Gene.Summary *** translation start/stop [ alternative (alt.) splice ] alt. splice ^ intron opposite strand nucleotide positions indicated within parentheses abundance estimate according to number of transcript sequences at http://www.ncbi.nlm.nih.gov -------------------------------------------------------------------------------- 1. Caenorhabditis Chromosome 5 Size >4.5 Kb No transcripts Derived from similarity to other syts Does not agree with Wormbase gene prediction Y75B7AL.3 http://www.wormbase.org MIRVANTYMKQCAFHLKKFQWKPIISFCDYFARKSVIRFLPLICNF^ ILTFLCFVLCFYLPIVIFLAVFEL^ IIVIELCHFFHYSVSLCWCTNDFLCSMSVSKKKDEDKEKKFLGRLQYKLDYDFDKNS^ LTVVIIQAEELPAMDLGGTSDPYVKLFLLPDKKKKLQTKVQRKSLNPVFNESFTFK^ IPFNEIGGQTLVLNVFDFDRFGKHDQ^ IGQISIPLGKVDLAATLERTDLIESPPENRLGEVCLALRYVPNKNKLSVVVMECKNLKKM DVLGLSDPYVKIYLMMGTKRLEKKKTTIKMKTLNPYYNESFSFDVTSEKMQ^ RVHLHVTVSDYDRVGSNERIGQ^ VIIGTCATGVALKQWNDMLATPRRSVAQWHTLVPFNDD - ATGATACGTGTTGCAAATACGTATATGAAGCAATGTGCTTTTCATCTTAAAAAGTTTCAGTGGAA *** ACCGATAATTAGTTTCTGTGATTATTTTGCTAGAAAATCAGTTATTAGATTTCTACCTTTGATTT GCAATTTTA phase +1 AC024869.1 (36862-36724) - TACTGACGTTTCTGTGTTTCGTTTTGTGTTTTTATCTTCCAATTGTAATATTTCTTGCGGTTTTT GAGTTGA phase +1 AC024869.1 (35787-35716) - TCATTGTAATTGAACTTTGCCACTTTTTTCATTATTCAGTGAGCTTATGTTGGTGTACTAATGAT TTTCTTTGCAGTATGTCAGTGTCCAAAAAGAAAGACGAGGACAAGGAGAAAAAGTTCCTCGGTCG TCTACAATACAAACTTGATTATGATTTTGATAAAAACTCG phase 0 AC024869.1 (35156-34987) - CTCACGGTGGTAATTATTCAAGCCGAAGAGTTACCTGCCATGGATCTGGGTGGTACCTCGGATCC CTACGTGAAACTTTTTCTGCTTCCCGACAAAAAGAAGAAGCTTCAGACAAAAGTACAGAGAAAGT CGTTGAATCCGGTTTTTAACGAGAGTTTCACATTTAAA phase 0 AC024869.1 (34932-34765) - ATTCCGTTCAATGAAATTGGAGGTCAAACTTTGGTTCTTAATGTGTTCGATTTTGATCGATTTGG AAAACATGACCAG phase 0 AC024869.1 (34709-34632) - ATTGGCCAAATTTCAATTCCCTTGGGAAAAGTGGATCTAGCCGCAACACTCGAACGAACCGATTT AATAGAATCCCCGCCAGAAAATCGGCTTGGAGAAGTTTGTCTCGCCCTTAGATACGTGCCAAACA AGAACAAGCTGTCTGTGGTAGTAATGGAGTGCAAAAATCTGAAAAAAATGGACGTGCTTGGCTTA TCAGATCCGTATGTCAAGATATATTTGATGATGGGCACTAAACGACTGGAGAAGAAAAAGACGAC AATCAAGATGAAGACGTTGAATCCGTATTATAACGAATCATTCAGTTTTGATGTTACTTCGGAAA AAATGCAG phase 0 AC024869.1 (34215-33883) - CGAGTCCACCTTCATGTGACGGTATCCGATTACGATAGAGTTGGTTCCAATGAACGAATTGGACAG phase 0 AC024869.1 (33013-32948) - GTAATTATTGGAACATGTGCCACGGGCGTGGCTTTAAAACAATGGAATGACATGTTAGCAACCCC AAGACGATCAGTTGCTCAATGGCATACTCTAGTTCCTTTCAATGATGATTAG *** AC024869.1 (32445-32329) -------------------------------------------------------------------------------- 2. Caenorhabditis Chromosome 5 Size >18.5 Kb Agrees with Wormbase gene prediction R12A1.2 Transcript complexity affecting C2B MDEWWWWVLVAILSLCAVILSSCALYFGARICVRQIKRKVKYS^ EVPTSVPEIKVSVPQSASTLSIS^ KMNGSYRARVLSRNGCSPPWMDRNFETSTRSSPCTSPAIAS^ TSDSCELLGDDPRSASSMRNSMFLFNVDGNPEVIDE^ MEDIDERSVMHYELGFYDKTDGGCIRGTLTFALRYDFIH^ RVLMLHVIRANNLPVEDKGVTVDPYVKMYLLPERRGHCKTRICKKTNDPEFNEMFSFDVS FNNLANRMLQ^ FTVYDFDRFTRHGLIGNIIMRDLFEKSDLYTWTEYTMHIVASQNKNDYGDLLLFLTYSNQ EEKLYINVSKAYNLRPMDITGAS^ DPYVKIEQTFNGKRFKSKKSSTKRANLNPVFHETLVFDIPSSQIAETNILIQVMDWD^ RIGKDDLLGCCILGKDSPTADGKTQWDNCLNA[VPEEGQL^ KNKPVGQWHSLLSEVPEAFKNMPKAKK - AGGCAAAATTGTTGAACTACCTTATCAAGGAGAACTTTCGTCTTCTTCGAATCACCCGAATGGAC *** GAATGGTGGTGGTGGGTTCTGGTGGCGATTCTTTCGCTATGTGCGGTGATTTTGAGCTCTTGTGC TCTGTATTTTGGAGCGAGGATATGTGTTCGACAGATCAAAAGGAAAGTCAAATATTCAG phase +1 AF016680.2 (20027-19839) - AAGTACCAACGTCGGTGCCCGAGATCAAAGTCAGTGTGCCGCAGAGTGCATCCACCCTGTCCATC AGCA phase +1 AF016680.2 (15339-15271) - AAATGAATGGATCGTACCGGGCGAGGGTGCTCAGCAGAAACGGATGCTCGCCGCCTTGGATGGAT CGAAATTTCGAAACATCTACCAGGAGCTCGCCGTGCACGTCTCCAGCCATCGCCTCAAC phase +2 AF016680.2 (11174-11051) - ATCTGACAGCTGTGAACTTTTGGGTGATGATCCACGGTCCGCATCTTCTATGCGAAATTCAATGT TTTTGTTTAATGTCGATGGAAACCCCGAGGTTATAGATGAG phase 0 AF016680.2 (5644-5539) - ATGGAGGATATCGACGAACGATCTGTGATGCATTATGAGCTGGGGTTCTACGATAAAACCGATGG AGGTTGCATTCGGGGAACGCTCACTTTTGCGCTTAGATATGATTTTATTCATAG phase +2 AF016680.2 (4510-4392) - GGTACTAATGTTACATGTAATTCGCGCCAACAATCTTCCAGTAGAAGACAAGGGTGTCACGGTGG ATCCATACGTGAAAATGTACTTGTTACCGGAGCGACGAGGGCATTGTAAAACGAGAATATGTAAA AAGACGAATGATCCGGAATTTAATGAAATGTTCTCCTTTGATGTTTCTTTTAATAATTTGGCAAA TAGGATGCTTCAA phase 0 AF016680.2 (4334-4127) - TTCACGGTCTACGATTTCGATCGGTTCACCCGCCACGGACTCATTGGAAACATCATAATGCGAGA TCTTTTCGAAAAGTCCGATCTTTACACGTGGACAGAATATACAATGCATATTGTTGCAAGTCAAA ACAAGAACGATTACGGTGATTTGTTACTTTTTTTGACCTACTCGAATCAAGAGGAGAAGCTGTAT ATCAACGTGTCAAAAGCTTATAATTTAAGGCCAATGGATATAACGGGTGCTTCAG phase +1 AF016680.2 (3657-3408) - ATCCATATGTGAAAATCGAGCAAACTTTTAACGGGAAACGGTTCAAATCGAAAAAATCTTCAACA AAACGAGCGAATTTGAATCCAGTGTTCCACGAGACCCTTGTGTTTGATATCCCTTCATCTCAAAT TGCGGAAACCAATATTTTAATTCAGGTTATGGACTGGGATAG phase +2 AF016680.2 (3360-3189) - AATAGGAAAAGATGATCTTCTTGGTTGCTGTATTTTGGGCAAAGATAGTCCGACTGCTGATGGTA AAACTCAATGGGACAACTGTCTTAATGCG[GTGCCCGAAGAGGGGCAGCTG phase 0 AF016680.2 (3138-3045/3024) - AAAAACAAACCAGTTGGTCAATGGCACAGCCTACTCTCCGAGGTTCCTGAGGCTTTCAAAAACAT GCCGAAAGCCAAAAAATAAAAATTTCTCTTATTCCTCACAAATGATTCTCTGTGATTCAAAACCG *** GTTGTCATATCTCTCTAGATCGTGATTAGTTGAAATTTCAAATTAACCACGAGCAAATTCGTTTT AATTTCAAAAATTGTAGCTTGTTTCAAGTTGAAACCCTTATTTGGAAATCCTTCAAAATATTTCC CTATTTCTCAATTGTTCCACCTCTTGCAGATCTTATCAGCTTTATATGTATTTATAATGAAAATT AF016680.2 (1858-1534) -------------------------------------------------------------------------------- 3. Caenorhabditis Chromosome 3 Size >7.9 Kb Does not agree with Wormbase gene predictions B0412.5 and F42G9.7 MWATGAIVCSPVFRILSTCCPIRRGVPTSNG^ YHPRPKHVDIGNGAVPILSSKPITVQPTNSDYYEPVNNGTLPLSSSGALIKQYGNIHFRVEYDFEQSK^ LSVTIVSASDLPAMDRNGMSDPYVKVYVLPERKQKFETRIIRNTLNPTYNETFQFS^ IPFNELHSKTLMLVVYDYDRLSKDDKMGQLSVPLESIDFGITTDIERPLQKPEKDDE^ KECRLGDICFSTRYRPATGTVTLTIMEARNLKKMDVGGSS^ DPYVKIYLHHGRKLLSKKKTSRKYKTLNPYYNESFQFKIEPHMIE^ KVHLIVSVWDYDKMSKNDFIGEVTLGSKHLNLPQ^ ITHACSEQWAEMMTSRRPVVQWHTLQERMEKEKKKDDD - TTTTTGTGCTCCAAAATTTTTTCAGACAAAAAAATTCGAAAAATCTGAAATTTAATTATATTATT CACGATTTTCGTACTATGTAGCGAGAAAACACCCTAGAAACTCACTATTTTAACTATTTTTCCCC GTTTTTTTATTTCACTGATAACATTTTCTCACTGATACCGCCACAATCAATTATTCAACCATGTG *** GGCGACCGGAGCAATCGTCTGCTCGCCAGTATTCCGGATTTTGTCGACGTGTTGTCCGATTCGTC GTGGCGTGCCAACGTCGAATGGG phase 0 U80953.1 (4769-4487) - TACCACCCTCGCCCAAAACACGTGGACATTGGAAATGGCGCCGTACCAATTCTATCGTCAAAACC CATCACTGTACAGCCTACAAACAGCGACTACTACGAACCAGTTAACAATGGAACACTTCCTTTGT CTTCAAGTGGTGCCCTTATAAAGCAGTATGGAAATATTCACTTCCGAGTTGAATATGACTTTGAG CAATCCAAG phase +2 U80953.1 (1226-1023) - CTCTCCGTGACTATCGTCAGTGCTTCTGATTTACCCGCAATGGACCGGAATGGGATGTCAGACCC TTATGTTAAGGTGTACGTTCTGCCAGAGAGAAAACAGAAATTTGAAACCAGAATCATCAGAAACA CACTGAATCCCACATATAATGAAACGTTCCAATTTTCA phase 0 U00051.1 (33877-33710) - ATCCCGTTCAACGAGCTCCACTCAAAAACTCTCATGTTGGTGGTATATGACTATGACCGATTATC GAAGGACGATAAGATGGGTCAACTGTCCGTGCCACTGGAGTCAATTGATTTTGGAATTACTACTG ATATCGAACGACCTCTTCAGAAGCCCGAGAAAGACGATGAG phase 0 U00051.1 (33667-33497) - AAAGAATGCCGACTCGGTGATATTTGCTTCTCCACTCGGTACCGACCTGCAACCGGTACAGTAAC CCTTACGATCATGGAGGCCAGGAATTTGAAAAAGATGGATGTTGGTGGTTCTTCAG phase +1 U00051.1 (32513-32393) - ATCCATACGTAAAAATCTACTTACACCACGGACGAAAGCTGTTAAGTAAGAAAAAGACGTCGAGA AAGTACAAAACCCTGAATCCCTACTACAATGAGAGTTTCCAATTCAAAATTGAGCCACATATGAT TGAG phase 0 U00051.1 (31786-31653) - AAAGTTCATCTGATTGTGTCCGTCTGGGATTATGACAAGATGAGCAAGAACGACTTTATCGGAGA GGTGACGTTGGGCTCCAAGCATTTGAATTTACCGCAG phase 0 U00051.1 (31606-31505) - ATCACCCACGCGTGCAGCGAACAGTGGGCTGAAATGATGACGTCACGGAGGCCTGTAGTTCAGTG GCATACGTTACAAGAACGGATGGAAAAGGAGAAAAAGAAGGATGATGACTAA *** U00051.1 (31000-30884) -------------------------------------------------------------------------------- 4. Caenorhabditis syt1 Cesyt1 Chromosome 2 Size >5.5Kb Agrees with Wormbase gene prediction F31E8.2 Transcript complexity affecting C2B MVKLDFSSQDEENDEDLTKEFVRDEAPMEETTSEAVKQ^ IATTTKETLKDVVVNKVIDVKDVVKEKVMQQTG^ MPEWAFVFLGFVFILLVLACAFCLIRKLFGKKRHGEKNKKGGLKGFFGKGQDVVDGKNIQG^ MAQDLEELGDAMEQNEKEQAEEKEEVKLGRIQYKLDYDFQQGQLTVTVIQAEDLPGMDMS GTSDPYVKLYLLPEKKKKVETKVHRKTLNPVFNETFIFKVAFNEITAKTLVFAIYDFDRF SKHDQIGQVLIPLGKIDLGAVIEEWKDIAPPPDDKEA^ EKSLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLS^ [DPYVKLEMFGEDRKRLKKKKTNIKRKTLNPYFNESFVFDKLPLHKMK^] DPYVKIVLMQGGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQ^ KVSLMITVMDYDKLGSNDAIGRCLLGCNGTGAEL^ RHWMDMLASPRRPIAQWHTLGPVEEEGDKKDDKK SL1 leader - TCACCATGGTGAAATTAGACTTTTCGTCGCAAGACGAAGAGAACGACGAAGACTTGACAAAAGAG *** TTTGTAAGGGATGAAGCACCAATGGAAGAAACAACATCGGAAGCAGTAAAGCAAAT phase +2 U55856.1 13803-13923 - AGCAACAACGACAAAGGAGACGCTGAAAGATGTGGTTGTAAATAAAGTGATTGATGTGAAAGACG TTGTGAAAGAAAAGGTTATGCAACAAACTGGGA phase +1 U55856.1 14729-14826 - TGCCTGAATGGGCGTTCGTATTTCTTGGATTCGTATTTATTCTGCTGGTTCTCGCGTGTGCATTC TGTCTCATTCGGAAGTTATTTGGAAAAAAGCGGCATGGTGAGAAGAACAAAAAGGGTGGATTGAA AGGATTCTTTGGTAAAGGACAGGATGTCGTTGATGGAAAAAATATTCAAGGG phase 0 U55856.1 15923-16104 - ATGGCTCAAGACTTGGAAGAACTTGGTGATGCGATGGAACAAAATGAAAAAGAACAAGCTGAAGA AAAAGAAGAAGTGAAACTTGGAAGGATACAATATAAACTTGATTATGATTTCCAACAAGGTCAAC TAACTGTAACTGTAATTCAAGCAGAAGATTTACCAGGAATGGACATGTCAGGAACATCAGATCCA TATGTAAAATTGTATTTGTTACCGGAGAAAAAGAAGAAGGTTGAGACGAAAGTACATCGAAAAAC TCTTAATCCAGTATTCAATGAGACATTCATTTTTAAAGTCGCTTTCAACGAAATTACGGCAAAAA CTCTTGTCTTTGCAATTTATGATTTCGATCGGTTCAGTAAGCACGATCAAATCGGACAAGTTCTC ATTCCGCTTGGAAAAATTGATTTGGGAGCTGTTATCGAAGAATGGAAGGATATTGCACCACCACC AGATGACAAAGAAGCT phase 0 U55856.1 16931-17401 - GAGAAGAGTCTTGGTGACATTTGCTTCTCACTTCGGTACGTCCCAACTGCTGGTAAATTGACAGT GGTCATTCTGGAAGCAAAAAATCTTAAGAAAATGGACGTCGGTGGTTTATCAG phase +1 U55856.1 17700-17817 - alt. C2B exon either skipped or used instead of the next exon ATCCATATGTGAAATTGGAAATGTTCGGAGAAGATAGAAAACGATTGAAAAAGAAGAAAACGAAT ATCAAACGGAAAACTTTGAATCCATATTTTAATGAGAGTTTTGTATTTGACAAATTGCCATTGCA TAAAATGAAG phase 0 U55856.1 17888-18027 - this exon is skipped if the previous exon is used ATCCTTATGTGAAGATTGTGTTGATGCAAGGTGGAAAACGACTGAAAAAGAAGAAGACATCAATC AAAAAGTGTACACTTAACCCATATTATAACGAATCGTTCAGCTTTGAAGTGCCTTTCGAACAAAT TCAG phase 0 U55856.1 18144-18277 - AAAGTTTCCCTTATGATCACTGTGATGGATTATGATAAACTTGGATCCAATGACGCTATTGGAAG GTGTCTATTGGGATGTAATGGAACCGGTGCCGAGCTGAG phase +2 U55856.1 18363-18466 - GCATTGGATGGATATGTTGGCTTCACCACGTCGTCCAATTGCTCAATGGCATACACTTGGACCAG TTGAAGAAGAAGGTGATAAGAAAGATGATAAGAAATAAATGTATGACTTTATCATTTTTTTTAAA *** TTTAAATGCCTTATTCAATCTAAATTTTTCACTTTTTTTTAATTCAAAGAGATATTATTTTTCCT GCTTGTCCTTTTTCGTTCAAAGTTTCAATTTCCCGATGTACATAGGATCTAGTCGCTGTGAAAAT CCATGCATCAAATATTTTTATTTTATTTTTTTATAATGCAATGTGTAGAAATGAGTAGCAATTGT CAGTGCCAAGGCGGTGATTTAAATATTAATCTCTCTTTGTTTTCACTCTTCCAACATGTTCCTTA TATACTCGAATTCAGAGTTTCTCCTTTTCTTAATTTATTTAACTTTTCCAATTTATTTATTCGTT AGATGTCTATTTTTTGGAAATTTGTGTTTTTTTCTGTCAATCTTGCTGACATAATTAAATTGCAT CGTTTACACATTTTTCTTTTTGGTAAATAAATAACTTCT U55856.1 18717-19275 -------------------------------------------------------------------------------- 5. Caenorhabditis Chromosome X Size >3.2 Kb Does not agree with Wormbase gene prediction T10B10.5 MKIPDVLENLEITEQNFLIVLCATVVIVVLFVSFFLVKTKNKLN^ WYDQNVLDMGQNPTHLRCTTIYRTNTDDATPNPE^ SKLGESFPSTSSIPKGDLTSLFMIPKAKKGARSMFSNLHQNQFDRGLYQFP^ TGDESACSSVTMSAVGSIQLSVSHDVNLNLLTVTIVKAVDLPTKREDDLPNPFMKVSLE^ IPDSKKPNVDHQTKTYNGTASPLINEDFYFS^ VTSQQVSICRLEVMVYDYDQF^ SVDECVGYCWLTLGRINEHFEHDLPTLFWAEVLPYEDGEN^ KGYGQVLFALSYLSHAQRLTMNIFKVRNVRFRNGG^ NVALRVTLLDGEEKPLKKKKTSLKKAARSVQFNECLTFSIPKHTLCEVFITVE^ LITETGTFGIASRTLSRMQLPLH^ KCKDLWRAIIREEKSQARWYPFEQP - ATGAAGATACCAGATGTGTTGGAAAACCTTGAAATAACCGAGCAAAACTTCCTCATAGTTTTATG *** CGCCACTGTGGTGATTGTTGTGCTTTTCGTATCATTTTTCCTGGTCAAAACTAAAAACAAACTTA ATTG phase +2 Z72514.1 (37057-36924) - GTATGATCAAAACGTGCTTGATATGGGCCAAAACCCAACACATCTAAGATGTACCACCATTTATC GCACTAATACAGATGACGCAACTCCGAATCCAGAATC phase +2 Z72514.1 (36876-36775) - CAAACTTGGAGAAAGTTTTCCATCGACTAGTAGCATTCCAAAGGGTGATCTGACGAGTTTGTTTA TGATTCCAAAAGCGAAAAAAGGCGCCAGGAGCATGTTCTCCAATCTTCATCAGAATCAGTTTGAT AGGGGACTTTATCAGTTTCCG phase 0 Z72514.1 (36724-36574) - ACGGGTGACGAATCTGCATGTAGCTCAGTTACAATGTCCGCAGTTGGCTCAATTCAGCTTAGCGT CAGTCATGATGTCAACTTAAATCTATTAACAGTGACAATAGTCAAAGCAGTTGATCTACCCACTA AGCGGGAAGATGATCTGCCAAATCCGTTCATGAAAGTTTCCTTGGAG phase 0 Z72514.1 (36271-36095) - ATCCCGGACTCTAAAAAGCCAAACGTTGATCATCAAACCAAGACGTATAACGGAACGGCGTCCCC TCTTATTAATGAGGATTTTTATTTTTCG phase 0 Z72514.1 (36047-35955) - GTAACATCACAGCAAGTCAGCATATGCCGTCTGGAGGTGATGGTCTACGACTATGATCAATTCAG phase +2 Z72514.1 (35906-35842) - TGTTGATGAATGTGTTGGGTATTGCTGGTTGACACTTGGCAGAATAAATGAGCACTTTGAGCACG ATCTTCCTACATTATTCTGGGCGGAAGTCTTGCCGTACGAAGACGGAGAAAAT phase 0 Z72514.1 (34954-34837) - AAAGGATACGGGCAGGTTCTGTTCGCGTTATCCTATCTTTCCCATGCACAACGACTCACAATGAA CATTTTCAAAGTGAGGAATGTGAGGTTTAGGAATGGAGGAA phase +1 Z72514.1 (34787-34682) - ATGTGGCGCTCCGGGTAACACTTCTAGACGGAGAAGAAAAGCCGCTGAAAAAGAAAAAAACAAGCT TGAAGAAAGCGGCGAGATCAGTGCAGTTCAATGAATGTCTGACATTTTCAATACCAAAGCACACAT TATGTGAAGTGTTTATCACAGTGGAA phase 0 Z72514.1 (34626-34469) - TTGATCACTGAAACCGGCACATTCGGAATCGCATCACGCACCCTGTCCCGGATGCAATTGCCATTG CACAA phase +2 Z72514.1 (34190-34120) - GTGTAAAGACTTATGGAGAGCAATTATCCGCGAAGAGAAATCGCAGGCAAGATGGTATCCGTTTGA ACAGCCCTGACAACGATTTCTGTTTCATTTTTTTTTGTAATGGAACGAATTTCGGATAAATCTCGG *** ATTTGGATATTAATATTTGAGTTTGTGTTGTATTTTGAAATATGTTGAG Z72514.1 (34022-33842) -------------------------------------------------------------------------------- 6. Caenorhabditis syt7 Cesyt7 Chromosome 2 size >4.5 Kb No transcripts Derived from similarity to other syts Does not agree with Wormbase gene prediction C08G5.4 MVVHEITVPVEFLYVVGAAMLSAFVVVGAAVY^ KMRKPVDIDELDCEQTARLFRPEVLAPTLTVDMESRKVQPSLKARLSQSINPWKTS^ IAEIFGDRFFNNSKNFQIIDQLRPEVVSEFRGRINFSVAFEKECSTLHVHLMEAVDLPVKDFT^ GSSDPYVRAFLLQDPGQSERSKVHRRNLNPTFNETLSFR^ GHSMKKLHDMTLVLQVMDYDRFSSDDPIGEILLPLKHVKFESSPVYWKHLQRPTVSK^ DACGEIMISLCYLPTSGKITVSIIKARDLHAKDRTRHY^ DTYVKMWMVQQGNKLEKRKTSVKPHTPSPIFNESFAFSIPVKQVLLAEVNLVLTAMEYDVIG SNEEIGHVIVGGLGSEHGQRHWSECVNHPEQPVAMWHKLCPKW - ATGGTGGTCCACGAGATTACGGTGCCTGTGGAGTTCCTGTACGTGGTCGGTGCAGCGATGCTTTC *** GGCTTTTGTAGTGGTTGGAGCAGCGGTTTATAA phase +2 AF098985.2 (15556-15459) - AATGAGAAAACCGGTGGATATTGACGAATTGGATTGTGAGCAGACCGCGAGGCTTTTCAGGCCAG AAGTTTTGGCTCCAACATTAACAGTTGATATGGAATCTAGAAAAGTGCAACCTTCGTTGAAAGCT AGGCTTTCACAGTCAATCAATCCTTGGAAGACTTCG phase 0 AF098985.2 (15401-15236) - ATTGCTGAAATTTTCGGTGATCGATTTTTTAATAATTCAAAAAATTTCCAGATAATCGACCAACT CCGGCCAGAAGTGGTTAGCGAATTCCGTGGACGTATCAACTTTTCGGTGGCTTTTGAAAAAGAAT GCTCGACCCTTCATGTGCATCTCATGGAGGCCGTGGACCTCCCGGTTAAAGACTTTACAG phase +1 AF098985.2 (15028-14839) - GCTCCTCAGACCCATATGTCCGTGCCTTCTTGCTCCAGGACCCCGGGCAAAGTGAGCGGAGCAAG GTGCATCGACGGAACTTGAACCCAACATTCAATGAGACGCTGTCTTTTAGAG phase +1 AF098985.2 (14632-14516) - GGCACTCGATGAAGAAACTTCACGACATGACTCTAGTGCTCCAGGTGATGGATTACGATAGGTTC TCGTCGGATGACCCGATTGGAGAAATTCTATTACCTCTGAAGCACGTGAAATTCGAGAGCAGCCC GGTTTACTGGAAGCATTTGCAAAGACCAACTGTGTCGAAG phase 0 AF098985.2 (12153-11984) - GACGCCTGTGGAGAAATCATGATCTCCCTGTGCTACTTGCCAACTTCTGGGAAGATTACGGTATC CATAATCAAGGCTCGTGACTTGCACGCGAAGGATCGCACCAGGCACTATG phase +1 AF098985.2 (11935-11821) - ATACCTATGTAAAAATGTGGATGGTCCAGCAAGGCAATAAATTGGAAAAACGGAAAACTTCTGTG AAGCCCCATACCCCATCTCCAATCTTCAACGAGTCCTTTGCATTTTCAATTCCCGTCAAACAAGT TCTTCTGGCCGAGGTCAACTTGGTACTGACCGCTATGGAGTACGACGTCATCGGGTCCAATGAGG AGATTGGCCACGTCATCGTCGGTGGCCTAGGATCCGAACACGGCCAGCGGCACTGGAGTGAGTGT GTCAATCATCCGGAGCAACCAGTCGCCATGTGGCATAAACTTTGCCCAAAATGGTGA *** AF098985.2 (11344-11028) -------------------------------------------------------------------------------- 7. Caenorhabditis syt4 Cesyt4 Chromosome 1 Size >5 Kb Agrees with Wormbase gene prediction T23H2.2 MPHYQEGLAKSAGH^ EWFYLGVGGAVGLAALVAVAALLAVRKRRQYPSLLLPPRQ^ VIAVRGGFPKGPGGLKQSPSPLQSPLSNDSTPSPVVPLQNLLEDRTRK^ LSPSELPSERGNISFTLSYDSHTLTLLVSIINCRNLCEMVVSRDGQCLLDPYVKLQLLPE REHRVKTRIVRSTTSPVYEEQFAMYGVTHEQVNFATLHFQ^ VVAFDRYSRDTVVGECVYRLADAELQVHNEM^ RVELPLLPRATDTVAARGELLLSLTYQAAFNNLTVVVLKARGLGGRNDAGTA^ DPFVKLYLRKESGERIVKKRTHVRRSTLNPVYNESFVFELPDDRLEHSVIDLQ^ VINHDRVNRNDVIGRALLNMEDSHVVEVLENPGRQVAQWHHLD - CTTCAGCCGACCGATCGACGTCCTCTCGTCACATGCCCCACTATCAGGAGGGGTTGGCGAAGAGC *** GCGGGACATG phase +1 U80033.3 91-165 - AATGGTTCTATCTCGGAGTTGGTGGAGCCGTCGGTCTCGCGGCTCTTGTAGCCGTTGCCGCTCTT CTCGCAGTTCGTAAACGTCGTCAATATCCGTCACTTCTTCTTCCCCCGAGACAG phase 0 U80033.3 1875-1993 - GTGATTGCTGTCCGTGGTGGATTTCCCAAGGGCCCTGGAGGCCTAAAGCAGAGCCCATCTCCTCT TCAATCGCCGCTTTCTAATGACTCCACGCCATCGCCAGTCGTTCCATTGCAGAATCTTTTGGAGG ATCGAACCAGAAAA phase 0 U80033.3 2542-2685 - CTATCCCCATCAGAGCTTCCATCCGAACGTGGAAACATCTCGTTCACATTGAGCTATGACTCTCA CACTCTAACCCTTCTTGTCAGTATCATAAACTGCCGAAATCTCTGTGAGATGGTAGTTTCTCGTG ACGGACAATGTCTCCTTGATCCATATGTCAAGTTACAACTACTTCCCGAACGTGAGCATCGTGTC AAGACGCGTATCGTTCGTTCAACCACCAGCCCAGTTTATGAGGAGCAATTTGCAATGTATGGAGT CACTCACGAGCAAGTTAACTTTGCCACGTTGCACTTCCAG phase 0 U80033.3 2874-3173 - GTCGTCGCATTCGATCGTTACTCCCGAGACACTGTCGTTGGAGAATGTGTCTACAGATTGGCTGA TGCAGAACTTCAAGTTCACAATGAGATGAG phase +2 U80033.3 3216-3310 - AGTTGAACTCCCTCTCCTCCCACGTGCCACTGATACTGTAGCTGCTCGTGGAGAGCTTCTTCTCT CATTGACATATCAAGCTGCATTCAACAATTTGACAGTTGTTGTTCTCAAAGCCCGTGGACTCGGA