14066	3R:24146164	-	Protein?	3	chr3R:24156798						C	
YC0053	CG1800	3R:27433102	+	Enhancer	3	chr3R:27443736	CG1800	RA	exon	1	No	C	
YC0054LE	CG7231	2L:7977849	-	Enhancer	3	chr2L:7985618						C	
YC0055	CG14066	3R:24141441	-	Protein?	3	chr3R:24152075	CG14066	RB	intron	1	No	C	
YC0055	CG14066	3R:24141441	-	Protein?	3	chr3R:24152075	CG14066	RC	intron	1	No	C	
YC0058	CG12163	3R:1076884	-	Protein	3	chr3R:1076887	CG12163	RA	intron	1	Yes	C	C
YC0058	CG12163	3R:1076884	-	Protein	3	chr3R:1076887	CG12163	RB	intron	1	Yes	C	C
YC0059	CG3849	3L:16648909	-	Protein	4	chr3L:16676750	CG3849	RA	intron	2	Yes	C	B
YC0059	CG3849	3L:16648909	-	Protein	4	chr3L:16676750	CG3849	RB	intron	2	Yes	C	B
YC0061	CG12972	3L:21264454	-	Protein?	3	chr3L:21340278						C	
YC0063	CG9277	2R:14513859	-	Protein	3	chr2R:15337644	CG9277	RB	intron	1	Yes	C	C
YC0063	CG9277	2R:14513859	-	Protein	3	chr2R:15337644	CG9277	RC	intron	1	No	C	
YC0063	CG9277	2R:14513859	-	Protein	3	chr2R:15337644	CG9277	RD	intron	1	No	C	
YC0064DE	CG31349	3R:4683454	+	Protein	3	chr3R:4683439						C	
YC0064LE	CG8095	2R:10317355	-	Protein	3	chr2R:11141135						C	
YC0066	CG17161	2L:16661804	-	Protein	3	chr2L:16683720						C	
YC0069DE	CG7986	3L:8145680	+	Protein?	3	chr3L:8180070						C	
YC0069LE	CG8472	2R:7326383	+	Protein	3	chr2R:8149175	CG8472	RA	intron	2	Yes	C	C
YC0071	CG4898	3R:11116639	+	Protein	3	chr3R:11116621	CG4898	RB	intron	3	Yes	C	C
YC0071	CG4898	3R:11116639	+	Protein	3	chr3R:11116621	CG4898	RC	intron	1	Yes	C	C
YC0071	CG4898	3R:11116639	+	Protein	3	chr3R:11116621	CG4898	RD	intron	3	Yes	C	C
YC0071	CG4898	3R:11116639	+	Protein	3	chr3R:11116621	CG4898	RE	intron	5	Yes	C	C
YC0071	CG4898	3R:11116639	+	Protein	3	chr3R:11116621	CG4898	RF	intron	3	Yes	C	C
YC0071	CG4898	3R:11116639	+	Protein	3	chr3R:11116621	CG4898	RG	intron	3	Yes	C	C
YC0071	CG4898	3R:11116639	+	Protein	3	chr3R:11116621	CG4898	RH	intron	3	Yes	C	C
YC0071	CG4898	3R:11116639	+	Protein	3	chr3R:11116621	CG4898	RI	intron	2	Yes	C	C
YC0071	CG4898	3R:11116639	+	Protein	3	chr3R:11116621	CG4898	RJ	intron	3	Yes	C	C
YC0071	CG4898	3R:11116639	+	Protein	3	chr3R:11116621	CG4898	RK	intron	3	Yes	C	C
YC0071	CG4898	3R:11116639	+	Protein	3	chr3R:11116621	CG4898	RL	intron	3	Yes	C	C
YC0073	CG31475	3R:15006370	+	Enhancer	3	chr3R:15006353						C	
YC0075	CG8542	2R:9319818	+	Enhancer	3	chr2R:10143597						C	
YC0079	CG9047	2R:19925170	+	Enhancer	3	chr2R:20769123	CG34413	RB	exon	1	No	C	
YC0079	CG9047	2R:19925170	+	Enhancer	3	chr2R:20769123	CG34413	RC	exon	1	No	C	
YC0079	CG9047	2R:19925170	+	Enhancer	3	chr2R:20769123	CG34413	RD	exon	1	No	C	
YC0079	CG9047	2R:19925170	+	Enhancer	3	chr2R:20769123	CG34413	RE	exon	1	No	C	
YC0083DE	CG8339	3L:6455367	+	Enhancer	3	chr3L:6488938	CG8339	RA	exon	1	No	C	
YC0084	CG12846	2R:2072192	-	Protein	3	chr2R:2898795	CG12846	RA	intron	1	Yes	C	C
YC0086	CG9894	2L:2746834	+	Protein	3	chr2L:2754265	CG9894	RA	intron	1	Yes	C	C
YC0086	CG9894	2L:2746834	+	Protein	3	chr2L:2754265	CG9894	RB	intron	2	Yes	C	C
YC0089	CG11357	3L:4520049	-	Protein	3	chr3L:4542108						C	
YC0091	unknown	2L:7568860	+	Protein	3	chr2L:7576629						C	
YC0096	CG4898	3R:11117688	+	Protein	3	chr3R:11117670	CG4898	RA	intron	1	Yes	C	C
YC0096	CG4898	3R:11117688	+	Protein	3	chr3R:11117670	CG4898	RB	intron	4	Yes	C	C
YC0096	CG4898	3R:11117688	+	Protein	3	chr3R:11117670	CG4898	RC	intron	1	Yes	C	C
YC0096	CG4898	3R:11117688	+	Protein	3	chr3R:11117670	CG4898	RD	intron	3	Yes	C	C
YC0096	CG4898	3R:11117688	+	Protein	3	chr3R:11117670	CG4898	RE	intron	5	Yes	C	C
YC0096	CG4898	3R:11117688	+	Protein	3	chr3R:11117670	CG4898	RF	intron	3	Yes	C	C
YC0096	CG4898	3R:11117688	+	Protein	3	chr3R:11117670	CG4898	RG	intron	3	Yes	C	C
YC0096	CG4898	3R:11117688	+	Protein	3	chr3R:11117670	CG4898	RH	intron	3	Yes	C	C
YC0096	CG4898	3R:11117688	+	Protein	3	chr3R:11117670	CG4898	RI	intron	2	Yes	C	C
YC0096	CG4898	3R:11117688	+	Protein	3	chr3R:11117670	CG4898	RJ	intron	3	Yes	C	C
YC0096	CG4898	3R:11117688	+	Protein	3	chr3R:11117670	CG4898	RK	intron	3	Yes	C	C
YC0096	CG4898	3R:11117688	+	Protein	3	chr3R:11117670	CG4898	RL	intron	3	Yes	C	C
YC0102	CG4609	3L:16359607	-	Protein	3	chr3L:16403828	CG4609	RA	intron	1	Yes	C	C
YC0102	CG4609	3L:16359607	-	Protein	3	chr3L:16403828	CG4609	RC	intron	1	Yes	C	C
YC0107	CG5670	3R:16783161	+	Protein	3	chr3R:16783144	CG5670	RA	intron	1	Yes	C	C
YC0107	CG5670	3R:16783161	+	Protein	3	chr3R:16783144	CG5670	RC	intron	1	No	C	
YC0107	CG5670	3R:16783161	+	Protein	3	chr3R:16783144	CG5670	RF	intron	1	No	C	
YC0107	CG5670	3R:16783161	+	Protein	3	chr3R:16783144	CG5670	RG			No	C	
YD0004	CG2922	3R:1425940	-	Protein?	3	chr3R:1425943	CG2922	RA	intron	1	No	A	
YD0004	CG2922	3R:1425940	-	Protein?	3	chr3R:1425943	CG2922	RB	exon	2	No	A	
YD0004	CG2922	3R:1425940	-	Protein?	3	chr3R:1425943	CG2922	RC	intron	1	No	A	
YD0004	CG2922	3R:1425940	-	Protein?	3	chr3R:1425943	CG2922	RD	exon	1	No	A	
YD0004	CG2922	3R:1425940	-	Protein?	3	chr3R:1425943	CG2922	RF	intron	1	No	A	
YD0004	CG2922	3R:1425940	-	Protein?	3	chr3R:1425943	CG2922	RG	intron	1	No	A	
YD0005	CG12092	X:20610855	+	Protein	3	chrX:20809467	CG12092	RA	intron	5	Yes	A	C
YD0013	CG12721	X:11803560	+	Protein	3	chrX:11966933						A	
YD0028	CG14457	3L:22586698	-	Protein	3	chr3L:22662520						A	
YD0029	unknown	2R:4156352	+	Protein	3	chr2R:4983110						A	
YD0035	CG13868	2R:15375411	-	Enhancer	3	chr2R:16199204	CG13868	RA	intron	2	No	A	
YD0037	unknown	2R:4156355	+	Enhancer	3	chr2R:4983113						A	
YD0039	CG33526	2L:872930	+	Enhancer	4	chr2L:872930	CG33526	RA	exon	5	Yes	A	
YD0039	CG33526	2L:872930	+	Enhancer	4	chr2L:872930	CG33526	RB	exon	5	Yes	A	
YD0039	CG33526	2L:872930	+	Enhancer	4	chr2L:872930	CG33526	RC	exon	4	Yes	A	
YD0039	CG33526	2L:872930	+	Enhancer	4	chr2L:872930	CG33526	RD	exon	4	Yes	A	
YD0050	CG12094	X:9868176	+	Protein	3	chrX:10022301	CG34104	RA	intron	4	Yes	A	C
YD0050	CG12094	X:9868176	+	Protein	3	chrX:10022301	CG34104	RB	intron	4	Yes	A	C
YD0056	CG12284	3L:15994681	-	Enhancer	3	chr3L:16038902	CG12284	RA	intron	1	No	A	
YD0056	CG12284	3L:15994681	-	Enhancer	3	chr3L:16038902	CG12284	RB	intron	1	No	A	
YD0062	CG10417	2R:501886	-	Enhancer	3	chr2R:1250521	CG10417	RA	exon	1	No	A	
YD0062	CG10417	2R:501886	-	Enhancer	3	chr2R:1250521	CG10417	RB	intron	1	No	A	
YD0067	CG8103	3L:19826637	-	Protein	3	chr3L:19901199	CG32217	RA	intron	1	No	A	
YD0067	CG8103	3L:19826637	-	Protein	3	chr3L:19901199	CG8103	RA	intron	1	Yes	A	A
YD0067	CG8103	3L:19826637	-	Protein	3	chr3L:19901199	CG8103	RB	intron	1	Yes	A	A
YD0069	CG12284	3L:15995632	-	Enhancer	3	chr3L:16039853	CG12284	RA	exon	1	No	A	
YD0069	CG12284	3L:15995632	-	Enhancer	3	chr3L:16039853	CG12284	RB	intron	1	No	A	
YD0073	CG10417	2R:501886	-	Enhancer	3	chr2R:1250521	CG10417	RA	exon	1	No	A	
YD0073	CG10417	2R:501886	-	Enhancer	3	chr2R:1250521	CG10417	RB	intron	1	No	A	
YD0075	CG5803	2L:18338302	+	Protein	3	chr2L:18360219	CG5803	RA	intron	1	Yes	A	A
YD0075	CG5803	2L:18338302	+	Protein	3	chr2L:18360219	CG5803	RB	intron	1	Yes	A	A
YD0075	CG5803	2L:18338302	+	Protein	3	chr2L:18360219	CG5803	RC	intron	1	Yes	A	A
YD0075	CG5803	2L:18338302	+	Protein	3	chr2L:18360219	CG5803	RD	intron	1	Yes	A	A
YD0076	CG10108	2R:9495346	-	Protein	3	chr2R:10319125	CG10108	RA	intron	1	Yes	A	C
YD0079	CG2999	4:898973	-	Protein	3	chr4:900011	CG2999	RA	intron	8	Yes	A	A
YD0079	CG2999	4:898973	-	Protein	3	chr4:900011	CG2999	RB	intron	8	Yes	A	A
YD0079	CG2999	4:898973	-	Protein	3	chr4:900011	CG2999	RC	intron	9	Yes	A	A
YD0082	CG8815	2R:7656338	-	Enhancer	3	chr2R:8479130	CG8815	RA	intron	1	No	A	
YD0082	CG8815	2R:7656338	-	Enhancer	3	chr2R:8479130	CG8815	RB	intron	1	No	A	
YD0082	CG8815	2R:7656338	-	Enhancer	3	chr2R:8479130	CG8815	RC	intron	1	No	A	
YD0082	CG8815	2R:7656338	-	Enhancer	3	chr2R:8479130	CG8815	RD	intron	1	No	A	
YD0086	CG2922	3R:1425383	-	Protein?	3	chr3R:1425386	CG2922	RA	intron	1	No	A	
YD0086	CG2922	3R:1425383	-	Protein?	3	chr3R:1425386	CG2922	RB	intron	2	No	A	
YD0086	CG2922	3R:1425383	-	Protein?	3	chr3R:1425386	CG2922	RC	intron	2	No	A	
YD0086	CG2922	3R:1425383	-	Protein?	3	chr3R:1425386	CG2922	RD	intron	1	No	A	
YD0086	CG2922	3R:1425383	-	Protein?	3	chr3R:1425386	CG2922	RF	intron	1	No	A	
YD0086	CG2922	3R:1425383	-	Protein?	3	chr3R:1425386	CG2922	RG	intron	1	No	A	
YD0092	CG9924	3R:9851426	+	Protein?	3	chr3R:9851407						A	
YD0107	CG13425	2R:15653001	+	Enhancer	3	chr2R:16476794	CG13425	RA	intron	1	No	A	
YD0107	CG13425	2R:15653001	+	Enhancer	3	chr2R:16476794	CG13425	RB	intron	1	No	A	
YD0107	CG13425	2R:15653001	+	Enhancer	3	chr2R:16476794	CG13425	RC	intron	1	No	A	
YD0108	CG9741	3R:4479690	-	Enhancer	3	chr3R:4479675	CG9741	RB	intron	1	No	A	
YD0110	CG12284	3L:15990898	-	Enhancer	3	chr3L:16035119	CG12284	RA	intron	1	No	A	
YD0110	CG12284	3L:15990898	-	Enhancer	3	chr3L:16035119	CG12284	RB	intron	1	No	A	
YD0110	CG12284	3L:15990898	-	Enhancer	3	chr3L:16035119	CG12284	RC	intron	1	No	A	
YD0113	CG9239	2L:13528929	+	Enhancer	3	chr2L:13546778						A	
YD0121	CG1856	3R:27540143	+	Enhancer	3	chr3R:27550777	CG1856	RB	exon	1	No	A	
YD0121	CG1856	3R:27540143	+	Enhancer	3	chr3R:27550777	CG1856	RC	exon	1	No	A	
YD0121	CG1856	3R:27540143	+	Enhancer	3	chr3R:27550777	CG1856	RE	intron	1	No	A	
YD0121	CG1856	3R:27540143	+	Enhancer	3	chr3R:27550777	CG1856	RF	intron	1	No	A	
YD0130	CG6852	3L:18818590	+	Protein	3	chr3L:18862811	CG6852	RA	exon	2	Yes	A	
YD0134	CG1429	2R:4986493	-	Enhancer	3	chr2R:5813365	CG1429	RA	intron	1	No	A	
YD0134	CG1429	2R:4986493	-	Enhancer	3	chr2R:5813365	CG1429	RB	intron	1	No	A	
YD0134	CG1429	2R:4986493	-	Enhancer	3	chr2R:5813365	CG1429	RC	intron	1	No	A	
YD0134	CG1429	2R:4986493	-	Enhancer	3	chr2R:5813365	CG1429	RD	intron	1	No	A	
YD0134	CG1429	2R:4986493	-	Enhancer	3	chr2R:5813365	CG1429	RE	intron	1	No	A	
YD0134	CG1429	2R:4986493	-	Enhancer	3	chr2R:5813365	CG1429	RF	intron	2	No	A	
YD0135	CG3918	X:6264583	-	Enhancer	3	chrX:6418240						A	
YD0140	CG5499	3R:22682466	+	Protein	3	chr3R:22693101	CG5499	RA	intron	1	Yes	A	C
YD0146	CG17950	2R:16757919	+	Enhancer	3	chr2R:17601873	CG17950	RA	intron	1	No	A	
YD0146	CG17950	2R:16757919	+	Enhancer	3	chr2R:17601873	CG17950	RB	intron	2	No	A	
YD0157	CG1915	3L:2095256	-	Enhancer	3	chr3L:2114627	CG1915	RA	intron	1	No	A	
YD0157	CG1915	3L:2095256	-	Enhancer	3	chr3L:2114627	CG1915	RC	intron	1	No	A	
YD0159	CG4451	3R:15778144	-	Protein	3	chr3R:15778127	CG4451	RA	intron	2	Yes	A	C
YD0162	CG10719	2L:19144448	+	Enhancer	3	chr2L:19166365	CG10719	RA	intron	3	No	A	
YD0162	CG10719	2L:19144448	+	Enhancer	3	chr2L:19166365	CG10719	RB	intron	2	No	A	
YD0165	CG6889	3R:12068817	+	Protein	3	chr3R:12068799	CG6889	RA	intron	1	Yes	A	C
YD0165	CG6889	3R:12068817	+	Protein	3	chr3R:12068799	CG6889	RB	exon	1	No	A	
YD0166	CG1691	X:10559552	-	Enhancer	3	chrX:10711806	CG1691	RF	intron	1	No	A	
YD0166	CG1691	X:10559552	-	Enhancer	3	chrX:10711806	CG1691	RG	intron	1	No	A	
YD0166	CG1691	X:10559552	-	Enhancer	3	chrX:10711806	CG1691	RH	intron	2	No	A	
YD0169	CG9403	2R:1671624	+	Enhancer	3	chr2R:2498227	CG9397	RH	exon	1	No	A	
YD0169	CG9403	2R:1671624	+	Enhancer	3	chr2R:2498227	CG9397	RI	intron	1	Yes	A	B
YD0170	CG6988	3L:15089086	-	Protein	3	chr3L:15133307	CG6988	RA	intron	1	Yes	A	A
YD0170	CG6988	3L:15089086	-	Protein	3	chr3L:15133307	CG6988	RB	intron	1	Yes	A	B
YD0170	CG6988	3L:15089086	-	Protein	3	chr3L:15133307	CG6988	RD	intron	1	No	A	
YD0173	CG9403	2R:1671624	+	Enhancer	3	chr2R:2498227	CG9397	RH	exon	1	No	A	
YD0173	CG9403	2R:1671624	+	Enhancer	3	chr2R:2498227	CG9397	RI	intron	1	Yes	A	B
YD0178	CG2125	4:76652	-	Enhancer	3	chr4:76652	CG2125	RA	exon	1	No	A	
YD0184	CG10293	3R:17859548	+	Enhancer	3	chr3R:17868584	CG10293	RA	intron	1	No	A	
YD0184	CG10293	3R:17859548	+	Enhancer	3	chr3R:17868584	CG10293	RB	intron	1	No	A	
YD0184	CG10293	3R:17859548	+	Enhancer	3	chr3R:17868584	CG10293	RC	intron	1	No	A	
YD0198	CG11387	X:7361648	+	Protein	3	chrX:7515304	CG11387	RA	intron	1	Yes	A	C
YD0205	CG13624	3R:20386010	-	Protein?	3	chr3R:20395353	CG13624	RA	intron	2	No	A	
YD0205	CG13624	3R:20386010	-	Protein?	3	chr3R:20395353	CG13624	RB	intron	2	No	A	
YD0205	CG13624	3R:20386010	-	Protein?	3	chr3R:20395353	CG13624	RC	intron	1	No	A	
YD0205	CG13624	3R:20386010	-	Protein?	3	chr3R:20395353	CG13624	RD	intron	1	No	A	
YD0205	CG13624	3R:20386010	-	Protein?	3	chr3R:20395353	CG13624	RE	intron	2	No	A	
YD0205	CG13624	3R:20386010	-	Protein?	3	chr3R:20395353	CG13624	RF	intron	2	No	A	
YD0208	CG33526	2L:872918	+	Enhancer	4	chr2L:872918	CG33526	RA	exon	5	Yes	A	
YD0208	CG33526	2L:872918	+	Enhancer	4	chr2L:872918	CG33526	RB	exon	5	Yes	A	
YD0208	CG33526	2L:872918	+	Enhancer	4	chr2L:872918	CG33526	RC	exon	4	Yes	A	
YD0208	CG33526	2L:872918	+	Enhancer	4	chr2L:872918	CG33526	RD	exon	4	Yes	A	
YD0213	CG31782	2L:16685320	-	Protein	3	chr2L:16707236	CG31782	RA	intron	2	Yes	A	A
YD0213	CG31782	2L:16685320	-	Protein	3	chr2L:16707236	CG31782	RB	intron	2	Yes	A	A
YD0223	CG9888	2R:18118187	-	Enhancer	3	chr2R:18962142	CG9888	RA	exon	1	No	A	
YD0226	CG18350	X:6835727	-	Enhancer	4	chrX:6884524						A	
YD0228	CG30469	2R:10565890	-	Enhancer	3	chr2R:11389670						A	
YD0233	CG10023	2R:14501284	-	Enhancer	3	chr2R:15325069						A	
YD0236	unknown	2R:4614429	+	Enhancer	4	chr2R:4990121	CG8777	RA	exon	11	Yes	A	
YD0238	CG14521	3R:24746830	-	Enhancer	3	chr3R:24757464	CG14521	RA	intron	1	No	A	
YD0239	unknown	2R:11893066	+	Enhancer	3	chr2R:12716846						A	
YD0246	CG1395	3R:25069285	-	Protein	3	chr3R:25079919	CG1395	RA	intron	1	Yes	A	B
YD0256	CG1429	2R:4987378	-	Enhancer	3	chr2R:5814250	CG1429	RA	intron	1	No	A	
YD0256	CG1429	2R:4987378	-	Enhancer	3	chr2R:5814250	CG1429	RB	intron	1	No	A	
YD0256	CG1429	2R:4987378	-	Enhancer	3	chr2R:5814250	CG1429	RC	intron	1	No	A	
YD0256	CG1429	2R:4987378	-	Enhancer	3	chr2R:5814250	CG1429	RD	intron	1	No	A	
YD0256	CG1429	2R:4987378	-	Enhancer	3	chr2R:5814250	CG1429	RE	intron	1	No	A	
YD0256	CG1429	2R:4987378	-	Enhancer	3	chr2R:5814250	CG1429	RF	intron	2	No	A	
YD0257	CG5920	2L:9889371	-	Enhancer	3	chr2L:9897142	CG5920	RA	intron	1	No	A	
YD0259	CG8291	2R:10985655	-	Protein	3	chr2R:11809435	CG8355	RA	exon	1	No	A	
YD0259	CG8291	2R:10985655	-	Protein	3	chr2R:11809435	CG8355	RB	exon	1	No	A	
YD0259	CG8291	2R:10985655	-	Protein	3	chr2R:11809435	CG8355	RC	exon	1	No	A	
YD0269	CG11081	4:1046244	-	Enhancer	3	chr4:1047418	CG11081	RA	intron	1	No	A	
YD0269	CG11081	4:1046244	-	Enhancer	3	chr4:1047418	CG11081	RB	exon	1	No	A	
YD0269	CG11081	4:1046244	-	Enhancer	3	chr4:1047418	CG11081	RC	intron	1	No	A	
YD0269	CG11081	4:1046244	-	Enhancer	3	chr4:1047418	CG11081	RD	exon	1	No	A	
YD0269	CG11081	4:1046244	-	Enhancer	3	chr4:1047418	CG11081	RE	intron	1	No	A	
YD0283	CG15274	2L:15005051	-	Enhancer	3	chr2L:15026966						A	
YD0298	CG1856	3R:27542049	+	Enhancer	3	chr3R:27552683	CG1856	RA	intron	1	No	A	
YD0298	CG1856	3R:27542049	+	Enhancer	3	chr3R:27552683	CG1856	RB	intron	1	No	A	
YD0298	CG1856	3R:27542049	+	Enhancer	3	chr3R:27552683	CG1856	RC	intron	1	No	A	
YD0298	CG1856	3R:27542049	+	Enhancer	3	chr3R:27552683	CG1856	RD	intron	1	No	A	
YD0298	CG1856	3R:27542049	+	Enhancer	3	chr3R:27552683	CG1856	RE	intron	1	No	A	
YD0298	CG1856	3R:27542049	+	Enhancer	3	chr3R:27552683	CG1856	RF	intron	1	No	A	