GGACGAAACGATGCCGGAACTGCAG phase +1 U80033.3 3605-3759 - ATCCATTTGTCAAGTTATACTTGCGCAAGGAAAGTGGAGAACGTATCGTTAAAAAGAGAACACAT GTGAGAAGGTCTACTTTGAATCCTGTCTACAACGAATCGTTTGTCTTTGAACTTCCAGATGATAG ATTGGAACATTCTGTTATTGACTTGCAG phase 0 U80033.3 3872-4029 - GTGATCAATCATGACCGTGTTAACCGTAATGATGTAATTGGCCGTGCCCTTCTTAATATGGAAGA TTCTCACGTTGTCGAAGTTCTTGAGAATCCAGGAAGACAAGTTGCTCAGTGGCATCATCTCGAT TAAAAAATTTAAACCTTTTTTTTTGCTTTTATTTCTGTAGACCTCTACTGGTTTTCGAACCTAAT *** CCCCCATACTTTTCCATTAAATAACAGTCATCACTCTCTCCGTCCACAACTGAAATTTTGTATTC TCTCTCCCATCATGTTTTGTCAGATAATTATATTCATTTTAACATTTTAACATGAATTCTCTCTC TCTCACAGACACGTTGACATCTGAAACAGGCAATTAACATCATTTTTAATTTCAAAT U80033.3 4738-5118 -------------------------------------------------------------------------------- 8. Anopheles syt1 Agsyt1 Chromosome 3R Size >10.3 Kb Does not agree with the Anopheles Genome Sequencing Consortium gene prediction ENSANGG00000007607 (http://www.ncbi.nlm.nih.gov) Transcript complexity affecting pre-C2A region and C2B Edited positions underlined with changes indicated below MAPNSRLWKREAEVESDAAKLADVASTLATKIFGHKQKHHTTTTESELDA^ EENEDFSTATPTKGEAEKLGDKAAEMTEALAHEMGIPTWGLVSIIIVVVLIILGICGFCIRR CFRKRRSKDGKKGMKGVDLKS[VQLLGSAYKEK^ VQPDMEELTENAEEGDEGESKQSEQKLGKLQYK^ LEYDFNSNALTVTVIQAEELPALDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLNPVFNESFTFK^ SLPYAEAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCQIDLAQTIEEWRELQSVEGEGGQ^ ENKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLS^ DPYVKIALMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQ^ -- VR KVNLVVTVVDYDRIGTSEPIGKVVLGYNASGTELRHWSDMLASPRRPIAQWHTLKDPDDDKKD - GCTACCATCTTGAGGATGTGAAAATTTTGCTCTTTCAAGTTTTCCAAGTTCCAAGTGAATGGTAC TTACACTGCTGAAGTGAAAAGAACTATTTCTTTCCCGTGATAGTAGTACGATGATAGTTTAAGCG TGCAACAGTGAAAGGAGTGAAGCGTTAGCAAGAAACAAACGTGCAAGTTTGAAG aaab01008964.1 (9168713-9168530) - GAAAAGCTAAAAATGGCTCCCAATTCTCGTTTGTGGAAGAGAGAGGCCGAGGTGGAGTCTGATGC *** GGCAAAGCTTGCGGATGTAGCCAGTACACTAGCTACAAAAATATTCGGACACAAGCAAAAGCACC ACACGACCACTACGGAGTCTGAGCTTGACGCTG phase +1 aaab01008964.1 (9168335-9168173) - AGGAAAATGAGGATTTCAGCACGGCAACGCCAACCAAAGGCGAGGCGGAAAAGCTGGGAGACAAG GCGGCCGAGATGACGGAGGCGTTAGCCCACGAGATGGGCATCCCGACGTGGGGGCTCGTGTCTAT CATCATCGTCGTAGTACTTATAATTTTGGGCATTTGCGGTTTCTGCATCCGTCGCTGCTTCCGAA AGAGACGATCCAAAGATGGCAAGAAGGGCATGAAAGGCGTTGATTTGAAATCG[GTACAATTATT AGGTTCAGCATACAAAGAAAAG phase 0 aaab01008964.1 (9167627-9167380]9167347) - GTACAACCTGATATGGAAGAGCTTACCGAAAATGCCGAAGAAGGAGATGAAGGTGAAAGCAAACA GAGCGAGCAAAAGTTAGGCAAGCTGCAGTACAAG phase 0 aaab01008964.1 (9167063-9166965) - TTGGAATATGATTTCAACTCGAATGCTCTCACCGTAACCGTCATACAAGCGGAGGAACTTCCCGC CCTGGATATGGGAGGTACTTCTGATCCTTACGTCAAAGTGTACCTATTACCTGACAAAAAGAAGA AATTCGAAACGAAAGTTCACCGTAAAACGCTGAATCCAGTGTTTAACGAATCATTTACCTTCAAG phase 0 aaab01008964.1 (9166862-9166668) - AGTCTCCCATATGCAGAAGCAATGAACAAGACGCTGGTGTTTGCCATTTTTGACTTTGATCGCTT TTCCAAACATGACCAAATAGGAGAGGTAAAGGTACCGCTTTGCCAGATTGATTTGGCACAAACGA TTGAAGAATGGAGAGAATTGCAGAGCGTTGAGGGTGAAGGTGGACAG phase 0 aaab01008964.1 (9166206-9166030) - GAAAATAAGTTGGGAGACATTTGCTTCTCATTGCGCTATGTACCCACTGCAGGTAAATTAACTGT CGTTATCTTGGAAGCGAAAAATCTCAAAAAGATGGATGTTGGCGGTTTATCAG phase +1 aaab01008964.1 (9162205-9162088) - ATCCATACGTCAAGATAGCCCTGATGCAGAATGGAAAGCGTTTGAAAAAGAAAAAGACTAGTATC - g AAAAAATGTACACTAAACCCCTACTACAATGAGTCGTTCTCATTTGAAGTTCCTTTCGAACAAATACAA - g edited positions underlined, edits indicated in lower case phase 0 aaab01008964.1 (9161907-9161774) - AAAGTAAATCTTGTCGTAACGGTAGTGGATTATGATCGCATCGGCACCTCCGAACCAATTGGAAA GGTTGTTCTAGGCTACAATGCAAGCGGCACGGAGCTGCGCCACTGGTCGGACATGTTGGCCTCCC CCAGGCGCCCGATAGCGCAGTGGCACACGCTGAAAGATCCGGACGATGACAAGAAGGATTAAGCC *** GGCTACTAACCAACGAGCAACTAAGGATGATGATCCCGGACGAGGACGGTGCGGCGCGGTATTAT TATCAGTTGGGGATTATAACACCCAAATCGGAAGGAAAGGTTGGCAACCCGGGCATGTTGCACAT GTTCCATCACATGTTACAACCAGTTGCGCTGTAAAATAACCTTTCCAAAGAGTCGACAAGAGAGA GGTATTCCATTTTGCACAATTTTGGCTCTGTGTTAACTTTCGAACATAAACTATTCCTATACACA TATTGCACACCCCTTTCTTTCTTGCGTTTTTGACGATACCGAGGAGGAGGGAGAGATCATTGAGT AATGTAATGTGAGGCTATTTTACAACGGATGATTCGTAGAAAGAGTATTATATATATACATACAT ATATATTGTGTAGTATTGTCAAACTGACTGCACACGCACCTATTTATGTAAATTTTTGTTTCCCT CCGCTACTCATACTACTCATAACATCTCATCCCTACTGTCTCACCCCAAAAGCGAACTAATCAAG TAATGGATGGCATCAATCAATCAATCATTCTAGCAAGAAGTCTTTTTGATTT aaab01008964.1 (9159169-9158403) -------------------------------------------------------------------------------- 9. Anopheles syt4 Agsyt4 Chromosome 2R Size >7.5 Kb Agrees with the Anopheles Genome Sequencing Consortium gene prediction ENSANGG00000016057 Transcript complexity affecting TM region MGDHGPDMNTLET^ DYVVLIS]VVPAVLGLTAAAILAVTACFCARRFRRQHKKAGHEASSLPFQPPRPPKAVRS PSGQPPQYLKKSPSPTSIKPLPGHLPAQSPTDQTTAAGGTTAATATTTLATTTTTTSIVP PTKYTEENELIPKNAQLEPKSPDVSELGDPSACENGDGTEHGKLGTIVFKLRFLADRSAL VVSVVRCRGLPGKNHGTAAAELSTIGGGTMLCNGSANGKQTATDPYVKLQLLPDKQHKVKT^ RVLRNTRNPVYDEDFTFYGLTLSELAGMSLHFVVLSFDRYSRDDVIGEVVCPLSGIDLQQ IENQQVALSREIQPRSLKIRAQGRGELLISLCWQPAAARLTVVLLKARNLPRMDVTGLAD PYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPTTEGAGGATLDGVSLELMLLD WDRVTKNEVIGRLELGGPRSNGSALNHWKEVCNSPRRQIADWHKLRE - GCATAAGTGCGACATTGCGGTCATATTGTTCGGAGTTCCGTACAAGCGCATCGCATCCCAAGTAT CCCAATTGTTGCCCAGACTGCTGGTGCTGGTGCTGCGTTCTGATCAGTGTTCAGTGCTTTCAAAA AGGATTCAACAATGGTACGCATTGAATACTGGGTGCCACAAGCATTATTCGTTCACTAGTTTGAA GGTGTAACAAAACTCGGTACCGAGGTGGGACGTTAGTGTCGACGTTTGCTAAAAAAAACACTTCG TAGGACAACTCCTTTCAAGCGAGTGTGTAGGCGCGCGCGTGCGTTTATTTCCTCCGTGTCCGCGT GTGAGTGTGTTTGTGCGTTGGAGGGTGTTTTTGTGTGCTTCAGTGTGTGCCCGGAAGAGATCCCA CTGCTGGCTGGATTTTTAAGCAAATTGTGTAATCTCTGCCTGTAAGTTCAGTGAAGTGTCTCCGT GTGGTTGTGTGGGTGGAGTTTGTATTCCTGTTTGAATCCTGTCTCGTCGGCACAACGGTGGAGTC CGGAATCATCAACAAGATGGGCGACCACGGCCCGGACATGAACACGCTGGAAACTG *** phase +1 aaab01008987.1 (5623896-5623321) - ATTACGTTGTGCTCATTTCAG]TGGTGCCAGCCGTGCTCGGGCTCACCGCAGCCGCCATACTGGC CGTGACGGCCTGCTTCTGTGCCCGGCGCTTCCGCCGCCAGCACAAGAAGGCGGGCCACGAGGCGT CCTCGCTGCCGTTCCAGCCACCGCGGCCACCGAAAGCGGTCCGCTCGCCGAGCGGCCAGCCGCCC CAGTATCTGAAGAAATCACCGTCGCCGACCAGCATCAAGCCGCTGCCGGGCCACCTGCCCGCCCA GTCACCGACCGACCAGACGACGGCCGCCGGCGGAACGACCGCAGCAACGGCGACGACCACGCTGG CCACGACCACCACCACCACCAGCATCGTGCCACCGACCAAGTACACCGAGGAGAACGAGCTGATA CCGAAGAATGCGCAGCTGGAACCGAAATCACCGGACGTGTCGGAGCTGGGCGATCCGAGCGCGTG CGAGAACGGGGACGGCACCGAGCACGGCAAGCTCGGTACGATCGTGTTCAAGCTACGCTTTCTGG CCGACCGGAGCGCGCTGGTCGTGTCGGTGGTGCGGTGCCGCGGTCTGCCCGGCAAGAACCACGGT ACGGCGGCGGCCGAACTGAGCACGATCGGGGGCGGCACGATGCTGTGCAACGGGAGCGCCAACGG CAAGCAGACGGCCACCGATCCGTACGTGAAGCTGCAGCTGCTGCCCGACAAGCAGCACAAGGTGA AAACTCG phase +2 aaab01008987.1 (5618391/5618370-5617671) - AGTGCTACGCAACACGCGCAACCCGGTGTATGATGAGGACTTTACCTTCTACGGACTGACGCTGA GCGAGCTGGCCGGCATGTCGCTGCACTTCGTGGTGCTGAGCTTCGACCGCTACAGCCGGGACGAC GTTATTGGTGAGGTCGTCTGCCCGCTGTCCGGTATCGACCTGCAGCAGATCGAGAACCAGCAGGT AGCGCTGAGCCGCGAGATTCAACCGCGCAGTCTGAAGATCCGGGCGCAGGGCCGTGGCGAGCTGC TGATTTCGCTCTGCTGGCAGCCGGCCGCCGCCCGGCTGACCGTCGTACTGCTGAAGGCACGCAAC CTGCCGCGCATGGATGTGACCGGGCTGGCCGACCCGTACGTCAAGATCTACCTGCTGTACAATGG GCAGCGCATCGCGAAGAAGAAGACGCACGTGAAGAAGCGCACGCTCAGCCCGGTGTTTAACGAAA GCTTCGCGTTCGACATACCGACGACCGAGGGGGCCGGCGGCGCCACGCTGGACGGTGTTTCGCTT GAGCTGATGCTGCTGGACTGGGACCGGGTCACCAAGAACGAGGTGATCGGGCGCCTCGAGCTGGG CGGACCGCGCAGTAACGGTTCCGCCCTGAACCACTGGAAGGAGGTGTGCAACTCACCGCGCCGCC AGATTGCCGATTGGCACAAGCTGCGGGAATAG *** aaab01008987.1 (5617094-5616413) -------------------------------------------------------------------------------- 10. Anopheles Chromosome 3R Size >4.5 Kb No transcripts Derived from similarity to 16. Does not agree with the Anopheles Genome Sequencing Consortium gene prediction ENSANGG00000003924 MKSPPIASWFSQSDGVNPTQIAIYGSVSFLVVSLLGLLIYITCSKRYRLNWYEK NLLESAKEREAAQRG^ SPRQSTGACGPSPVLG^ ETTGEDSGDSACSSSRSVIAAPSGAVAIA STGKHVVLVTSSPAKPTTSMVATVAGGSRSSATGAAAGKVDTSQGTKIDMLDSASTCSTV SRDELGGEDARGAIHLTLSYDPAAGILNVKLVE^ AQDLQPQDFSGTADPYAKIRLLPDRNN MWQTRIHKKTLNP^ VFDEDFVFEVRSATIGRRTLEILLFDFDAYSRHVCIGGVQFPLAQVC LAERIDIWRPLLPYTEQDNKQDLGDLMVSLSYQPAAEKLTVVIIKARNLRVIDGTRNSSD PYVKVCLYNADGRRLKKRKTTVARNTTAPVYNEALTFDISRETLRDCSIEFQVLHDSLLG KNETLGRATVGSGPEFRQENRKFFDELFRTRAATAQWISLCELKLKSDTPSKKK - GCGCCCAACTCTCCGCACAATGAAGTCACCACCAATCGCCAGCTGGTTCAGCCAGTCG *** GATGGCGTAAATCCCACCCAGATAGCCATCTACGGTTCGGTATCGTTCCTGGTCGTGT CCCTGCTCGGGTTGCTAATTTACATCACCTGCTCGAAGCGGTACCGGCTCAACTGGTA CGAAAAGAATCTGCTCGAGTCGGCCAAAGAGCGTGAGGCGGCCCAGCGCGGCAG phase +2 aaab01008944.1 1972853-1973080 - CCCACGGCAGTCCACAGGCGCGTGCGGACCATCCCCCGTTCTGGGC phase 0 aaab01008944.1 1973253-1973298 - GAAACGACCGGCGAGGACAGCGGTGATTCGGCGTGCAGCAGTAGTAGGTCAGTTATAG CGGCACCCAGCGGTGCGGTCGCCATTGCCAGCACCGGGAAGCATGTGGTGCTCGTTAC GTCAAGCCCGGCCAAACCGACCACCTCGATGGTGGCTACGGTGGCCGGCGGAAGTCGC AGCAGTGCGACAGGAGCAGCAGCAGGCAAGGTTGACACGAGCCAAGGCACCAAGATCG ATATGCTAGACTCGGCCAGTACGTGCAGTACGGTGAGCCGGGACGAGCTGGGCGGTGA GGATGCACGCGGTGCGATCCATCTGACACTGAGCTACGATCCGGCGGCGGGCATCCTG AACGTGAAGCTGGTCGAG phase 0 aaab01008944.1 1973495-1973860 - GCACAGGACCTGCAGCCGCAGGACTTCAGTGGGACGGCGGATCCGTACGCCAAGATAA GGCTACTGCCCGACCGGAACAATATGTGGCAGACGAGAATTCACAAGAAAACGCTCAA CCCTG phase +1 aaab01008944.1 1973960-1974080 - TGTTTGACGAAGACTTTGTGTTTGAGGTACGCTCCGCCACGATCGGCCGGCGAACGCT CGAGATACTCCTGTTCGACTTTGACGCGTACTCGCGCCACGTGTGCATCGGTGGCGTA CAGTTCCCGCTCGCCCAGGTGTGTCTGGCCGAGCGGATAGACATCTGGCGCCCGCTGC TACCGTACACCGAGCAGGACAACAAGCAGGACCTAGGCGATTTGATGGTTTCACTCTC CTACCAACCCGCAGCCGAGAAGCTTACGGTTGTCATCATAAAGGCGCGCAACCTGCGC GTCATCGACGGTACGCGCAACTCGTCCGATCCGTACGTGAAGGTGTGCCTGTACAATG CGGACGGCAGGCGGCTGAAGAAGCGCAAAACAACGGTAGCCCGCAATACGACCGCACC GGTGTACAACGAGGCCCTCACGTTCGACATCAGCCGCGAGACGTTGCGCGACTGTTCG ATCGAGTTCCAGGTGCTGCACGACAGTTTGCTCGGCAAGAACGAAACCCTAGGCCGGG CGACGGTTGGCAGCGGGCCCGAGTTTCGGCAGGAAAATCGCAAGTTCTTCGACGAGCT GTTCCGTACGCGGGCCGCCACCGCCCAGTGGATATCGTTGTGCGAGCTAAAGCTCAAG TCGGACACGCCGTCGAAGAAGAAGTGA *** aaab01008944.1 1976730-1977394 -------------------------------------------------------------------------------- 11. Anopheles syt13 Agsyt13 Chromosome 3L Size >6.2 Kb No transcripts Derived from similarity to 17. Does not agree with the Anopheles Genome Sequencing Consortium gene prediction ENSANGG00000014288 Nterm missing FPPSGTMVFVSSAVLGAAAGTGLALLVAVTIVMYRYYVVRRKGKEWAELDRLEEKKAARK INLQDCNVTSGSVPIQPASSVVHHSISSETLGTGAVEVTPSPLQPTLSATGSTKKSYGTS DTRTGPGCRPAHAAASTASRNNSMESVHSRSS^ KSRSPSPMRTFSLEGRFPIGGPSNHSAA AVLADGTERGSKASLASVVSGGGSPRDFSSPKKRNSTFSGVVSLAGDGNVPDSPIGSIRS DSSRSPRRRVPVILAANDIHSVLGRFHLRLKYDGSKEELLVHLVE^ AQDLTPAGDTGFRDPYVKMYLEPDEEQRTQQTAVHRTETHPYFDQQLSFPLKPRNLVKSNFVLQ^ LLDYDRFSHDEVVGEIRFLLNTLDLSGCELWGDLIAVRKPSETTAELLISLSYLPQAERL TVVVMKAKNLSISHEPFVK^ LYLLVNDKRTKKRKTSAIRALDPTNPIWNEAFTFELPSSQLQDAGVELFVTSNEAEGQDL GCGVGLREGGSGTQHWQDLMQNNRKPIAMWHVLR - AATTCCCACCGTCCGGCACG ATGGTGTTCGTCAGCTCGGCTGTGCTCGGTGCAGCCGCCGGTACCGGTTTGGCCTTGCTGGT CGCTGTCACAATCGTCATGTACCGGTACTACGTGGTACGCCGAAAGGGTAAGGAATGGGCCG AGCTGGACCGACTGGAAGAGAAAAAGGCAGCCCGGAAGATCAATCTGCAGGACTGTAACGTG ACGAGCGGTTCCGTACCGATTCAACCAGCCAGCAGCGTCGTTCATCATTCAATTAGCTCGGA GACGCTGGGCACGGGTGCAGTCGAAGTAACGCCCAGCCCACTTCAGCCGACACTGTCCGCTA CGGGTTCGACGAAAAAATCATACGGCACGAGCGACACACGCACGGGACCCGGTTGTCGACCG GCTCATGCGGCGGCCTCGACCGCCTCACGTAACAACAGCATGGAGAGTGTTCATTCGAGAAG TTCG phase 0 aaab01008848.1 (286403-285946) - AAATCACGATCACCAAGTCCAATGCGTACGTTCAGCCTGGAGGGACGCTTTCCTATCGGTGG CCCGAGTAATCACAGTGCTGCTGCAGTACTTGCCGACGGTACGGAACGGGGTAGCAAAGCCA GTCTAGCATCCGTCGTCAGTGGTGGTGGTAGTCCACGCGATTTCAGCTCACCCAAGAAACGC AACAGCACCTTCTCGGGCGTCGTGTCACTGGCTGGCGATGGGAACGTCCCGGACAGTCCCAT CGGTTCCATCCGTTCCGATAGCAGCCGTTCGCCCCGACGACGCGTCCCGGTGATTCTAGCGG CAAACGACATCCACTCGGTACTTGGACGCTTTCATCTGCGGTTAAAGTACGACGGCAGCAAG GAAGAGCTGCTGGTACATTTGGTTGAGG phase +1 aaab01008848.1 (283198-282799) - CACAAGATCTAACTCCGGCTGGAGATACCGGATTCCGCGATCCCTACGTAAAGATGTACCTG GAGCCGGATGAGGAGCAGCGAACACAACAGACGGCTGTGCATCGTACCGAAACGCATCCGTA CTTTGACCAGCAGCTTTCCTTCCCGCTGAAACCTCGCAATCTCGTCAAGAGCAACTTTGTGC TGCAG phase 0 aaab01008848.1 (282692-282502) - CTGTTGGACTATGATCGGTTTTCACACGACGAAGTCGTAGGCGAGATTCGGTTCCTGCTGAA CACGTTGGACCTTTCCGGCTGCGAGCTGTGGGGTGATTTGATCGCCGTTCGCAAACCCTCCG AAACGACGGCCGAGCTGCTGATCTCCCTCAGCTACCTTCCCCAGGCCGAGCGGCTCACGGTG GTCGTGATGAAGGCAAAGAACCTATCCATCTCCCATGAACCATTCGTTAAG phase 0 aaab01008848.1 (280758-280522) - CTATATCTGTTGGTAAACGACAAGCGCACGAAAAAACGTAAAACCAGTGCGATCCGAGCGCT CGACCCAACCAATCCGATATGGAACGAGGCGTTCACGTTCGAGTTGCCCTCGTCCCAGCTGC AGGATGCCGGCGTGGAGCTGTTCGTAACGTCGAACGAGGCCGAAGGGCAGGATCTGGGCTGT GGGGTGGGTTTACGCGAAGGTGGCAGCGGTACGCAGCACTGGCAGGATCTGATGCAGAACAA TCGTAAACCCATCGCCATGTGGCACGTTCTGCGATAA *** aaab01008848.1 (280437-280153) -------------------------------------------------------------------------------- 12. Anopheles syt16 Agsyt16 Chromosome X Size >2.4 Kb No transcripts Derived from similarity to 19. Does not agree with the Anopheles Genome Sequencing Consortium gene prediction ENSANGG00000018234 MRNDLKRPEGSTPCDN^ AHMELTTFFGLALGFVALILVLFLYVHKIRCFGAAPPFLPFDEQLRAEKTFHRIRNRFAY DGNNSSDSEDDTLRRLKLDPCGAGYGGGVGVGGGGSISCYHANEAVAGLDQSVVA^ HRHKSRDPLAMAEGGKIGMPHSSNDCSSGSSNEGNLDYGGTRLSLDAHLSNDRLAAGAAP ARLDGRLTGSAELKLRGEPPLLPELTKESDLERDLVPGYRKKTTKGATNGSRGEGLVVAA ASTASS^ PLYDTSDLKSLKSDAGGAVVPGPAGYDQPAGSGAHPPATGSNGTLEISLLYDAPMRKMTV HVLQARGIASRGDKGQLTHTQVRLLMLPAKRQKHKTKIRSGECPQFMESFLLHRVNPEEV NSMGLRIRVYGCERMRRERLIGETIVSFANIDLELETNLWLPLESRSSST^ DTASTSDLLSIARSDSAGSTTSMQHGGVPELLLGLGYNGITGRLTVE^ IVKGSHFRNHTLPKVPDTYVKLCLVSSMGQEIARAKTSTRRGQSNPLFKETFIFQ^ VAMFQLNDVTLIVSVYAKRNMKRNEMVGWFSMGLNSSGPEEMIHWNEMRESSSRSELITR WHVLVDS - ATGCGGAATGACCTAAAGCGCCCGGAAGGCTCGACCCCCTGCGACAATG *** phase +1 aaab01008846.1 3658979-3659027 - CGCACATGGAACTTACAACATTTTTTGGCTTAGCATTGGGATTTGTGGCACTCATCTTGGTGCTG TTCCTGTACGTCCACAAGATACGGTGCTTCGGGGCGGCCCCCCCATTCCTGCCGTTCGACGAGCA GCTGCGGGCGGAGAAGACGTTCCACCGCATACGGAACCGGTTCGCGTACGATGGGAACAACAGCT CCGACTCGGAGGACGACACGCTGCGCCGGCTCAAGCTGGACCCGTGCGGGGCCGGCTACGGCGGG GGCGTGGGCGTCGGCGGCGGTGGCAGCATCTCCTGCTACCACGCGAACGAGGCCGTCGCCGGGCT GGACCAGTCGGTGGTGGCCCA phase +2 aaab01008846.1 3659217-3659562 - TCGGCACAAGTCGCGCGACCCGCTCGCGATGGCCGAGGGCGGCAAGATCGGGATGCCCCACTCGA GCAACGACTGCAGCTCGGGCAGCTCGAACGAGGGCAACCTGGACTACGGTGGGACGCGCCTGTCG CTCGATGCGCACCTGAGCAACGACCGGCTGGCGGCGGGGGCGGCCCCGGCCCGGCTGGACGGGCG GCTTACCGGGTCGGCCGAGCTGAAGCTGCGGGGCGAGCCGCCGCTGCTGCCCGAGCTGACGAAGG AGAGTGACCTGGAGCGGGACCTGGTGCCTGGGTACCGCAAGAAAACGACCAAAGGGGCAACGAAC GGCAGCCGAGGGGAGGGGCTGGTGGTGGCGGCGGCGTCGACCGCCAGCAGT phase 0 aaab01008846.1 3659611-3659986 - CCACTGTACGATACCAGCGATCTGAAGTCGCTGAAATCGGACGCCGGCGGGGCGGTAGTTCCCGG ACCGGCCGGCTATGATCAGCCGGCGGGGTCGGGGGCCCATCCGCCGGCCACCGGCTCGAACGGGA CGCTCGAGATCTCGCTGCTGTACGATGCGCCGATGCGCAAGATGACGGTGCACGTGCTGCAGGCG CGCGGCATTGCGTCGCGCGGCGACAAGGGCCAGCTGACGCACACGCAGGTCCGGCTGCTGATGCT GCCGGCCAAGCGGCAGAAGCACAAGACCAAGATCCGGTCCGGCGAGTGCCCGCAGTTCATGGAGA GCTTCCTGCTGCACCGCGTCAACCCGGAGGAGGTGAACTCGATGGGGCTGCGCATCCGGGTGTAC GGGTGCGAGCGGATGCGCCGCGAGCGGCTGATCGGCGAGACGATCGTCAGCTTCGCCAACATTGA CCTGGAGCTCGAGACGAACCTGTGGCTGCCGCTGGAATCGCGCTCGTCAAGCACG phase 0 aaab01008846.1 3660229-3660738 - GATACGGCTTCCACGAGCGATCTGCTGAGCATTGCCCGGTCGGACAGTGCCGGTTCGACCACCTC CATGCAGCATGGCGGTGTGCCGGAGCTGCTGCTCGGGTTGGGCTACAATGGCATTACCGGGCGAC TAACGGTGGAG phase 0 aaab01008846.1 3660833-3660973 - ATCGTAAAGGGTAGCCATTTTAGGAACCACACGCTACCCAAAGTCCCGGACACGTACGTGAAGCT CTGCCTGGTCAGCAGCATGGGCCAGGAGATTGCCCGCGCCAAAACGTCCACACGGCGCGGCCAAT CGAACCCACTGTTTAAGGAAACGTTTATCTTTCAG phase 0 aaab01008846.1 3661896-3662060 - GTGGCAATGTTCCAGCTGAACGACGTGACGCTGATCGTGTCGGTGTACGCGAAGCGCAACATGAA GCGCAACGAGATGGTTGGTTGGTTTAGCATGGGCCTCAACTCAAGCGGCCCGGAGGAGATGATAC ACTGGAACGAGATGCGCGAGTCCAGCTCCCGGTCCGAGCTGATCACCCGCTGGCACGTTCTGGTC GACTCCTGA *** aaab01008846.1 3662145-3662348 -------------------------------------------------------------------------------- 13. Drosophila syt1 Dmsyt1 Chromosome 2L Size >19.2 Kb Agrees with Berkeley Drosophila Genome Project gene prediction CG3139 http://www.fruitfly.org Transcript complexity affecting pre-C2A region and C2B Edited positions underlined with changes indicated below MPPNAKSETDAKPEAEPAPASEPAADLESVDQKLEETHHSKFREVDRQEQEVLAEKAAEAASQRI AQVESTTRSATTEAQ^ ESTTTAVPVIKKIEHVGEVVTEVIAERTGLPTWGVVAIIILVFLVVFGIIFFCVRRFLKKRRTKD GKGKKGVDMKSVQLLGSAYKEK^ VQ]PDMEELTENAEEGDEEDKQSEQKLGRLNFK^ LEYDFNSNSLAVTVIQAEELPALDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFK^ SLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLAQTIEEWRDLVSVEGEGGQ^ EKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLS^ DPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQ^ - - - - V R V M KICLVVTVVDYDRIGTSEPIGRCILGCMGTGTELRHWSDMLASPRRPIAQWHTLKDPEETDEILKNMK - AAAACGCGAATGAACATCGACCGTGGAAGTTGACTGCTGAAGTACAAAGCGCTAGGCTGAAG ae003582.3 (265288-265227) - TATACGAAATTCATGTGAGACTAGCGAGCCGCGGCCTCACTAGCCAAAGCCAGTCACAAAAAACCAAA AACATAAATCAGGCAGCAGCAGCAGCACACATACATCGACAAGCGCCAGGACCCGCATCACCATATCC TTCCTGCCAAATAGTCGCCACTGCTGCCGACCCTCCCCGCTCCCCTCGCAGGAGTCACGCTTCGTTAA ACGCTGCTCAAAACCCATCATCCTAACTAATAAAGCGGACGATAAACAAGCGAATTAAGTACCAAAAA CGACCGAGCTATTAACGCTAGTCTGGATCCCAATTGCTGATTGGAAAGGAGAAACATTGGCAGCATTT CTGATTAGGGG ae003582.3 (264154-263804) - CAACAACACAGCAAAACAAAATGCCGCCAAATGCAAAATCGGAAACGGACGCCAAACCGGAAGCGGAA *** CCAGCGCCAGCGTCTGAGCCGGCAGCGGATCTGGAGTCCGTGGACCAGAAGCTGGAAGAAACACATCA CTCCAAATTCCGTGAAGTGGACAGGCAGGAGCAGGAGGTGCTCGCCGAGAAGGCGGCGGAAGCGGCCA GTCAAAGAATCGCACAGGTGGAATCAACAACACGGAGTGCTACCACAGAGGCTCAGG phase +1 ae003582.3 (259226-258966) - AATCCACCACCACCGCAGTGCCGGTGATCAAAAAGATCGAGCATGTCGGCGAAGTGGTCACCGAGGTG ATCGCGGAGCGCACGGGGCTGCCCACATGGGGCGTGGTGGCCATCATCATACTCGTGTTCCTCGTCGT CTTTGGTATAATCTTCTTCTGTGTGCGGAGATTCCTGAAGAAGCGAAGAACCAAAGATGGAAAGGGTA AGAAGGGTGTCGACATGAAGTCGGTACAGTTGTTGGGATCGGCGTACAAGGAGAAA phase 0 ae003582.3 (258905-258646) - GTTCAG]CCTGATATGGAGGAACTCACCGAAAATGCCGAGGAGGGTGACGAGGAGGACAAGCAGAGCG AGCAGAAGCTGGGGCGCCTCAACTTCAAG phase 0 ae003582.3 (258588/258582-258493) - CTGGAATACGATTTCAACTCCAACAGTTTGGCCGTGACGGTGATCCAAGCCGAGGAGCTTCCCGCCCT GGATATGGGCGGTACCTCGGATCCCTATGTCAAGGTGTACTTGCTGCCCGACAAGAAGAAGAAGTTCG AGACCAAGGTGCACCGCAAGACACTGAGTCCGGTCTTCAACGAGACGTTCACCTTTAAG phase 0 ae003582.3 (257994-257875) - AGTTTGCCCTACGCCGATGCCATGAACAAGACGCTCGTGTTTGCCATTTTCGACTTCGATCGCTTCTC GAAGCACGACCAGATCGGCGAGGTGAAGGTGCCGCTGTGCACCATCGATCTGGCGCAGACAATCGAGG AGTGGCGCGACCTGGTCAGCGTTGAAGGAGAGGGCGGACAG phase 0 ae003582.3 (257689-257513) - GAAAAGCTGGGAGATATCTGCTTCTCGCTGCGCTACGTGCCGACCGCCGGAAAGCTAACCGTCGTCAT CCTAGAGGCCAAGAACTTGAAGAAGATGGACGTGGGCGGATTGTCTG phase +1 ae003582.3 (252486-252372) - ATCCATATGTGAAAATTGCAATCATGCAAAATGGCAAACGTTTGAAAAAGAAGAAGACAAGTATCAAA - g - g - g AAATGCACCCTCAACCCTTACTATAATGAGTCGTTCTCATTTGAAGTACCATTTGAACAAATACAA - g phase 0 ae003582.3 (250990-250857) edited positions underlined, edits indicated in lower case - AAAATCTGTCTCGTTGTGACCGTCGTGGACTACGATCGTATTGGCACCTCCGAACCCATCGGCCGCTGC ATACTTGGCTGCATGGGCACCGGAACCGAGCTGCGTCACTGGTCGGACATGTTGGCCTCGCCCCGCCGG CCCATCGCCCAGTGGCACACCCTCAAGGATCCCGAGGAGACCGACGAGATCCTGAAGAACATGAAGTAA GGCGGCAACATGGATAACCAAATGCAG *** ae003582.3 (248592-248359) - ACTTACAGCACATCTATCAAACGTATAAATGTAACCAAAGAACATGTACGCGAACCGTCAGACATTGAA ATCGAATGCATCATCATCAGCTACAAAACGATCCTCCTCACCCGAAACGACAAGCAACAATCAGCGAAA TATCGTAGTTAATGCAAAAATTGTTCATCTATGCAGTTATCTCAACATAAACATACTGGAACACACAAA ATGCCGATTAAGTAATACCATAGGTGTCTAAGTTATATCTCATTGGTTGCGAAAGCAAAGCGAAGTGAA AGCTATGAAATCCTATATAGAAAGCAATGTGCAATGTGTCCCTTTCACTGGCCGGAATCCCAAATAGTT CGATCGATTTTACATATAAATCCACACATGAATTCATTCCGAGATCTATGAATTTGTTGTTGTCCCAAA CTATGAAATTTACGAGTATGTTCTTATTAAATGCAAAACTCTATATACTCAAACTATTTAACGGATGAC CGCGAGAGTATGATTTTTAAAGGTTAAGTTTACTTTCGTTTTTAACTTAGTGCAATGATTAAAGGGATC TTTCCGGTTTTAAATTTGTTTTTCAATCGTTGAAAGATTACTAGTGAATAATATTACTGACTAATGAAT ATATAAACAAACAAGCAAGCAAAACAAGAACGTAAAGGCAACTTAAACTGTTATGTAAATTATTTATTA TGTTTATTGAGCATTACGTACTTAACTGTGTAAGTATTAATCTATGTGTGTGTTTAAACGAAGTGAACA TGGCAGACATATTAACATGAGGACGGAAGGGAAATCATAAAATATATATTATATATAAATATTATGTAT AACGACCTAACAGAATCAGACGAATAAGTAGAGGGGAAACCAAAAAGGAAACCGAAAACCAAAAGCAAA TAACAAAAGTTAAACTTTGAAGCGTGATTTCAACGGAATATATCATCAGTTTAAACTTAAAGAAAATAT CGAACATTTTGCACAATGGATCAGATTGGAATATTCATTTAGTTCGAACAACTTGATTTACGCTAACTT AGTAGAAATATGGCTCAGTTTGGGAAAGGTTTCCATTTCCGATAAGTTTATCCCTCGGTTAGCTTTGAA TTTTCGTTCGAATTCAGATTTTTTGTTCGGTAGCTTCTTCTTCTCGAATATTAAGGTTTCTATTGTACA ACTATCTATGAGTCGTTTTACTCGTTTCCGACTTTATCACATTCCCTGATTTAGAAATCATATTAGGAC CTAATGAAAATATACATACTAACTAAATGATTATGGCAAAATGTTAAAACAGAAAAAGAAATATTAAGA ACAATAATAGTTATTACTATTTATATTATATTCAAGTATATGACATCTAAACAATATACATTTATATAA ACTTGTGCTCCTAGCTGCACAAGCCTACTAAGAATTTGGGATTTTTAATATGGAAAAGCGGCGGCAGCA AAAACTCTTCTACCTACCTAAAACACAAACTAGCTAATTAAGCTAACTAATCGCTCGAGAGCCGAGCAT TCCATTATTTATAATCCGATATTGAAATCGAAATCGAATTCGAGACGAAGGATTAACAGTGAGCCATGA TTTTCTGATTTTTTCCATATTGAAAGTAAATGAAATTCAACTAATACATTAGATGTTTTTGTCCTGTAA ATGGTATATTATAATGATAATGATAAAGATAAAGCGTAGTTAGGGATCTGTGTATCCCCTGTACACCCA CTTACACAGTTGTAGTTATGTTCACTGAAGCAGAAGAGTTATGCGTAGGAGTACACAAAGAACAAAGAA TGCAAACTTACAAATCGAGAAAATACCAAAAATATTTATGTAATATAATTCATCTAAATTTAACAAAAC GACGTGGACGCCAGGAAGAACAAGTTATGCAACTTATTACGAGTATTGTTCAATAAAAATAAATAACTT TGCTTTTCCAAATAATTACTGTAAATTATCTCAAGCCCAAAAACAGCAAAATAAGACACAGATACAAAA TTCACACACACACACACACACCCACAAACACATATGTATTATGTATTAAAGAAATGGTAAATTACTAAC CAAAATCGAAGCCTAACCACAACAGCAAC ae003582.3 (248157-246059) -------------------------------------------------------------------------------- 14. Drosophila syt4 Dmsyt4 Chromosome 3R Size >4.7 Kb Agrees with Berkeley Drosophila Genome Project gene prediction CG10047 MAEEYIPDASVMDT^ IVPAILGLTAAAVLSSVAC ICARQMRLRNKKQSQHDASFPFQPTRRPTAVRSPSGQPPHYLKKSPSPTGGKQMGLLSPM QDQSTSPIAQPNVKYSEEGDGPAQHAEQQNGNQLTVVDGNGLKHSLHNSLHHSPVETIAN GSVTITLDDHSLTNGKELTVTDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPCKGGSS GTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDL QNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALSISKEIQPRSLKIRAQGRG ELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRT LSPVFNESFAFDIPAAE^ GAGASLEGVSLELMLLDWDRVTKNE^ VIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKLNE - AAGAAGCCACTGGCAAAATAAAGTCGAACGGCTGCAGAACTGCGTTGTTGATTTTTTTTCCACAA TTTGTGGATGTGAAAAATATTACAATTTTTGGATATTAATTGTGCAGGACCAGATACAAAAAA ae003672.3 179815-179942 - CCGCCAGGAACATCGAGTGGAAACGTGCTGAGAGCGGCTAAGCCAAATCCATTTAAAATGGCCGA *** AGAGTATATCCCAGATGCCAGCGTCATGGACACGA phase +1 ae003672.3 180550-180649 - TTGTCCCCGCCATCCTGGGACTGACTGCGGCTGCTGTCCTCTCGTCAGTGGCCTGCATCTGCGCC CGGCAGATGCGCCTCCGGAACAAGAAACAGAGCCAGCACGACGCCTCGTTCCCCTTCCAGCCGAC CCGGCGACCGACCGCCGTTCGATCGCCCAGCGGCCAGCCGCCGCACTACTTGAAGAAGTCGCCCT CGCCGACGGGAGGCAAGCAGATGGGACTGCTGTCGCCGATGCAGGACCAGTCCACCTCCCCGATT GCGCAACCGAATGTCAAGTACAGCGAGGAGGGAGATGGACCCGCCCAGCATGCGGAGCAGCAGAA TGGCAATCAACTGACCGTGGTGGATGGTAATGGGTTGAAGCACTCGCTGCACAACAGCCTTCACC ACTCGCCGGTAGAGACGATCGCCAACGGAAGTGTGACCATTACCCTGGACGACCATTCGCTGACC AACGGGAAGGAGCTGACCGTGACCGACCAGTACGGCAAGCTGGGTACCATCTATTTTAAGCTGCG CTACTTGGCCGAAAGGAACGCCCTTATGGTGTCCATCATCCGTTGTCGCGGACTCCCCTGCAAGG GAGGATCGAGCGGAACCGGAGATATTCCCACTGGCATGAATGGACGCACTCAGGCGGCAACGGAT CCGTATGTCAAGCTGCAGCTGCTGCCGGACAAGCAGCACAAGGTCAAGACCCGGGTGGTGCGAAA TACCCGGAACCCGGTTTACGACGAGGACTTCACCTTCTACGGCCTGAACATGAACGACCTGCAGA ACATGTCGCTGCACTTTGTCATCCTCAGCTTCGATCGATACTCACGTGACGACGTCATTGGCGAA GTGGTGTGCCCATTGACCTCCATCGAGATCGGGGACATCTCCAAAGAGGCTTTGTCCATCAGCAA AGAGATCCAGCCACGGAGCTTGAAGATTCGAGCCCAGGGTCGCGGGGAGCTGCTCATCTCCCTCT GCTGGCAACCAGCTGCCGGTCGCCTCACCGTCGTCTTGCTGAAGGCCCGAAACTTACCGCGCATG GATGTCACCGGACTGGCCGATCCGTATGTTAAGATATATCTCCTCTACAATGGCCAACGCATCGC CAAGAAGAAGACGCACGTGAAGAAACGAACTCTGAGCCCCGTTTTCAACGAGAGCTTCGCATTCG ATATTCCCGCCGCCGAA phase 0 ae003672.3 181423-182609 - GGCGCTGGCGCCAGTCTTGAGGGTGTGTCTTTGGAACTGATGCTGCTCGACTGGGATCGCGTGAC CAAGAATGAG phase 0 ae003672.3 182809-182883 - GTCATCGGTCGGCTGGAGCTGGGCGGCCCGAACTCGAGCAGCACCGCCTTGAACCACTGGAACGA GGTTTGCAACTCGCCGCGCCGCCAGATCGCCGAGTGGCACAAGCTGAACGAGTAGGGGAGGGGCA *** GGAACCTCCTGGGCGCAGGCGCCCCTTAATGAGGGGGAAGGGAGCAGGAGCAGGCAACCGAAATG GGAGTCATGTGACCTCGTTGCCACCATGAATTTCTCTTTGGTTTTTGGCATATGATTGCATATTG ATTGAGTTTATTTTCTACTTTCTACTTTATATTTCACTTGATTTCTGGGAGATCACTTGCTTTGA GTTTGAAGCAAGATTAATGCGAGATAATTGGCCGTTAACGCCACAAGCAGAAAAGAAATATTTAC CAAGCAACCACTAACTAAATTAAATGTATTAGAAAATGTTTAGGACCCTAAAAGTGCATGTAAGT GTAAGATAATTCAGAAACATCTCAATATAGACATGTTTAAATATGAGAATAAGCAAGGCAGGGGA ATTCTCAATATATTTTAAACTGACACCGACTTTGTTGCTATATATTCATGTATGATTTTCATATC AAATAGTTGAAGTTATATTTAATGTGCCCACCACTGAAGTTGATTTCCTCAAAAGATATATTATT AACCATACATCTGTATAAAATATTTATGATATCTAACGTTTAAGCATACATATGTCTGTACAATT TAATTTTAATTATTTGAATATTTTAGTTTGATTGTAAAGACCTAAAGTATACCATCGCTTTAATG GATACAAGACATCAAATTTGCACACCCCGGAAGCTCTTAAAGTTTTGTCCAGAACGAAGCAAAGA TAGATGCTTACTGCTTAACACTTTATACGTACTCTTAAAAATAAAAACAAATAACTAAAACTAAT GAAACAAATAAAACTAAACCAAATTGAATCTAGAGAGAACACGCAGCAGAATGCTTAGCACCAAG AAGCTACAAAACCACACACAAATCGATCGAAAAAGTCAGAAAACATTGATTCGGAGAGGAAACCA ACACAATACAATAATGTAAGCAGCATAGTACATGTAGGAATCAATTACCAATAACATACTCTAGA GTATAACCACTCACGAATAGCTCAAACCGAACGCAATAAGCACTACAGGTGTATCTAGCGGCACT ACCTTTAAAGGCAACGGATGGAGGAGACCCCGATGAAAGCATAGCTTAACGAAGACACCGAATCA TTATCCACTACTGATATTAAGTGTACTGAATACAATTATAAACTATACCAGATCTATATAGACAT CAGCCCGCTTCTACGTATATTTTGTAAACTGAGTGTTAGAGCATTAAACTTCATTGAATAACTAC GTGCATACAACCATAAGGATATATACAAGCATACATAGCGATTCGCGAGAATCGCAGATACAACT TCAATTCGTGTCCAATCAAAACTTCAATTCGTCTAATGGAAAAACAATAATTACCAATACATATG CAAAGAGTTTGTGCAGAGGAACCCAAATTATATGAGATGTGTATAATTCTACATTATATGTAATT GTAATTGTAAGCTACATCAAATGGTTAATTTCAGTAATAAAAGGTATTATATAAAACAA ae003672.3 182947-184565 -------------------------------------------------------------------------------- 15. Drosophila syt7 Dmsyt7 Chromosome 4 Size >26.3 Kb Does not agree with Berkeley Drosophila Genome Project gene prediction CG2381 Transcript complexity affecting 5'UTS MASIVLIACLAILGLIITIALFLAGGYLWWRHKRSQLQFIEPNEDEESSSYSL^ RAAQDIVDSGNPPTKPQVPVAHAITTPLQNNINRKLNGFLSLRTPLI^ GGSGASQTKPQIISSVGNPGDGTTKDSA^ NKSISMTDMYLDSTDPSENVGQIHFSLEYDFQNTTLILKVLQGKELPAKDLSGTSDPYVR VTLLPDKKHRLETKIKRRTLNPRWNETFYFEGFPIQKLQSR^ VLHLHVFDYDRFSRDDSIGEVFLPLCQ^ VDFAGKQSFWKALKPPAKDKCGELLSSLCYHPSNSILTLTLIKARNLKAKDINGKS^ DPYVKVWLQFGDKRVEKRKTPIFTCTLNPVFNESFSFNVPWEKIRECSLDVMVMDFDNIGRNELIGRILLA^ GKNGSGASETKHWQDMISKPRQTVVQWHRLKPE - start1 AAGATAACTATTGCTGTATCATCAGTGGGGTGTTTAAATGTA ae003844.4 (152406-152365) - start2 TGTATTCGACGTGTTTTCATTGGCATAA[GTAGCTCGATATTAACTTAAACGACATATTGTTTTAG GAATAAAGTAGTTTTAAAGTAAAATACAGTTTTTGCCGTTATTTAAATTCAAAGGAAAGACTCAAA TTT ae003844.4 (151739-151712/151606) - ACATGGCAAGCATAGTACTTATAGCTTGCTTGGCTATATTGGGATTAATTATTACAATCGCTCTTT *** TTCTGGCTGGAGGATACTTGTGGTGGAGGCATAAAAGATCACAGTTACAGTTTATTGAACCAAATG AAGATGAGGAATCTAGTAGTTATAGTCTTCG phase +2 ae003844.4 (151103-150941) - GGCTGCTCAGGATATTGTTGACTCTGGTAATCCACCTACAAAACCGCAAGTGCCGGTGGCACATGC TATCACGACTCCTCTCCAAAATAATATTAACAGGAAATTAAATGGATTTTTAAGTCTTAGAACTCC TTTGATTGG phase +2 ae003844.4 (148450-148310) - CGGGTCGGGGGCCTCTCAAACAAAACCGCAAATCATTTCTTCAGTTGGAAATCCTGGAGATGGGAC TACGAAAGATTCTGCA phase 0 ae003844.4 (148247-148166) - AATAAAAGTATCTCAATGACAGACATGTATTTGGATAGCACCGATCCAAGTGAAAATGTTGGGCAA ATACATTTCTCCTTGGAGTATGATTTCCAAAACACAACATTAATTTTGAAAGTTCTTCAAGGAAAA GAGCTTCCAGCAAAAGATTTGAGTGGTACTTCCGATCCATATGTTCGTGTAACGCTGTTACCAGAT AAAAAGCATAGATTGGAAACCAAAATAAAACGGCGAACCCTTAATCCACGATGGAATGAAACATTT TATTTTGAAGGTTTTCCAATTCAAAAACTTCAATCACGT phase 0 ae003844.4 (128662-128360) - GTTTTACACTTACATGTTTTTGATTACGATCGGTTTTCAAGAGATGACTCCATAGGGGAAGTATTT CTTCCTTTATGTCAG phase 0 ae003844.4 (127952-127872) - GTTGACTTTGCTGGAAAACAATCTTTTTGGAAGGCTTTAAAGCCCCCTGCAAAGGATAAATGCGGA GAACTTCTCTCCTCCCTTTGCTATCACCCGTCGAACTCAATTTTGACTTTAACACTAATTAAAGCG AGAAATTTGAAAGCCAAAGATATCAACGGAAAATCTG phase +1 ae003844.4 (127816-127648) - ATCCATACGTAAAGGTGTGGCTACAGTTTGGCGATAAAAGGGTAGAAAAAAGAAAAACGCCTATAT TTACGTGTACATTAAATCCAGTATTTAATGAATCCTTTAGTTTTAACGTACCATGGGAAAAAATAA GAGAATGTTCTTTGGATGTTATGGTGATGGATTTTGATAACATTGGAAGGAACGAGTTAATAGGAC GAATACTATTAGCTG phase +1 ae003844.4 (126461-126249) - GAAAAAACGGTTCTGGAGCATCGGAAACTAAACATTGGCAGGACATGATCTCAAAGCCCAGACAAA CTGTAGTACAATGGCATCGCTTAAAACCTGAGTAA *** ae003844.4 (126163-126063) -------------------------------------------------------------------------------- 16. Drosophila Chromosome 2L Size >2.3 Kb Agrees with Berkeley Drosophila Genome Project gene prediction CG5559 MDIVIREEDISLAQIGVYASVSFLVVSAVGAALYTTCSKRYRLNWFEQNLLESANEKDEDQQR^ EALVAGAVGYNVDNVNEVPRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVTSTAAIQQQ VSNTTEESAPPTSPTGSLKSNTLSYCSTTSVPIARSDKHVVLAMHPSRPRVSSMNAKLDH TKIDMTLYRS^ HSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLL PDKKNFWQTRIHKRTLNP^ VFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSS ASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGK KIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLL^ GSSEILGRTLIGNSPEVRTEEKIFFEEVFRAKNATAQWVPLQEPANNLATSAKSSKN - ATGGACATTGTCATACGTGAGGAGGACATTTCTTTGGCCCAAATTGGCGTCTATGCCTCTGTGT *** CCTTTCTCGTTGTTTCTGCAGTTGGGGCAGCGCTGTATACCACCTGCTCAAAACGCTATCGCCT GAACTGGTTCGAACAAAATCTCCTGGAGTCCGCCAACGAAAAGGATGAAGATCAGCAAAG phase +2 ae003655.3 216548-216735 - GGAGGCTTTGGTTGCCGGTGCCGTGGGCTACAATGTGGACAACGTGAACGAGGTACCGCGTGGG AAATACAGCAGCGGAAATGCCGGTAACCTCAGCCCCACCTCTCTGAAAAGCGAGGACAATGACC CGGCCTTTTGGGTGCCGGCTTCAGTCACCTCCACGGCAGCCATCCAGCAACAAGTGTCCAATAC CACCGAGGAGTCCGCACCGCCAACATCACCCACCGGGAGCCTGAAGTCAAACACCTTGTCCTAC TGTTCCACCACCTCCGTGCCAATCGCGAGATCTGATAAGCATGTGGTCCTTGCTATGCATCCGA GCCGTCCCAGAGTTTCCTCTATGAACGCCAAGCTGGATCACACCAAAATCGACATGACCTTGTA TAGAAGT phase 0 ae003655.3 217040-217430 - CATTCTCAGCCGAAGACTATCAATCCAGTTTCACTCAACGAAGTTCGGGGTAATTTGCATGTGA GTCTTGGCTACGATCCAGTTGGAGGATTGCTAAATGTTCGACTCCTGGAGGCCCAGAATCTGCA ACCGAGGCAATTTAGTGGAACTGCCGACCCATATGCCAAAGTCCGCTTGCTGCCGGATAAAAAG AACTTTTGGCAGACGCGTATACACAAGAGGACCCTGAATCCAG phase +1 ae003655.3 217499-217733 - TTTTCGACGAGCAGTTTGTTTTTGAGGTAACAGCCGGAGTAATTGACAAGCGTACTGTGGAAAT TTTACTATACGACTTTGATGCTTATTCCCGGCACGTTTGCATCGGAGGAAGTAAGCTACATTTG GCCAACTTGGATCTCAGCGAGCAATTGAAGTTGTGGACTCCTCTTAGTTCTGCCTCGGCCCAAG ATATGAAGGTGGATTTGGGCGATATAATGGTGTCCCTAGCCTATTTGCCATCAGCGGAGCGTTT GATGGTCGTCCTTATCAAGGCACGAAACCTGCGGATTGTCGACGATGCCCGGAACTCCTCGGAC CCTTATGTAAAGGTAACCCTCCTCGGTCCCGGTGGCAAAAAGATAAAGAAACGCAAGACGGGCG TTCAAAGGGGCACCCTGAACCCAGTCTATAATGAGGCTCTTGCTTTCGATGTGGCCAAGGAGAC TTTAAAAAACTGTGTACTAGAATTCACCGTAGTCCACGATGGCCTATTGG phase +1 ae003655.3 217793-218290 - GATCAAGTGAAATATTAGGACGAACTCTCATTGGAAACTCTCCGGAAGTACGCACCGAGGAAAA AATATTTTTTGAAGAAGTTTTTCGTGCCAAAAATGCTACGGCTCAATGGGTTCCACTGCAAGAA CCGGCAAACAATTTGGCCACATCGGCCAAAAGTTCAAAGAACTAG *** ae003655.3 218703-218875 -------------------------------------------------------------------------------- 17. Drosophila syt13 Dmsyt13 Chromosome 3L Size >7.1 Kb Agrees with Berkeley Drosophila Genome Project gene prediction CG3020 MSGLGPAACWLAHKRIESWSRMAKERVGAVRRVTLDRNSADEGTPSGSGASSTAGGNGVS VVHILPIGEGSTTPPPQPMTPPPSASSVTSTTSGIGSVSAGSVSDSCDLPTDSE^ EVAIAKECQPIQPASQLHGMHGGMGLNHHHMGTVSATGTDILRGPAEVFHSPLHLHHQSR SFPPRLQRTPSISSQSSVDSAPSRHS^ GHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPSPMRTISLDARCGSPAHSADPGDLRT PSPSQSSLASLAGGSGMGGSSAGKGVAGGRCLSPLLIPPRSQPGVDPAMGPASPLGALQP DLYRMPDGPVYLTAPESSHAVGRLHLRVKYDYHLFDLTVHLIE^ AHNLSPIEEGGFRDPYVRLMLQPEVDSRKRQTHIHRGESNPYFDQHFKFPVSRDQLQGKE LILQVLDYDRYSHNDIIGEVRISVDGLDLSKSVE^ IWGDLLRTKKPKEDRPELLCSLNYLPQAERLTVVIMKARNLDTLQEPYVK^ IYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTFNLQSNYLHNAAIE^ IYVVGAGSEATEIGCCGLGPQESGTGCQHWHDMINNARKPTAMWHYIR - ATGAGTGGTCTGGGTCCGGCAGCCTGTTGGCTGGCCCACAAGCGCATCGAGTCCTGGTCGCGAAT *** GGCCAAGGAGCGAGTGGGAGCGGTGCGTCGCGTTACTCTCGATCGGAATTCGGCGGATGAGGGGA CACCGAGTGGGAGTGGTGCCTCCTCCACTGCCGGGGGCAATGGGGTTTCGGTGGTGCACATTCTG CCGATTGGCGAGGGCTCCACCACCCCACCGCCGCAACCCATGACCCCGCCGCCGTCGGCCTCGTC GGTCACATCGACCACCAGCGGAATTGGCAGCGTTTCAGCCGGTAGTGTCAGCGATAGCTGTGATT TGCCCACGGACTCGGAG phase 0 ae003532.3 (97756-97415) - GAGGTGGCTATTGCCAAGGAATGCCAACCCATCCAGCCGGCCAGTCAGCTGCATGGAATGCACGG CGGCATGGGCCTAAACCATCACCACATGGGCACAGTTTCGGCCACCGGAACGGACATCTTGCGCG GACCCGCCGAAGTGTTCCACAGTCCGCTTCACTTGCATCACCAAAGTCGCTCCTTTCCGCCGCGC CTCCAGCGCACGCCGTCCATCTCCAGCCAGAGCAGCGTGGACAGCGCCCCATCCAGGCATTCG phase 0 ae003532.3 (97347-97090) - GGTCATCGAGGCTCTTCACCACAGATAAGGACTTTTGGACCAGACGGACGAAGCTCGCTGCCAAG TGAGCCTGGATTTCCGCACCATTTGGCCAGGTCACCCAGTCCCATGCGAACCATTTCTTTGGATG CTCGCTGCGGCAGTCCCGCCCACTCGGCGGATCCTGGTGATCTGAGGACGCCCAGTCCCTCGCAG AGCAGCTTGGCATCTTTGGCCGGTGGATCGGGAATGGGAGGCAGCAGTGCGGGAAAGGGCGTGGC TGGAGGTCGTTGCCTTTCGCCGCTGCTAATACCGCCCAGATCGCAGCCCGGAGTGGATCCCGCAA TGGGACCCGCTTCTCCACTGGGTGCCCTTCAACCAGATCTCTATCGAATGCCGGACGGACCCGTT TACCTAACAGCTCCGGAATCCAGTCACGCCGTGGGTCGTTTGCATTTGCGCGTTAAGTACGACTA CCACCTGTTCGATCTGACGGTTCATCTGATTGAAG phase +1 ae003532.3 (97020-96531) - CTCACAATCTCAGCCCCATCGAAGAGGGTGGATTCCGGGATCCCTATGTCCGCCTGATGTTGCAA CCAGAAGTGGACAGCCGGAAGCGACAGACCCACATTCACAGGGGCGAATCCAATCCCTACTTTGA CCAGCATTTCAAGTTCCCGGTTTCTCGGGATCAGCTCCAGGGCAAGGAACTGATCCTCCAAGTGC TCGACTACGATCGCTATTCGCACAACGACATTATCGGCGAGGTTCGCATCTCTGTGGATGGCCTA GATCTCTCCAAGTCAGTGGAG phase 0 ae003532.3 (95950-95670) - ATTTGGGGAGACTTGCTGCGTACCAAGAAACCCAAGGAGGATCGACCGGAACTGCTGTGCTCCTT GAACTATTTGCCGCAGGCCGAGCGATTGACGGTTGTCATTATGAAGGCTAGAAATTTGGATACTC TTCAGGAACCATATGTCAAG phase 0 ae003532.3 (95612-95463) - ATTTATCTGATTCAAAATGGCAAACGCATCAAGAAGAAGAAGACGAGCATTACAAAGTCGGACGA TCCCACCAATCCCATTTGGAACGAGGCGTTCACGTTTAATTTGCAATCAAATTATCTTCACAATG CAGCCATCGAG phase 0 ae003532.3 (95365-95225) - ATCTATGTGGTGGGTGCCGGGAGCGAGGCCACGGAAATCGGATGCTGCGGACTGGGCCCCCAGGA AAGTGGAACTGGATGCCAGCACTGGCACGATATGATTAACAATGCCCGAAAACCTACGGCTATGT GGCACTATATCCGCTAG *** ae003532.3 (95017-94871) -------------------------------------------------------------------------------- 18. Drosophila syt12 Dmsyt12 Chromosome X Size >8.9 Kb Agrees with Berkeley Drosophila Genome Project gene prediction CG10617 MMSFTITLALLLLAVLILGILFACHCLGPRAANWMRMRSSKEEKIGLSNHKQKLFHANGYMAS^ IQSGSEFLLSTSGSFKRFDTIDKEDYNRSQQTHQTHLFLMNGGGAVSITGSSSALQATTA MWHLPRSGIKIPPPPDRPAPSPNSAAAAGKTVTFSLSQVNEVIMPGEQVTSNDQERRSCL