YD0302	CG4264	3R:11069273	+	Enhancer	3	chr3R:11069255	CG4264	RA	intron	1	No	A	
YD0302	CG4264	3R:11069273	+	Enhancer	3	chr3R:11069255	CG4264	RC	intron	1	No	A	
YD0302	CG4264	3R:11069273	+	Enhancer	3	chr3R:11069255	CG4264	RD	intron	1	No	A	
YD0302	CG4264	3R:11069273	+	Enhancer	3	chr3R:11069255	CG4264	RE	intron	1	No	A	
YD0315	CG16890	2L:13764583	-	Protein	3	chr2L:13782431						A	
YD0334	CG13316	X:3436821	+	Enhancer	3	chrX:3582848	CG13316	RC	intron	1	No	A	
YD0336	CG4027	X:5641371	+	Enhancer	3	chrX:5795028	CG4027	RA	exon	1	No	A	
YD0336	CG4027	X:5641371	+	Enhancer	3	chrX:5795028	CG4027	RC	exon	1	No	A	
YD0336	CG4027	X:5641371	+	Enhancer	3	chrX:5795028	CG4027	RD	exon	1	No	A	
YD0337	CG3619	3R:15151676	-	Enhancer	3	chr3R:15151659	CG3619	RA	exon	1	No	A	
YD0337	CG3619	3R:15151676	-	Enhancer	3	chr3R:15151659	CG3619	RB	exon	1	No	A	
YD0354	CG31811	2L:13858868	-	Enhancer	3	chr2L:13876716						A	
YD0359	CG8989	X:8895044	-	Enhancer	3	chrX:9050093	CG8989	RA	intron	1	No	A	
YD0375	CG10341	2L:18676885	+	Enhancer	3	chr2L:18698802	CG10341	RA	exon	1	No	A	
YD0375	CG10341	2L:18676885	+	Enhancer	3	chr2L:18698802	CG10341	RB	intron	1	Yes	A	A
YD0377	CG7255	3L:15257795	-	Enhancer	3	chr3L:15302016						A	
YD0390	CG7843	2R:1224144	-	Enhancer	3	chr2R:1972781	CG7843	RA	intron	1	No	A	
YD0390	CG7843	2R:1224144	-	Enhancer	3	chr2R:1972781	CG7843	RB	intron	1	No	A	
YD0390	CG7843	2R:1224144	-	Enhancer	3	chr2R:1972781	CG7843	RC	intron	1	No	A	
YD0390	CG7843	2R:1224144	-	Enhancer	3	chr2R:1972781	CG7843	RD	exon	1	No	A	
YD0392	CG1856	3R:27540311	+	Enhancer	3	chr3R:27550945	CG1856	RB	exon	1	No	A	
YD0392	CG1856	3R:27540311	+	Enhancer	3	chr3R:27550945	CG1856	RC	exon	1	No	A	
YD0392	CG1856	3R:27540311	+	Enhancer	3	chr3R:27550945	CG1856	RE	intron	1	No	A	
YD0392	CG1856	3R:27540311	+	Enhancer	3	chr3R:27550945	CG1856	RF	intron	1	No	A	
YD0398	CG12223	X:16065308	+	Protein	3	chrX:16228322	CG12223	RA	intron	1	No	A	
YD0398	CG12223	X:16065308	+	Protein	3	chrX:16228322	CG12223	RB	intron	1	No	A	
YD0398	CG12223	X:16065308	+	Protein	3	chrX:16228322	CG12223	RC	intron	1	No	A	
YD0398	CG12223	X:16065308	+	Protein	3	chrX:16228322	CG12223	RD	exon	1	No	A	
YD0398	CG12223	X:16065308	+	Protein	3	chrX:16228322	CG12223	RE	intron	1	No	A	
YD0403	CG9381	3R:5375465	-	Enhancer	3	chr3R:5375449	CG9381	RA	intron	1	No	A	
YD0403	CG9381	3R:5375465	-	Enhancer	3	chr3R:5375449	CG9381	RB	intron	1	No	A	
YD0403	CG9381	3R:5375465	-	Enhancer	3	chr3R:5375449	CG9381	RC	intron	2	No	A	
YD0404	CG32541	X:18677248	+	Enhancer	3	chrX:18840323	CG32541	RA	intron	2	No	A	
YD0409	CG8103	3L:19814591	-	Protein	3	chr3L:19889153	CG32217	RA	intron	4	No	A	
YD0409	CG8103	3L:19814591	-	Protein	3	chr3L:19889153	CG8103	RA	intron	1	Yes	A	A
YD0409	CG8103	3L:19814591	-	Protein	3	chr3L:19889153	CG8103	RB	intron	1	Yes	A	A
YD0415	CG1395	3R:25070240	-	Enhancer	3	chr3R:25080874	CG1395	RA	exon	1	No	A	
YD0417	CG16786	2R:19129648	+	Protein	3	chr2R:19973603	CG16786	RA	exon	6	No	A	
YD0417	CG16786	2R:19129648	+	Protein	3	chr2R:19973603	CG16786	RB	exon	5	No	A	
YD0421	CG2922	3R:1426480	-	Protein?	3	chr3R:1426483	CG2922	RA	intron	1	No	A	
YD0421	CG2922	3R:1426480	-	Protein?	3	chr3R:1426483	CG2922	RG	intron	1	No	A	
YD0523	CG16747	2R:7236575	-	Protein	3	chr2R:8059367	CG16747	RA	intron	1	Yes	A	B
YD0528	CG11901	3R:25035367	+	Enhancer	3	chr3R:25046001	CG11901	RA	exon	1	No	A	
YD0528	CG11901	3R:25035367	+	Enhancer	3	chr3R:25046001	CG11901	RB	exon	2	No	A	
YD0558	CG7590	3L:11210360	+	Enhancer	3	chr3L:11245928	CG7590	RA	exon	1	No	A	
YD0558	CG7590	3L:11210360	+	Enhancer	3	chr3L:11245928	CG7590	RB	exon	1	No	A	
YD0570	unknown	2R:11893335	+	Enhancer	3	chr2R:12717115						A	
YD0572	CG1242	3L:3174144	+	Enhancer	3	chr3L:3193515	CG1242	RA	intron	1	No	A	
YD0574	CG1856	3R:27541247	+	Enhancer	3	chr3R:27551881	CG1856	RA	intron	1	No	A	
YD0574	CG1856	3R:27541247	+	Enhancer	3	chr3R:27551881	CG1856	RB	intron	1	No	A	
YD0574	CG1856	3R:27541247	+	Enhancer	3	chr3R:27551881	CG1856	RC	intron	1	No	A	
YD0574	CG1856	3R:27541247	+	Enhancer	3	chr3R:27551881	CG1856	RD	intron	1	No	A	
YD0574	CG1856	3R:27541247	+	Enhancer	3	chr3R:27551881	CG1856	RE	intron	1	No	A	
YD0574	CG1856	3R:27541247	+	Enhancer	3	chr3R:27551881	CG1856	RF	intron	1	No	A	
YD0584	CG4898	3R:11107212	+	Enhancer	3	chr3R:11107194						A	
YD0603	CG1643	X:7061701	-	Protein	3	chrX:7215357	CG1643	RA	intron	5	Yes	A	A
YD0612	CG32521	X:20952870	+	Protein	3	chrX:21151484						A	
YD0614	CG7590	3L:11210125	+	Enhancer	3	chr3L:11245693	CG7590	RA	exon	1	No	A	
YD0614	CG7590	3L:11210125	+	Enhancer	3	chr3L:11245693	CG7590	RB	exon	1	No	A	
YD0619	CG1242	3L:3174261	+	Enhancer	3	chr3L:3193632	CG1242	RA	intron	1	No	A	
YD0623	CG10279	3R:1831339	-	Protein	3	chr3R:1831342	CG10279	RA	intron	1	Yes	A	B
YD0623	CG10279	3R:1831339	-	Protein	3	chr3R:1831342	CG10279	RB	intron	1	No	A	
YD0623	CG10279	3R:1831339	-	Protein	3	chr3R:1831342	CG10279	RC	intron	2	No	A	
YD0623	CG10279	3R:1831339	-	Protein	3	chr3R:1831342	CG10279	RD	intron	2	Yes	A	B
YD0623	CG10279	3R:1831339	-	Protein	3	chr3R:1831342	CG10279	RE	intron	2	Yes	A	B
YD0623	CG10279	3R:1831339	-	Protein	3	chr3R:1831342	CG10279	RF	intron	1	No	A	
YD0639	CG32067	3L:10639029	+	Enhancer	4	chr3L:10658182	CG32067	RA	exon	1	No	A	
YD0639	CG32067	3L:10639029	+	Enhancer	4	chr3L:10658182	CG32067	RB	exon	2	No	A	
YD0639	CG32067	3L:10639029	+	Enhancer	4	chr3L:10658182	CG32067	RC	exon	1	No	A	
YD0649	CG8049	2L:8269222	-	Protein	3	chr2L:8276991	CG8049	RA	intron	1	No	A	
YD0649	CG8049	2L:8269222	-	Protein	3	chr2L:8276991	CG8049	RB	intron	5	Yes	A	A
YD0649	CG8049	2L:8269222	-	Protein	3	chr2L:8276991	CG8049	RC	intron	1	No	A	
YD0649	CG8049	2L:8269222	-	Protein	3	chr2L:8276991	CG8049	RD	intron	5	Yes	A	A
YD0649	CG8049	2L:8269222	-	Protein	3	chr2L:8276991	CG8049	RE	intron	6	Yes	A	A
YD0650	CG10293	3R:17859051	+	Enhancer	3	chr3R:17868087	CG10293	RA	intron	1	No	A	
YD0650	CG10293	3R:17859051	+	Enhancer	3	chr3R:17868087	CG10293	RB	intron	1	No	A	
YD0650	CG10293	3R:17859051	+	Enhancer	3	chr3R:17868087	CG10293	RC	intron	1	No	A	
YD0652	unknown	2R:11893808	+	Enhancer	3	chr2R:12717588						A	
YD0658	CG7450	3L:15484546	+	Enhancer	3	chr3L:15528767	CG7450	RA	exon	1	No	A	
YD0658	CG7450	3L:15484546	+	Enhancer	3	chr3L:15528767	CG7450	RB	exon	1	No	A	
YD0659	CG6697	3R:18877940	-	Enhancer	3	chr3R:18887284						A	
YD0661	unknown	2R:11893724	+	Enhancer	3	chr2R:12717504						A	
YD0666	CG13624	3R:20398058	+	Enhancer	3	chr3R:20407401						A	
YD0667	unknown	2R:11847325	-	Enhancer	3	chr2R:12671105						A	
YD0670	CG4747	2L:9997790	-	Enhancer	3	chr2L:10005381						A	
YD0671	CG18497	2L:161010	+	Enhancer	3	chr2L:161010	CG18497	RA	intron	1	No	A	
YD0671	CG18497	2L:161010	+	Enhancer	3	chr2L:161010	CG18497	RB	intron	1	No	A	
YD0681	CG2125	4:74745	-	Protein	3	chr4:74745	CG2125	RA	intron	1	Yes	A	B
YD0685	CG1395	3R:25069288	-	Protein	3	chr3R:25079922	CG1395	RA	intron	1	Yes	A	B
YD0688	CG4290	X:1818372	-	Enhancer	3	chrX:1955633	CG4290	RA	intron	1	No	A	
YD0692	CG1921	3L:3394193	-	Enhancer	3	chr3L:3413564	CG1921	RB	intron	1	No	A	
YD0692	CG1921	3L:3394193	-	Enhancer	3	chr3L:3413564	CG1921	RC	intron	1	No	A	
YD0693	CG6988	3L:15089598	-	Protein	3	chr3L:15133819	CG6988	RA	intron	1	Yes	A	A
YD0693	CG6988	3L:15089598	-	Protein	3	chr3L:15133819	CG6988	RB	intron	1	Yes	A	B
YD0693	CG6988	3L:15089598	-	Protein	3	chr3L:15133819	CG6988	RD	intron	1	No	A	
YD0696	CG17921	2R:16745552	-	Enhancer	3	chr2R:17589506	CG17921	RA	intron	1	No	A	
YD0696	CG17921	2R:16745552	-	Enhancer	3	chr2R:17589506	CG17921	RB	intron	1	No	A	