RQNGGTAGGAGGGGVLPQPLEAPPPPRLTASTSVNLSGTAIPRPIAKRQVSTQPANNSGC QPEQTVVTPMREGERKAPALKRRNSSTNPFLCESTEQIPSNPISEPLNATVASLEKTTIS TSECTPITAPLETPNGPISTDTPSTIHHNGNPFVERESLSSRLLKIHNTTNPFTGLSQRV KGPHLLQKTISEDYLFRKLGVNCPMANGNGTGPGSGHVNGNGNGTWSFGRSLLRQDSTLS LGMGLGRRNSSQVSLDSHAGSVPGSMDGINLERAISCDSVTSDSTLFLDQLDQPYTQITG YLCVGLNYD^ QMSISNEGMELTVSVLEAKGLICPFSVESLDTFVRIYLVPDHPGAMQTK^ VVKGTLTPSYNESFDFWLHKRQARHSLWFHLYHNGPAHTLIGEAEMEIGEMPRPITTWIP LSDSRKCNARWGELMFSLSYLPTAERLTIVVVKARNLKLDGEQPAPESAETVHSVFVK^ VYLMDKDRKVLKKRTSLKRKDRSPIFNESMIFSVPPPSLTTTQLRVTVFGVTTSGVTPLG HIVAGSCAVGKGLRHWHQMLSSLRKPVAMWHVLRRAVNQPIFTGGAEAVVAAMQNTLQRS TAKRNSIV - AGTTGGCCGCGAGTTTTGGC ACCGAACGGTCTACGAAAATGAGCGAATTTTCCGCCCGCACTTCCGCTTCCTGCTCTTCCTCTTTC CGCAGCGTTACTACTTGTTATTATTTGTATTGTTAAATCAGAGTGATAAACTAATATATTTGCCAT TTAAATGTGGCCAAATGATCAGCAAGGATAAGTAAG ae003492.3 100720-100907 - AAGAACGGAGAGATGCATCACGATTGGTAAACGAATGGCACTCGTTCGGATATGATGAGCTTCACC *** ATTACCTTGGCGCTACTGCTCCTGGCAGTTCTGATCCTGGGCATCTTGTTCGCCTGCCACTGTCTT GGTCCGCGGGCCGCCAACTGGATGCGTATGCGATCCAGCAAGGAGGAAAAGATCGGACTATCCAAT CACAAGCAAAAGCTCTTCCATGCCAATGGTTATATGGCCAGT phase 0 ae003492.3 104711-104950 - ATACAATCCGGCTCCGAGTTCCTGCTGAGCACCAGTGGTAGTTTCAAGCGTTTCGATACCATCGAC AAGGAGGACTACAATCGCTCCCAGCAGACGCATCAGACGCATCTGTTCCTGATGAACGGCGGCGGT GCGGTTTCGATAACCGGATCATCCAGTGCCCTGCAGGCCACCACGGCCATGTGGCATCTACCGCGT TCGGGTATTAAGATTCCACCACCGCCCGATCGACCAGCTCCATCTCCGAATAGTGCTGCAGCAGCC GGCAAAACGGTTACCTTCTCTTTGAGCCAGGTAAACGAGGTCATCATGCCCGGCGAGCAGGTGACA TCCAACGATCAGGAACGTCGCTCCTGCCTGCGACAAAATGGTGGAACTGCGGGCGGTGCTGGCGGC GGTGGTGTGCTGCCGCAGCCACTGGAGGCACCACCTCCGCCACGACTCACCGCATCGACGTCGGTG AACTTATCGGGTACGGCGATTCCAAGGCCCATTGCCAAGCGGCAAGTGTCCACGCAGCCGGCCAAC AATAGCGGATGCCAGCCGGAGCAGACCGTGGTGACCCCGATGCGGGAGGGTGAGAGAAAAGCGCCT GCCTTGAAGCGTAGAAACTCCAGCACTAATCCCTTCCTGTGCGAATCAACGGAGCAGATACCCAGT AATCCCATTTCTGAACCTCTGAATGCCACGGTGGCTTCTCTGGAAAAAACGACTATTTCAACAAGT GAATGTACTCCTATAACTGCTCCTCTAGAGACTCCAAATGGGCCTATTTCAACGGATACTCCATCC ACCATACATCACAATGGCAATCCCTTCGTGGAGAGAGAAAGTCTGTCCAGCAGACTCCTGAAGATC CATAACACAACGAATCCTTTCACGGGACTCTCGCAACGCGTCAAGGGTCCGCATCTACTGCAAAAG ACCATTTCGGAGGATTATCTATTTCGGAAATTGGGTGTCAATTGTCCGATGGCCAATGGCAATGGT ACGGGACCAGGATCTGGTCATGTCAACGGAAATGGCAATGGAACTTGGTCCTTTGGACGCTCCCTG TTGCGACAGGACTCCACATTGAGTCTGGGCATGGGCTTGGGCAGAAGGAACAGCTCCCAGGTATCC CTGGATTCACATGCGGGATCGGTGCCCGGTTCAATGGATGGCATCAATTTGGAGCGAGCCATCTCC TGCGATTCGGTAACCTCGGACTCCACTCTATTCCTGGATCAATTGGATCAGCCCTACACTCAGATA ACCGGATATTTATGCGTTGGCCTTAACTACGATCA phase +2 ae003492.3 105054-106342 - GATGAGTATTAGCAACGAGGGCATGGAACTGACTGTTAGTGTCCTGGAGGCCAAGGGACTCATATG TCCATTCAGCGTTGAATCCCTGGACACCTTTGTGCGCATCTACTTGGTGCCGGATCATCCGGGAGC TATGCAAACTAAG phase 0 ae003492.3 106401-106545 - GTGGTCAAGGGAACACTGACACCCAGCTACAACGAAAGTTTCGATTTCTGGCTGCACAAGCGACAG GCGCGCCATTCGCTGTGGTTCCATCTGTACCACAATGGACCCGCCCACACGCTCATTGGCGAGGCG GAGATGGAAATTGGTGAGATGCCACGCCCCATTACCACATGGATACCACTGTCCGATTCGCGCAAG TGCAACGCCCGCTGGGGCGAGCTAATGTTCTCTCTAAGCTATCTGCCCACGGCGGAAAGACTAACC ATCGTCGTGGTCAAGGCACGGAATCTCAAGCTGGACGGTGAGCAACCGGCTCCGGAATCCGCGGAA ACGGTGCACAGCGTCTTCGTTAAG phase 0 ae003492.3 106610-106963 - GTCTACCTGATGGACAAGGATCGCAAGGTGCTAAAGAAGCGCACCTCACTGAAGCGCAAGGATCGC AGTCCGATCTTCAACGAATCGATGATCTTCAGTGTGCCGCCACCCAGTTTGACCACCACCCAGCTG CGGGTGACCGTGTTCGGGGTGACAACTAGTGGGGTGACCCCGTTGGGTCACATCGTGGCCGGCAGC TGTGCGGTGGGCAAGGGATTGCGCCATTGGCACCAGATGCTCTCGTCGCTTAGGAAACCGGTGGCC ATGTGGCATGTCCTGCGGCGTGCGGTCAATCAGCCGATTTTCACGGGCGGCGCCGAGGCGGTGGTG GCCGCCATGCAAAACACCCTGCAACGCTCCACCGCCAAGCGGAACAGCATCGTCTAGATAGAAGTC *** TCGCGAAGATCACAGACGGCGACGACGGCGGCGGCTCACATCAACGGCGAAATTTTCTGCCTCACT GACGACACTAACTGCACCGCCCTTTTAATTTGGAAAAACCCCTTTCGTAGAAGAGATATACCTTTT TTGGGGGGGAGAAGAAGAAAAGAAGAGAACGACGAAAAAAACAGAAGAAAACCTTGTGGAAAATTG CATTTACCACACTCTAGCCATGAGACTTTCTTACTTTTCTACTGCTTACGAACACACACACAACCA GAAGTATTATTATGTAATCTAAAAACCCGCACCAAAGGACAAACGATCCACTTAACTAGTAACCTA GCTACCCATATTTGAGCGCACTAATTGTTATGAACCGATTTTTATTGAACCGAGTATATCTTATAT GATGATGCAACCTCGATCTGAAAAACGAAAACAAAAGAGTCCACACACTTGTTGAAATTTGTCGCA TACAGCGAGCGAAATAATTGCATAAACTGGCATTATCTATCTATTAGATATTATTTCTATATAGCA TATTTATTTCCATTCTTGTTTATGGAAACAGAACATTTGTAGATGTGTGTCCCAAAAAGGGCCTGT TTATCTTACTTGGCTACATTTCAGAGCTCTCATATTATTTTACCATTTCAAATCATCTGCCACTTG GCAGCTCAAATTTCCCACTTTAAGTTCCATTCTCGTTGGGTAAATCCAATGAAAACTGATAGATAG AGATCGTAATGGAGTAAAATCAATAATGATAGCATTGATAAAGCCAATGGAAATACAATTATTTCG CGAGCTGTATGGTTTAGCCTAGCGACCAGTGAGCCTGTTATATTAGAACTCTATAGATAGATCGTC GTTTGGCAATCAAACGTTGTTGAATTTGAAGCCCAAATCGAAATCGAGAACAAAACTCGATAACCG ATAATCGATAATCGAGAATCGAGAAGCGGCGAGCCCTTTAAGCATTGTGATATGATATAATAGCAA ACGAAGTGAATTCAGAGTGCGTCTGTGTCAAGAGCGGAGAATCGTATCGAAGGAAATCAAAGTATT TACGATAGCTACAATCCATAGTCGATATAAAATATTAATAATAATACTAATAATATTATTGATGAT ATATAGGTACCATATGTAATGTTTGTACTTTTGTGATTTGTGTTCGTTCAAATTTTTTGTAGGGCC GCGTGTTTTGTAATTTAGATTTAGTTGGTTCAAGGATCAAAACTTTTTTAAGCGAATGTTATATAT ATACACGCACCGTTAATACACACATAGATTTCAATTTAGAGAACGTTTTTTAAACAGTAAAGGACA ATAACTTTGCAAGCATTTACCATATGATTCCATGTTAAACACAAGTAATTATAATTACCAAACATT AAACAAAAGTTCGTTGTTGGTCCCGTTTTAACATGAACCGATTGTCCGCTACAACCTTATAATATA TGATGATCATAATGTATATGATCCTGAGACCATAATAGAACGCACTCGAATACACGAATAGTACTT TCCTAGTCGCACCTGCATTTTGACCAACCAACCAATCGAATCGAAAACCTGGCACATTTCTAGCTC AAGCTTTAATCAATGTAATCCTCTAATAGAACTCAGTAACGTTTTTGAATCACACTTACTAAATGG ATATAAAATACATATATGTATGCAGAGGGACAGTGCGTTTCACAATTGTATGAAGTGAGATAATAG CATTTATTCATTCGGTTCGAAGAACACAATTTCCCATTTGACAACTTTTTGCGGTAAGTTCGATTA CATATCCTAATTAAAAACAGCTGGCTGAATTCGAAATTATTTGACAATCGCCAACAGTTGGCCATC ATTTGTTCCGAAATTTAAAAGATTGTTACTTGTGAAACGCGCTGCACCGTATATATAAGCATATAT GTATATATTTACACAAAAAATATATAAAGAAGGCATTTAAAAGGCATTAAATGGAAAGTCCTTTCA CCTAAAAACTTCTAGTATATAAATCGCTGAGAATTTTTTTTTCTTTTTTTTACGTACTATTAGCTA ATGAAACGATATGGCTAAACTCGAGTTGAATTTGTATTTATACGGAAATATATATATACATATATA TATATGTGTGTACGTGCTATATAAGATAATGAATGCTACAAATTGTTATACACGTAAACCGAAATT GACTCAAATAAACGAATAAAGATATTAAACGAA ae003492.3 107045-109651 -------------------------------------------------------------------------------- 19. Drosophila syt16 Dmsyt16 Chromosome 3R Size >3.1 Kb Agrees with Berkeley Drosophila Genome Project gene prediction CG9778 MIVTSASGLDSTPTL^ GTIEVTTLLGAFFGVLVLLLLLFLFISRKCCFHYRHAINCCDERHLAVKCVQKI^ TRKRRYENTSSDSEEDILRRLRWHQQHQLGEKPGGYGLGISQANPLTAQSFNYHQAGASA DLQRVTVSRDPLAIAERGKVGIPSSHSECSSNDSMEVSVDSHTGVLTGLSK^ ATTTVPHPATAFRNPCGEHRAKTQALRYQHRVNVAAPPKLDKERDNVLVVPMVNAYSINN NNNSITTSNNHPSSNNNDD^ EPLFDTSDLRSIKSDDLLVGVDQKEPAVQRGPIELELSLLYDAPMRKMTVHVMQAKNLPP LGSGQTTHTQVRMLMLPSKKQKLKTKIRSGENPQYMESFLLHRVNPEDVNNMGLRVRLYG CERLRKERLIGEAYVSFATVDLELETNLWLPLEPRNTSSGLGSTSDLLSLARSESAGSTS SMQHGGVSELLLGLSYNGVTGRLSVEIIKGSQFRSLSLNKAPDTYVKMVMVSSIGQEISR AKTSIRRGQPNPLFKETFAFQVALFQLNDVTLMISVYAKRHMKKNEMVGWFSLGLNSSGS EEVAHWADVCEMPKGEMLARWHVLVDS - TTGCTTTCACGCTGCAGTGAGAATAATTTTTAGTGACTTGACTTGTGGTCCGGGTGCAATGAGTT GCGAGTAGTAGACTCGTGTTCGCCAGGATCCTCGCATGAGCCAAGATGATTGTTACCTCCGCTTC *** TGGACTGGATAGCACTCCGACGCTCG phase +1 ae003606.3 (49777-49622) - GCACCATCGAGGTGACCACTTTGCTGGGCGCCTTTTTCGGCGTCCTCGTTCTACTGCTCCTGTTG TTTCTTTTCATCAGTCGCAAGTGCTGTTTTCACTACCGCCATGCCATCAACTGCTGCGACGAGCG CCACCTTGCAGTCAAGTGTGTGCAGAAGATCA phase +1 ae003606.3 (49549-49388) - CCCGCAAAAGGCGTTACGAGAACACCAGCTCCGACTCGGAGGAAGACATCTTGAGGCGCCTGCGG TGGCATCAACAGCACCAACTGGGCGAGAAGCCTGGCGGATACGGGCTGGGAATCAGCCAGGCTAA TCCGCTGACGGCGCAGAGCTTCAACTACCACCAAGCAGGCGCAAGTGCCGACCTGCAGCGTGTGA CGGTGTCGCGTGACCCCTTAGCCATCGCCGAGCGTGGCAAGGTTGGAATCCCGTCATCGCACAGT GAGTGCAGCTCGAACGATTCCATGGAGGTCTCCGTGGACAGTCACACAGGCGTCCTGACGGGTCT GAGCAAAG phase +1 ae003606.3 (49328-48996) - CCACAACCACAGTTCCCCACCCGGCGACAGCCTTCCGCAATCCGTGTGGAGAACACCGGGCCAAG ACCCAGGCACTGAGGTACCAGCACCGGGTCAACGTGGCTGCTCCGCCAAAGCTGGACAAGGAACG GGACAACGTGCTGGTGGTGCCCATGGTCAATGCCTACAGCATTAACAACAACAACAACTCGATAA CAACCAGCAATAACCATCCCAGCAGCAACAACAACGATGAC phase 0 ae003606.3 (48929-48694) - GAACCCCTATTTGACACCAGCGATTTGCGCTCGATCAAGTCGGATGACCTACTGGTTGGTGTGGA CCAGAAGGAGCCGGCCGTGCAGAGGGGTCCCATCGAGCTGGAGCTGTCGCTGCTGTACGACGCCC CAATGCGGAAAATGACGGTGCACGTGATGCAGGCAAAAAATCTTCCGCCCCTGGGTAGTGGGCAG ACCACCCACACGCAGGTCCGGATGCTGATGCTGCCAAGCAAAAAGCAGAAGCTCAAAACCAAGAT CCGTAGCGGCGAAAATCCACAGTATATGGAGAGCTTTCTTCTCCATCGCGTCAACCCAGAAGATG TGAACAACATGGGGCTGCGTGTGCGGCTTTACGGCTGCGAGCGGCTGCGCAAGGAACGCCTGATT GGGGAGGCGTATGTGAGCTTCGCCACTGTTGACCTTGAACTGGAAACAAACCTATGGCTGCCGCT GGAGCCACGAAACACCTCGTCGGGCCTGGGTTCTACTAGCGATCTGTTAAGCCTGGCTCGGTCAG AAAGCGCGGGCTCCACCTCGTCCATGCAGCACGGGGGCGTCTCCGAGTTGCTGCTGGGTTTGAGC TACAACGGGGTCACTGGGCGTCTGAGCGTCGAGATCATCAAGGGAAGCCAGTTCCGCAGCTTGTC GCTGAACAAGGCGCCCGACACGTACGTTAAAATGGTTATGGTCAGCAGCATCGGACAAGAGATCT CCCGGGCCAAAACGTCAATCCGCAGGGGTCAGCCTAACCCGCTTTTTAAGGAGACATTCGCCTTT CAGGTGGCCCTGTTCCAGCTCAACGATGTTACTCTGATGATCTCTGTGTACGCCAAGCGGCACAT GAAGAAAAACGAGATGGTCGGCTGGTTCAGCCTGGGTCTGAACTCGTCCGGATCAGAGGAAGTGG CCCATTGGGCAGACGTGTGCGAGATGCCCAAGGGAGAGATGCTGGCGCGTTGGCATGTGCTGGTG GACTCCTGATTCGAGCAGCTGGGCCAGTCATCCGGACGCAGCGGAAAGGCCCTCCGAAAGCTGAG *** TCTCGCTGCGTTCAAGGACCGGTCCCGCGAGAAGAGCTCAAAGGAGTCGCGTCTGGAGGAGAACG GAGCTCAATTCCATGCAGCGGTTGCACTTGATATTGAGCCAGGCCTGGAGCTGGACTTTGTCTAA AGCAGAGGTCTGTGTTTGTGATTTGTTTTTACAAGGTCGATGCCAAATGACGACTGCTGTCGTCA AGTGCTTGGCTCAGGATGAGACCGACCAAGAGGTAGGGTCATCCGAACAATCTAGCCTAGACTGG GCCATAAAATATTTGTAATTTGGAATCAATTTGGCACACATTTTGTTTATAAAATGTAGGAAATA TGAAATATGAAAGCGAACAAGAATAACCAGAATACTCAAATTTTATACGCAAGTACATACACGAA AAGTACATACCAGTACTTATATGTATAACTACTCGAAATTTGAATTTTATGATTGTTTGTGATAA AGAATACTATATGAAATATCAGAT ae003606.3 (48146-46628) -------------------------------------------------------------------------------- 20. Ciona syt1 Cisyt1 Size >7 Kb Transcript complexity affecting 5'UTS MSLFRKLVKRAEDSSTDPTSDAADAPTTTQPPAPGGDTPEDVLKGAIDNIYSK^ LPSWAWILIAIGAGLILLCVLYCCCKRCCCKKKKKKQEKKGLKNAIDLKSVKNMGDSYREK^ VQPDVDEVDIGEKEDEEEKKLGKLQFSLDYDFQQNN^ LAVGVIQAADLPGMDMGGTSDPYVK^ VFMLPDKKKKQETKVHRKTLNPVFNETFNFK^ VPYNEIGGKTLVFAVYDFDRFSKHDIIGEVRVPMNQVDLGTITEEWRDLTSAENDKEN^ EKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKITLMQ^ GGKRLKKKKTTIKKNTLNPYFNESFSFEVPFEQIQ^ KVALVVSVFDYDRMGKNDPIGKLVLGCNASGTELRHWSDMLASPRRPIAQWHTLQMAEEG - GAAAATCCCGGTTGATTGTGTATAGCGAATTGATTAATATCGTGCGTTTTTGCATATTAATTGCG GTTATATCTATGTCTTTATTTATGTTTTGTTTGGTGTTAAGTTATGGTAAATATCATGGTCGTTT TGTTATTATGGCAAAAAGCGTTGATGTCAAACCATTAGTAAAGTAGCATACTGATGTTAAGTTGC TTCGTCATTTTCAATTTTCATTGAGGTACGTGGAGTCTTTCGATCAATGAAGTAATCAACGAAAC CTATATTCTTTCGTCTATGACCGAGCTGCGTTCAAGGCAGTTACTTTTTGAGACGTAAGGGCATT TGCAATATCGATCATCAATATTGCAGGCGCTTTTTCTCTGCGAGCAACGGACCTTCTGGGGCACT TTAGTACGAACGATGCTGTGTTGTTGCTGGTAGCTTCGGGCTATATTTACTTGGCTGTCAGTTAC AACAGTGAATAGAGGAGAGTTGATATAATTGTATGGTTAGCCACGTAACAGTCGACGCATTAAAC AAAACCTGTCACAAACAGACTTCGGTAGCACCGAATTAAATAATATTAGTTGTATAGGCTTTACA GTATCTTAAGTATCGGAAACTTTTAAGATAGCAGATAACCGGAC[GTGAGTCATTCGATAAATGA TGTGTTAACAAAAGAAAGTTGATGTTATTTATCGCAGTATAGAAATACAGACGTACAAACGTTCG ATACATTCGACCGTTTTCCTTTATGTTATTATATTGTGATACTATTGTATTGAATAGTGCGTCAC CATACGTGAATGCGACTTAAAATCGTCAAAATGCCGCGTGTTCATAACGAGACGATTGTAGGGAG TATTACAGAGTAAAAGAAATTTTAGTTCAGCCTTCATTACCCTACGGTAAAATGTTGCAACGGCT TGGAAATCGATTTTTAAATATGGCCAGCTTGTGGCGTTTGAATCTCGTATGGATTAATTTCCTTC ATCAGGGATTTACATTTGAACCTTTTAATATATAG]GTTTGTTCAATATTCGACCAAGTTATACC GCTGTAGTTGCTGATCAACTAAAGTTAGCGTGGAAGCAAGGAGATGTCCTTGTTTCGGAAGTTGG *** TAAAGAGAGCGGAAGACTCCTCTACTGATCCAACAAGTGATGCAGCGGATGCTCCGACAACAACA CAACCTCCGGCACCAGGAGGAGATACTCCGGAGGATGTCTTGAAAGGAGCAATTGACAACATTTA CTCAAAAC phase +1 ciona JGI v1.0 genome assembly scaffold 15 32129-33369 but region 32758-33137 sometimes spliced out http://genome.jgi-psf.org/ciona4/ciona4.home.html - TTCCAAGTTGGGCATGGATTCTGATCGCAATTGGGGCAGGACTTATATTGTTATGTGTCCTATAC TGTTGCTGTAAACGATGCTGCTGCAAAAAGAAGAAGAAAAAGCAGGAAAAGAAAGGCCTAAAGAA CGCTATAGATCTCAAATCTGTAAAGAATATGGGTGACAGTTACAGAGAAAAA phase 0 ciona JGI v1.0 genome assembly scaffold 15 33527-33708 - GTCCAACCTGACGTTGACGAAGTTGATATCGGTGAAAAAGAAGACGAAGAAGAGAAGAAATTGGG AAAGTTGCAATTTTCACTTGATTATGATTTCCAACAAAACAAT phase 0 ciona JGI v1.0 genome assembly scaffold 15 34123-34230 - TTGGCTGTCGGGGTAATTCAAGCTGCGGATCTTCCTGGAATGGACATGGGAGGGACTTCGGATCC TTATGTCAAA phase 0 ciona JGI v1.0 genome assembly scaffold 15 34456-34530 - GTATTCATGCTTCCTGACAAGAAGAAAAAGCAAGAAACCAAAGTCCATCGAAAAACATTGAACCC GGTTTTCAACGAAACATTCAATTTCAAG phase 0 ciona JGI v1.0 genome assembly scaffold 15 34853-34945 - GTACCATACAATGAAATTGGTGGAAAAACTTTGGTTTTCGCCGTTTACGACTTTGATCGCTTCTC AAAACACGATATTATCGGTGAAGTGAGAGTCCCTATGAACCAAGTCGATCTTGGTACGATCACTG AAGAATGGAGAGACTTAACCAGTGCCGAAAACGACAAAGAAAAC phase 0 ciona JGI v1.0 genome assembly scaffold 15 35533-35706 - GAAAAACTTGGAGACATTTGCTTTTCACTGAGGTATGTCCCTACAGCTGGTAAACTCACAGTCGT TATCTTGGAGGCGAAAAACTTGAAAAAGATGGATGTTGGAGGATTATCGGATCCCTACGTGAAGA TCACACTGATGCAG phase 0 ciona JGI v1.0 genome assembly scaffold 15 36206-36349 - GGAGGAAAACGTTTAAAGAAGAAAAAGACGACGATTAAAAAGAACACACTTAACCCCTACTTTAA CGAGTCGTTTAGCTTTGAAGTCCCATTCGAACAAATACAG phase 0 ciona JGI v1.0 genome assembly scaffold 15 36888-36992 - AAAGTTGCCTTGGTGGTGAGCGTCTTCGACTACGATAGGATGGGAAAGAATGATCCGATTGGAAA GCTAGTGCTCGGATGTAATGCCTCCGGTACCGAACTGCGACATTGGTCAGACATGTTGGCTTCGC CACGACGACCCATAGCGCAATGGCATACTCTGCAAATGGCGGAAGAAGGCTAGAGTTTTCAACAG *** GAAGTTTTTTCTTGTAATAACTAAAGCGGTTAGAAACTCGCCGCTTACCTAAACATGTAGTAAAA ACGTAGATCAGCTGAGACAACAATTTCACAAGTTCCACATATATATATTCCTGCACTTCGACACT CAAACCTCCACGGCAAGATTGCTTTTTCCTATTTATTTATTCCGAGCTGTATAGTCAGTACAACG AATCCGAATTTCTGCAAGCTTGCTTAACGCTTCAAATGTCTTAAATTGTCGTTCGTGGTTATCAA TGTTATCGTTACCACGGGTACATGAATATTTCGTGCAATCAATGTCGTTAGATCGTAATCGAATG TTGTAGACTGTACTGCCCGCTAACCCTTTTCCGAATATATGTTATCCGTCCACTAACACAACACA TTGACGCAATCTATTACTTTAAAATGTCACCGCAAAGGCACTTGACATACGAAAAACAGCGGTAA ACAGACGCACATTCAAGAAATTGTATCCGTATGGTTAACCATTGTCGTAGCAGTGTTTCCTGTTA ATTTCAAGAAAAACACAATAACAACAACAACAGTATCTCAAAATGGCCATTTAGATTAGGTTATC GTGTAGTTACATTGGCTTATCAGAGAAAGCACTCGGTCCAGCAAACCCGTTGGCCGGATAAGAAA CGGTGCATGTAAAATCAATATATCGAGCGCTGATCGATATTAAAGAAATTAGATTTGCATTGCCC TTTACTCTGCAGCTTTAATATTCGCTTTGTAAAATTACTGGTCTCCAAATAAAAGCTCTGCTCGA ATGCATAATTTTGTGTATACCACAAAACTAAATCTAACCGGATCCCAAACCGCATTTTACTGGTT CTGTATAGCCAACCGCTAAGTCATGCCATAGGCAAATACGTCATGATTAAATTTGGCGTGTCGTA TGTCATCAAGATGATGTATGACCATACCCATGTCGTCTATGTTATATAAGCCTAGTTTGTGCATC GTACGTCGCTGTAGATCGAATTTCATTGGCTTGATTCAGAATTCCCACCGGTGTAAGATTGCGTT TTCTCCTTGTTGCTTTTTATTTGATCAATATTCTGCTCTGTTCCTTGTATAGTTTCTTTATAATC TTCCCATGTCGTCACATGTCATTATTTATCTGCTTTATTATAAGACTACGAAACCCTTCAGTTTT CTTTGCTTTGCCACGATAGTAACTTCTGCGTAGTTATATCACAACTATGTGTCTACGAACTGTTC TGTACATAAGTGAACGTACATGTTTATCAACGGTGTGCAGCATTTGGTTGGGAATATCGTAAGGG TGCATAACTTTCTTCTTATTTTATGCAAGTCTTTTGGTCTGTTGGTTTTAGTGTTGTGACGGTTT GGGTTTGTGGGTGTTTTTAGTGGTCATGAATCATGATTTCAATTTGCACACAGCTCTGATTTTAC CACCCTAATTGGGGTGGGTGTAAAAACTGAGCTTTTAGTAACTGTACATAACTTGGTTGTCGTCA GGTAGTTGTGTACACCGTAATGTTTATGTATGAAGTACTTTGCCGTAGAAAAGCAAATATAGGTA AATCCAATCAGTACATTGCAGTAACTTTTGTATATTTATGAATATCAGCTTCTTTATGTTACTTT GTGGTTCGTTTACTCCTGATATAACTCGTCGTAACTGAATAACTAACCGTGCACTTTTATCTTCA TTTTCACCATTTATGTCGTAACACACGAGTCAACGTCACAATAATGTCGATATTCGACCACGAAA TAAAGCTCCCAAAGCTAACATG ciona JGI v1.0 genome assembly scaffold 15 37206-39177 -------------------------------------------------------------------------------- 21. Ciona syt7 Cisyt7 Size >6 Kb MGRIIMNHLFPHTQL^ RDDDLPETSVVASAAIIFCLSCLVISCLYCLKVRTGTR^ RKSEDHISARDLRMDTTKEDSSLLKKISSWFQPAEQDSVERKYSGTSSRYGST^ QYDKPPMGNMKINFVQPQGCDDVGASNAERPKLTSSSYVPEGFKLPFELSFD^ TGEEPQGKYLGKLEFSTVYQFNESTLLVKVLK^ AVDLPAMDLSGTSDPFVKCCLLPDRKRKLETKIRRKTLHPVWNETMSFE^ GLPYEKIKQRVLHLQVLDYDRFSRNDPIGETYVPLHTINLGEEMIQYVNLAPCKGS^ NKRGELLLSLCYQPLEGILDVEIIKGRNMKPMDLNGTS^ DPYVKIWLIYRGKRIEKKKTEIHKNNLNPEFHEEFTFNAPMDRLREMQLEITVMDHDTIGRNDTIGK^ IYLGHKSAGLEKQHWKDMLTNARKPSLQWHVLKI - TTTAGGCTCTTAATAACTAAATTTAGTTGTGATAAGGAAATAAGAAAGATATGAAATATGGGAAG *** AATTATCATGAACCACTTGTTTCCACATACCCAACTAA phase +1 ciona JGI v1.0 genome assembly scaffold 5 (645066-644964) - GGGACGATGATCTGCCGGAGACATCAGTGGTGGCTTCAGCAGCAATCATATTCTGTCTCTCCTGT CTTGTAATATCGTGCTTGTATTGTTTAAAAGTGAGAACTGGAACACGG phase 0 ciona JGI v1.0 genome assembly scaffold 5 (644262-644150) - CGAAAGAGTGAAGACCATATTTCGGCTAGAGATTTGAGAATGGACACAACGAAAGAAGACAGCTC TCTTTTGAAAAAGATTTCATCTTGGTTTCAGCCTGCAGAACAAGATTCAGTTGAAAGAAAATATT CGGGAACCTCTAGTCGTTATGGATCAACACA phase +2 ciona JGI v1.0 genome assembly scaffold 5 (643054-642894) - ATACGATAAACCACCGATGGGAAATATGAAGATTAACTTCGTACAACCACAGGGATGCGATGATG TTGGCGCTTCTAATGCAGAACGACCAAAACTAACTTCGTCGTCGTATGTTCCCGAAGGATTCAAA CTTCCATTTGAACTTTCGTTTGAT phase 0 ciona JGI v1.0 genome assembly scaffold 5 (642473-642320) - ACAGGAGAAGAACCTCAAGGAAAATATCTTGGAAAACTTGAATTCAGTACAGTGTACCAATTCAA CGAGTCTACTCTTCTTGTTAAAGTTTTAAAG phase 0 ciona JGI v1.0 genome assembly scaffold 5 (642037-641942) - GCAGTCGATTTACCGGCCATGGATTTGTCTGGAACCAGCGACCCGTTTGTGAAATGTTGTTTGCT TCCTGATCGAAAGCGAAAACTAGAAACTAAAATTCGGCGGAAAACATTACATCCAGTTTGGAATG AAACTATGTCATTCGAAG phase +1 ciona JGI v1.0 genome assembly scaffold 5 (641888-641741) - GTCTTCCCTATGAAAAAATAAAACAGAGAGTGTTACATTTACAAGTGTTAGACTATGATCGCTTC