YD0698	CG18812	2R:2791103	+	Enhancer	3	chr2R:3617707						A	
YD0722	CG7524	3L:4603411	-	Enhancer	3	chr3L:4625470	CG7524	RB	intron	1	No	A	
YD0722	CG7524	3L:4603411	-	Enhancer	3	chr3L:4625470	CG7524	RC	intron	1	No	A	
YD0722	CG7524	3L:4603411	-	Enhancer	3	chr3L:4625470	CG7524	RD	intron	1	No	A	
YD0722	CG7524	3L:4603411	-	Enhancer	3	chr3L:4625470	CG7524	RE	intron	1	No	A	
YD0722	CG7524	3L:4603411	-	Enhancer	3	chr3L:4625470	CG7524	RF	intron	1	No	A	
YD0723	CG9218	2R:14693754	-	Enhancer	3	chr2R:15517539	CG9218	RA	intron	1	No	A	
YD0723	CG9218	2R:14693754	-	Enhancer	3	chr2R:15517539	CG9218	RC	intron	1	No	A	
YD0723	CG9218	2R:14693754	-	Enhancer	3	chr2R:15517539	CG9218	RE	intron	1	No	A	
YD0723	CG9218	2R:14693754	-	Enhancer	3	chr2R:15517539	CG9218	RF	intron	1	No	A	
YD0728	CG18076	2R:8930599	-	Protein	3	chr2R:9753390	CG18076	RA	intron	30	Yes	A	B
YD0728	CG18076	2R:8930599	-	Protein	3	chr2R:9753390	CG18076	RB	intron	30	Yes	A	B
YD0728	CG18076	2R:8930599	-	Protein	3	chr2R:9753390	CG18076	RC	intron	23	Yes	A	B
YD0728	CG18076	2R:8930599	-	Protein	3	chr2R:9753390	CG18076	RE	intron	26	Yes	A	B
YD0728	CG18076	2R:8930599	-	Protein	3	chr2R:9753390	CG18076	RG	intron	30	Yes	A	B
YD0728	CG18076	2R:8930599	-	Protein	3	chr2R:9753390	CG18076	RH	intron	27	Yes	A	B
YD0747	CG3166	2L:2166659	-	Enhancer	3	chr2L:2174092	CG3166	RB	intron	1	No	A	
YD0758	CG33070	X:6832464	-	Protein	3	chrX:6986121	CG14425	RA	exon	2	No	A	
YD0758	CG33070	X:6832464	-	Protein	3	chrX:6986121	CG18350	RA	intron	2	No	A	
YD0758	CG33070	X:6832464	-	Protein	3	chrX:6986121	CG18350	RB	exon	2	No	A	
YD0758	CG33070	X:6832464	-	Protein	3	chrX:6986121	CG18350	RC	intron	1	Yes	A	B
YD0758	CG33070	X:6832464	-	Protein	3	chrX:6986121	CG18350	RD	exon	2	No	A	
YD0758	CG33070	X:6832464	-	Protein	3	chrX:6986121	CG18350	RE	intron	2	No	A	
YD0758	CG33070	X:6832464	-	Protein	3	chrX:6986121	CG18350	RF	exon	2	No	A	
YD0758	CG33070	X:6832464	-	Protein	3	chrX:6986121	CG18350	RG	exon	3	No	A	
YD0758	CG33070	X:6832464	-	Protein	3	chrX:6986121	CG18350	RH	exon	2	No	A	
YD0758	CG33070	X:6832464	-	Protein	3	chrX:6986121	CG18350	RI	intron	1	No	A	
YD0758	CG33070	X:6832464	-	Protein	3	chrX:6986121	CG18350	RJ	exon	2	No	A	
YD0758	CG33070	X:6832464	-	Protein	3	chrX:6986121	CG18350	RK	exon	2	No	A	
YD0758	CG33070	X:6832464	-	Protein	3	chrX:6986121	CG18350	RL	exon	2	No	A	
YD0758	CG33070	X:6832464	-	Protein	3	chrX:6986121	CG18350	RM	exon	2	No	A	
YD0758	CG33070	X:6832464	-	Protein	3	chrX:6986121	CG18350	RN	intron	1	Yes	A	B
YD0758	CG33070	X:6832464	-	Protein	3	chrX:6986121	CG18350	RO	intron	1	Yes	A	B
YD0767	CG17870	2R:5161719	+	Enhancer	3	chr2R:5988591	CG17870	RA	exon	1	No	A	
YD0767	CG17870	2R:5161719	+	Enhancer	3	chr2R:5988591	CG17870	RB	intron	1	No	A	
YD0767	CG17870	2R:5161719	+	Enhancer	3	chr2R:5988591	CG17870	RC	exon	1	No	A	
YD0767	CG17870	2R:5161719	+	Enhancer	3	chr2R:5988591	CG17870	RD	exon	1	No	A	
YD0767	CG17870	2R:5161719	+	Enhancer	3	chr2R:5988591	CG17870	RE	intron	1	No	A	
YD0767	CG17870	2R:5161719	+	Enhancer	3	chr2R:5988591	CG17870	RF	intron	1	No	A	
YD0767	CG17870	2R:5161719	+	Enhancer	3	chr2R:5988591	CG17870	RG	exon	1	No	A	
YD0767	CG17870	2R:5161719	+	Enhancer	3	chr2R:5988591	CG17870	RH	intron	1	No	A	
YD0767	CG17870	2R:5161719	+	Enhancer	3	chr2R:5988591	CG17870	RI	exon	1	No	A	
YD0767	CG17870	2R:5161719	+	Enhancer	3	chr2R:5988591	CG17870	RJ	exon	1	No	A	
YD0780	CG7543	3L:11439432	-	Enhancer	3	chr3L:11475000						A	
YD0783	CG17927	2L:16746790	+	Protein	3	chr2L:16768706	CG17927	RA	exon	1	Yes	A	
YD0783	CG17927	2L:16746790	+	Protein	3	chr2L:16768706	CG17927	RB	exon	1	Yes	A	
YD0783	CG17927	2L:16746790	+	Protein	3	chr2L:16768706	CG17927	RC	exon	1	Yes	A	
YD0783	CG17927	2L:16746790	+	Protein	3	chr2L:16768706	CG17927	RD	exon	1	Yes	A	
YD0783	CG17927	2L:16746790	+	Protein	3	chr2L:16768706	CG17927	RE	exon	1	Yes	A	
YD0783	CG17927	2L:16746790	+	Protein	3	chr2L:16768706	CG17927	RF	exon	1	Yes	A	
YD0783	CG17927	2L:16746790	+	Protein	3	chr2L:16768706	CG17927	RG	exon	1	Yes	A	
YD0783	CG17927	2L:16746790	+	Protein	3	chr2L:16768706	CG17927	RH	exon	1	Yes	A	
YD0783	CG17927	2L:16746790	+	Protein	3	chr2L:16768706	CG17927	RI	exon	1	Yes	A	
YD0783	CG17927	2L:16746790	+	Protein	3	chr2L:16768706	CG17927	RJ	exon	1	Yes	A	
YD0783	CG17927	2L:16746790	+	Protein	3	chr2L:16768706	CG17927	RK	exon	1	Yes	A	
YD0783	CG17927	2L:16746790	+	Protein	3	chr2L:16768706	CG17927	RL	exon	1	Yes	A	
YD0783	CG17927	2L:16746790	+	Protein	3	chr2L:16768706	CG17927	RM	exon	1	Yes	A	
YD0784	CG7879	3L:1549009	-	Enhancer	3	chr3L:1568380	CG7879	RA	intron	1	No	A	
YD0784	CG7879	3L:1549009	-	Enhancer	3	chr3L:1568380	CG7879	RB	intron	1	No	A	
YD0787	CG17921	2R:16745552	-	Enhancer	3	chr2R:17589506	CG17921	RA	intron	1	No	A	
YD0787	CG17921	2R:16745552	-	Enhancer	3	chr2R:17589506	CG17921	RB	intron	1	No	A	
YD0788	CG13425	2R:15654319	+	Protein	3	chr2R:16478112	CG13425	RA	intron	1	No	A	
YD0788	CG13425	2R:15654319	+	Protein	3	chr2R:16478112	CG13425	RB	intron	2	No	A	
YD0788	CG13425	2R:15654319	+	Protein	3	chr2R:16478112	CG13425	RC	intron	2	Yes	A	A
YD0800	CG12223	X:16065044	+	Enhancer	3	chrX:16228058	CG12223	RA	intron	1	No	A	
YD0800	CG12223	X:16065044	+	Enhancer	3	chrX:16228058	CG12223	RB	intron	1	No	A	
YD0800	CG12223	X:16065044	+	Enhancer	3	chrX:16228058	CG12223	RC	exon	1	No	A	
YD0800	CG12223	X:16065044	+	Enhancer	3	chrX:16228058	CG12223	RD	exon	1	No	A	
YD0800	CG12223	X:16065044	+	Enhancer	3	chrX:16228058	CG12223	RE	intron	1	No	A	
YD0812	CG14938	2L:11794666	-	Enhancer	3	chr2L:11805795	CG14938	RA	intron	2	No	A	
YD0812	CG14938	2L:11794666	-	Enhancer	3	chr2L:11805795	CG14938	RB	intron	2	No	A	
YD0812	CG14938	2L:11794666	-	Enhancer	3	chr2L:11805795	CG14938	RC	intron	2	No	A	
YD0812	CG14938	2L:11794666	-	Enhancer	3	chr2L:11805795	CG14938	RD	intron	2	No	A	
YD0816	CG11525	3R:27420477	-	Enhancer	3	chr3R:27431111	CG11525	RA	intron	1	No	A	
YD0816	CG11525	3R:27420477	-	Enhancer	3	chr3R:27431111	CG11525	RB	intron	1	No	A	
YD0816	CG11525	3R:27420477	-	Enhancer	3	chr3R:27431111	CG11525	RC	intron	1	No	A	
YD0816	CG11525	3R:27420477	-	Enhancer	3	chr3R:27431111	CG11525	RD	intron	1	No	A	
YD0816	CG11525	3R:27420477	-	Enhancer	3	chr3R:27431111	CG11525	RE	intron	1	No	A	
YD0817	CG4807	2L:11220654	+	Enhancer	3	chr2L:11231782	CG4807	RA	intron	3	No	A	
YD0817	CG4807	2L:11220654	+	Enhancer	3	chr2L:11231782	CG4807	RB	intron	3	No	A	
YD0826	CG8280	2R:6957140	+	Enhancer	3	chr2R:7779932	CG8280	RA	intron	1	No	A	
YD0826	CG8280	2R:6957140	+	Enhancer	3	chr2R:7779932	CG8280	RB	intron	1	No	A	
YD0827	CG13425	2R:15653141	+	Enhancer	3	chr2R:16476934	CG13425	RA	intron	1	No	A	
YD0827	CG13425	2R:15653141	+	Enhancer	3	chr2R:16476934	CG13425	RB	intron	1	No	A	
YD0827	CG13425	2R:15653141	+	Enhancer	3	chr2R:16476934	CG13425	RC	intron	1	No	A	
YD0831	CG2530	3R:912007	-	Enhancer	3	chr3R:912010	CG2530	RA	exon	1	No	A	
YD0832	CG17952	2R:16764416	+	Enhancer	3	chr2R:17608370	CG17952	RA	intron	1	No	A	
YD0832	CG17952	2R:16764416	+	Enhancer	3	chr2R:17608370	CG17952	RB	exon	2	No	A	
YD0832	CG17952	2R:16764416	+	Enhancer	3	chr2R:17608370	CG17952	RC	exon	1	No	A	
YD0836	CG5408	3L:20319996	-	Enhancer	3	chr3L:20394558	CG5408	RA	exon	1	No	A	
YD0837	CG5408	3L:20319996	-	Enhancer	3	chr3L:20394558	CG5408	RA	exon	1	No	A	
YD0838	CG11798	2R:10192983	+	Enhancer	4	chr2R:10565625						A	
YD0839	CG1691	X:10557167	-	Enhancer	3	chrX:10709420	CG1691	RD	intron	1	No	A	
YD0839	CG1691	X:10557167	-	Enhancer	3	chrX:10709420	CG1691	RF	intron	1	No	A	
YD0839	CG1691	X:10557167	-	Enhancer	3	chrX:10709420	CG1691	RG	intron	1	No	A	