AGTAGAAACGACCCAATTGGAGAAACGTATGTTCCCTTGCATACAATCAATCTTGGAGAAGAAAT GATTCAATATGTCAACCTTGCGCCTTGCAAGGGTTCG phase 0 ciona JGI v1.0 genome assembly scaffold 5 (640787-640621) - AACAAGCGCGGTGAACTTCTGTTATCACTTTGTTACCAACCGTTAGAAGGTATTCTTGATGTGGA AATTATAAAAGGAAGAAACATGAAACCTATGGACCTTAATGGAACTTCTG phase +1 ciona JGI v1.0 genome assembly scaffold 5 (640563-640449) - ACCCTTACGTTAAAATTTGGCTTATTTACCGTGGTAAGAGAATCGAGAAAAAGAAAACGGAAATC CACAAAAATAACTTAAACCCGGAGTTTCACGAAGAGTTCACGTTCAACGCACCAATGGATCGGTT AAGGGAAATGCAGCTGGAAATAACGGTGATGGATCATGACACCATTGGCCGAAATGACACCATCG GGAAG phase 0 ciona JGI v1.0 genome assembly scaffold 5 (640397-640198) - ATATATCTTGGCCATAAGAGTGCTGGATTGGAAAAGCAACATTGGAAAGATATGTTAACAAATGC TCGAAAACCTAGTTTGCAGTGGCATGTGCTTAAAATCTAATTCCGTTCGAATAAGGATAACAAGA *** TTTCTATGTGGGTTTATACAGTAAATAATTTCAAGCATTGCTACTATTTCTTTACGGCGTCGACC AACTTGTATAAGCACGACATAAAAGCGAGCTATACAGGGGATGGCGACATTTCATACAACTTGCC CACATAAGCAACCAAGTGTTTTGTGAATAGTTGCAGTAAATACTACAATATTGGCGACCCAAAAA ATCCAGCAATTAGGTTGACACGGGATTTTTGCTTTTAAGAAGCACTGCTAAAGAGAACGCAGACA TATATAGTAGGGTGGGAGAAGATGGGACACATTTAGCACATAATATCCAGATACCCTGATTGTCT TTTAAACAATTAACAATGGTCTATGGGGGTCGTTACATGATACGGTTTCATATTTTTTCGAATAA TTTTTTTTACTACTAAATGGGACGAGAAAATAGAATGAAAGGGTGCGCCATCTTCCCCTATACCT TGCAATATATAATTTTTGGTGTTGTAACTCTTTACGCTAACAAATGTGTCGGAACAGTGTTAACA CAATATAGCGCATACCCCCTTTATTTTCACTGTGAGTTAACCAAAAACTCCAGACATGCAGTATA CCTTGTTTAAATAGTTACGGCTTTATTTTGACAGCATTGTTTTATCGTTAAACCCATATGTTTGC CAACAAATTACTTTTATTTGTTTAACTTTTTGCACTTTTCTAAACCTCTACTATATTATTGTTAC ACCATGCAGTTACTATAATGTTGATGATTCCTAAAGACAATTTCTTGATTGAATTTAGCATTTGT TGTCGCGCAACCAGTGATTTGTCATTGAGTAGAGAAATAATTAAATGGTTGTTGTTAGTTATGTT AAAATAAAGGCATTAAAAGCAGTATAACACG ciona JGI v1.0 genome assembly scaffold 5 (639943-638938) -------------------------------------------------------------------------------- 22. Ciona syt15 Cisyt15 Size >2.6 Kb Nterm missing VQSDIINGSPITRYPRSPTLSRVSFYQSNDRLSVDSWSQKPSPK^ GSLSSSNGDYLSNSPTCDVPRSPIEQSKNSFLGRIQPELY^ KYTENQDIDLPISRCGRMWFSVVYDAAVETLTVKVVK^ VKQLPLRHPSNNPPDSFVKIFLLPDERISQQTKVKLRNCNPTFNETFIFQ^ VSEEELQKRSLRMSVYDVDKKRSTRHLLGHALVGLNDVDPIKVNEILWRDLDDIAH^ PGDSGTSLGELKILLTYLPRMNRLNVVVQEARNLRKMDLDAT^ GIYVKVSLTQGHNVIKSKRTSTQDGAADPQYNESFSFKVTSKDMEQTCLLLN^ VITTGGRGTLHKMTSTLKNTVTRGRYGAELKYGRVSVGSFMYCRGEQLLHWQEMMAQPSK SIARWHTLSEVVTNQ - GTCCAATCCGATATTATTAATGGATCTCCCATCACCCGTTACCCTCGATCGCCAACGCTGTCACGTGT CAGTTTCTACCAATCGAATGATCGTTTATCTGTTGACAGTTGGAGCCAGAAGCCATCGCCAAAAG phase +1 aabs01000080.1 230040-230172 - GCAGTCTAAGTTCTTCAAATGGAGACTACCTTTCCAATTCCCCGACCTGTGACGTACCCCGATCTCCC ATCGAACAATCCAAGAACAGCTTTTTAGGTCGGATTCAACCCGAACTTTACAA phase +2 aabs01000080.1 230295-230415 - ATACACCGAGAATCAAGACATCGACCTCCCGATAAGCCGATGCGGTCGAATGTGGTTTTCCGTTGTTTA TGATGCCGCTGTAGAAACGCTGACTGTGAAAGTCGTGAAG phase 0 aabs01000080.1 230609-230717 - GTGAAACAACTACCTCTTCGACACCCAAGCAACAACCCACCTGACAGTTTTGTAAAGATATTTCTCCTA CCAGATGAACGAATTTCGCAACAAACTAAAGTAAAACTTAGAAATTGCAATCCAACTTTCAACGAGACA TTTATTTTCCAG phase 0 aabs01000080.1 231358-231507 - GTGTCCGAGGAAGAATTGCAAAAACGAAGTTTACGGATGTCGGTTTACGATGTCGACAAAAAGAGATCGA CTCGCCACTTACTCGGCCACGCTCTGGTTGGCTTAAACGACGTTGATCCAATAAAGGTTAATGAAATTCT TTGGAGAGACCTGGACGATATCGCCCAT phase 0 aabs01000080.1 231615-231782 - CCTGGCGACTCTGGCACCTCGCTCGGAGAGTTGAAAATCTTATTGACTTATCTGCCGAGAATGAATCGCCT CAACGTCGTCGTGCAAGAAGCTAGAAATCTTAGAAAAATGGATCTCGACGCCACAG phase +1 aabs01000080.1 232009-232135 - GTATCTACGTTAAAGTTTCTCTGACACAGGGACACAATGTAATCAAGTCCAAACGCACGTCAACTCAAGAC GGTGCAGCAGATCCACAGTACAACGAATCGTTCTCGTTCAAAGTCACTTCCAAAGACATGGAGCAGACATG CTTGCTCTTGAACG phase +1 aabs01000080.1 232215-232370 - TCATCACTACCGGTGGTCGCGGTACACTGCATAAGATGACGTCGACTTTAAAAAACACAGTCACGCGGGGA CGCTACGGAGCAGAGCTGAAATATGGCCGAGTTTCAGTTGGTTCCTTCATGTACTGTCGTGGCGAACAACT TCTTCACTGGCAAGAAATGATGGCACAACCTAGTAAATCTATCGCTAGGTGGCATACACTGTCCGAGGTTG TGACCAACCAGTAACCGATGAGCATAATCAATGATGACGTCATTGTTGTTGAAAGTTCATCGAGCCTGCCT *** GTGACCATTATACTTAGTTTTTGCCAGTTCGATATCGAATGTGCAATGATTTTTTAGCTCAATTTCCTTTA GTCAACTTCAAACCATTTTTCTACTGTATTTTGTACACGCTTTGTGACTGAAATAAAAAAG aabs01000080.1 232526-232941 -------------------------------------------------------------------------------- 23. Ciona syt16 Cisyt16 Size >8.6 Kb Transcript complexity affecting Nterm MVAIASTTHT^ VSTAAVIFLSVIVGITAFLVVFYMFFTKKACFKNCGGCDGLLEPGRYSGDEAL^ alt.Nterm MSTAMCCFHGLFAHMGSGGSSFSRDVVAVLKTDRAAKNRKQTVSVSSDDSLNDPDEIVEN WNDSSSKPRLSITADADEKKEAPRFARVSTRIKNSMRAIRSSLSDLRASTTSINTNNNN^ AKSFDDSDSDSSDDSEEETMRQMRKTVRRSSARKNNGSSS^ DIIDDQQPSTSNIDTTLNTNPSTPSSGEKQ^ MNEQQTVMDGTSPNEAPKQ^ MESPASHVSTNDGKEWNIDDSESVYSRELSSSLME^ EDEVAVAIAAKPSPLDGDSVDISMEDTTPISACGVIDIAVQYSISDRKLQITIIEAKELP SKDRGGASIIQ^ VRAVMLPAKRKRYKTKVQHINSSRFAETFKVSQVSPEELRRLGLRVRLYGIGK^ VRDRLIGEATVRFDELNLIRDPQLTVTLQLEPRTDVN^ RGDQLDVTGSQGYIDTSSVATLAHGGSLPELLLSLSYNEMTGRLCVEVVKGSHFRNLAMSKPP^ DTFVKLVLLNSSCQEMAQSKTTIRRSQPNPVFKEPFYFQ^ VALFQLVEVSLMVSVYSSKTIKKKEMLGWISLGQNSSSEADEQHWLEMKEAKGNTVSRWHTLIES - GCATAGTAGTAGCATTGGAATAAATCGAAATGGTGGCAATTGCAAGCACAACCCATACTG *** phase +1 aabs01000703.1 (23955-23896) - TTTCAACAGCAGCTGTGATATTCCTAAGCGTGATTGTTGGGATAACAGCATTCCTCGTCGTCTTTTAT ATGTTCTTCACAAAGAAGGCGTGTTTCAAAAACTGCGGCGGCTGCGATGGGTTGCTGGAACCAGGACG ATACTCGGGAGACGAGGCTTTAG phase +1 aabs01000703.1 (23192-23034) - alt. start ATGTCAACAGCGATGTGTTGTTTTCATGGTTTGTTCGCCCACATGGGGTCAGGAGGGTCGTCGTTCTC *** ACGCGATGTCGTTGCCGTTTTAAAAACTGACAGAGCAGCAAAGAATCGGAAACAAACCGTTTCTGTGA GTTCTGATGACAGTTTAAACGATCCGGATGAAATTGTTGAAAACTGGAACGATTCTTCATCTAAACCT CGCCTGTCAATCACCGCTGATGCGGATGAGAAGAAAGAAGCTCCGAGATTCGCTCGAGTCTCAACGAG GATCAAAAACTCGATGCGAGCTATTAGAAGCAGTTTGTCAGATTTAAGAGCTTCGACTACGAGTATCA ATACTAACAATAATAATA phase +1 aabs01000703.1 (20765-20408) - CGAAATCGTTTGATGATTCTGACAGCGATTCATCTGATGACAGCGAAGAGGAAACGATGAGACAGATG AGGAAAACCGTTCGCCGTTCGTCAGCGAGGAAAAATAATGGAAGTTCATCAG phase +1 aabs01000703.1 (20078-19959) - ATATTATAGATGATCAGCAGCCTTCAACTTCCAACATAGACACAACATTAAACACCAACCCTTCTACCC CATCAAGTGGTGAAAAACAAA phase +1 aabs01000703.1 (18952-18863) - TGAACGAACAACAAACAGTTATGGATGGGACTTCCCCCAATGAAGCACCAAAACAG phase 0 aabs01000703.1 (18697-18642) - ATGGAGAGCCCTGCATCCCATGTTTCAACCAATGATGGCAAGGAATGGAACATCGATGATTCGGAAA GTGTTTACAGTCGAGAACTCTCATCTTCTCTTATGGAG phase 0 aabs01000703.1 (18419-18315) - GAGGATGAAGTTGCCGTAGCGATCGCAGCTAAACCTTCACCACTAGATGGCGATAGTGTTGATATTTCA ATGGAAGACACAACTCCGATATCAGCGTGTGGAGTCATTGATATTGCCGTTCAATATTCAATATCGGAT CGCAAACTTCAAATCACGATCATCGAAGCCAAGGAGTTGCCATCCAAGGATAGAGGAGGGGCAAGCATT ATACAG phase 0 aabs01000703.1 (18093-17881) - GTTCGAGCTGTTATGTTACCAGCGAAGAGGAAACGATACAAGACAAAGGTCCAGCACATCAACTCTTCAA GGTTCGCTGAAACTTTTAAAGTTTCACAAGTTTCCCCCGAAGAACTTAGAAGACTTGGGTTGAGGGTTCG TTTGTATGGGATAGGGAAG phase 0 aabs01000703.1 (17516-17358) - GTACGGGATCGTTTGATTGGTGAAGCTACCGTGAGATTCGACGAATTAAATCTCATCAGAGACCCTCAGT TGACGGTGACTTTACAACTTGAACCAAGGACAGATGTTAAT phase 0 aabs01000703.1 (17063-16953) - CGAGGAGATCAACTTGATGTGACAGGATCGCAAGGTTACATCGACACATCATCAGTTGCAACACTCGCAC ATGGAGGTAGTCTACCAGAGTTATTGTTGTCTTTGTCGTATAATGAGATGACTGGCAGGTTGTGTGTTGA GGTCGTGAAAGGTTCACACTTCAGGAACTTGGCAATGAGCAAGCCACCTG phase +1 aabs01000703.1 (16630-16441) - ATACATTTGTGAAGTTAGTTTTGTTGAATTCTTCGTGCCAAGAAATGGCTCAAAGCAAAACAACAATCCG TCGATCACAACCTAACCCTGTGTTTAAGGAACCTTTCTATTTTCAA phase 0 aabs01000703.1 (16055-15940) - GTTGCGCTGTTCCAACTTGTAGAAGTTTCACTCATGGTGAGTGTTTATTCATCGAAAACAATCAAGAAG AAAGAAATGTTAGGATGGATATCACTTGGTCAGAACAGCAGCAGTGAAGCAGATGAGCAACACTGGCTT GAAATGAAAGAAGCGAAGGGCAACACTGTTAGCAGATGGCATACTCTCATTGAATCTTAACCTTTTTAC *** CTTTTATTGCACAAATACTGAAGCCTTGTATCTTAAGATTATTTTATATAAACAGTTTTAATGTTTTAT TTATCTGGCAGGATGTGGCTGTTACATTACATGCAGCATGTTTGGAACTGCCACCTCAATAAAACTATT TCTTTTTCTTTTATTATTGTACAAATTGCACAAGATACCGATTGAACAGACGATCAAAAGTGGATTTTA CAAATAAAA aabs01000703.1 (15755-15333) -------------------------------------------------------------------------------- 24. Danio syt1 Drsyt1 Size >50 Kb MSRREARVGNPAPTAAPEVPGNSTEAAGPGPRETKDEMFSKVKNKFMNELHKIP^ LPSWAIVAIAFVAVVLVVSCCFCICKKWIFKKKNKKKGKDKGKNAINMKDVKDGIKTE^ ALKDEDDAETGLTDTEKEVEPKEEEKLGKLQYSMDYNFTENT^ LIVGIIQAAELPAMDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLNPVFNEQFTFK^ VPYTELGGKTLVMTVYDFDRFSKHDAIGDVKVPMNKVDFSHVTEEWRDLQSAEKEE^ QEKLGDICFSLRYVPTAGKLTVVVLEAKNLKKMDVGGLS^ DPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQ^ KVQVVITVLDYDKIGKNDAIGKVFVGLNSTGTELRHWSDMLANPRRPIAQWHVLKPEEEVDALLAAQKK - ATGAGTCGAAGGGAGGCTCGGGTGGGGAACCCTGCGCCCACCGCTGCGCCTGAGGTACCGGGCAACA *** GCACAGAGGCAGCAGGACCCGGACCCCGTGAGACCAAAGATGAGATGTTCTCCAAAGTCAAAAACAA GTTCATGAATGAACTGCACAAAATCCCAC phase +1 bx511298.4 (180449-180287) - TGCCATCATGGGCTATCGTTGCCATTGCATTCGTTGCTGTTGTACTAGTTGTCTCCTGCTGTTTCTG CATCTGCAAAAAGTGGATATTTAAGAAGAAGAACAAGAAAAAGGGCAAAGACAAGGGCAAGAATGCC ATCAACATGAAGGACGTGAAGGACGGTATTAAAACCGAG phase 0 bx511298.4 (158469-158297) - GCCTTGAAGGATGAGGATGATGCAGAAACAGGGCTGACGGATACAGAGAAAGAGGTGGAGCCTAAGGA AGAGGAGAAACTTGGCAAATTACAGTACTCCATGGATTACAATTTCACAGAGAATACG phase 0 bx511298.4 (153427-153302) - CTCATAGTGGGGATCATCCAAGCAGCAGAACTGCCCGCCATGGATATGGGTGGTACTTCTGACCCATAC GTGAAGGTCTACCTTCTTCCAGATAAGAAGAAGAAATTTGAGACCAAGGTCCACCGGAAGACGTTGAAT CCTGTTTTCAATGAGCAGTTCACCTTTAAG phase 0 bx511298.4 (149349-149182) - GTTCCCTACACTGAGCTCGGAGGGAAGACTTTGGTGATGACAGTATACGACTTTGACCGCTTCTCCAAAC ACGATGCCATCGGAGATGTGAAGGTGCCCATGAATAAAGTCGACTTTAGTCATGTGACTGAGGAGTGGAG GGACCTCCAGAGCGCTGAAAAAGAAGAG phase 0 bx511298.4 (148327-148160) - CAAGAGAAGCTGGGCGACATCTGTTTCTCTCTGCGGTATGTGCCAACTGCTGGCAAACTGACCGTGGTCGT TCTGGAGGCCAAGAACCTGAAGAAGATGGATGTCGGTGGCCTGTCAG phase +1 bx511298.4 (146781-146664) - ATCCTTACGTCAAGATTCATCTGATGCAGAACGGCAAACGGCTGAAAAAGAAGAAGACGACAATCAAAAAGA ACACCCTCAACCCTTACTACAACGAGTCATTCAGTTTCGAAGTGCCATTCGAACAAATCCAG phase 0 bx511298.4 (134258-134125) - AAAGTTCAAGTTGTTATAACTGTTCTGGACTATGACAAGATTGGCAAGAACGATGCCATCGGCAAGGTGTTT GTGGGCTTGAACAGCACAGGCACCGAGCTCCGTCACTGGTCAGACATGCTGGCCAACCCGAGGAGACCCATC GCGCAGTGGCACGTGCTGAAACCCGAGGAGGAAGTGGATGCCCTGCTGGCAGCTCAGAAAAAATAGAGCAGT *** CCTCGGCCAAACC bx511298.4 (132684-132456) -------------------------------------------------------------------------------- 25. Fugu syt1 Frsyt1 Size >17.5 Kb No transcripts Derived from similarity to 24. MSESRREALAAAAPESATASSAVPGSNTTNIAGPGTGEKDEAFSKLKDKFMNQLDKIP^ LPSWAIVSIAFVAIILVLACCFCICKKWIFKKKNKKKGKDKGKNAINMKDVIDGGKPE^ ALKDEEDAETGLTETEKEAEPKEDQKLGKLQYSLDYNFTENT^ LIVGIIQAAELPAMDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLNPVFNEQFTFK^ VPYVELGGKTLVMTVYDFDRFSKHDAIGDIKVPMNKVDFSHITEEWRDLQSAEKEE^ QEKLGDICFSLRYVPTAGKLTVVVLEAKNLKKMDVGGLS^ DPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQ^ KVQVVITVLDYDKIGKNDAIGKVFVGLNSSGTELRHWSDMLANPRRPIAQWHVLKPEEEVEAQLSVKK - ATGAGTGAGAGCCGAAGGGAAGCACTGGCGGCGGCGGCGCCTGAGTCCGC *** CACCGCCTCCTCAGCCGTGCCAGGCTCCAACACCACCAACATCGCTGGCC CGGGCACCGGCGAGAAGGACGAGGCCTTTTCCAAACTGAAGGACAAGTTC ATGAATCAGCTGGACAAAATCCCCT phase +1 caab01001317.1 54782-54956 - TGCCGTCATGGGCCATCGTGTCTATTGCATTTGTGGCTATCATCCTGGTGT TGGCGTGCTGCTTCTGCATCTGCAAAAAATGGATATTCAAGAAGAAAAACA AGAAGAAGGGCAAAGACAAGGGCAAAAACGCCATCAATATGAAGGATGTCA TTGATGGAGGCAAACCTGAG phase 0 caab01001317.1 60032-60204 - GCCTTGAAGGATGAGGAGGATGCGGAGACAGGGCTGACTGAAACCGAGAAAG AGGCCGAGCCCAAGGAGGACCAGAAACTGGGCAAGCTGCAGTACTCCCTGGA TTACAATTTCACAGAGAATACG phase 0 caab01001317.1 62689-62814 - CTCATCGTGGGGATCATCCAGGCTGCAGAGCTGCCCGCCATGGACATGGGCGG CACGTCTGATCCCTACGTGAAGGTCTACCTGCTGCCTGACAAGAAGAAGAAGT TTGAAACCAAGGTCCACAGGAAGACCCTCAATCCCGTTTTTAACGAGCAGTTC ACCTTCAAG phase 0 caab01001317.1 64860-65027 - GTCCCCTACGTGGAGCTCGGTGGAAAGACGCTGGTGATGACCGTGTATGATTTC GACCGCTTCTCCAAACACGACGCCATCGGCGACATCAAGGTGCCCATGAACAAG GTGGACTTCAGCCACATAACGGAGGAGTGGCGGGACCTGCAGAGCGCCGAGAAG GAGGAG phase 0 caab01001317.1 65708-65875 - CAAGAGAAGCTGGGCGATATCTGCTTCTCCCTGCGATACGTCCCCACCGCCGGCA AGCTGACCGTGGTCGTCCTGGAGGCCAAAAACCTAAAGAAAATGGACGTGGGCGG CTTGTCAG phase +1 caab01001753.1 378-495 - ATCCGTACGTGAAGATCCACCTGATGCAGAATGGAAAGAGGCTGAAGAAGAAGAAG ACGACAATCAAGAAGAACACCCTCAACCCTTATTACAACGAGTCCTTCAGCTTCGA GGTCCCGTTTGAGCAGATCCAG phase 0 caab01001753.1 3971-4104 - AAAGTGCAAGTTGTTATAACTGTTCTGGACTATGACAAGATCGGGAAGAACGATGC CATCGGCAAGGTCTTTGTAGGCCTGAACAGCTCGGGGACGGAGCTGCGCCACTGGT CCGACATGCTGGCCAACCCCAGGAGACCCATCGCCCAGTGGCACGTGCTGAAGCCC GAGGAGGAGGTGGAGGCTCAGCTCTCCGTTAAGAAATAG *** caab01001753.1 4852-5058 -------------------------------------------------------------------------------- 26. Danio syt5.1 Drsyt5.1 Size >8.6 Kb Transcript complexity affecting Nterm MRLASMQHRGRRAAESEEEPNRAPPPLPPPSHHSHNFVNMKNKFFNELGHLP^ [NHKIR^] MPMWAIGAIIVVVLALVGCFAFCIYKKCLGGKKKTKKVRERKGGRRRMKKEGEEEAGE^ EQPKEGEGEGEKEYYGKLEYTLDYNFTENQ^ LIVGILQAQDLPAMDIGGTSDPYVKVYMLPDKKKKFETKVQRKNLCPVFNETFIFK^ IPFNDLAGQTLVLQVFDFDRFGKHDVIGEIKIPMNSIDLGQPIHEYKDLVGGEKEE^ QEKLGDICISLRYVPTSGKLTVCIMEAKNLKKMDVGGLS^ DPFVKIVLQHNGKRIKKKKTTVKQNTLNPYFNESFSFEIPFAQIQ^ KVQVLITVYDYDKLGSNDPIGKCWIGFGASGVGLRHWSDMLANPRRPVAQWHTLQPEEEVDAALKAPIR - GGACAGATGATAAAGTGGATGAGGAGTGTAAGTTAGAGCAGTGTGTGAGAGGGCTGATGCGCAAC TGTCCTTTCCAAGCAAAACACACATTTATATCAGTATAAGAGGGCTGGATCAGTGGCAGATCAG bx511021.3 26573-26701 - CTGATCAGCCATGCGATTGGCCAGTATGCAGCATCGTGGGCGGAGAGCAGCAGAATCAGAGGAGGA *** GCCTAATCGTGCTCCGCCTCCTCTTCCCCCTCCCTCTCACCACTCCCACAACTTTGTAAATATGAA GAACAAGTTCTTCAATGAGCTTGGACATCTACCTA phase +1 bx511021.3 29453-29619 - [ACCACAAGATCAGAA] phase +1 bx511021.3 31527-31541 - TGCCCATGTGGGCTATTGGTGCCATAATTGTGGTTGTGCTTGCCTTGGTGGGCTGTTTTGCTTTTTG CATCTATAAGAAGTGCTTGGGAGGTAAGAAGAAAACAAAAAAAGTCAGAGAGAGAAAGGGAGGACGA CGGAGGATGAAAAAGGAAGGAGAAGAAGAAGCAGGAGAG phase 0 bx511021.3 31618-31790 - GAGCAACCTAAAGAAGGAGAGGGCGAGGGAGAGAAAGAATATTATGGGAAGTTGGAGTACACTTTGGA CTATAACTTCACTGAAAATCAG phase 0 bx511021.3 31908-31997 - CTCATTGTTGGCATTTTACAAGCCCAAGATCTTCCTGCCATGGATATAGGTGGAACATCTGATCCCTAT GTGAAAGTTTATATGCTGCCAGACAAGAAGAAAAAGTTTGAAACGAAGGTCCAGCGGAAGAACCTGTGC CCTGTTTTCAATGAAACATTCATATTTAAG phase 0 bx511021.3 32140-32307 - ATCCCGTTTAATGATCTAGCAGGACAGACTCTGGTCCTGCAGGTGTTTGACTTTGACCGCTTTGGTAAAC ATGATGTAATTGGAGAGATCAAAATACCCATGAACAGTATTGATCTGGGCCAGCCTATACACGAATATAA AGACCTGGTTGGAGGGGAGAAAGAGGAA phase 0 bx511021.3 32415-32582 - CAAGAAAAGCTGGGAGACATCTGCATTTCCCTGCGCTATGTGCCTACCTCTGGAAAGCTGACCGTCTGTAT CATGGAAGCTAAGAATCTAAAGAAGATGGACGTGGGTGGTTTATCAG phase +1 atypical gc intron donor bx511021.3 32673-32790 - ATCCTTTTGTGAAAATAGTTTTGCAACACAATGGAAAGCGCATCAAGAAGAAGAAGACCACGGTCAAGCAGA ACACACTAAACCCATACTTCAATGAGAGCTTCAGCTTTGAGATACCTTTCGCTCAAATTCAG phase 0 bx511021.3 33464-33597 - AAGGTGCAAGTGCTGATTACTGTCTATGACTACGATAAACTGGGAAGTAATGATCCAATCGGGAAG TGCTGGATAGGGTTTGGTGCTAGTGGGGTTGGCCTGCGTCATTGGTCAGACATGCTTGCCAATCCC AGACGACCTGTGGCCCAGTGGCACACACTTCAGCCTGAAGAGGAAGTAGACGCTGCCCTAAAAGCA CCCATTCGCTAAATGTCACACTAATCCACCCTTACCGAATAAAGTTTTCAGCACACATCCGGCAAA *** GCATCATTTCAATCTTATTCATCCTGTCAGTGAGGAGTTTCTTTCTTTTATGCTATGCACATCATT ATATCCTGTACCCTTCTTTACTGTGAAATCACTTTTATAAATGTCACTATGTATAATTTGCTCGTG CTTCTTATTCAAATGTCTGTATGTGAATGATAACAGTGTGTTTGTGTTTGAAAGTGTTGTATGTGT GTATCTGTCCATGTGAAATCGTCCTGTTTGGCCTCTTTTGTTCTGTGACTCAAGATGACTATAAAT ACAGCACCTGGAATATAA bx511021.3 34687-35232 -------------------------------------------------------------------------------- 27. Fugu syt5.1 Frsyt5.1 Size >3.6 Kb No transcripts Derived from similarity to 26. MRLVSAAGARLRRAAEEEKEKEREPPPPQPPSHHSNHQFTSMKNKFFNELTHLP^ NHKLN^ LPMWAIGAIVVVVLALVCCMAFCIYKKCFNKGKKPKKVRERKGGRGRRKKDKDGEEGGEGEKK^ EGEEGKEEEEKEFFGKLEYTLDYNFTDNQ^ LIVGILQAQDLAAMDMGGTSDPYVKVYMLPDKKKKFETKVQRKNLCPVFNETFTFK^ IPYSDLGGQTLVLQVFDFDRFGKHDLIGEIKIPMNTIDLGQPIHEWKDLAGGEKEE^ QEKLGDICISLRYVPTAGKLTVNIMEAKNLKKMDVGGLS^ DPFVKVVLQHNGKRLKKKKTSVKQNTLNPYFNESFSFEIPFSQIQ^ KVQVLITVYDYDKLGSNDPIGKCWIGYGASGVGLRHWSDMLANPRRPVAQWHTLQPEEEVDAALKAPIR - ATGCGACTGGTCAGCGCAGCAGGGGCGCGGCTCCGCAGGGCGGCCGAGGA *** GGAGAAGGAGAAAGAGAGGGAGCCCCCGCCTCCGCAGCCCCCCTCGCACC ACTCCAACCATCAATTCACCAGCATGAAAAACAAGTTCTTCAATGAGCTC ACGCATCTGCCAA phase +1 caab01004759.1 (10399-10237) - ACCATAAACTCAACT phase +1 caab01004759.1 (9655-9641) - TGCCAATGTGGGCTATAGGAGCCATTGTGGTTGTGGTCCTGGCCCTTGTGT GCTGTATGGCATTTTGTATCTACAAGAAATGCTTCAACAAGGGCAAGAAGC CCAAGAAAGTACGCGAGAGGAAAGGAGGACGGGGCCGAAGGAAGAAGGACA AGGATGGAGAAGAAGGAGGGGAAGGAGAGAAGAAG phase 0 caab01004759.1 (8861-8674) - GAGGGAGAAGAAGGAAAGGAAGAAGAAGAAAAGGAGTTCTTTGGTAAACTGGA ATACACGCTGGACTATAACTTTACTGACAACCAG phase 0 caab01004759.1 (8341-8255) - CTGATAGTTGGGATCCTCCAGGCTCAGGACCTTGCAGCCATGGACATGGGGGGC ACCTCAGACCCCTATGTCAAAGTTTACATGTTACCTGACAAGAAGAAGAAGTTT GAAACCAAAGTCCAGCGCAAGAATCTCTGCCCTGTCTTCAACGAGACCTTCACA TTTAAG phase 0 caab01004759.1 (8017-7850) - ATCCCATATAGCGACCTAGGAGGTCAAACCCTGGTGTTGCAGGTGTTCGATTTTG ACCGTTTTGGCAAACATGACCTTATTGGGGAGATCAAAATCCCCATGAACACTAT CGATCTTGGACAACCGATACATGAATGGAAGGATCTTGCTGGAGGAGAGAAAGAA GAG phase 0 caab01004759.1 (7764-7597) - CAAGAGAAGTTGGGGGATATCTGTATTTCCCTTCGTTACGTCCCCACGGCTGGTA AACTCACAGTTAATATCATGGAAGCCAAGAATCTGAAGAAAATGGATGTAGGAGG ACTATCAG phase +1 caab01004759.1 (7481-7364) - ATCCTTTTGTCAAAGTGGTGCTGCAGCACAATGGAAAGAGGCTGAAGAAGAAGAAG