YD0839	CG1691	X:10557167	-	Enhancer	3	chrX:10709420	CG1691	RH	intron	2	No	A	
YD0842	CG12052	2R:5597586	-	Enhancer	3	chr2R:6424458	CG12052	RC	intron	1	No	A	
YD0842	CG12052	2R:5597586	-	Enhancer	3	chr2R:6424458	CG12052	RG	intron	1	No	A	
YD0842	CG12052	2R:5597586	-	Enhancer	3	chr2R:6424458	CG12052	RH	intron	1	No	A	
YD0842	CG12052	2R:5597586	-	Enhancer	3	chr2R:6424458	CG12052	RJ	intron	1	No	A	
YD0842	CG12052	2R:5597586	-	Enhancer	3	chr2R:6424458	CG12052	RN	intron	1	No	A	
YD0842	CG12052	2R:5597586	-	Enhancer	3	chr2R:6424458	CG12052	RO	intron	1	No	A	
YD0842	CG12052	2R:5597586	-	Enhancer	3	chr2R:6424458	CG12052	RP	intron	1	No	A	
YD0842	CG12052	2R:5597586	-	Enhancer	3	chr2R:6424458	CG12052	RR	intron	1	No	A	
YD0842	CG12052	2R:5597586	-	Enhancer	3	chr2R:6424458	CG12052	RW	intron	1	No	A	
YD0842	CG12052	2R:5597586	-	Enhancer	3	chr2R:6424458	CG12052	RX	intron	1	No	A	
YD0842	CG12052	2R:5597586	-	Enhancer	3	chr2R:6424458	CG12052	RY	intron	1	No	A	
YD0845	CG6376	3R:17449556	-	Enhancer	3	chr3R:17458592	CG6376	RA	exon	1	No	A	
YD0845	CG6376	3R:17449556	-	Enhancer	3	chr3R:17458592	CG6376	RB	intron	2	No	A	
YD0845	CG6376	3R:17449556	-	Enhancer	3	chr3R:17458592	CG6376	RC	intron	1	No	A	
YD0846	CG10576	3L:5724537	-	Protein	3	chr3L:5758329	CG10576	RA	intron	1	Yes	A	A
YD0846	CG10576	3L:5724537	-	Protein	3	chr3L:5758329	CG10576	RB	exon	1	No	A	
YD0850	CG14195	X:18939674	+	Protein	3	chrX:19102747						A	
YD0852	CG10160	3L:6220456	-	Enhancer	3	chr3L:6254027	CG10160	RA	intron	1	No	A	
YD0853	CG5803	2L:18334882	+	Protein	3	chr2L:18356799	CG5803	RA	intron	1	Yes	A	A
YD0853	CG5803	2L:18334882	+	Protein	3	chr2L:18356799	CG5803	RB	intron	1	Yes	A	A
YD0853	CG5803	2L:18334882	+	Protein	3	chr2L:18356799	CG5803	RC	intron	1	Yes	A	A
YD0853	CG5803	2L:18334882	+	Protein	3	chr2L:18356799	CG5803	RD	intron	1	Yes	A	A
YD0876	CG9821	3R:4645681	-	Enhancer	3	chr3R:4645666	CG9821	RA	exon	1	No	A	
YD0876	CG9821	3R:4645681	-	Enhancer	3	chr3R:4645666	CG9821	RB	intron	1	No	A	
YD0878	CG8049	2L:8265868	-	Protein	3	chr2L:8273637	CG8049	RA	intron	1	No	A	
YD0878	CG8049	2L:8265868	-	Protein	3	chr2L:8273637	CG8049	RB	intron	5	Yes	A	A
YD0878	CG8049	2L:8265868	-	Protein	3	chr2L:8273637	CG8049	RC	intron	1	No	A	
YD0878	CG8049	2L:8265868	-	Protein	3	chr2L:8273637	CG8049	RD	intron	5	Yes	A	A
YD0878	CG8049	2L:8265868	-	Protein	3	chr2L:8273637	CG8049	RE	intron	6	Yes	A	A
YD0878	CG8049	2L:8265868	-	Protein	3	chr2L:8273637	CG8049	RF	exon	1	No	A	
YD0882	CG13388	2L:8408487	+	Enhancer	3	chr2L:8416256	CG13388	RA	intron	1	No	A	
YD0882	CG13388	2L:8408487	+	Enhancer	3	chr2L:8416256	CG13388	RD	intron	1	No	A	
YD0883	CG2530	3R:912046	-	Enhancer	3	chr3R:912049	CG2530	RA	exon	1	No	A	
YD0892	CG8815	2R:7652090	-	Enhancer	3	chr2R:8474882	CG8815	RA	intron	1	No	A	
YD0892	CG8815	2R:7652090	-	Enhancer	3	chr2R:8474882	CG8815	RB	intron	1	No	A	
YD0892	CG8815	2R:7652090	-	Enhancer	3	chr2R:8474882	CG8815	RC	intron	1	No	A	
YD0892	CG8815	2R:7652090	-	Enhancer	3	chr2R:8474882	CG8815	RD	intron	1	No	A	
YD0896	CG11901	3R:25035340	+	Enhancer	3	chr3R:25045974	CG11901	RA	exon	1	No	A	
YD0896	CG11901	3R:25035340	+	Enhancer	3	chr3R:25045974	CG11901	RB	intron	1	No	A	
YD0897	CG4217	3R:16401595	+	Enhancer	3	chr3R:16401578						A	
YD0907	CG15591	3R:2080354	+	Enhancer	3	chr3R:2080354						A	
YD0911	CG9821	3R:4644610	-	Enhancer	3	chr3R:4644595	CG9821	RA	exon	2	No	A	
YD0911	CG9821	3R:4644610	-	Enhancer	3	chr3R:4644595	CG9821	RB	exon	2	No	A	
YD0915	CG7533	3L:11445570	+	Enhancer	3	chr3L:11481138	CG7533	RC	exon	1	No	A	
YD0917	CG8280	2R:6957835	+	Enhancer	3	chr2R:7780627	CG8280	RA	intron	1	No	A	
YD0917	CG8280	2R:6957835	+	Enhancer	3	chr2R:7780627	CG8280	RB	intron	1	No	A	
YD0922	CG2207	2L:21461853	-	Protein	3	chr2L:21628732	CG2207	RA	intron	1	Yes	A	B
YD0922	CG2207	2L:21461853	-	Protein	3	chr2L:21628732	CG2207	RB	intron	2	Yes	A	B
YD0922	CG2207	2L:21461853	-	Protein	3	chr2L:21628732	CG2207	RF	intron	1	Yes	A	B
YD0927	CG10626	3L:5480834	-	Enhancer	3	chr3L:5514626	CG10626	RA	intron	1	No	A	
YD0929	CG31761	2L:12368701	-	Enhancer	3	chr2L:12379830						A	
YD0930	CG9412	3R:9473862	+	Enhancer	3	chr3R:9473843	CG9412	RA	intron	2	No	A	
YD0930	CG9412	3R:9473862	+	Enhancer	3	chr3R:9473843	CG9412	RB	intron	1	No	A	
YD0930	CG9412	3R:9473862	+	Enhancer	3	chr3R:9473843	CG9412	RC	intron	1	No	A	
YD0930	CG9412	3R:9473862	+	Enhancer	3	chr3R:9473843	CG9412	RE	intron	2	No	A	
YD0931	CG32264	3L:3733809	+	Enhancer	3	chr3L:3753180						A	
YD0942	CG15234	2R:1673648	+	Enhancer	3	chr2R:2500251	CG9397	RH	intron	1	No	A	
YD0942	CG15234	2R:1673648	+	Enhancer	3	chr2R:2500251	CG9397	RI	intron	1	Yes	A	B
YD0947	CG4125	X:2715920	-	Enhancer	3	chrX:2853182	CG4125	RA	intron	2	No	A	
YD0948	CG7437	3L:21798492	+	Enhancer	3	chr3L:21874314	CG7437	RA	intron	1	No	A	
YD0948	CG7437	3L:21798492	+	Enhancer	3	chr3L:21874314	CG7437	RB	intron	1	No	A	
YD0948	CG7437	3L:21798492	+	Enhancer	3	chr3L:21874314	CG7437	RC	intron	1	No	A	
YD0948	CG7437	3L:21798492	+	Enhancer	3	chr3L:21874314	CG7437	RD	intron	1	No	A	
YD0952	CG3619	3R:15151811	-	Enhancer	3	chr3R:15151794	CG3619	RA	exon	1	No	A	
YD0952	CG3619	3R:15151811	-	Enhancer	3	chr3R:15151794	CG3619	RB	exon	1	No	A	
YD0953	CG11798	2R:10199775	+	Enhancer	4	chr2R:10572417						A	
YD0954	CG7437	3L:21798492	+	Enhancer	3	chr3L:21874314	CG7437	RA	intron	1	No	A	
YD0954	CG7437	3L:21798492	+	Enhancer	3	chr3L:21874314	CG7437	RB	intron	1	No	A	
YD0954	CG7437	3L:21798492	+	Enhancer	3	chr3L:21874314	CG7437	RC	intron	1	No	A	
YD0954	CG7437	3L:21798492	+	Enhancer	3	chr3L:21874314	CG7437	RD	intron	1	No	A	
YD0963	CG9261	2L:6787269	+	Enhancer	3	chr2L:6795053						A	
YD0964	CG8049	2L:8268021	-	Protein	3	chr2L:8275790	CG8049	RA	intron	1	No	A	
YD0964	CG8049	2L:8268021	-	Protein	3	chr2L:8275790	CG8049	RB	intron	5	Yes	A	A
YD0964	CG8049	2L:8268021	-	Protein	3	chr2L:8275790	CG8049	RC	intron	1	No	A	
YD0964	CG8049	2L:8268021	-	Protein	3	chr2L:8275790	CG8049	RD	intron	5	Yes	A	A
YD0964	CG8049	2L:8268021	-	Protein	3	chr2L:8275790	CG8049	RE	intron	6	Yes	A	A
YD0965	CG14938	2L:11793938	-	Enhancer	3	chr2L:11805067	CG14938	RA	intron	2	No	A	
YD0965	CG14938	2L:11793938	-	Enhancer	3	chr2L:11805067	CG14938	RB	intron	2	No	A	
YD0965	CG14938	2L:11793938	-	Enhancer	3	chr2L:11805067	CG14938	RC	intron	2	No	A	
YD0965	CG14938	2L:11793938	-	Enhancer	3	chr2L:11805067	CG14938	RD	intron	2	No	A	
YD0966	CG10798	X:3132510	+	Enhancer	3	chrX:3268105	CG10798	RA	intron	1	No	A	
YD0967	CG32017	4:1161711	+	Enhancer	3	chr4:1162869						A	
YD0986	CG5352	2L:10418263	+	Enhancer	3	chr2L:10425854						A	
YD1008	CG14307	3R:14357070	-	Enhancer	3	chr3R:14357054	CG14307	RB	intron	1	No	A	
YD1008	CG14307	3R:14357070	-	Enhancer	3	chr3R:14357054	CG14307	RC	intron	1	No	A	
YD1008	CG14307	3R:14357070	-	Enhancer	3	chr3R:14357054	CG14307	RE	intron	1	No	A	
YD1008	CG14307	3R:14357070	-	Enhancer	3	chr3R:14357054	CG14307	RF	intron	1	No	A	
YD1008	CG14307	3R:14357070	-	Enhancer	3	chr3R:14357054	CG14307	RG	intron	1	No	A	
YD1008	CG14307	3R:14357070	-	Enhancer	3	chr3R:14357054	CG14307	RH	intron	1	No	A	
YD1015	CG4743	3R:21494635	-	Protein	3	chr3R:21505270	CG4743	RA	intron	3	Yes	A	B
YD1027	CG17952	2R:16764407	+	Enhancer	3	chr2R:17608361	CG17952	RA	intron	1	No	A	
YD1027	CG17952	2R:16764407	+	Enhancer	3	chr2R:17608361	CG17952	RB	exon	2	No	A	
YD1027	CG17952	2R:16764407	+	Enhancer	3	chr2R:17608361	CG17952	RC	exon	1	No	A	
YD1028	CG4807	2L:11204218	+	Enhancer	3	chr2L:11211809	CG4807	RA	exon	2	No	A	
YD1028	CG4807	2L:11204218	+	Enhancer	3	chr2L:11211809	CG4807	RB	exon	2	No	A	
YD1036	CG18362	2L:21277569	-	Protein	3	chr2L:21307825	CG18362	RA	intron	2	Yes	A	B
YD1036	CG18362	2L:21277569	-	Protein	3	chr2L:21307825	CG18362	RB	intron	2	Yes	A	B
YD1036	CG18362	2L:21277569	-	Protein	3	chr2L:21307825	CG18362	RC	intron	1	Yes	A	B
YD1038	CG4264	3R:11068662	+	Enhancer	3	chr3R:11068644	CG4264	RA	intron	1	No	A	
YD1041	CG15234	2R:1673661	+	Enhancer	3	chr2R:2500264	CG9397	RH	intron	1	No	A	
YD1041	CG15234	2R:1673661	+	Enhancer	3	chr2R:2500264	CG9397	RI	intron	1	Yes	A	B
YD1045	CG5271	2L:10400820	+	Enhancer	3	chr2L:10408411	CG5271	RA	intron	1	No	A	
YD1045	CG5271	2L:10400820	+	Enhancer	3	chr2L:10408411	CG5277	RA	intron	1	No	A	
YD1046	CG3921	2L:3792007	+	Protein	3	chr2L:3799438	CG3921	RA	intron	5	Yes	A	C
YD1047	CG4807	2L:11204218	+	Enhancer	3	chr2L:11211809	CG4807	RA	exon	2	No	A	
YD1047	CG4807	2L:11204218	+	Enhancer	3	chr2L:11211809	CG4807	RB	exon	2	No	A	
YD1050	CG31062	3R:23220890	+	Enhancer	3	chr3R:23231525						A	
YD1062	CG2125	4:75220	-	Protein	3	chr4:75220	CG2125	RA	intron	1	Yes	A	B
YD1072	CG18350	X:6836388	-	Enhancer	4	chrX:6885185						A	
YD1073	CG31529	3R:630662	-	Protein	3	chr3R:630663						A	
YD1083	CG4807	2L:11221656	+	Enhancer	3	chr2L:11232784	CG4807	RA	intron	3	No	A	
YD1083	CG4807	2L:11221656	+	Enhancer	3	chr2L:11232784	CG4807	RB	intron	3	No	A	
YD1092	unknown	2L:8992569	+	Enhancer	3	chr2L:9000338						A	
YD1093	CG33070	X:6836710	-	Protein	3	chrX:6990367	CG14425	RA	intron	1	No	A	
YD1093	CG33070	X:6836710	-	Protein	3	chrX:6990367	CG18350	RA	intron	2	No	A	
YD1093	CG33070	X:6836710	-	Protein	3	chrX:6990367	CG18350	RB	intron	1	No	A	
YD1093	CG33070	X:6836710	-	Protein	3	chrX:6990367	CG18350	RD	intron	1	No	A	
YD1093	CG33070	X:6836710	-	Protein	3	chrX:6990367	CG18350	RE	intron	2	No	A	
YD1093	CG33070	X:6836710	-	Protein	3	chrX:6990367	CG18350	RF	intron	1	No	A	
YD1093	CG33070	X:6836710	-	Protein	3	chrX:6990367	CG18350	RG	intron	2	No	A	
YD1093	CG33070	X:6836710	-	Protein	3	chrX:6990367	CG18350	RH	intron	1	No	A	
YD1093	CG33070	X:6836710	-	Protein	3	chrX:6990367	CG18350	RI	intron	1	No	A	
YD1093	CG33070	X:6836710	-	Protein	3	chrX:6990367	CG18350	RJ	intron	1	No	A	
YD1093	CG33070	X:6836710	-	Protein	3	chrX:6990367	CG18350	RK	intron	1	No	A	
YD1093	CG33070	X:6836710	-	Protein	3	chrX:6990367	CG18350	RL	intron	1	No	A	
YD1093	CG33070	X:6836710	-	Protein	3	chrX:6990367	CG18350	RM	intron	1	No	A	
YD1108	CG12052	2R:5598875	-	Enhancer	3	chr2R:6425747	CG12052	RC	intron	1	No	A	
YD1108	CG12052	2R:5598875	-	Enhancer	3	chr2R:6425747	CG12052	RG	intron	1	No	A	
YD1108	CG12052	2R:5598875	-	Enhancer	3	chr2R:6425747	CG12052	RH	intron	1	No	A	
YD1108	CG12052	2R:5598875	-	Enhancer	3	chr2R:6425747	CG12052	RJ	intron	1	No	A	
YD1108	CG12052	2R:5598875	-	Enhancer	3	chr2R:6425747	CG12052	RN	intron	1	No	A	
YD1108	CG12052	2R:5598875	-	Enhancer	3	chr2R:6425747	CG12052	RO	intron	1	No	A	
YD1108	CG12052	2R:5598875	-	Enhancer	3	chr2R:6425747	CG12052	RP	intron	1	No	A	
YD1108	CG12052	2R:5598875	-	Enhancer	3	chr2R:6425747	CG12052	RR	intron	1	No	A	
YD1108	CG12052	2R:5598875	-	Enhancer	3	chr2R:6425747	CG12052	RW	intron	1	No	A	
YD1108	CG12052	2R:5598875	-	Enhancer	3	chr2R:6425747	CG12052	RX	intron	1	No	A	
YD1108	CG12052	2R:5598875	-	Enhancer	3	chr2R:6425747	CG12052	RY	intron	1	No	A	
YD1111	CG7524	3L:4602010	-	Enhancer	3	chr3L:4624069	CG7524	RB	intron	2	No	A	
YD1111	CG7524	3L:4602010	-	Enhancer	3	chr3L:4624069	CG7524	RC	intron	1	No	A	
YD1111	CG7524	3L:4602010	-	Enhancer	3	chr3L:4624069	CG7524	RD	intron	2	No	A	
YD1111	CG7524	3L:4602010	-	Enhancer	3	chr3L:4624069	CG7524	RE	intron	2	No	A	
YD1111	CG7524	3L:4602010	-	Enhancer	3	chr3L:4624069	CG7524	RF	intron	2	No	A	
YD1127	CG3552	3L:9415973	-	Enhancer	3	chr3L:9451544						A	
YD1128	unknown	3L:19514927	+	Enhancer	4	chr3L:19542768						A	
YD1134	CG3811	2L:9515412	+	Enhancer	3	chr2L:9523183	CG3811	RA	exon	2	No	A	
YD1134	CG3811	2L:9515412	+	Enhancer	3	chr2L:9523183	CG3811	RB	exon	2	No	A	
YD1134	CG3811	2L:9515412	+	Enhancer	3	chr2L:9523183	CG3811	RC	intron	1	No	A	
YD1136	CG14206	X:19329077	+	Enhancer	3	chrX:19492150	CG14206	RB	intron	1	No	A	
YD1136	CG14206	X:19329077	+	Enhancer	3	chrX:19492150	CG14206	RC	intron	1	No	A	
YD1139	CG15234	2R:1672311	+	Enhancer	3	chr2R:2498914	CG9397	RH	intron	1	No	A	
YD1139	CG15234	2R:1672311	+	Enhancer	3	chr2R:2498914	CG9397	RI	intron	1	Yes	A	B
YD1143	CG11988	3R:4859218	-	Protein	3	chr3R:4859203	CG11988	RA	exon	1	No	A	
YD1143	CG11988	3R:4859218	-	Protein	3	chr3R:4859203	CG11988	RB	exon	1	No	A	
YD1143	CG11988	3R:4859218	-	Protein	3	chr3R:4859203	CG11988	RC	intron	1	Yes	A	A
YD1143	CG11988	3R:4859218	-	Protein	3	chr3R:4859203	CG11988	RD	intron	1	Yes	A	A
YD1154	CG3139	2L:2793304	-	Enhancer	3	chr2L:2800735						A	
YD1158	unknown	2R:4614426	+	Enhancer	4	chr2R:4990118	CG8777	RA	exon	11	Yes	A	
YD1159	CG15234	2R:1671633	+	Enhancer	3	chr2R:2498236	CG9397	RH	exon	1	No	A	
YD1159	CG15234	2R:1671633	+	Enhancer	3	chr2R:2498236	CG9397	RI	intron	1	Yes	A	B
ZCL0106	CG14478	2R:12525927	+	Enhancer	3	chr2R:13349707	CG14478	RA	exon	2	No		
ZCL0106	CG14478	2R:12525927	+	Enhancer	3	chr2R:13349707	CG14478	RB	exon	2	No		
ZCL0219	CG3161	2R:1691047	-	Protein	3	chr2R:2517650	CG3161	RA	intron	2	Yes	A	A
ZCL0219	CG3161	2R:1691047	-	Protein	3	chr2R:2517650	CG3161	RB	intron	2	Yes	A	A
ZCL0219	CG3161	2R:1691047	-	Protein	3	chr2R:2517650	CG3161	RC	intron	1	Yes	A	A
ZCL0219	CG3161	2R:1691047	-	Protein	3	chr2R:2517650	CG3161	RD	intron	2	Yes	A	A
ZCL0303	CG17273	3R:16654654	-	Protein	3	chr3R:16654637	CG17273	RA	intron	1	Yes	C	C
ZCL0345	unknown	3L:10815400	-	Protein	3	chr3L:10850971							
ZCL0361	CG1691	X:10548777	-	Protein	3	chrX:10701030	CG1691	RD	intron	2	Yes	B	B
ZCL0361	CG1691	X:10548777	-	Protein	3	chrX:10701030	CG1691	RE	intron	2	Yes	B	B
ZCL0361	CG1691	X:10548777	-	Protein	3	chrX:10701030	CG1691	RF	intron	2	Yes	B	B
ZCL0361	CG1691	X:10548777	-	Protein	3	chrX:10701030	CG1691	RG	intron	2	Yes	B	B
ZCL0361	CG1691	X:10548777	-	Protein	3	chrX:10701030	CG1691	RH	intron	3	Yes	B	B
ZCL0488	CG9539	2L:6471601	-	Protein	3	chr2L:6479385	CG9539	RA	intron	2	Yes	C	C
ZCL0505	CG2216	3R:26202366	-	Protein	3	chr3R:26213000	CG2216	RA	intron	1	Yes		A
ZCL0505	CG2216	3R:26202366	-	Protein	3	chr3R:26213000	CG2216	RB	intron	2	Yes		A
ZCL0505	CG2216	3R:26202366	-	Protein	3	chr3R:26213000	CG2216	RC	intron	2	Yes		A
ZCL0505	CG2216	3R:26202366	-	Protein	3	chr3R:26213000	CG2216	RD	intron	2	Yes		A
ZCL0505	CG2216	3R:26202366	-	Protein	3	chr3R:26213000	CG2216	RE	intron	2	Yes		A
ZCL0531	CG9894	2L:2748186	+	Protein	3	chr2L:2755617	CG9894	RA	intron	1	Yes	C	C
ZCL0531	CG9894	2L:2748186	+	Protein	3	chr2L:2755617	CG9894	RB	intron	2	Yes	C	C
ZCL0536	CG17273	3R:16654815	-	Protein	3	chr3R:16654798	CG17273	RA	intron	1	Yes	A	C
ZCL0588	CG9983	3R:24415595	+	Protein	3	chr3R:24426229	CG9983	RA	intron	1	Yes	C	C
ZCL0588	CG9983	3R:24415595	+	Protein	3	chr3R:24426229	CG9983	RB	exon	1	No	C	
ZCL0588	CG9983	3R:24415595	+	Protein	3	chr3R:24426229	CG9983	RC	exon	1	No	C	
ZCL0588	CG9983	3R:24415595	+	Protein	3	chr3R:24426229	CG9983	RD	exon	1	No	C	
ZCL0588	CG9983	3R:24415595	+	Protein	3	chr3R:24426229	CG9983	RE	intron	1	Yes	C	C
ZCL0588	CG9983	3R:24415595	+	Protein	3	chr3R:24426229	CG9983	RF	exon	1	No	C	
ZCL0613	CG4254	2R:19089604	-	Protein	3	chr2R:19933559	CG4254	RA	intron	1	Yes	C	C
ZCL0663	CG6416	3L:8594203	+	Protein	3	chr3L:8628593	CG6416	RA	intron	4	Yes	A	B
ZCL0663	CG6416	3L:8594203	+	Protein	3	chr3L:8628593	CG6416	RB	intron	5	Yes	A	B
ZCL0663	CG6416	3L:8594203	+	Protein	3	chr3L:8628593	CG6416	RE	intron	5	Yes	A	B
ZCL0663	CG6416	3L:8594203	+	Protein	3	chr3L:8628593	CG6416	RF	intron	5	Yes	A	B
ZCL0663	CG6416	3L:8594203	+	Protein	3	chr3L:8628593	CG6416	RG	intron	4	Yes	A	B
ZCL0663	CG6416	3L:8594203	+	Protein	3	chr3L:8628593	CG6416	RH	intron	4	Yes	A	B
ZCL0663	CG6416	3L:8594203	+	Protein	3	chr3L:8628593	CG6416	RI	intron	4	Yes	A	B
ZCL0663	CG6416	3L:8594203	+	Protein	3	chr3L:8628593	CG6416	RJ	intron	3	Yes	A	B
ZCL0712	unknown	X:6603449	-	Protein	3	chrX:6757106							
ZCL0722	CG4898	3R:11117284	+	Protein	3	chr3R:11117266	CG4898	RA	intron	1	Yes	C	C
ZCL0722	CG4898	3R:11117284	+	Protein	3	chr3R:11117266	CG4898	RB	intron	4	Yes	C	C
ZCL0722	CG4898	3R:11117284	+	Protein	3	chr3R:11117266	CG4898	RC	intron	1	Yes	C	C
ZCL0722	CG4898	3R:11117284	+	Protein	3	chr3R:11117266	CG4898	RD	intron	3	Yes	C	C
ZCL0722	CG4898	3R:11117284	+	Protein	3	chr3R:11117266	CG4898	RE	intron	5	Yes	C	C
ZCL0722	CG4898	3R:11117284	+	Protein	3	chr3R:11117266	CG4898	RF	intron	3	Yes	C	C
ZCL0722	CG4898	3R:11117284	+	Protein	3	chr3R:11117266	CG4898	RG	intron	3	Yes	C	C
ZCL0722	CG4898	3R:11117284	+	Protein	3	chr3R:11117266	CG4898	RH	intron	3	Yes	C	C
ZCL0722	CG4898	3R:11117284	+	Protein	3	chr3R:11117266	CG4898	RI	intron	2	Yes	C	C
ZCL0722	CG4898	3R:11117284	+	Protein	3	chr3R:11117266	CG4898	RJ	intron	3	Yes	C	C
ZCL0722	CG4898	3R:11117284	+	Protein	3	chr3R:11117266	CG4898	RK	intron	3	Yes	C	C
ZCL0722	CG4898	3R:11117284	+	Protein	3	chr3R:11117266	CG4898	RL	intron	3	Yes	C	C
ZCL0734	CG16901	3R:9471295	-	Protein	3	chr3R:9471276	CG16901	RA	intron	1	Yes		B
ZCL0734	CG16901	3R:9471295	-	Protein	3	chr3R:9471276	CG16901	RB	intron	1	Yes		B
ZCL0734	CG16901	3R:9471295	-	Protein	3	chr3R:9471276	CG16901	RC	intron	1	Yes		B
ZCL0734	CG16901	3R:9471295	-	Protein	3	chr3R:9471276	CG16901	RD	intron	1	No		
ZCL0758	CG3126	X:6531074	-	Enhancer	3	chrX:6684731	CG3126	RA	exon	2	No	A	
ZCL0758	CG3126	X:6531074	-	Enhancer	3	chrX:6684731	CG3126	RB	exon	2	No	A	
ZCL0785	CG32031	3L:9016697	-	Protein	3	chr3L:9051087	CG32031	RA	intron	3	Yes	B	B
ZCL0785	CG32031	3L:9016697	-	Protein	3	chr3L:9051087	CG32031	RB	intron	2	Yes	B	B
ZCL0785	CG32031	3L:9016697	-	Protein	3	chr3L:9051087	CG32031	RE	intron	2	Yes	B	B
ZCL0926	CG1059	3R:475689	+	Protein	3	chr3R:475690	CG1059	RA	intron	1	Yes	A	C
ZCL1000	unknown	2R:11921115	+	Protein	3	chr2R:12744895	CG5935	RA	intron	2	Yes	B	A
ZCL1000	unknown	2R:11921115	+	Protein	3	chr2R:12744895	CG5935	RB	intron	1	Yes	B	A
ZCL1000	unknown	2R:11921115	+	Protein	3	chr2R:12744895	CG5935	RC	intron	2	Yes	B	A
ZCL1000	unknown	2R:11921115	+	Protein	3	chr2R:12744895	CG5935	RD	intron	2	Yes	B	A
ZCL1408	CG32676	X:10485086	-	Enhancer	3	chrX:10638904	CG32676	RA	exon	1	No	B	
ZCL1480	CG8351	3R:4631326	+	Protein	3	chr3R:4631311	CG8351	RA	intron	4	Yes	A	A
ZCL1489	CG6603	3L:13987324	+	Protein	3	chr3L:14031544	CG6603	RA	intron	2	Yes		B
ZCL1489	CG6603	3L:13987324	+	Protein	3	chr3L:14031544	CG6603	RB	intron	2	Yes		B
ZCL1489	CG6603	3L:13987324	+	Protein	3	chr3L:14031544	CG6603	RC	intron	1	Yes		B
ZCL1502	CG17161	2L:16668607	-	Protein	3	chr2L:16690523							B
ZCL1514	CG6988	3L:15091036	-	Protein	3	chr3L:15135257	CG6988	RA	intron	1	Yes	A	A
ZCL1514	CG6988	3L:15091036	-	Protein	3	chr3L:15135257	CG6988	RB	intron	1	Yes	A	B
ZCL1537	CG4254	2R:19089572	-	Protein	3	chr2R:19933527	CG4254	RA	intron	1	Yes	C	C
ZCL1597	unknown	X:18544184	-	Protein	3	chrX:18707259							B
ZCL1605	CG8421	2R:11174813	+	Protein	3	chr2R:11998593	CG8421	RA	intron	1	Yes	A	A
ZCL1605	CG8421	2R:11174813	+	Protein	3	chr2R:11998593	CG8421	RB	intron	1	Yes	A	A
ZCL1605	CG8421	2R:11174813	+	Protein	3	chr2R:11998593	CG8421	RD	intron	1	Yes	A	A
ZCL1605	CG8421	2R:11174813	+	Protein	3	chr2R:11998593	CG8421	RE	intron	1	Yes	A	A
ZCL1614	CG3735	2R:18983267	-	Enhancer	3	chr2R:19827222	CG3735	RA	exon	1	No	C	
ZCL1626	CG2621	X:2399388	+	Protein	3	chrX:2536649	CG2621	RA	intron	2	Yes	A	A
ZCL1626	CG2621	X:2399388	+	Protein	3	chrX:2536649	CG2621	RB	intron	2	Yes	A	A
ZCL1626	CG2621	X:2399388	+	Protein	3	chrX:2536649	CG2621	RC	intron	2	Yes	A	A
ZCL1626	CG2621	X:2399388	+	Protein	3	chrX:2536649	CG2621	RE	intron	2	Yes	A	A
ZCL1626	CG2621	X:2399388	+	Protein	3	chrX:2536649	CG2621	RF	intron	2	Yes	A	A
ZCL1626	CG2621	X:2399388	+	Protein	3	chrX:2536649	CG2621	RH	intron	2	Yes	A	A
ZCL1626	CG2621	X:2399388	+	Protein	3	chrX:2536649	CG2621	RI	intron	3	Yes	A	A
ZCL1626	CG2621	X:2399388	+	Protein	3	chrX:2536649	CG2621	RJ	intron	4	Yes	A	A
ZCL1636	unknown	X:2052873	+	Protein	3	chrX:2190134							C
ZCL1649	CG9261	2L:6785965	-	Protein	3	chr2L:6793749	CG9261	RA	intron	1	No	A	
ZCL1649	CG9261	2L:6785965	-	Protein	3	chr2L:6793749	CG9261	RC	intron	3	Yes	A	A
ZCL1649	CG9261	2L:6785965	-	Protein	3	chr2L:6793749	CG9261	RD	intron	1	No	A	
ZCL1649	CG9261	2L:6785965	-	Protein	3	chr2L:6793749	CG9261	RE	intron	1	No	A	
ZCL1649	CG9261	2L:6785965	-	Protein	3	chr2L:6793749	CG9261	RF	intron	1	Yes	A	A
ZCL1696	CG2207	2L:21461965	-	Protein	3	chr2L:21628844	CG2207	RA	intron	1	Yes	B	B
ZCL1696	CG2207	2L:21461965	-	Protein	3	chr2L:21628844	CG2207	RB	intron	2	Yes	B	B
ZCL1696	CG2207	2L:21461965	-	Protein	3	chr2L:21628844	CG2207	RF	intron	1	Yes	B	B
ZCL1700	CG7981	X:2274854	-	Protein	3	chrX:2412115	CG33950	RF	intron	7	Yes	C	A
ZCL1871	CG6783	3R:7392603	-	Protein	4	chr3R:7392603	CG6782	RD	intron	1	No	A	
ZCL1871	CG6783	3R:7392603	-	Protein	4	chr3R:7392603	CG6783	RA	intron	1	No	A	
ZCL1871	CG6783	3R:7392603	-	Protein	4	chr3R:7392603	CG6783	RB	intron	1	Yes	A	A
ZCL1871	CG6783	3R:7392603	-	Protein	4	chr3R:7392603	CG6783	RC	intron	1	Yes	A	A
ZCL1884	CG9042	2L:5936170	-	Protein	3	chr2L:5943955							
ZCL1909	CG4898	3R:11117133	-	Protein	3	chr3R:11117115							B
ZCL1911	CG9748	3R:4484708	-	Protein	3	chr3R:4484693	CG9748	RA	intron	1	Yes	C	C
ZCL1912	CG2621	X:2399229	+	Protein	3	chrX:2536490	CG2621	RA	intron	2	Yes	A	A
ZCL1912	CG2621	X:2399229	+	Protein	3	chrX:2536490	CG2621	RB	intron	2	Yes	A	A
ZCL1912	CG2621	X:2399229	+	Protein	3	chrX:2536490	CG2621	RC	intron	2	Yes	A	A
ZCL1912	CG2621	X:2399229	+	Protein	3	chrX:2536490	CG2621	RE	intron	2	Yes	A	A
ZCL1912	CG2621	X:2399229	+	Protein	3	chrX:2536490	CG2621	RF	intron	2	Yes	A	A
ZCL1912	CG2621	X:2399229	+	Protein	3	chrX:2536490	CG2621	RH	intron	2	Yes	A	A
ZCL1912	CG2621	X:2399229	+	Protein	3	chrX:2536490	CG2621	RI	intron	3	Yes	A	A
ZCL1912	CG2621	X:2399229	+	Protein	3	chrX:2536490	CG2621	RJ	intron	4	Yes	A	A
ZCL1943	CG1104	3R:2901124	-	Protein?	3	chr3R:2901123							C
ZCL1957	CG8416	2R:11168091	+	Protein	3	chr2R:11991871	CG8416	RA	intron	2	Yes	C	C
ZCL1957	CG8416	2R:11168091	+	Protein	3	chr2R:11991871	CG8416	RB	intron	2	Yes	C	C
ZCL1957	CG8416	2R:11168091	+	Protein	3	chr2R:11991871	CG8416	RC	intron	2	Yes	C	C
ZCL1957	CG8416	2R:11168091	+	Protein	3	chr2R:11991871	CG8416	RD	intron	1	Yes	C	C
ZCL1957	CG8416	2R:11168091	+	Protein	3	chr2R:11991871	CG8416	RE	intron	2	Yes	C	C
ZCL1957	CG8416	2R:11168091	+	Protein	3	chr2R:11991871	CG8416	RF	intron	2	Yes	C	C
ZCL1957	CG8416	2R:11168091	+	Protein	3	chr2R:11991871	CG8416	RG	intron	2	Yes	C	C
ZCL1959	CG31782	2L:16698061	-	Protein	3	chr2L:16719977	CG31782	RA	intron	2	Yes	B	A
ZCL1959	CG31782	2L:16698061	-	Protein	3	chr2L:16719977	CG31782	RB	intron	2	Yes	B	A
ZCL1973	CG7981	X:2274463	-	Protein	3	chrX:2411724	CG33950	RF	intron	7	Yes	A	A
ZCL2020	CG2163	2R:3193023	+	Protein	3	chr2R:4019781	CG2163	RA	intron	2	Yes	C	C
ZCL2020	CG2163	2R:3193023	+	Protein	3	chr2R:4019781	CG2163	RB	intron	2	Yes	C	C
ZCL2060	CG11140	2R:2534939	-	Protein	3	chr2R:3361543	CG11140	RA	exon	1	No	B	
ZCL2060	CG11140	2R:2534939	-	Protein	3	chr2R:3361543	CG11140	RB	exon	1	No	B	
ZCL2060	CG11140	2R:2534939	-	Protein	3	chr2R:3361543	CG11140	RC	intron	1	No	B	
ZCL2060	CG11140	2R:2534939	-	Protein	3	chr2R:3361543	CG11140	RD	exon	1	No	B	
ZCL2060	CG11140	2R:2534939	-	Protein	3	chr2R:3361543	CG11140	RE	intron	1	No	B	
ZCL2060	CG11140	2R:2534939	-	Protein	3	chr2R:3361543	CG11140	RF	intron	3	Yes	B	A
ZCL2060	CG11140	2R:2534939	-	Protein	3	chr2R:3361543	CG11140	RG	intron	3	Yes	B	A
ZCL2060	CG11140	2R:2534939	-	Protein	3	chr2R:3361543	CG11140	RH	intron	3	Yes	B	A
ZCL2060	CG11140	2R:2534939	-	Protein	3	chr2R:3361543	CG11140	RI	exon	1	No	B	
ZCL2071	CG3161	2R:1692929	-	Protein	3	chr2R:2519532	CG3161	RA	exon	2	Yes	A	
ZCL2071	CG3161	2R:1692929	-	Protein	3	chr2R:2519532	CG3161	RB	exon	2	Yes	A	
ZCL2071	CG3161	2R:1692929	-	Protein	3	chr2R:2519532	CG3161	RC	exon	1	Yes	A	
ZCL2071	CG3161	2R:1692929	-	Protein	3	chr2R:2519532	CG3161	RD	exon	2	Yes	A	
ZCL2129	CG31363	3R:7430729	-	Protein	3	chr3R:7430711	CG31363	RA	intron	1	Yes	C	B
ZCL2129	CG31363	3R:7430729	-	Protein	3	chr3R:7430711	CG31363	RD	intron	1	Yes	C	B
ZCL2129	CG31363	3R:7430729	-	Protein	3	chr3R:7430711	CG31363	RH	intron	1	Yes	C	B
ZCL2144	CG1915	3L:2087688	-	Protein	3	chr3L:2107059	CG1915	RA	intron	2	Yes	A	A
ZCL2144	CG1915	3L:2087688	-	Protein	3	chr3L:2107059	CG1915	RC	intron	2	Yes	A	A
ZCL2183	CG31363	3R:7430662	-	Protein	3	chr3R:7430644	CG31363	RA	intron	1	Yes		B
ZCL2183	CG31363	3R:7430662	-	Protein	3	chr3R:7430644	CG31363	RD	intron	1	Yes		B
ZCL2183	CG31363	3R:7430662	-	Protein	3	chr3R:7430644	CG31363	RH	intron	1	Yes		B
ZCL2191	unknown	3L:10815400	-	Protein	3	chr3L:10850971							
ZCL2191	unknown	3L:10815400	-	Protein	3	chr3L:10850971							C
ZCL2207	CG5670	3R:16783372	+	Protein	3	chr3R:16783355	CG5670	RA	intron	1	Yes	C	C
ZCL2207	CG5670	3R:16783372	+	Protein	3	chr3R:16783355	CG5670	RC	intron	1	No	C	
ZCL2207	CG5670	3R:16783372	+	Protein	3	chr3R:16783355	CG5670	RF	intron	1	No	C	
ZCL2207	CG5670	3R:16783372	+	Protein	3	chr3R:16783355	CG5670	RG			No	C	
ZCL2253	CG5920	2L:9889746	+	Protein	3	chr2L:9897517							B
ZCL2334	CG2163	2R:3192928	-	Protein	3	chr2R:4019686							
ZCL2393	CG4254	2R:19089359	-	Protein	3	chr2R:19933314	CG4254	RA	intron	1	Yes	A	C
ZCL2496	CG14066	3R:24141347	-	Protein?	3	chr3R:24151981	CG14066	RA	exon	1	No		
ZCL2496	CG14066	3R:24141347	-	Protein?	3	chr3R:24151981	CG14066	RB	intron	1	No		
ZCL2496	CG14066	3R:24141347	-	Protein?	3	chr3R:24151981	CG14066	RC	intron	1	No		
ZCL2577	CG8472	2R:7326121	-	Protein?	3	chr2R:8148913						B	
ZCL2595	CG3125	X:5487247	+	Protein?	4	chrX:5536043							
ZCL2696	CG9748	3R:4484639	-	Protein	3	chr3R:4484624	CG9748	RA	intron	1	Yes	C	C
ZCL2713	CG8369	3R:4646424	+	Enhancer	3	chr3R:4646409						B	
ZCL2760	CG9894	2L:2754379	+	Protein	3	chr2L:2761810	CG2848	RA	exon	4	Yes	C	
ZCL2762	unknown	3R:4638329	+	Protein	3	chr3R:4638314						B	
ZCL2802	unknown	2R:13420840	+	Protein	3	chr2R:14244605							
ZCL2809	CG15309	X:9952396	-	Enhancer	3	chrX:10106521							
ZCL2809	CG15309	X:9952396	-	Enhancer	3	chrX:10106521						B	
ZCL2810	CG18497	2L:161811	-	Enhancer	3	chr2L:161811						B	
ZCL2825	unknown	3R:9639887	-	Enhancer	3	chr3R:9639868						B	
ZCL2826	unknown	3R:9639890	-	Enhancer	3	chr3R:9639871						B	
ZCL2830	CG7958	3L:10831818	-	Enhancer	4	chr3L:10850971						C	
ZCL2856	CG10927	2R:13676958	+	Protein	3	chr2R:14500743	CG10927	RA	exon	1	Yes	B	
ZCL2857	unknown	2R:13420839	+	Protein	3	chr2R:14244604						B	
ZCL2860	unknown	2R:11892441	-	Protein	3	chr2R:12716221						B	
ZCL2879	CG15862	2R:5086399	-	Enhancer	3	chr2R:5913271	CG15862	R2-RA	intron	1	No	B	
ZCL2879	CG15862	2R:5086399	-	Enhancer	3	chr2R:5913271	CG15862	R2-RB	intron	1	No	B	
ZCL2879	CG15862	2R:5086399	-	Enhancer	3	chr2R:5913271	CG15862	R2-RD	intron	1	No	B	
ZCL2879	CG15862	2R:5086399	-	Enhancer	3	chr2R:5913271	CG15862	R2-RE	intron	1	No	B	
ZCL2897	CG15309	X:9952396	-	Enhancer	3	chrX:10106521						C	
ZCL2897	CG15309	X:9952396	-	Enhancer	3	chrX:10106521						C	
ZCL2898	CG3125	X:5487247	+	Enhancer	4	chrX:5536043						C	
ZCL2903	CG9261	2L:6784334	-	Protein	3	chr2L:6792118	CG9261	RA	intron	2	Yes	A	A
ZCL2903	CG9261	2L:6784334	-	Protein	3	chr2L:6792118	CG9261	RC	intron	3	Yes	A	A
ZCL2903	CG9261	2L:6784334	-	Protein	3	chr2L:6792118	CG9261	RD	intron	2	Yes	A	A
ZCL2903	CG9261	2L:6784334	-	Protein	3	chr2L:6792118	CG9261	RE	intron	2	Yes	A	A
ZCL2903	CG9261	2L:6784334	-	Protein	3	chr2L:6792118	CG9261	RF	intron	1	Yes	A	A
ZCL2918	CG5848	2L:16303752	+	Protein	3	chr2L:16325668						A	
ZCL2926	CG3523	2L:3049199	-	Protein	3	chr2L:3056630						B	
ZCL2947	CG9553	2L:5973176	+	Protein	3	chr2L:5980961						B	
ZCL2956	CG3161	2R:1692471	-	Protein	3	chr2R:2519074	CG3161	RA	intron	2	Yes	A	A
ZCL2956	CG3161	2R:1692471	-	Protein	3	chr2R:2519074	CG3161	RB	intron	2	Yes	A	A
ZCL2956	CG3161	2R:1692471	-	Protein	3	chr2R:2519074	CG3161	RC	intron	1	Yes	A	A
ZCL2956	CG3161	2R:1692471	-	Protein	3	chr2R:2519074	CG3161	RD	intron	2	Yes	A	A
ZCL2984	CG30425	2R:19947471	-	Enhancer	4	chr2R:20327394						B	
ZCL2988	CG8472	2R:7325951	+	Protein	3	chr2R:8148743	CG8472	RA	intron	2	Yes		C
ZCL3012	CG10927	2R:13677023	+	Protein	3	chr2R:14500808	CG10927	RA	exon	1	Yes		B	
ZCL3063	CG15862	2R:5086399	-	Enhancer	3	chr2R:5913271	CG15862	R2-RA	intron	1	No	B	
ZCL3063	CG15862	2R:5086399	-	Enhancer	3	chr2R:5913271	CG15862	R2-RB	intron	1	No	B	
ZCL3063	CG15862	2R:5086399	-	Enhancer	3	chr2R:5913271	CG15862	R2-RD	intron	1	No	B	
ZCL3063	CG15862	2R:5086399	-	Enhancer	3	chr2R:5913271	CG15862	R2-RE	intron	1	No	B	
ZCL3111	CG10504	3L:21134646	+	Protein	3	chr3L:21210470	CG10504	RA	intron	1	Yes	B	B
ZCL3141	CG1691	X:10550499	-	Protein	3	chrX:10702752	CG1691	RD	intron	2	Yes	B	B
ZCL3141	CG1691	X:10550499	-	Protein	3	chrX:10702752	CG1691	RE	intron	2	Yes	B	B
ZCL3141	CG1691	X:10550499	-	Protein	3	chrX:10702752	CG1691	RF	intron	2	Yes	B	B
ZCL3141	CG1691	X:10550499	-	Protein	3	chrX:10702752	CG1691	RG	intron	2	Yes	B	B
ZCL3141	CG1691	X:10550499	-	Protein	3	chrX:10702752	CG1691	RH	intron	3	Yes	B	B
ZCL3169	CG14648	3R:229449	+	Protein	3	chr3R:229450	CG14648	RA	intron	1	Yes	A	A
ZCL3169	CG14648	3R:229449	+	Protein	3	chr3R:229450	CG14648	RB	intron	1	Yes	A	A
ZCL3170	CG5920	2L:9889689	-	Protein	3	chr2L:9897460	CG5920	RA	intron	1	No	B	
ZCL3178	CG2163	2R:3192930	+	Protein	3	chr2R:4019688	CG2163	RA	intron	2	Yes	A	C
ZCL3178	CG2163	2R:3192930	+	Protein	3	chr2R:4019688	CG2163	RB	intron	2	Yes	A	C
ZCL3192	CG10504	3L:21134646	+	Protein	3	chr3L:21210470	CG10504	RA	intron	1	Yes	B	B
ZCL3245	CG9884	2L:2487050	+	Protein	3	chr2L:2494483	CG9884	RA	intron	1	Yes	B	C
ZCL3245	CG9884	2L:2487050	+	Protein	3	chr2L:2494483	CG9884	RB	intron	1	Yes	B	C
ZCL3245	CG9884	2L:2487050	+	Protein	3	chr2L:2494483	CG9884	RC	intron	1	Yes	B	C
ZCL3245	CG9884	2L:2487050	+	Protein	3	chr2L:2494483	CG9884	RD	intron	1	Yes	B	C
ZCL3377	CG17870	2R:5161645	+	Enhancer	3	chr2R:5988517	CG17870	RB	intron	1	No	B	
ZCL3377	CG17870	2R:5161645	+	Enhancer	3	chr2R:5988517	CG17870	RE	intron	1	No	B	
ZCL3377	CG17870	2R:5161645	+	Enhancer	3	chr2R:5988517	CG17870	RF	intron	1	No	B	
ZCL3377	CG17870	2R:5161645	+	Enhancer	3	chr2R:5988517	CG17870	RH	intron	1	No	B	
ZCL3436	CG7795	2L:8312129	+	Enhancer	3	chr2L:8319898						C	
ZCL3437	unknown	2R:11921058	+	Protein	3	chr2R:12744838	CG5935	RA	intron	2	Yes	B	A
ZCL3437	unknown	2R:11921058	+	Protein	3	chr2R:12744838	CG5935	RB	intron	1	Yes	B	A
ZCL3437	unknown	2R:11921058	+	Protein	3	chr2R:12744838	CG5935	RC	intron	2	Yes	B	A
ZCL3437	unknown	2R:11921058	+	Protein	3	chr2R:12744838	CG5935	RD	intron	2	Yes	B	A
ZCL3466	CG17323	2L:18801582	+	Enhancer	3	chr2L:18823499