ACTTCAGTCAAACAAAACACTTTGAATCCTTACTTCAATGAGAGTTTCAGTTTTGA GATTCCCTTCTCCCAGATCCAG phase 0 caab01004759.1 (7276-7143) - AAAGTTCAGGTGCTAATTACAGTGTATGACTACGACAAGTTGGGAAGCAATGACCCT ATCGGCAAGTGCTGGATTGGGTATGGTGCCAGCGGTGTTGGGCTACGCCACTGGTCG GACATGTTGGCCAATCCCAGGCGTCCAGTTGCCCAGTGGCACACGTTGCAGCCAGAG GAGGAGGTAGACGCTGCCCTGAAGGCTCCTATACGTTAA *** caab01004759.1 (6988-6779) -------------------------------------------------------------------------------- 28. Danio syt5.2 Drsyt5.2 Cterm missing 1 est only cd756880 MGFRVRRTAEPAEPEPEPEPEPHSKPEHRPHPAPPTHHDYDNMKSKFMNELEHLPL PMWAVGAIVVVVLALVACFTYCMFKKCFGKKKKSKKARERKRAARKKVEGTEGEGQGE QKDEGEKKEGEEQKEEHENLGKLEFSLDYNFTDAQ LIVGILQAQDLAAMDIGGTSDPYVKVYLLPDKKKKFETKVQRKNLCPVFNETFIFK IPYAELGGKL -------------------------------------------------------------------------------- 29. Danio syt2 Drsyt2 Size >6 Kb No transcripts Derived from similarity to other syts Nterm missing PSWATAALGFITVFIVLSCCLCIFRKMIFKKKKEKGGKEKNEKNDINMSNVKEEGTKQ^ AVHHTTDSDAKEEDSESKEAQKLGKLLYTLDYNFTDST^ LIVGVIRAEGLAAMDMSGTSDPYVKVYLLPDKKKKFETKVHRKTLEPTFNEHFTFK^ VPYAELGGKTLVMTVYDFDRFSKHDAIGDVRLQMNKVDFSHLTEEWRDLQKAEKEE^ QERLGDICLSLRYVPTAGKLTVVVLEAKNLKKMDVGGLS^ DPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPSEQIQ^ RHWSDMLANPRRPIAQWHALKPEEDVDAELIKK - TACCGTCCTGGGCTACAGCAGCGCTCGGCTTCATCACAGTCTTCATCGTCCTCAGCTGCTGTCTGTG CATCTTCAGGAAGATGATCTTTAAGAAGAAAAAGGAAAAAGGAGGGAAAGAGAAAAATGAAAAGAAC GACATCAACATGTCTAACGTGAAAGAGGAGGGAACAAAACAG phase 0 bx470218.10 33354-33529 - GCTGTTCATCACACCACTGATTCTGATGCCAAAGAAGAAGACTCAGAGTCAAAAGAGGCTCAGAAACT GGGAAAACTTCTTTATACCCTTGACTACAACTTCACTGACAGCACG phase 0 bx470218.10 35773-35886 - TTAATTGTAGGTGTGATTCGGGCTGAAGGGCTTGCTGCTATGGACATGAGTGGCACTTCAGATCCATAC GTTAAAGTTTACCTCCTCCCCGACAAGAAAAAAAAGTTTGAGACTAAAGTTCATCGCAAAACACTCGAG CCGACTTTTAATGAACACTTCACCTTTAAG phase 0 bx470218.10 36047-36214 - GTACCGTATGCAGAGCTCGGAGGGAAGACGCTGGTCATGACGGTGTACGATTTCGACCGTTTCTCCAAGC ACGATGCGATCGGGGATGTGAGGCTGCAGATGAATAAGGTGGACTTCAGCCATCTTACTGAGGAGTGGAG AGACCTGCAGAAAGCTGAGAAAGAGGAG phase 0 bx470218.10 36647-36814 - CAAGAGCGGTTAGGTGATATTTGCTTGTCTCTGCGCTACGTACCTACGGCTGGAAAGCTGACCGTGGTCGT TCTGGAGGCCAAAAACCTCAAAAAGATGGATGTGGGTGGACTCTCGG phase +1 bx470218.10 38814-38931 - ACCCGTATGTGAAAATCCACTTGATGCAGAACGGCAAAAGACTGAAGAAAAAGAAAACCACGATTAAGAAGAA CACACTGAACCCATATTACAACGAATCATTCAGCTTTGAAGTGCCATCTGAGCAGATTCAG phase 0 bx470218.10 39023-39156 - CGCCACTGGTCAGACATGCTGGCCAATCCAAGAAGACCCATCGCCCAATGGCACGCGCTTAAACCTGAAGAGG ATGTGGACGCCGAACTGATAAAGAAGTGA *** bx470218.10 39529-39630 -------------------------------------------------------------------------------- 30. Fugu syt5.2 Frsyt5.2 Size >2.2 Kb No transcripts Derived from similarity to other syts MRLPSAGVRGRRAAEPSKPEPEEDTEPVHHEHPHTELNEHSHSEHHPSHHDYNNMKEKFMNELDHLH^ IPMWAVGAIVVVVLVLVACLIFCAFKKCFGKKKKPKTVRERKVGRRRKEKEGEGESGEK^ DGEVKKEGTEEEKEQEKLGKLEYSLDYNFTEAQ^ LIVGILQAQDLAAMDMGGTSDPYVKVFLLPDKKKKYETKVQRKNLCPVFNETFIFK^ IPYAELGGKTLVLQVFDFDRFSKHDMIGEIKIPMNSVDLGQPMQQWRDLESGEKEE^ QEKLGDICISLRYVPTAGKLTVNIMEAKNLKKMDVGGLS^ DPYVKIVLQQNGKRIKKKKTTVKKNTLNPYFNESFSFEVPFAQIQ^ KVQVVITVFDYDKLGSNDPIGKTFMGYGATGVGLRHWSDMLANPRRPVAQWHTLLPEEEVDAALKAKPR - ATGAGGCTGCCCAGCGCTGGGGTCCGGGGCCGGAGGGCCGCAGAGCCGTCCAAACCTGAACCAGAGGA *** GGACACAGAGCCCGTGCATCATGAGCACCCCCACACGGAGCTCAACGAGCACTCCCATTCAGAACATC ACCCCAGCCACCACGACTACAACAACATGAAGGAGAAATTCATGAATGAACTCGATCATCTGCACA phase +1 caab01000606.1 99360-99561 - TCCCCATGTGGGCGGTCGGGGCCATCGTTGTGGTCGTTCTGGTTCTGGTGGCGTGCTTGATTTTCTGC GCTTTCAAAAAATGCTTTGGGAAGAAGAAGAAGCCCAAGACAGTGAGGGAGCGGAAGGTCGGCCGTCG CAGGAAGGAAAAGGAAGGCGAGGGAGAGAGCGGAGAGAAG phase 0 caab01000606.1 100072-100247 - GATGGGGAGGTGAAGAAGGAAGGCACTGAAGAGGAGAAAGAACAGGAGAAGCTGGGTAAACTGGAGTA CTCGCTGGACTATAACTTCACAGAAGCTCAG phase 0 caab01000606.1 100336-100434 - CTCATCGTGGGGATCCTCCAGGCTCAGGACCTGGCTGCTATGGACATGGGGGGGACCTCTGACCCCTAC GTCAAGGTCTTTCTGTTGCCAGACAAAAAGAAGAAGTATGAGACGAAAGTACAACGCAAGAATCTATGT CCCGTGTTCAACGAGACTTTCATCTTCAAG phase 0 caab01000606.1 100508-100675 - ATCCCGTATGCAGAGCTGGGTGGAAAGACGTTGGTGCTGCAGGTTTTTGACTTTGACCGTTTCTCCAAAC ACGACATGATCGGCGAGATAAAGATCCCCATGAACAGCGTGGACCTGGGCCAACCGATGCAGCAGTGGAG GGACCTGGAGAGCGGAGAGAAGGAAGAG phase 0 caab01000606.1 100752-100919 - CAGGAAAAACTGGGGGACATTTGCATTTCACTGCGATACGTACCCACTGCCGGAAAACTGACTGTGAACAT CATGGAGGCAAAGAACCTGAAGAAAATGGACGTTGGAGGCTTATCAG phase +1 caab01000606.1 101061-101178 - ATCCCTACGTGAAGATCGTTCTACAGCAAAATGGGAAACGGATTAAAAAGAAGAAGACGACCGTCAAGAAA AACACCCTCAATCCTTACTTTAATGAGAGTTTCAGCTTTGAGGTTCCCTTTGCGCAGATACAG phase 0 caab01000606.1 101252-101385 - AAAGTGCAGGTTGTCATCACGGTGTTCGACTACGACAAGCTGGGCAGCAACGACCCCATAGGAAAGACCTT CATGGGTTATGGAGCCACAGGAGTTGGGCTGCGCCACTGGTCGGATATGCTGGCTAACCCCAGGCGCCCGG TAGCCCAGTGGCACACCCTGCTGCCGGAGGAGGAGGTGGACGCGGCGCTCAAAGCAAAGCCTCGCTAG *** caab01000606.1 101473-101682 -------------------------------------------------------------------------------- 31. Fugu syt8 Frsyt8 Size >1.4 Kb No transcripts Derived from similarity to other syts Nterm missing ISKSTLLNSTAVMQVFDFNRFHKHNIIGELRLQLCNVDWNHVIEEWRDLAEPAKFE^ EENLGEICFSMRYVPSAGKLTVVILEARNLKSMDVGGSS^ DPYVKVQLALDKRKWKKKKTCIKKKTLNPYYNESFVFDVSFDQIQ^ RVNLVISVWDHDAVTRNDAIGKIFLGCDAAGNQLRHWADMLSNPRRPVAQWHSLLSSQQINSSLTLKKKIPLASKLPL - ATTTCTAAGTCCACTCTCCTGAATTCAACTGCAGTGATGCAGGTTTTTGACTTCAACAGATTCCATA AACACAACATCATCGGCGAACTCCGGCTGCAGCTCTGCAATGTTGACTGGAACCATGTGATTGAGGA GTGGCGGGACCTTGCTGAGCCTGCCAAATTTGAG phase 0 caab01009601.1 (3018-2851) - GAAGAGAACCTGGGTGAAATTTGCTTCTCAATGCGTTACGTTCCCTCTGCTGGCAAACTGACAGTGGT GATCCTAGAGGCCCGAAACCTGAAAAGCATGGATGTTGGAGGAAGCTCTG phase +1 caab01009601.1 (2702-2585) - ATCCTTATGTAAAAGTGCAGTTGGCTTTGGACAAGAGGAAGTGGAAGAAAAAGAAGACATGTATTAAA AAGAAGACTCTGAATCCTTATTACAATGAGTCCTTTGTCTTTGATGTGTCCTTTGATCAAATTCAG phase 0 caab01009601.1 (2049-1916) - AGAGTAAACCTGGTGATTTCCGTCTGGGACCATGATGCCGTGACACGGAATGATGCCATTGGGAAGAT CTTCTTGGGCTGTGATGCTGCTGGGAACCAGCTGAGGCACTGGGCTGACATGCTGTCCAATCCACGGC GGCCAGTTGCTCAGTGGCACAGCCTGCTGTCATCCCAGCAGATTAACTCCAGTCTAACCCTAAAAAAA AAGATACCGCTTGCCAGTAAACTGCCTTTGTAA *** caab01009601.1 (1847-1611) -------------------------------------------------------------------------------- 32. Danio syt4 Drsyt4 Partial amino acid sequence from ests aw174543 and bg306596 MAPVTTEEAHFAEVPVSVAVVSVXGLVFSVSIFAWICCQRKANKSSNKXPPYKFVHMLKGVDIYPESL SGKKKFGGEKTPEAHGKQTLSPTXGRPDLHLDLEXRDLXGNFTTXPPTLQLKVRSSPDIDIPALQGGF ANQEAGTPESVVSSHTPTPAVEKSQDKEGGLGTLFFSV -------------------------------------------------------------------------------- 33. Fugu syt4 Frsyt4 Size >4.3 Kb No transcripts Derived from similarity to other syts MAPMVEEGSQL^ VAVPTGVAVVSVFGLIFTASAFSWICCQRKSGKAQKTPPYKFVHMLKGVDIYPESLGGKKKFAAAAAMTT GDAGKTDINGNCHTTSLMSPASDGKLASSPSDARPALHLDLEKRDLNGNFTTKPFHHHQQQTVRSSPDLE LPSPHAGFTQPGTVDRRDLPSPSSSFSSQAPTPAVDKPLGEEKEGGVGTLHFSLEYQPERKAFIVHIK^ EAHGLAPTDEQSLTSDPYIKLTLLPEKKHRVKTRVLRKTLDPAFDETFSFYGIPLARVSELALHFMVLSF DRFSRDEVIGETLVPLSGIDLSEGRVLMSREIIKRNSK^ KSSGRGELLLSLCYQSTTNTLTVVVLKARNLPKIENNGPT^ DPYVKVNMYQGKKRVCKKKTHVKKCSPNPVFNELFVFDLPSEEGLRDTSVELLLMDSDSGNSRCPNTVLGRL VLGMSATGTPGEHWREICEHPRRQIAKWHGLSEE - ATGGCTCCAATGGTGGAGGAGGGGTCTCAGCTGG *** phase +1 caab01000435.1 (31783-31750) - TGGCAGTTCCCACCGGGGTTGCCGTGGTGAGCGTCTTCGGCCTCATCTTCACCGCCTCAGCGTTCTC CTGGATCTGTTGCCAGCGCAAAAGTGGCAAAGCCCAGAAGACGCCGCCCTACAAGTTCGTCCACATG CTCAAAGGGGTCGACATCTACCCGGAGAGCCTCGGCGGTAAGAAGAAGTTCGCCGCCGCCGCCGCCA TGACGACCGGTGATGCGGGGAAGACTGACATTAACGGAAACTGCCACACCACCTCGCTGATGAGCCC GGCTAGCGACGGCAAACTGGCGTCGAGCCCAAGTGACGCCCGGCCGGCCCTCCACCTGGATCTGGAA AAACGGGACCTGAATGGGAACTTCACCACCAAACCGTTTCACCACCACCAGCAGCAGACGGTGCGGA GCTCGCCGGACCTGGAGCTGCCCTCCCCTCACGCTGGGTTCACTCAGCCCGGCACCGTGGACCGCCG CGACCTCCCGTCACCTTCCAGCAGTTTCTCCAGCCAGGCGCCCACGCCAGCCGTGGATAAGCCTCTC GGGGAGGAGAAGGAGGGCGGAGTGGGGACCCTCCACTTCTCTCTGGAGTACCAGCCAGAGAGGAAGG CCTTTATTGTCCACATCAAA phase 0 caab01000435.1 (30346-29724) - GAAGCTCACGGCTTGGCTCCAACCGACGAGCAGTCCCTGACCTCTGACCCCTACATAAAGCTGACGC TGCTGCCAGAGAAGAAGCACCGCGTGAAGACCAGAGTACTGAGGAAGACCCTGGACCCGGCCTTTGA TGAGACCTTCAGCTTCTACGGGATCCCGCTGGCCCGCGTCTCCGAGCTGGCCCTCCACTTCATGGTG CTGAGTTTCGACCGGTTCTCCCGCGACGAGGTCATCGGAGAAACCCTGGTGCCGCTGTCCGGAATCG ACTTATCAGAGGGGCGTGTCCTGATGAGCCGGGAAATCATTAAGAGGAACTCAAAG phase 0 caab01000435.1 (29641-29318) - AAGTCTTCAGGGCGTGGCGAGCTGCTGCTCTCCCTCTGTTATCAGTCGACCACCAACACTCTGACCGT GGTGGTCCTCAAAGCTCGCAACCTGCCCAAGATTGAAAACAATGGACCCACAG phase +1 caab01000435.1 (28016-27896) - ATCCGTACGTCAAGGTCAACATGTACCAGGGGAAGAAGCGCGTCTGCAAAAAGAAGACCCACGTGAAGA AGTGCTCCCCCAACCCGGTCTTCAACGAGCTCTTTGTCTTCGATCTCCCCTCAGAAGAGGGTCTGAGGG ACACCAGTGTGGAGCTCCTGCTGATGGACTCCGACTCGGGCAACTCCCGCTGCCCCAACACTGTACTCG GACGCCTGGTGCTGGGCATGTCGGCAACAGGGACCCCTGGGGAGCACTGGAGGGAGATCTGCGAGCACC CGCGACGCCAGATTGCAAAGTGGCACGGCCTGTCTGAGGAGTAG *** caab01000435.1 (27760-27440, but remove 27475) -------------------------------------------------------------------------------- 34. Danio syt11.2 Drsyt11.2 Partial amino acid sequence from est al925135 QTGSADPYVKMTILPEKKHRVKTRVLRKTLEPAFDETFTFYGVPYSSLSDLTLHFLVLSFDRFSRDDV IGEAMVPLAGVDPSTGRVHITQQITKRNMQCVSHGELLVSLSYQPVSHRLSVVVLKAKHLPKLDITGL SANPYVKLNVFYGHKRIAKKKTHVKKCTLNPVFNESFIYDVPAD -------------------------------------------------------------------------------- 35. Danio syt11.1 Drsyt11.1 Size unknown (draft) MAEMTNLKPTY^ DVSPVLAGFLGAGVLVVSVTVAVFLWTCCQRRYRQMTGAYKLTSGPYDPPVDPPYKFIHM LKGISIYPETLSNSKKIVRVGRRSASNSLLREWGRGSRNGDVLLVDADPECGTTHLQMNH LVPPVGPPRLERALPIRADYCCMESSSGSSSEAHSKTASPYSLNSPSLGTLSLAIDYNFP KKALVVTIIGAQGLPAVDEQAGSSDPYVKMTILPEKKHRVKTRVLRKTLEPVFDETFTFY GVPYSSLPELTLHFLVLSFDRFARDDVIGEAVVPLEGVDPSTGRAHITQQISKRNTQ^ CESRGELLVSLSYHPVTHRLNVVVLKAKHLPTMDITGLSG^ NPYVKVNVFYGRKRIAKKKTHVKKCTLNPVFNESFIYDVPAELMPDISVEFLVIDFDRTTK NEVVGRLVLGGQSPIPSGVTHWREVCDNPRRQIAKWHNLIEY - CGCAGCCGCTGAAGAAAACATCCTACAGCTCGACCACCCGTTCAGCTGGAGGATCGGCCTAGAGAAA TTCATGGAAATTAAATAGAAATTCATTACCTTTGCTTTTTGTTTTTTGTTTTCTGATCACAGCCAAG CCATTGGACGCCAAAATGGCTGAGATGACCAATTTAAAACCAACCTATG *** phase +1 bx548249.4 (33088-32906) - ATGTGTCCCCAGTGCTTGCAGGTTTTCTGGGTGCAGGGGTCTTGGTTGTGTCCGTGACAGTGGCTGTT TTCCTGTGGACATGCTGTCAGAGGCGATATCGTCAAATGACAGGTGCGTACAAGCTGACCAGTGGCCC CTACGACCCCCCCGTCGACCCCCCCTACAAGTTCATCCACATGCTCAAAGGCATCAGCATCTACCCTG AAACCCTCAGCAACAGCAAGAAGATTGTGCGGGTGGGACGTCGCTCTGCATCGAACTCCTTGTTGAGA GAATGGGGTCGCGGATCTCGAAACGGTGACGTGCTGCTTGTGGATGCAGACCCTGAATGTGGTACCAC ACACCTACAAATGAACCACCTGGTCCCTCCTGTGGGTCCTCCTAGACTGGAGAGGGCGCTGCCTATCC GGGCCGACTACTGCTGTATGGAGAGCAGCTCAGGAAGCAGCAGCGAAGCTCACAGCAAAACGGCGTCT CCTTACAGTCTCAACTCCCCTTCTCTGGGGACGCTCAGTTTGGCTATTGACTACAACTTCCCCAAGAA AGCCCTGGTCGTGACTATCATAGGGGCGCAGGGGCTCCCAGCAGTGGATGAACAGGCAGGCAGCTCTG ACCCCTATGTGAAGATGACCATTCTGCCTGAGAAGAAGCACCGGGTGAAGACGCGTGTTCTGAGGAAG ACTCTGGAGCCTGTGTTTGACGAAACGTTCACTTTCTACGGTGTCCCATACAGCTCGCTGCCAGAGCT TACACTGCACTTCCTGGTGCTCAGCTTTGATCGGTTTGCACGGGATGATGTCATCGGGGAGGCAGTGG TGCCGTTAGAAGGCGTGGATCCCAGCACGGGGAGAGCGCACATCACCCAGCAAATTAGCAAGAGGAAC ACACAG phase 0 bx548249.4 (8616-7727) - TGTGAAAGCCGTGGGGAGTTGCTGGTCTCTCTGTCCTATCATCCTGTTACTCACAGGCTTAATGTGGT TGTCCTAAAGGCCAAACACCTTCCAACCATGGACATCACTGGCCTGTCAGGCA phase +1 bx548249.4 54629-54749 - ACCCGTATGTTAAAGTGAACGTCTTCTACGGCCGCAAACGCATAGCCAAGAAGAAGACACACGTGAAGA AATGCACACTCAATCCCGTATTCAATGAATCATTTATCTACGATGTTCCCGCTGAGCTAATGCCGGACA TCTCCGTGGAGTTTCTGGTCATCGATTTTGACCGCACAACAAAGAATGAGGTCGTGGGTCGGCTGGTTT TGGGTGGTCAGAGCCCCATTCCATCAGGGGTCACCCATTGGAGGGAAGTCTGTGACAACCCGCGGCGGC AGATCGCCAAGTGGCATAACCTTATAGAGTACTAGTGTCTGGCTAAAAAGCAAAGTGTATTATACCACT *** TCCTTCCTATCAGTCCCTCTATAGAAAGAAGCTCTCATTAAACAGTCTCTCCTTTTCCATATACAGATA GTGAGTGGACGAGTGAGTGTGTCAGTACAAAGGATCAGGAGCACTCTAATGGAAACACTTTTCAAGTTC TCTAAAGAACTATTAGCAAAAAAGCTTCATCATAGCAAAAAGAAAAAAGAAAAAATGGCCATGCTAATG TGGTCTTCGGCTCTGATTAGAAGTATACGACACAGTATCCTCAGAGCCTTTCACCAGTATATTCATAAT ATACACACACTACTTTCGATTAGCCGCATGTTAGCGATAATAAGACACTTTTACCATAAAAGAGAACTG CGAGCTTCAAGCCCACTTTTTCGAGAAAATTAAGCGTGAATG bx548249.4 56461-57192 -------------------------------------------------------------------------------- 36. Fugu syt11 (syt12) Frsyt11 Size >3.2 Kb No transcripts Derived from similarity to other syts Nterm and part of C2A missing IYPESLSSSKRIVRGARRAEHSDRGATTGRGMVLVDAENNILDVPGQLQMSHLIPPANSG PQGRLERALPVRTDYCCLDSSSGGSSQTNSKTPSPFTPASSEPEPEPERSLGTLSLTVDY NFPKKALVVTIVGARGLPRMDEQVSSSYPFVKMTILPEKKHRVKTRVLRKTLNPLFDETF TFYGVAYSSLPDLTLHFLGLSFDRFSRMMSLVSPWSRLEGVDPDTGRVSMGRP...^ CDSRGELLVSLSYQPVSHRLSVVVLKARHLPKMDMTGLSA^ NPYVKVNIFYGRKRIAKKKTHVKKCTLNPVFNESFIYDIPPELLPEISVEFLVVDFDRTTKNEV LGRLLLGLHSPAPTGASHWREVCESPRRQISKWHNLSEF - CATTTACCCAGAATCCCTCAGTAGCAGCAAGAGGATCGTCCGCGGCGCCAGACGAGCCGAGCACTCCG ACCGTGGTGCCACTACAGGAAGAGGCATGGTTCTGGTGGATGCTGAGAACAACATCCTGGATGTTCCA GGTCAGCTACAGATGAGCCACCTGATTCCTCCGGCTAACTCGGGGCCTCAGGGGCGGCTGGAGCGAGC GCTGCCAGTGCGCACTGACTATTGCTGCCTGGACAGCAGCTCTGGCGGCAGCAGCCAGACCAACAGCA AGACGCCGTCTCCATTCACACCTGCCTCCTCAGAGCCGGAGCCGGAGCCCGAGCGCAGCCTCGGCACG CTGAGCCTCACTGTTGACTACAACTTCCCAAAAAAGGCCCTGGTGGTGACTATTGTTGGCGCACGGGG CCTCCCCCGCATGGACGAGCAGGTCAGCAGCTCATACCCGTTCGTAAAGATGACCATTCTCCCAGAAA AGAAGCACCGCGTGAAGACCCGAGTTCTGAGGAAGACCCTCAACCCACTGTTTGACGAAACCTTCACT TTCTACGGCGTGGCCTACAGCTCGCTGCCTGACCTCACCCTGCACTTCCTGGGTCTCAGCTTTGACCG CTTTTCCCGTATGATGTCATTGGTGAGTCCGTGGTCCCGCCTGGAAGGCGTGGACCCTGACACGGGCC GAGTTTCAATGGGCCGGCCG caab01008425.1 1-703 but remove 419, 624, 625 - TGCGACAGTCGTGGGGAGCTACTGGTGTCTCTGTCCTACCAGCCCGTGTCCCATCGGCTCAGTGTGGT CGTCCTGAAGGCTCGACACCTCCCAAAGATGGACATGACTGGCCTGTCAGCGA phase +1 caab01008425.1 1717-1837 - ACCCCTACGTAAAGGTGAACATCTTCTACGGACGCAAGCGCATTGCCAAGAAGAAGACACACGTGAAAAA GTGCACGCTAAACCCGGTCTTCAACGAGTCCTTCATCTATGACATCCCTCCGGAGCTCTTACCTGAGATC TCTGTGGAGTTCCTGGTGGTCGACTTTGACCGCACCACCAAGAATGAGGTGCTGGGTCGTCTTCTGCTGG GCCTTCACAGCCCCGCCCCCACTGGCGCCTCACACTGGAGGGAAGTGTGCGAGAGCCCCCGTCGGCAGAT CTCAAAGTGGCACAACCTGAGCGAGTTCTGA *** caab01008425.1 2890-3200 -------------------------------------------------------------------------------- 37. Danio syt9.2 Drsyt9.2 Partial amino acid sequence from 6 ests MPVDREDEICQKALELLSDLCSKGEVQNENCLDFIYYFRDLARPRYSDS DISISLLSLVVTACGLALFGVSLFVSWKLCWIPWRERGLSPGTKEGHPDPPHPPPPPLQP QPIYTEVDATLDRRSNARSSVVKETTVPPTPVSPAVPGSPPAVPVPEAALKISHTSPDIP LEVESKTQENGVHGNTRMQRQITDPSSTCVRQSSIRRQMNQSNPDFTVTQFQRQDSLTGM SLGQLKPELYKQRSLDGEDSRSSRVGSCGR -------------------------------------------------------------------------------- 38. Fugu syt9.2 Frsyt9.2 Size >4.9 Kb No transcripts Derived from similarity to other syts Cterm missing MPGDRDDEICQKALELLSDLCSKGEVQNEHCLDFIYHFRDLARPRYSDS^ DVSVSLLSLVVTACGLALFGVSLFVSWKLCWIPWRERGLSPTTKEAQGHLNPTMSPLSSQLAAEQ PVYTAVDPPAHDPRDLSQCSMAREPTPMASVVSVEAPVTPMSPPPVVLAAPEAAMKISHTSPDIP LDAQSKAQENGVHTTPRMQRQTTEPP^ PQGSIRRHMNLSNPDFNVAQFQRQDSLTGMGLGLGRLKPELYKQRSLEGEEGGRRGGGCGWLHFIL KFDCDLEQLIVKIHKAEDLPAKDFSGTSDPYVKIYLLPDRMTKHQTKVHRKTLNPVFDEVFLFPVA YSELPTRKLHFSVYDFDRFSRHDIIGQVVVDNFLDLADFPRETKLCRDIQYIST - ATGCCTGGAGACAGAGATGACGAGATTTGTCAAAAGGCGCTTGAACTCCTGTCCGATCTTTGCTCGAA *** GGGGGAAGTGCAGAACGAACACTGCCTGGATTTTATCTACCATTTCCGAGACCTCGCCAGGCCACGAT ACTCGGATTCAG phase +1 caab01000392.1 47939-48086 - ATGTTTCCGTCAGTCTGCTGTCGCTGGTTGTGACCGCCTGCGGCTTGGCTCTGTTCGGGGTCTCGCTCT TCGTCTCCTGGAAGCTCTGCTGGATACCATGGAGGGAGCGAGGGCTTTCTCCCACCACCAAGGAGGCAC AGGGGCATCTCAACCCCACGATGAGCCCCCTGTCCTCACAACTCGCCGCCGAGCAGCCAGTATACACGG CCGTGGACCCCCCTGCACACGACCCCCGTGACTTGTCGCAGTGCTCCATGGCCAGAGAGCCCACTCCGA TGGCGTCTGTGGTCTCGGTGGAAGCTCCAGTCACGCCAATGTCCCCACCACCTGTGGTCCTGGCCGCAC CAGAGGCAGCCATGAAGATCAGTCACACGTCTCCAGACATTCCGCTGGATGCCCAGAGCAAAGCCCAAG AGAACGGAGTTCACACCACCCCTCGTATGCAGAGGCAGACCACCGAGCCCCCGCC phase +2 caab01000392.1 51684-52152 - GCAGGGGTCCATTCGCAGACACATGAACCTGTCCAACCCTGACTTCAACGTGGCTCAGTTCCAAAGACA GGACTCCCTCACCGGAATGGGCCTGGGCCTGGGCCGTCTCAAACCTGAGCTCTACAAACAGCGCTCCCT GGAGGGAGAAGAGGGTGGCCGCAGGGGTGGGGGCTGTGGATGGCTCCACTTTATCCTCAAGTTTGACTG TGACCTGGAACAGTTAATCGTTAAGATCCACAAGGCAGAGGACCTCCCAGCCAAGGACTTTTCCGGTAC CTCTGACCCATACGTGAAGATCTACCTGCTGCCTGACCGCATGACGAAGCACCAGACGAAGGTGCACCG CAAGACGCTGAACCCCGTGTTTGACGAGGTCTTCCTGTTCCCCGTGGCGTACTCTGAGCTACCTACACG AAAGCTGCACTTCAGCGTCTACGACTTCGACCGCTTTTCACGCCACGACATCATCGGCCAAGTGGTCGT GGACAACTTCCTGGATCTGGCAGATTTCCCGAGGGAGACAAAACTGTGTCGGGACATCCAGTACATCTC CACG phase 0 caab01000392.1 52273-52828 -------------------------------------------------------------------------------- 39. Danio syt9.1 Drsyt9.1 Size unknown (draft) MPADREDEICGKALELLSDLCSRGEVHNENCLDFTYYFRDLGRPRYSDS^ DVSVSLLSLLVTTCGLALFAVSLFVSWKLFWVPWRDRFLPSLKDQQGEQQPVLAEVEGLE REYSEDFEKDPNAPLVLPESAMKISHTSPDIQLEAQTKAKELNHIHIARVQRQVTEPTSSV^ RHNSIRRQMNVSNPDFNMAQFQRQESITGPGLGRIKPELYKQRSVDTDDGRRADSCGRLHF IIKYDCDLEQLIVKIHRAQDLPAKDFTGTSDPYVKIYLLPDRKTKHQTKVHRKTLNPIFDE VFLFPVAYGELPTRKLHFSVYDFDRFSRHDVIGQVVVDNFLDLPDFPQETRLCRDILYVSA^ DNVDLGDLMFSLCYLPTAGRLTITIIKARNLKAMDITGAS^ DPYVKVSIMCDGRRLKKRKTSTKRNTLNPVYNEAIVFDVPPENIDQISLLIAVMDYD^ RVGHNEVIGICHVGNRAPSLGRDHWNEMLTYPRKPIARWHQLVE^ WVGQSTTSGSQGSCNSLRTPPSP - ACAGCCTCTCATTCATGAAGATGCGCTTCAGCCGCGACACCTGTGTTTTCGGCTGAATTCAACCAGTG TCACGAAGCGCTATGCACTTACCTCCTCCTGCCAAACACACATCTGGAAACTCGCAGGGTTGATGTTG GACACACTGTTGAGCTGAACTTTTTTTTCCTTATGGGATTGAGCCGGGCGAGTATGAAGAGCGCTGTC AGCATCTGGAAGTCTCCATAGGCGTTATAGGAGTCTTTATTCAGAAGGATGCTGGAGGGAAATGCCTG *** CAGACAGAGAGGATGAGATTTGTGGAAAGGCGTTGGAGCTTCTGTCCGACCTGTGCTCGAGGGGAGAG GTGCACAATGAAAACTGCCTGGATTTCACTTACTATTTTCGCGATCTCGGGAGACCCAGATATTCGGA CTCTG phase +1 bx294190.6 (142361-141949) - ATGTGTCCGTGAGCCTGTTATCCCTCTTGGTGACCACATGTGGCTTGGCGCTGTTTGCCGTCTCCCTG TTCGTATCATGGAAGCTGTTCTGGGTACCATGGCGAGATCGCTTTTTGCCCAGCCTAAAGGACCAGCA GGGGGAGCAGCAGCCAGTCCTGGCTGAGGTGGAGGGCCTGGAGCGGGAATACAGCGAAGACTTCGAGA AAGATCCCAACGCTCCATTGGTGCTCCCAGAGTCAGCCATGAAGATCAGTCACACGTCCCCGGACATC CAGCTGGAGGCCCAGACTAAGGCCAAGGAGCTCAACCACATCCACATAGCGCGCGTTCAGCGACAAGT CACCGAACCAACCTCATCTGTCAG phase +2 bx294190.6 (127245-126882) - GCACAACTCCATCCGGAGACAGATGAACGTCTCCAACCCGGATTTCAACATGGCCCAGTTCCAGAGAC AAGAGTCCATCACGGGTCCAGGCCTGGGCCGCATTAAACCCGAGCTCTACAAGCAGCGGTCGGTGGAC ACGGACGACGGTCGACGAGCGGACAGTTGCGGACGCCTGCACTTCATCATCAAATATGACTGTGACTT GGAGCAGCTCATTGTCAAAATCCACAGGGCCCAAGATTTACCTGCCAAGGACTTTACGGGAACTTCCG ATCCTTATGTGAAGATCTACTTGTTGCCAGACCGGAAGACCAAGCATCAAACCAAGGTGCACCGCAAG ACTCTGAACCCAATTTTTGATGAGGTTTTTCTGTTCCCCGTGGCATACGGCGAGCTTCCGACTCGCAA GCTCCATTTCAGCGTCTACGACTTCGACCGCTTCTCTAGACACGACGTCATCGGCCAAGTGGTGGTGG ACAACTTTTTGGATCTACCGGACTTTCCACAGGAAACCAGGCTCTGCAGGGATATCCTTTATGTTAGT GCG phase 0 bx294190.6 (123767-123221) - GATAATGTGGATCTGGGAGATCTTATGTTCTCTCTTTGTTACTTGCCAACTGCGGGTCGTCTGACGAT AACCATAATTAAAGCCAGAAATCTTAAAGCCATGGACATCACAGGAGCGTCTG phase +1 bx294190.6 (97266-97146) - ATCCTTATGTAAAGGTTTCTATAATGTGTGACGGGCGGAGACTGAAAAAGAGGAAAACATCGACGAAGA GGAACACTCTCAACCCAGTCTACAATGAAGCCATCGTTTTTGATGTTCCACCGGAGAACATTGACCAAA TCAGTCTCTTAATAGCGGTCATGGATTATGATCG phase +2 bx294190.6 (95628-95457) - CGTCGGTCACAATGAGGTCATTGGGATTTGCCATGTGGGAAACAGAGCACCGAGTTTGGGCCGCGATCAC TGGAACGAGATGCTAACATATCCACGCAAACCCATCGCCCGCTGGCACCAGCTAGTGGAG phase 0 bx294190.6 (90799-90670) - TGGGTTGGTCAAAGCACGACCAGCGGCAGCCAAGGCTCCTGTAATTCCCTCCGGACGCCTCCTTCACCATGA *** bx294190.6 (78519-78448) -------------------------------------------------------------------------------- 40. Fugu syt9.1 Frsyt9.1 Size >2 Kb No transcripts Derived from similarity to other syts Nterm and Cterm missing IFHICPIHLVMQLIPLQVDGDEREDSEDDCMKEASCPPLAVPIVESGLKISHTSPDISLE VQAKSEKNHLHTLARDRVQRQITEPTSSV^ RHNSIRRQMNLSNPDFNPAQFQRQESLSGLGQIKPELYKQHSVDAEEGCHPDSCGRLYFILK FDFDLEQLIIKILKAEDLPAKDFSGTSDPYVKIYLLPDRKTKHQTKVHRKTLNPIFDEVFLF PIAYAELPVRKLHFSIYDFDRFSRHDLIGQVVVDNFLDLADFPRETKLCRYIQYVTS - ATTTTCCACATTTGTCCCATACATCTTGTAATGCAACTGATTCCTTTGCAGGTCGATGGTGATGAGAG GGAGGACAGCGAGGATGACTGTATGAAGGAAGCATCATGTCCTCCCTTGGCTGTGCCTATTGTAGAGT CAGGCCTGAAGATAAGCCACACATCACCGGATATTTCCCTGGAGGTGCAAGCTAAGTCAGAGAAAAAC CATCTCCACACTCTCGCTAGAGACAGGGTCCAGAGACAGATTACTGAGCCAACCTCATCTGTAAG phase +2 caab01008415.1 121-389 - GCACAACTCCATTCGGCGTCAGATGAACTTGTCTAATCCAGATTTCAACCCTGCTCAGTTTCAGCGTCA GGAGTCTCTGTCTGGTTTGGGTCAAATTAAGCCAGAACTCTATAAACAGCACTCGGTGGATGCAGAAGA GGGCTGTCACCCTGACAGCTGTGGGCGACTATATTTTATTCTGAAGTTTGACTTTGACCTGGAGCAGCT CATCATAAAGATCCTCAAAGCTGAGGACCTACCCGCCAAGGACTTCTCAGGGACGTCTGATCCTTATGT CAAAATTTACCTGCTGCCTGATCGTAAAACCAAGCACCAGACCAAGGTGCATCGCAAGACACTCAACCC CATCTTTGATGAGGTGTTTCTCTTTCCTATAGCATATGCTGAGCTGCCAGTCCGTAAGCTGCACTTCAG CATCTATGACTTTGATAGATTCTCTCGTCATGACTTGATTGGACAAGTGGTGGTGGACAACTTCCTGGA TCTTGCTGACTTCCCTCGAGAGACAAAACTCTGCCGGTACATACAGTATGTCACATCG phase 0 caab01008415.1 1799-2339 -------------------------------------------------------------------------------- 41. Fugu syt10 Frsyt10 Size >4.8 Kb No transcripts Derived from similarity to other syts Cterm possibly missing MSFRTEDSIALCKRALQIVTELCLTGHVDREKCSDIFALES^ NISISLLAVVVGFCGLALLVVSLFVFWKLCWPIWRSKALSAHVENGLRVGFPEAPQSNSLLAADCKVGE VEKKHPLEVKVNGRNSVKLQEAAMKISQTSPDIPAEVQTALRGKLKPQAKIQRQTTEPTSSS^ RHNSFRRHLPRQMNVTSFDFSMDAMPLRQSSTASIGRIKPELYKQKSVDAEEAREPVESCGKLSFSLR YDYEEQALVVRILKALDLPAKDFTGTSDPYVKIYLLPERKKKFQTRVHRKNLNPTFDEAFCFAVAYDE LCNRKLHFSVYDFDRFTSHDMIGEVVVDNLFELSDLSREAVVWKDIHAATT^ ESVDLGEIMYSLCYLPTAGRMTLTVIKCRNLKAMDITGSS^ DPYVKVYMVCAGRRLKKRKTTTKKSTLNPTYNEAIIFDIPPENVEQVSLSIMVMDYD^ RVGHNEVIGVCRAGPDAEGLGRDHWNEMLAYPRKPITHWHALGE^ - ATGAGTTTTCGGACGGAGGACAGCATTGCCTTGTGCAAAAGGGCTCTCCAGATCGTTACGGAA *** CTTTGTCTCACGGGACACGTAGACCGGGAAAAATGTTCGGATATATTCGCCCTGGAGAGCA phase +1 caab01000259.1 (153478-153355) - ACATCTCTATAAGTCTCCTAGCTGTGGTCGTGGGTTTCTGTGGCCTCGCCCTTTTGGTAGTCTCTCT GTTTGTCTTTTGGAAGCTGTGTTGGCCCATTTGGAGGAGCAAAGCTCTTTCAGCTCATGTGGAAAAT GGCCTCCGTGTGGGTTTCCCCGAGGCGCCTCAGTCCAACTCTCTGCTGGCCGCGGACTGCAAAGTGG GGGAGGTGGAGAAGAAGCATCCGCTGGAAGTGAAGGTGAACGGCCGGAACTCCGTCAAGCTCCAGGA AGCGGCCATGAAGATCAGCCAGACGTCTCCAGACATTCCGGCTGAGGTGCAAACAGCCCTGAGGGGG AAGCTCAAACCGCAGGCTAAGATCCAGAGACAGACCACGGAGCCGACGTCCTCCTCCAG phase +2 caab01000259.1 (152816-152423) - GCACAACTCGTTCCGGCGCCACCTGCCTCGGCAGATGAACGTCACCAGCTTCGACTTCAGCATGGACG CCATGCCCCTCCGTCAGTCATCCACGGCCAGCATCGGGCGGATAAAGCCTGAACTCTATAAGCAGAAA TCTGTGGATGCGGAGGAGGCCAGGGAGCCCGTGGAGTCCTGCGGGAAGCTCAGCTTCTCCTTACGGTA CGACTACGAGGAGCAAGCGCTGGTGGTGAGGATCCTCAAGGCTCTGGACCTGCCCGCCAAAGACTTCA CAGGAACCTCCGACCCCTACGTCAAGATCTACCTGCTACCAGAGAGGAAGAAGAAGTTCCAGACGCGC GTGCACCGCAAGAACCTGAACCCCACCTTCGACGAGGCCTTCTGCTTCGCCGTGGCGTACGACGAGCT GTGCAACCGCAAGCTGCACTTCAGCGTCTACGACTTTGACCGCTTCACCAGCCACGACATGATCGGCG AGGTGGTGGTGGACAACCTCTTTGAACTCTCTGATCTGTCCAGGGAGGCCGTCGTGTGGAAGGACATT CACGCGGCCACCACG phase 0 caab01000259.1 (150663-150105) - GAAAGCGTGGACCTGGGAGAGATCATGTACTCGCTGTGCTACCTGCCCACCGCGGGGAGGATGACCCT GACGGTCATCAAATGCAGAAACCTCAAAGCCATGGACATCACAGGCTCCTCAG phase +1 caab01000259.1 (149406-149286) - ACCCGTATGTGAAGGTTTACATGGTGTGCGCTGGACGGAGGTTGAAGAAGCGAAAGACTACCACCAAGA AAAGCACTCTCAACCCGACGTACAACGAGGCCATCATCTTTGACATCCCCCCCGAGAACGTGGAACAAG TCAGCCTGTCCATCATGGTGATGGACTACGACCG phase +2 caab01000259.1 (149084-148913) - GGTCGGACACAATGAGGTCATCGGCGTGTGTCGCGCCGGGCCCGACGCTGAGGGTCTGGGACGGGACCAC TGGAACGAGATGCTAGCTTACCCACGGAAACCCATTACACACTGGCACGCGCTGGGAGAG phase 0 caab01000259.1 (148828-148699) -------------------------------------------------------------------------------- 42. Danio syt10 Drsyt10 Size >16.8 Kb No transcripts Derived from similarity to other syts MNVRTEDGISLCQRALQIVTELCLAGHVDREKCADIFPLESNIPGKGSS^ DISVSLLAVVVGFCGLALLVVSLFVFWKLCWPIWRSKAFTSNADSCPPGVLLEAPPAPPPVS RSVSPYAEAKAVGVAGRQPLQIQHEDEEDKKWKVPEVKVNGRSSVKILEAAMKISQTSPDIP AEVQQALRDRLSKQAKIQRQTTEPTSSS^ RHNSFRRHLPRQMNVTSVDFTMDTLPVRQSSAVSIGRIKPELYKQKSVDSEEGTKEPVETCGK LSFALSYDYEEQALVVRILKALDLPAKDFTGTSDPYVKIYLLPERKKKFQTRVHRKTLNPTFD EDFRFPVEYSELCNRKLHFSVYDFDRFTSHDMIGEVVVDNLFELSDLSREAVVWKDILAATT^ ESVDLGEIMYSLCYLPTAGRMTLTVIKCRNLKAMDITGYS^ DPYVKVALICDGRRLKKRKTTTKKNTLNPVYNEAIIFDIPPENVEQVSLSITVMDYD^ RVGHNEVIGVCRAGPDAEGLGRDHWNEMLAYPRKPITHWHALCE^ WPGRASSFESQGSCPSPKPPQTP - ATGAATGTCCGCACAGAGGACGGCATCAGCCTGTGCCAAAGGGCTCTCCAAATAGTGACAGAGCTGTG *** CCTCGCCGGGCACGTCGACCGGGAGAAATGCGCGGATATATTTCCACTGGAGAGCAACATACCAGGTA AAGGAAGTTCAG phase +1 bx323015.4 52862-53009 - ACATCTCTGTAAGTCTTCTAGCTGTGGTCGTAGGTTTCTGTGGGCTCGCCCTTTTGGTAGTCTCTCTCTT TGTCTTTTGGAAGCTGTGCTGGCCCATTTGGAGAAGCAAGGCGTTCACGTCCAATGCTGACAGCTGTCCG CCGGGGGTGCTGCTCGAGGCCCCCCCTGCACCACCTCCGGTGTCTCGTTCTGTTTCTCCTTATGCTGAGG CAAAAGCCGTTGGAGTTGCAGGACGACAGCCATTGCAAATCCAGCATGAGGATGAGGAGGACAAGAAGTG GAAGGTACCAGAGGTGAAAGTGAACGGCCGCAGTTCGGTTAAGATCCTAGAGGCGGCCATGAAGATCAGC CAGACGTCACCAGATATCCCTGCTGAGGTGCAGCAGGCACTGCGGGACCGTCTGAGCAAGCAGGCCAAAA TTCAGCGGCAGACCACTGAACCTACCTCGTCCTCCAG phase +2 bx323015.4 54419-54875 - GCACAATTCTTTCCGCCGACACCTGCCCCGGCAGATGAATGTGACCAGTGTGGACTTCACTATGGACACTC TACCTGTGCGCCAGTCTTCTGCAGTCAGCATCGGCCGTATCAAACCTGAACTGTACAAGCAGAAGTCTGTA GACTCTGAAGAGGGTACGAAGGAGCCGGTGGAGACGTGCGGAAAACTGAGCTTTGCTCTAAGCTATGACTA TGAGGAACAAGCTCTTGTGGTTCGCATTCTCAAGGCCCTGGACCTGCCCGCAAAAGACTTCACCGGTACCT CAGACCCTTATGTGAAGATATACCTGCTTCCAGAGCGCAAAAAGAAGTTTCAGACGAGAGTCCACCGTAAA ACCCTCAATCCCACATTCGACGAGGATTTCCGTTTCCCTGTGGAGTACAGCGAGCTGTGTAATCGCAAGCT GCACTTCAGCGTGTACGACTTTGACCGCTTCACGAGTCATGATATGATTGGTGAGGTGGTGGTTGATAACC TGTTTGAGCTGTCTGATCTATCACGCGAAGCCGTGGTTTGGAAGGACATCCTTGCAGCCACTACA phase 0 bx323015.4 60205-60766 - GAGAGCGTGGATCTGGGTGAAATAATGTACTCCCTTTGCTATCTTCCCACGGCTGGACGCATGACCCTCAC AGTCATCAAATGTCGCAATCTAAAAGCCATGGACATAACTGGCTATTCTG phase +1 bx323015.4 66779-66899 - ATCCATACGTTAAAGTAGCCCTCATATGTGATGGTCGGAGGCTGAAGAAGCGGAAGACGACCACCAAAAAG AACACACTCAACCCGGTCTATAACGAGGCCATCATTTTCGACATCCCACCTGAGAATGTGGAGCAGGTCAG CCTGTCAATCACGGTGATGGACTACGACAG phase +2 bx323015.4 68369-68540 - AGTTGGACACAATGAAGTGATAGGGGTGTGCAGGGCGGGGCCGGATGCCGAGGGTCTTGGAAGAGACCACT GGAACGAGATGTTAGCCTATCCACGCAAGCCCATCACCCACTGGCATGCACTATGTGAG phase 0 bx323015.4 68910-69039 - TGGCCAGGACGGGCATCCAGCTTTGAGAGTCAAGGATCATGTCCATCTCCAAAACCACCACAGACCCCTTAA *** bx323015.4 69627-69698 -------------------------------------------------------------------------------- 43. Fugu syt6 Frsyt6 Size >4.5 Kb No transcripts Derived from similarity to other syts Nterm missing ATFGLLLAVFVVCGLTLLGLLAFVSWKLRVTSRQPAKSGCSGSSLGPERHPLQPPLPLLPSPQRPSVTMAT EKVKDPVGSMGFLEAAVKISRTSPDIPTDVQLSMREHFLRRTQRMQRQTTEPASST^ RHSSFKRHLPRQMQVGSLDLGNDYVLEKDETSTSIGRIQPELYQQKDLESEDSSKNGSSKNCGSINFSLQY DYENEALLVNVLKAVDLPAKDLCGTSDPYVKVYLLPDRKKFQTRVHRKTLNPTFSETFQFPVPYDELAARK LHMSVFDFDRFSRHDMIGEVVLENLFETSDLSRETTMWRDIQYATS^ ESVDLGEIMFSLCYLPTAGRLTLTVIKCRNLKAMDITGYS^ DPYVKVSLMCDGRRLKKKKTSIKKNTLNPSYNEAIIFDIPPDSMDHVSLHISVMDYD^ LVGHNEIIGVMRVGCHAEGLGRDHWNEMLAYPRKPIAHWHPLLEPKRSEKE^ WKARTASFDSQGSCPSPRPPASP - ACGCCACTTTTGGCCTCCTGCTCGCCGTGTTTGTGGTCTGCGGCCTGACCCTGCTGGGCCTCCTCGCC TTCGTCTCCTGGAAGCTGCGCGTCACATCTCGGCAACCCGCCAAAAGCGGCTGCTCCGGCTCCTCCCT CGGCCCGGAGCGCCACCCGCTGCAGCCTCCGCTCCCCCTGCTGCCCAGCCCCCAGCGGCCGTCGGTCA CCATGGCGACGGAGAAGGTGAAGGACCCCGTGGGCTCGATGGGCTTCCTGGAAGCGGCTGTGAAGATA AGCCGCACGTCTCCCGACATCCCCACCGACGTGCAGCTGTCCATGAGGGAGCACTTCCTGCGCCGCAC GCAGCGCATGCAGAGGCAGACCACCGAGCCGGCCTCCTCCACCCG phase +2 caab01005342.1 4647-5031 - GCACAGTTCCTTCAAACGGCACCTGCCCAGGCAGATGCAGGTGGGCAGCCTGGACCTGGGGAACGACT ACGTCCTGGAGAAGGACGAGACGTCCACCAGCATCGGCCGCATCCAGCCGGAGCTCTACCAGCAGAAG GACCTGGAGTCAGAAGATTCTTCCAAGAACGGCAGCAGCAAAAACTGCGGCTCCATTAACTTCTCCCT CCAGTACGACTACGAGAACGAGGCGCTCCTCGTCAACGTCCTCAAGGCCGTCGACCTGCCCGCCAAGG ACCTGTGTGGCACCTCTGACCCCTACGTGAAGGTCTACCTGCTGCCGGACCGCAAGAAGTTCCAGACC CGAGTCCACCGCAAGACCCTCAACCCGACCTTCAGCGAGACCTTCCAGTTTCCTGTGCCTTACGACGA GCTGGCGGCCAGGAAGCTCCACATGAGCGTCTTTGACTTTGACAGGTTTTCCCGCCACGATATGATCG GGGAGGTGGTGCTGGAGAACCTGTTTGAGACTTCCGACCTTTCCAGGGAGACCACCATGTGGAGGGAC ATCCAGTACGCCACCAGC phase 0 caab01005342.1 5458-6019 - GAGAGCGTTGACCTCGGCGAGATCATGTTCTCTCTTTGTTACCTGCCCACCGCCGGGCGACTCACACT TACTGTCATCAAGTGCAGGAACCTGAAGGCCATGGACATCACTGGATACTCAG phase +1 caab01005342.1 8228-8348 - ATCCCTACGTCAAAGTGTCGCTCATGTGCGACGGCAGGCGTTTGAAGAAGAAGAAGACGAGCATCAAGAA GAACACCCTGAACCCGTCCTACAACGAGGCCATCATCTTCGACATCCCCCCCGACAGCATGGACCACGTC AGCCTGCACATCTCCGTCATGGACTACGACCT phase +2 caab01005342.1 8582-8753 - GGTCGGCCACAACGAGATCATCGGGGTGATGAGGGTGGGCTGCCACGCCGAGGGACTGGGCCGGGACCACT GGAACGAGATGCTGGCCTACCCACGCAAGCCCATCGCACACTGGCACCCCCTGCTGGAGCCCAAGAGGTCG GAGAAGGAG phase 0 caab01005342.1 8818-8968 - TGGAAGGCCAGGACAGCCAGTTTTGACTCCCAGGGCTCCTGTCCCTCGCCCAGGCCCCCCGCCAGTCCCTGA *** caab01005342.1 9083-9154 -------------------------------------------------------------------------------- 44. Danio syt6.1 Drsyt6.1 Size >19.8 Kb No transcripts Derived from similarity to other syts Nterm missing ISFSLLLLVFVVCGLALLGVISVATWKLCWVSWRSKVLSSSATALAPTQPEREQPREEGH GDYYPALRDIMAADKLKDPGNFLEAAVKISHTSPDIPADVQLSMKDHLLRRTRISRQTTE PASSN^ RHSSFKKHLPRQMHHVTSLDRGSEFLDVEDHPSCTAASLGRIQPELYKQSTMEAE DSSKNDTDKSCGKINFSLKYDYEGELLLVTILKAFDLPAKDLCGSSDPYVKIYLLPDRKR KFQTRVHRKTLNPTFDETFQFPVPYEELGSRKLHLSVFDFDRFSRHDMIGEVILENLFEV SDLSRETSIWKDIQYATS^ ESVDLGEIMFSLCYLPTAGRLTLTVIKCRNLKAMDITGYS^ DPYVKVSLICDGRRLKKKKTSIKKNTLNPTYNEAIIFDIPPENMDQVSLHISVMDYD^ LVGHNEIIGVCRVGIHAEGLGRDHWNEMLAYPRKPIAHWHPLVEPKKSEKE^ WKARTASFDSQGSCPSPRLPSSP - ACATTTCCTTCAGTCTCCTGCTGCTTGTATTTGTGGTGTGCGGTTTGGCCCTGCTGGGTGTCATCAG CGTCGCCACCTGGAAGCTGTGCTGGGTGTCCTGGCGCAGCAAAGTGCTTTCCTCTAGCGCCACCGCC CTTGCTCCCACCCAGCCAGAGAGAGAACAACCCAGAGAAGAAGGTCACGGTGACTACTACCCGGCCC TCAGAGACATTATGGCAGCAGACAAGCTGAAGGATCCTGGGAACTTTCTGGAGGCGGCAGTGAAGAT TAGTCATACGTCGCCAGATATCCCCGCAGACGTGCAGCTGTCCATGAAGGATCATCTTCTGAGACGG ACGCGTATCTCACGGCAAACAACCGAGCCGGCCTCCTCCAACAG phase +2 bx072564.4 159344-159722 - GCATAGTTCCTTTAAGAAGCACCTTCCCAGGCAGATGCACCATGTCACCAGTCTGGACCGCGGAAGT GAATTTTTAGACGTGGAGGACCATCCCAGTTGCACCGCTGCCTCTCTTGGACGCATCCAACCGGAAC TTTATAAACAGAGCACAATGGAAGCAGAGGATTCTTCTAAAAATGACACTGACAAATCATGCGGCAA GATCAACTTCTCCCTAAAGTACGATTATGAGGGAGAGCTCCTCCTCGTCACTATCCTCAAGGCATTC GATCTTCCTGCAAAGGATTTGTGCGGGAGTTCCGATCCATATGTCAAGATCTACCTGCTGCCTGACC GCAAGCGTAAATTTCAAACTCGTGTTCACCGCAAGACGCTCAACCCCACGTTTGATGAGACCTTTCA ATTTCCAGTACCATACGAGGAGCTGGGGTCCAGGAAACTCCACTTGAGCGTTTTTGACTTTGACCGC TTCTCACGGCACGACATGATTGGCGAGGTGATCCTGGAAAACCTCTTTGAAGTTTCAGACCTCTCGC GAGAGACGTCCATCTGGAAGGACATCCAGTACGCCACTAGC phase 0 bx072564.4 162077-162653 - GAGAGTGTGGATCTCGGAGAGATAATGTTCTCTCTGTGCTACTTGCCGACTGCAGGGAGACTCACAC TTACAGTCATCAAATGTAGGAACCTCAAAGCTATGGATATTACTGGTTATTCAG phase +1 bx072564.4 174557-174677 - ATCCGTACGTGAAGGTTTCGCTGATTTGTGATGGGAGACGCTTGAAAAAGAAGAAAACGTCCATAAAA AAGAACACGCTGAATCCAACATACAATGAGGCGATCATCTTTGACATTCCCCCGGAGAATATGGATCA AGTCAGCTTACACATATCGGTTATGGACTACGATCT phase +2 bx072564.4 174862-175033 - AGTGGGACATAATGAGATCATTGGAGTCTGTCGTGTAGGGATCCATGCCGAGGGGCTTGGAAGAGACCA CTGGAATGAGATGCTGGCTTACCCTCGAAAACCCATCGCTCACTGGCACCCACTTGTAGAGCCTAAGAA GTCTGAGAAGGAG phase 0 bx072564.4 178813-178963 - TGGAAGGCTCGCACCGCAAGCTTTGACAGTCAAGGCTCTTGTCCATCTCCCAGACTCCCTTCAAGTCCATAA *** bx072564.4 179046-179117 -------------------------------------------------------------------------------- 45. Danio syt6.2 Drsyt6.2 Partial amino acid sequence from 1 est al922092 NEMLLVKILKAFDLPAKDLCGSSDPYVKIYLLPDRKQKFQTRVHRKTLNPTFDESFQFPV PYDELAVRKLHLSVFDFDRFSRHDMIGEVILDNLFEVSDLSRETSVWRDIQYATSESVDL GEIMFSLCYLPTAGRLTLTVIKCRNLKAMDITGYSDPYVKVSLICDGRRLKKKKTTTKK -------------------------------------------------------------------------------- 46. Fugu syt12 Frsyt12 Size >4.3 Kb No transcripts Derived from similarity to other syts MSSPQSGDISGYHLS^ VVRNPPGWEVGIYLAGFFVLLAVAGLNIWKLWKSGTFPTPSPFPNFDYRYLQEKYGTSFSEVRQK^ RVAANNHRRTSATSSRKPSLALCDTPDAFRDLGHLELMSRELDPTGMAQLNRSISTDSLSSISSIANNFG HDFTVGQLEVTLEFEPSRHPNQGTGLLHMTLHQGKDLLEKEEGDFPGCFIRVSLGPEEINIGVTR^ VQTNAFTVIFDEHYTIPMDLSALEEYTLRFAAFGIDADERNISAGIADLKLSDLDLTVRPFNAWLYLQDVNK^ AVDAVGEILLSLSYLPTAERLTVVVAKCKNLVWTDSKTTA^ DPFVKVYLLQDGKKISKKKTSTKRDDTNPIFNEAMIFSVPSNVLQ^ ELSLRVTVAETTEDGRGENLGHVIIGPEASGMGITHWNQMLATLRKPVSMWHPLRRI - ATGTCCTCGCCTCAAAGTGGGGATATATCGGGCTACCATCTGAGCG *** phase +1 caab01001283.1 50378-50423 - TGGTGCGGAACCCACCTGGCTGGGAGGTCGGCATCTACCTGGCAGGTTTCTTTGTGCTGCTGGCCGTG GCGGGGCTCAACATCTGGAAGCTGTGGAAATCTGGAACGTTCCCCACGCCGTCCCCATTCCCCAACTT TGACTATCGCTACCTACAAGAAAAATATGGGACTTCCTTCTCAGAAGTCAGACAGAAG phase 0 caab01001283.1 50981-51174 - CGAGTCGCTGCCAACAACCATCGGCGAACCTCCGCCACGTCCAGCCGCAAGCCGAGCCTGGCCCTGTGC GACACTCCGGACGCTTTCAGGGACCTGGGTCACCTGGAGCTGATGAGCAGGGAGCTGGACCCCACCGGG ATGGCTCAGCTTAACCGCTCTATTTCCACCGACTCGCTCAGCTCAATCTCCTCCATCGCCAACAATTTC GGCCACGACTTCACGGTGGGCCAGCTGGAGGTCACCCTGGAGTTCGAGCCGTCCCGACACCCCAACCAG GGGACAGGACTGCTCCACATGACTCTGCACCAGGGCAAAGACCTGCTGGAAAAGGAGGAGGGAGACTTC CCCGGCTGCTTCATTAGAGTTTCCCTGGGGCCCGAAGAGATCAATATAGGAGTCACGAGG phase 0 caab01001283.1 51254-51658 - GTCCAGACGAACGCATTCACGGTGATTTTTGACGAGCACTACACCATCCCTATGGACCTGTCCGCTCTG GAGGAGTACACTTTGCGTTTTGCTGCTTTTGGCATTGATGCCGATGAGAGAAATATAAGCGCTGGGATA GCAGATCTCAAGCTGTCAGATCTGGATCTGACCGTCAGACCTTTCAATGCCTGGCTTTACCTTCAGGAC GTTAACAAA phase 0 caab01001283.1 53556-53771 - GCCGTGGATGCGGTTGGAGAAATCTTGTTGTCTCTCAGCTATCTGCCAACAGCCGAGCGTCTCACTGTG GTTGTGGCCAAGTGCAAGAACCTGGTGTGGACAGACAGCAAGACGACGGCAG phase +1 caab01001283.1 54036-54156 - ACCCCTTCGTCAAGGTGTATCTCCTACAAGACGGCAAGAAGATCAGCAAGAAGAAGACGTCCACCAAAAG GGATGACACCAACCCCATTTTCAACGAAGCCATGATCTTCTCTGTCCCATCCAATGTTCTGCAG phase 0 caab01001283.1 54323-54456 - GAACTCTCCCTGAGGGTAACAGTGGCGGAGACCACAGAAGACGGCCGCGGCGAGAACCTCGGTCACGTG ATCATCGGCCCAGAGGCCAGTGGGATGGGGATCACTCACTGGAACCAGATGCTGGCCACTCTGAGGAAG CCTGTGTCCATGTGGCACCCACTGCGCAGGATCTAG *** caab01001283.1 54572-54745 -------------------------------------------------------------------------------- 47. Danio syt13 Drsyt13 Complete amino acid sequence from 11 ests MLVSATALLGATLGTVSGVLTLCGLSLLCKSCKKGKLESGDEADPEKAKPSILHTLTQFS VHKCTEPIQPQASLKFPQIYRPKPSVTSQEVINYKEHGASNDTSAAELDTCNQATEREEV FSLPRQASADETPCTSEQTGAMTTSSSILYPKLHFSISLHKESGELHINIVEAENISVEA GCEGYISGCVSVSEEQKHAHTAVHKLAVHVQxGEELxFALPMEGTEDTDSLDGEVALSLH CCDRFSHNSTLGMMRFKLADVSMMLDADCWVDLQPPKQEVTSSTGELLLSLSYLPAANRL GVVVMKARGLQSDKLKDNIDLSVKLTLKHQNAKLKKKQTRRVKHKMNPVWNEMMMLELPS ELLAKSSVDLEVLNLASPGTLLPLGRCMLGLQTSGTGLQHWKQMLDNPRKQIAMWHPLYT -------------------------------------------------------------------------------- 48. Fugu syt16 Frsyt16 Size >11.3 Kb No transcripts Derived from similarity to other syts MASD^ ITPEAIGFLSTVGLVIVLLTIFLLFINKKLCFSRVGGLPCLEQNGHRKKRPGMRQGL^ VNSFGNEEDNGTTSSDSDGEILKQFEISRSQTFRAQASVRRERPRSVQTCSIDQEQEPVGSELS DRE^ GGDRRSNHVHLFLLSEMDAPSQHSGQDSLSAATAQREATPTPSLDRSVSLQLSTTAESPPPSVL QQAPESIKGAEAVDLDKNNDTDSLSTLSPE^ NPPPDEVSSLQDVASSAADISKCGDLLLSLEYRPNAEKLVVTTIAAQDVPDKARSGMDTWQ VRMVLLPYKKQRKKTSVQKGSLPHFNETFHFSGLHPSELHKMAIRFRLYALGGRVLRDRM IGEKVLRLDELQPEGGTTEMTLSLEPRSNLK^ TLSAQQSPFPDGALSSQSLAHGGVPELLLGLSYSATTGRLSVEIIKGSHFRNLAITKPP^ DTYARLSLLNSVGQETSRCKTSVRRGQPNPVYKETFVFQVALFQLSDVTLLVSIYNRRSMKRK EMVGWVSLGQNSSGEEERLHWEDMKEGRGQQVGRWHVLLEA - ATGGCCTCGGACA *** phase +1 caab01003812.1 (21598-21586) - TCACCCCCGAGGCCATCGGCTTCCTGTCCACCGTGGGCCTGGTCATCGTGCTGTTGACCATC TTCCTGCTCTTCATCAACAAGAAGCTGTGTTTCTCCCGGGTCGGCGGGCTTCCCTGTCTGGA GCAGAATGGCCACCGGAAGAAGCGTCCGGGAATGCGCCAGGGCCTGG phase +1 caab01003812.1 (15065-14895) - TGAACAGCTTCGGCAACGAGGAAGACAATGGCACCACCTCCTCCGACAGCGACGGCGAGATCC TGAAACAGTTTGAGATCTCACGCTCGCAGACCTTTCGCGCTCAAGCCTCAGTCCGCCGCGAGC GACCGAGGTCGGTCCAGACCTGCAGCATCGACCAGGAGCAGGAGCCGGTCGGCTCGGAGCTGT CGGATCGCGAAG phase +1 caab01003812.1 (13021-12821) - GAGGAGAC CGTCGTTCCAACCACGTTCACCTGTTTCTCCTTTCAGAAATGGATGCTCCCAGCCAGCACAGCG GCCAGGACTCGCTGTCTGCTGCCACCGCTCAAAGAGAGGCGACACCTACGCCCTCTTTGGACCG ATCCGTCAGCCTCCAGCTCTCAACAACCGCAGAGAGTCCCCCCCCGAGCGTCCTCCAACAGGCC CCCGAGAGCATCAAAGGTGCCGAGGCCGTGGACCTGGACAAGAACAATGACACGGACAGCCTCT CCACTTTGAGCCCCGAG phase 0 caab01003812.1 (12364-12084) - AACCCTCCCCCGGATGAGGTCTCCTCCCTGCAGGA TGTGGCTTCCAGTGCTGCTGATATCTCCAAATGTGGGGACCTGCTCCTCTCGCTGGAGTACCGCC CCAACGCGGAGAAGCTGGTGGTGACCACCATCGCGGCACAGGACGTCCCCGACAAGGCCCGCAGT GGGATGGACACGTGGCAGGTGCGCATGGTGCTGCTGCCCTACAAGAAGCAGCGGAAGAAGACGTC GGTGCAGAAAGGCTCGCTGCCCCACTTCAACGAGACCTTCCACTTCTCCGGGCTCCATCCCTCGG AACTGCACAAGATGGCCATCAGGTTCCGGCTGTACGCGCTGGGAGGGAGGGTTCTACGTGATCGG ATGATCGGCGAGAAGGTGCTGCGTTTAGATGAGCTCCAACCAGAAGGAGGGACCACGGAGATGAC CTTGTCACTGGAGCCCCGCAGCAACCTGAAG phase 0 caab01003812.1 (11426-10971) - ACACTCAGCGCCCAGCAGAGCCCCTTTCCCGACGGCGCCCTGTCCTCCCAGTCGCTGGCCCACGGT GGCGTTCCTGAGCTGCTGCTGGGCCTCTCCTACAGCGCCACAACGGGACGACTGTCGGTGGAGATC ATCAAGGGCAGCCACTTCCGAAACCTGGCCATCACCAAGCCCCCAG phase +1 caab01003812.1 (10891-10714) - ACACCTACGCCCGACTGTCCCTCCTGAACTCCGTGGGCCAGGAGACCTCGCGGTGCAAGACGTCGGT GCGCCGCGGCCAGCCCAACCCCGTCTACAAAGAGACGTTTGTCTTCCAGGTGGCGCTGTTCCAGCTC TCCGACGTCACGCTGCTCGTCTCCATCTACAACCGCCGCAGCATGAAGCGCAAAGAGATGGTGGGCT GGGTCTCGCTGGGCCAGAACAGCAGTGGCGAGGAGGAGCGGCTCCACTGGGAGGACATGAAGGAAGG TCGAGGACAGCAGGTCGGCCGCTGGCACGTCCTGCTGGAGGCGTAG *** caab01003812.1 (10623-10310) -------------------------------------------------------------------------------- 49. Danio syt16 Drsyt16 Size >42 Kb No transcripts Derived from similarity to other syts MASD^ ITPEAVGFLSAVGIFVVLLAILFLFINKKLCFARVGGLPCLEQYSRRKRRDRAGIHQGL^ VNSYGDDGEISSSSDSDDELAKHFEISVSRSQSFRSGVTEINPQNAPGQHHKFNRLLSDQEEGSTEPSDCE^ VCGDLIIALDYRAETHRLLVTVIMAQGIPDKARSGMDSWQVHVVLLPGKRQRHKTAVQKGSMP MFEETFRFSHLEPGDLPSSALRFRLYALGKMNRERMMGETLYRLSRLKHTGRFETTLVLEPRS NLK^ TVDAQTSLSTQTDSASSSLSVSHAGNPELLLGLSYNATTGRLSVEIIKGSHFRNFAVNRPP^ DTFGKLTLLNSMGQEISRCKTSIRRSQPNPVFKETFVFQVALFQLSDVTLMVSIYNRRNMKRKEMIGWVAL GQNSSGEEELLHWQDMKESGNQQVCRWHTLLDA - ATGGCATCAGATA *** phase +1 bx005106.4 169749-169761 - TCACTCCTGAGGCGGTGGGCTTCCTCTCGGCCGTGGGCATCTTTGTGGTCTTGTTGGCCATACTCTTC CTGTTCATCAATAAGAAGCTGTGTTTTGCTCGTGTCGGGGGCCTGCCCTGCCTAGAGCAGTACAGCCG ACGCAAGCGAAGAGACCGTGCAGGGATTCACCAGGGTCTGG phase +1 bx005106.4 181967-182143 - TGAATAGTTACGGCGACGACGGAGAGATCTCCAGCTCATCGGACAGCGACGATGAATTAGCCAAGCATT TTGAGATCTCTGTTTCCCGCTCTCAAAGCTTCCGTTCAGGTGTCACAGAGATTAACCCCCAGAATGCAC CAGGGCAGCATCACAAATTTAATCGTCTGCTTTCTGACCAGGAAGAAGGAAGCACAGAGCCGTCTGACT GTGAAG phase +1 bx005106.4 190788-191000 - TATGCGGTGACCTCATAATCGCCCTGGACTATCGGGCTGAAACCCACCGGCTCCTGGTCACCGTGATCAT GGCTCAAGGTATCCCAGACAAGGCCCGCAGCGGCATGGACTCCTGGCAGGTGCACGTGGTGCTGTTACCT GGCAAACGGCAGCGGCACAAAACGGCCGTCCAGAAGGGCTCCATGCCAATGTTTGAGGAGACCTTCAGGT TCTCACATCTGGAGCCCGGAGATTTACCTTCATCTGCTCTCCGCTTCCGGCTGTACGCGCTGGGGAAGAT GAACAGAGAGAGGATGATGGGAGAGACGCTGTACAGACTGAGCCGACTCAAACACACAGGACGATTCGAG ACCACACTGGTGCTGGAGCCACGCAGTAATCTTAAG phase 0 bx005106.4 207792-208177 - ACAGTAGACGCACAGACCTCTTTGAGCACTCAGACTGACAGTGCTTCCTCCAGTCTGTCTGTGTCTCACGC TGGAAATCCAGAACTGCTGCTGGGTTTATCCTACAACGCCACCACAGGACGACTTTCTGTGGAGATCATTA AAGGCAGCCACTTCCGTAACTTTGCAGTCAACAGACCTCCAG phase +1 bx005106.4 209787-209970 - ATACATTTGGTAAGCTCACTCTGTTGAACTCAATGGGACAGGAGATTTCCCGCTGTAAGACGTCGATCCGTC GCAGCCAGCCCAATCCTGTCTTCAAGGAGACGTTCGTCTTCCAGGTGGCGCTTTTCCAACTGTCTGACGTCA CGTTAATGGTCTCCATTTACAATCGGCGGAACATGAAGCGTAAGGAGATGATAGGCTGGGTGGCTCTGGGCC AGAACAGCAGCGGTGAAGAGGAGCTTCTTCACTGGCAGGACATGAAGGAGAGCGGAAACCAACAGGTCTGCC GCTGGCACACGCTGCTGGATGCTTAG *** bx005106.4 211467-211780 -------------------------------------------------------------------------------- 50. Danio syt14 Drsyt14 Size >59 Kb No transcripts Derived from similarity to other syts Nterm missing GERNCGVHELICIRK^ VSPEALGFLSGIGVFIFLVIVLFLYLNNKLSLESANQLPSLDQYRKSAEPA^ EKSYVNADYHCSSSDSDDEVIGQYQEAVSRSQGLRGGAARTNSRHQKGYGWDTRQKYSPLAAEYDGYSSEASADD^ VNCIQRMRRTPPLDELQPPPYQDEDGSPRMSCTPSDLGDAKCDLSHGSDSPRHSYGKCPSELSGAQ ETESFLNKGYEEDVPSDSTAVLSPE^ DLSARGSAAQLPKGYDPEPLAQYGTLDVVFDYDSSDQRLSISITALTDIPSLKRTGNISWQVHLVLLPTKK QRAKTIIQRGPCPVFTETFHFSHIESEMIGNYAIRFRLYSVRRMKKEKALGEKVFYLTKLNLQ GKMSVPIILDPYCNIP^ GSDSQASMSDVSCSETASSYPSAAQGSAPEILLGLVYNATTGRLSVEVIKGSHFKNLAANKPP^ [NGLFCCLKHLIGGQVYIIR^(D)] NTYVKLTLLNSMGQEMSKCKTSVCRGQPNPTYKETFVFQVALFQLSDVTLILSVYNKRSMKRKEMIG WISLGLNSSGEEELTHWTEMKESKGQQVCRWHSLLES - GTGGAGAGCGGAATTGTGGAGTACATGAGCTTATCTGCATCAGAAAAG phase +1 bx649520.1 119407-119454 - TGTCTCCTGAGGCTCTGGGGTTCCTGTCTGGCATCGGCGTGTTCATCTTTCTTGTGATTGTACTCTTT CTTTACCTCAATAATAAACTGTCACTCGAGAGTGCCAACCAACTGCCCAGCCTCGACCAGTACAGAAA GAGCGCAGAACCAGCAG phase +1 bx649520.1 130422-130574 - AAAAGAGTTACGTGAATGCGGACTATCACTGCTCGTCGTCAGACAGTGATGATGAGGTGATCGGTCAGT ACCAGGAGGCCGTGTCCAGGTCGCAGGGTCTCCGGGGAGGTGCAGCTAGGACAAACTCGCGTCACCAGA AGGGCTATGGATGGGACACACGGCAGAAATACTCCCCTCTAGCGGCTGAATATGACGGCTACAGCAGCG AAGCCTCCGCAGATGATG phase +1 bx649520.1 141754-141978 - TGAACTGCATCCAGCGGATGAGACGGACTCCACCATTGGACGAGCTGCAGCCTCCGCCCTATCAGGATGA GGACGGGTCACCGCGCATGTCATGCACACCCTCTGACCTGGGCGATGCCAAATGTGACCTTTCACATGGG AGCGATAGCCCCAGACACAGCTACGGGAAATGTCCGAGCGAGCTCAGTGGAGCCCAGGAGACAGAGAGCT TCCTGAACAAGGGCTATGAAGAAGATGTGCCAAGTGACAGCACTGCTGTACTCAGCCCAGAG phase 0 bx649520.1 149408-149679 - GATCTGTCTGCACGTGGATCTGCAG CTCAGCTTCCTAAAGGCTATGACCCAGAGCCTCTTGCCCAATATGGGACACTTGACGTCGTGTTTGACTA CGATTCATCTGACCAGCGTTTGTCCATCTCCATAACAGCGCTGACAGATATTCCTTCTCTCAAACGCACG GGGAACATCTCCTGGCAGGTCCATCTGGTGCTGCTGCCCACCAAAAAGCAAAGGGCCAAGACCATCATCC AGCGTGGCCCCTGTCCCGTCTTCACTGAGACCTTTCACTTCAGCCATATCGAGTCGGAGATGATCGGGAA CTACGCCATTCGCTTTCGGCTTTACAGCGTGCGCAGGATGAAGAAGGAGAAAGCTCTCGGAGAGAAGGTG TTCTACCTCACCAAACTCAACCTGCAGGGCAAGATGTCGGTGCCCATCATACTGGACCCCTACTGCAACA TACCT phase 0 bx649520.1 152092-152541 - GGCAGTGACTCTCAGGCAAGCATGTCAGACGTGTCGTGCAGTGAAACGGCCTCATCGTACCCGTCTGCGGC TCAAGGTTCTGCTCCAGAGATCCTGCTGGGTCTTGTGTACAACGCCACAACAGGACGCCTCTCTGTGGAGG TCATCAAAGGAAGCCACTTTAAAAACCTGGCTGCAAATAAACCTCCCA phase +1 bx649520.1 155086-155275 - [ATGGTTTGTTCTGTTGTCTAAAGCACTTGATAGGTGGCCAAGTGTACATAATCCGAG] phase +1 bx649520.1 104192-104248 - ATACGTATGTGAAGCTGACTCTGCTCAACTCAATGGGTCAGGAGATGTCCAAGTGTAAGACGTCTGTTTGC CGAGGCCAACCCAATCCCACCTACAAGGAGACTTTTGTTTTCCAGGTAGCTCTGTTTCAGCTCTCCGACGT CACGCTCATCCTGTCCGTCTACAACAAGCGCAGCATGAAACGCAAAGAGATGATTGGCTGGATCTCTCTGG GCCTCAACAGCTCTGGAGAAGAAGAATTAACTCACTGGACTGAGATGAAGGAGTCAAAGGGACAGCAGGTG TGTCGATGGCACAGTCTCCTGGAGTCCTAG *** bx649520.1 177992-178305 -------------------------------------------------------------------------------- 51. Fugu syt14.1 Frsyt14.1 Size >7.4 Kb No transcripts Derived from similarity to other syts MAID^ VSPELLGVLSSIAAFIALMALFFLYLSNKLSVETPDELSHLSSFNNNQQ^ VSAFSAQRDSCRRVRRTKVPRLRSSRTWHQPGAARSPLSREATGSEASSAAWSGPQKGSQKCPPLYW VESYFFTTQYVNANSVQLSASSIRTTRKGPSLNESQPPPYQDDGVALRASRSRSGGGVKR GSSPRGSDSPRCSSGASVDQDAESYLNKGCEEDIPSDSTAVVGPE^ DGSGLQLPTAYEPEPLGKYGTLDVAFEYDSSEQYLAVTVTAATDIPALKQTGNIAWQVHLVLLP TKKQRAKTGVQKGPCPVFTETFKFSRVEQEALGDYAVRFRLYSIRRMKKEKVLGEKVFYLTKLN LQGKIALPVTLEPGSELA^ GCGSLVSVSRSAGALSYRSSEDSSLPEILLGLIYNSATGQLSAEVIKGSYFKTAVSDKPV^ [TVLCAP[N/DGLFCCVKHFVGGQLYIIR^(D)] NTYVKLTMLDSKGKEMSKCKTAVCRGQPNPTYKETFVFQVALFQLSEVSLVLTVFCSRSSMRPRE RLGWVSLGLNSSSEEQQAHWTEMKEAEGQQVCHWHTLAVT - ATGGCGATTGACG *** phase +1 caab01000899.1 33784-33796 - TCTCTCCTGAGCTTCTGGGCGTCCTGTCCTCCATTGCGGCCTTCATAGCGCTGATGGCTCTGTTTTTT CTTTACCTCAGTAACAAGCTGTCAGTGGAGACTCCCGATGAGCTGTCACATCTCAGCAGCTTTAACAA CAACCAGCAAG phase +1 caab01000899.1 37572-37718 - TCTCTGCGTTCTCTGCTCAGAGGGACTCGTGTCGGAGAGTGAGGAGGACAAAGGTCCCGAGGCTGCGGTC CAGCAGGACATGGCATCAGCCTGGAGCAGCAAGGAGTCCGCTGAGCAGGGAGGCTACAGGCAGTGAAGCG TCCAGCGCAGCATGGTCAGGTCCACAGAAAGGTTCCCAAAAATGTCCTCCCCTTTACTGGGTTGAATCCT ATTTTTTCACTACTCAATACGTTAATGCTAATTCTGTACAACTATCAGCCAGCAGCATCCGGACCACTAG AAAGGGCCCCTCCCTCAATGAGTCGCAGCCTCCCCCCTATCAGGACGATGGCGTCGCCCTGCGCGCTTCT CGTTCCCGCTCGGGGGGAGGCGTCAAGAGGGGGTCGTCCCCGCGTGGCAGCGACAGCCCACGCTGCTCCA GCGGCGCCAGCGTGGACCAGGACGCGGAAAGCTACCTCAACAAAGGCTGTGAGGAGGACATCCCCAGCGA CAGCACGGCTGTGGTGGGACCAGAG phase 0 caab01000899.1 38963-39477 - GATGGTTCCGGTCTTCAGCTTCCAACGGCCTACGAGCCGGAGCCGCTGGGGAAATACGGCACCCTGGACG TGGCCTTCGAGTACGACTCCAGCGAGCAGTATTTGGCCGTCACGGTCACGGCGGCCACGGACATCCCGGC TCTCAAACAGACGGGCAACATCGCCTGGCAGGTGCACCTGGTCCTGCTGCCCACTAAGAAGCAACGCGCC AAGACCGGCGTGCAGAAGGGCCCCTGTCCCGTCTTCACGGAAACGTTCAAGTTCTCCAGGGTGGAGCAGG AGGCGCTGGGGGACTACGCCGTTCGATTTCGTCTGTACAGCATCAGGAGAATGAAGAAAGAGAAGGTCCT GGGTGAGAAGGTCTTCTACCTGACCAAGCTCAACCTGCAGGGCAAGATCGCGCTGCCCGTGACCCTGGAG CCGGGCTCAGAACTGGCA phase 0 caab01000899.1 39552-39989 - GGTTGCGGCTCACTGGTGAGCGTGTCTCGCAGTGCTGGAGCTCTGTCCTACCGCTCCTCGGAGGACTCCT CATTACCAGAAATCCTCCTGGGTCTCATCTACAACTCCGCCACCGGGCAGCTGTCGGCCGAGGTCATCAA GGGAAGCTACTTCAAAACAGCGGTGTCGGATAAACCCGTCA phase +1 caab01000899.1 40076-40256 - [CTGTGCTGTGTGCCCCAG]ACGGCCTTTTCTGTTGTGTGAAACACTTTGTAGGAGGGCAGCTTTATATC ATAAGAG] phase +1 caab01000899.1 40468(40486)-40542 - ACACCTATGTGAAGCTGACAATGTTGGACTCCAAAGGCAAAGAGATGTCCAAGTGTAAGACGGCGGTGTGC CGCGGCCAGCCCAACCCCACCTACAAGGAGACGTTCGTGTTCCAGGTGGCGCTCTTCCAGCTCTCCGAGGT GTCGCTGGTACTGACGGTGTTCTGCTCCCGCAGCAGCATGAGGCCCAGGGAGAGGCTGGGCTGGGTCTCTC TGGGCCTCAACAGCTCCAGCGAGGAGCAGCAGGCCCACTGGACAGAGATGAAGGAGGCCGAGGGTCAGCAG GTCTGCCACTGGCACACGCTCGCCGTCACATAA *** caab01000899.1 40872-41188 -------------------------------------------------------------------------------- 52. Fugu syt14 Frsyt14 Size >4 Kb No transcripts Derived from similarity to other syts N term missing WFPLECPARCLIWGDAKCDLSHTSGSPHLSFSKCPSEGSDDHESYFNKGYEEDVPSDSTAVLSPE^ DMSAGGSAAQLPKGYEADPVAKYGTLDVVFDFVSEEQQLSVTIMAVADLPALKRTGSDSWQVHLV LLPTKKQRAKTGIQRGPCPIFTETFHFSQVESEMIDNYAIRFRLYSLRRMKKEKVFGEKVFYLTK FNLQGKMSMPVMLEPCCALP^ gap [TVPPLLS[D/NGLFCCLKHFIGGQVYIIR^(D)] TYVKLTLLNSMGHQMSKCKTSICRGQPNPTFKETFLFQVALFQLSDVTLILSVYSRRSMKRKEMIG WISLGLNSSGEEELTHWTLMKESKGQQVCRWHSLLES - AATGGTTCCCCCTCGAATGTCCTGCACGTTGTCTGATCTGGGGCGATGCCAAGTGCGACTTGTCCCA CACCAGTGGAAGTCCCCACCTGTCCTTTAGCAAGTGTCCCAGTGAAGGCAGCGACGACCATGAGAGT TATTTCAACAAAGGCTACGAAGAGGACGTGCCCAGTGACAGCACAGCTGTCCTCAGTCCAGAG phase 0 caab01005128.1 82-278 - GATATGTCAGCTGGTGGATCAGCAG CTCAGCTCCCTAAAGGCTATGAAGCAGATCCAGTGGCCAAATATGGAACTCTGGATGTGGTCTTTGAC TTTGTGTCAGAGGAGCAGCAGCTGTCAGTCACCATCATGGCAGTAGCAGACCTTCCTGCCCTCAAACG CACTGGCAGCGACTCCTGGCAGGTCCACCTGGTGTTGCTACCCACCAAGAAGCAGAGAGCCAAGACAG GAATCCAGAGAGGTCCGTGTCCCATCTTCACAGAGACCTTCCACTTTAGCCAGGTGGAGTCGGAGATG ATCGACAACTACGCCATCCGATTCCGTCTCTACAGTCTGCGGCGGATGAAGAAGGAGAAGGTCTTTGG GGAAAAGGTGTTCTACCTCACCAAGTTCAACCTTCAGGGCAAAATGTCCATGCCGGTCATGCTGGAGC CCTGCTGTGCCCTCCCA phase 0 caab01005128.1 341-790 - gap - [CTGTCCCACCCTTGTTGTCAG]ACGGACTGTTCTGTTGCCTCAAACACTTTATAGGTGGGCAGGTTT ATATAATCAGAG] phase +1 caab01005128.1 1501/1522-1578 - ATACATACGTCAAGCTGACCTTACTGAACTCCATGGGCCACCAGATGTCCAAGTGTAAGACGTCCATC TGCCGAGGACAGCCCAACCCCACCTTCAAAGAGACCTTTCTCTTCCAGGTCGCCCTTTTCCAGCTGTC GGACGTGACGCTCATCCTGTCCGTCTACAGTAGACGCAGCATGAAGCGTAAAGAGATGATTGGCTGGA TTTCCCTGGGCCTCAACAGCTCTGGGGAGGAGGAGCTGACCCACTGGACCCTGATGAAAGAGTCTAAA GGACAGCAGGTCTGCCGTTGGCACAGTCTGTTGGAGTCCTAA *** caab01005128.1 3646-3959 -------------------------------------------------------------------------------- 53. Mus syt1 Mmsyt1 Abundance high Chromosome 10 Size large (draft) Transcript complexity affecting 5'UTS, Nterm and pre-C2A MVSASRPEALAAPVTTVATLVPHNATEPASPGEGKEDAFSK]LKQKFMNELHKIP^ - alt.Nterm LPPWALIAIAIVAVLLVVTCCFCVCKKCLFKKKNKKKGKEKGGK]NAINMKDVKDLGKTMKDQ^ - alt.Nterm ALK]DDDAETGLTDGEEKEEPKEEEKLGKLQYSLDYDFQNNQ^ LLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFK^ VPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEE^ QEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLS^ DPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQ^ KVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEEVDAMLAVKK - start1 GCGGCCGCCTCCTCACTGGAGGGATTCCTGGAGAAGCTGCAGTGTGGGGATGCTCTGACCGAGTTCAGCC CCCAGTGTCTTTCCTCCTCCTCCTCCTGCAGCGACAGCATCCGCAGTTAGCAGTGGGCAACTTGAG#GCTG TAACCGGGGCAAGCCCCCAGGGTCCTGCTCACCCAACAGGGGGCTCAGGTCCCCGAAGGG[GTGTGTGCA GGGCGGGGGCGGCCAGCTGGGACCAGCTGGTGGCCCTAGAAAACCTCACCCACACCCACACCCACACACC CCTTTTGTGTTGCAG]GCTGCCCCTCTGAGAGCGGAGGCAGCGAGAGAGTACTCGTGTGCCTCGCACCGG TCCGCGGTGAGAGCAGCGGGGACCAAGACTCGCACCATCTCCCGGTCGGTCCTCGCTCCAG ac122472.2 (219464-219056) but region (219264-219171) sometimes spliced out - start 2 CAGTTCTATGTAACAGGAGGGCAATGCAACCGGGTTCTGCAGGAGCAAAGCGAAAGCAGGAGATGCTGGT TCCAAGATAAATCTTTCTGATGTATCAGGAGAGACGCCAAGTCGTAGGTTTTTTTTTTCTAAATGCCCAT TTGAGATAAGAAGAGGGGGTCTTCCCTTTTTAAGTCTCTCTCAACTCCCACACCAGCCTGGGTACCGCAG ac122472.2 (217581-217372) - Mus specific, often skipped [TTTCCCTCTGAATCCTACACTTCATATGTAGACACCTTACTCAACTGGCATTTGTTAGTCAAGTCTCCTC TGCATCCAAG] ac122472.2 (202397-202318) - GAAAAGAAGACTTTGGCGCGCTCGAACAACCAACATCCGCAGTCTGATCAGAAGACATTGCCCTTGCCGT CCCGAGAGCTCCAGCAGAACATCTCGTTAAG ac117199.3 (132669-132569) - ATTGAAGAAAG%GAGATTCCAAAAGGAACAAAAAAACCCAAATACTCCAGACTACCCCAGCAGAACA ac117199.3 (61549-61484) - splice can occur from upstream (join # above and below) to create alt. translation start TTCCGCTTGAACCAAAAATGGTGAGTGCCAGTCGTCCTGAGGCCCTGGCTGCCCCTGTCACCACTGTTGC *** GACCCTTGTCCCACACAACGCCACTGAGCCAGCCAGTCCTGGGGAAGGGAAGGAAGATGCCTTTTCCAAG #CTGAAGCAGAAGTTTATGAATGAACTGCATAAAATCCCAT *** ac141899.2 56990-57169 phase +1 - splice can occur from upstream (join % above and below) to create alt. translation start TGCCACCGTGGGCCTTAATTGCCATAGCCATAGTTGCGGTCCTTCTAGTCGTGACCTGCTGCTTCTGTGT CTGTAAGAAATGTTTGTTCAAAAAGAAAAACAAGAAGAAGGGAAAGGAAAAGGGAGGGAAG%AACGCCATT AACATGAAAGACGTGAAAGACTTAGGGAAGACCATGAAGGATCAG *** ac141899.2 38019-38203 phase 0 - GCCCTTAAG]GATGACGATGCTGAAACTGGACTGACTGATGGAGAAGAAAAGGAGGAGCCCAAGGAAGAGG AGAAACTGGGAAAGCTTCAATATTCACTGGACTATGACTTCCAGAATAACCAG ac141899.2 43744/43753-43866 phase 0 - CTGCTGGTGGGAATCATCCAGGCTGCTGAACTGCCCGCCCTGGACATGGGAGGCACATCTGATCCATACG TCAAAGTCTTCCTGCTGCCCGACAAAAAGAAGAAGTTTGAGACAAAAGTCCACCGGAAAACCCTCAATCC AGTCTTCAATGAACAGTTTACTTTCAAG ac141899.2 48454-48621 phase 0 - GTGCCATACTCGGAATTAGGTGGCAAGACACTGGTGATGGCTGTGTATGATTTTGACCGCTTCTCCAAGC ACGACATCATTGGAGAGTTCAAAGTTCCTATGAACACCGTGGATTTTGGCCACGTCACCGAGGAGTGGCG CGATCTCCAGAGTGCTGAGAAAGAAGAG ac141899.2 23797-23964 phase 0 - CAAGAGAAACTGGGTGACATCTGCTTCTCCCTCCGCTACGTCCCTACTGCCGGCAAGCTGACTGTTGTCA TTCTGGAAGCCAAGAACCTGAAGAAGATGGATGTGGGTGGCTTATCTG ac141899.2 194317-194434 phase= +1 - ATCCCTATGTAAAGATTCACCTGATGCAGAACGGCAAGAGACTGAAGAAGAAAAAGACAACGATTAAGAA GAACACACTTAACCCCTACTACAATGAGTCCTTCAGCTTTGAAGTTCCGTTCGAGCAAATCCAG ac124436.4 (18789-18656) phase 0 - AAAGTGCAAGTGGTGGTAACTGTTTTGGACTATGACAAGATTGGCAAGAACGACGCCATCGGCAAAGTCT TTGTGGGCTACAACAGCACCGGCGCAGAGCTGCGACACTGGTCAGACATGCTGGCCAACCCCCGGCGACC CATCGCCCAGTGGCACACTCTGCAGGTAGAGGAGGAGGTTGATGCCATGCTGGCTGTCAAGAAGTAAAGG *** GGAAAAGAAGCCTTTCTGCGTCTGCCCACATAGTGCTCTTTAGCCAGTATCTGTAAATACCTCAGTAATA TGGGTCCTTTCAGTTTCCAGCCATGCATTCCTGATACAATCCAGTGGTACTTCAGATCCTGTTTTAATTT GCACAAATTTAAGTGTAGAAAGCCCCTATGCCCTTCATCATACCACTGCCCTCCAAATCTACTCTTCTTT TAAGCAATATGATGTGTAGATAGAGCATGACTGAAATGTATTGTATCACACCGTTGTATATACCAGTATG CTAAAGATTTATTTCTAGTTTGTGTATTTGTATGTTGTAAGCGTTTCCTAATCTGTGTATATCTAGATGT TTTTAATAAGATGTTCTATTTTAAACTATGTAAATTGACTGAGATATAGGAGAACTGATAATATATTATA TGGTAAATATAGTATCGTCTGCATTCCAGCAAAAATATCAATTTGAAAGGCACTAGTACAGTTAAACCAA CATCTTAAAGGACAACTTAAACCTGAACTTTCTATTGAATCCTTTGAGTACCAAGATTTGCTCACATGAC ATCTTTGATGGGTGAACCCAATTTTGTAGAATTCTTTCACAGGCAAATAGCATGTTCTGAGCAGCATCCA TGCTGACCTCAAGGAAGCAAAGCCACAAACCAGAATAGCATCTGTCTGTCTGTCTCTGCAAAGCTAAAAA ATCATGGCTTCACTCTTCCAGTCAAGGAAGCAACGAACACGAAGGAGCCAGTGAGTTCCTACGACTGCAT CTAGCATAGCATAACCGTGGTGTTCTCTGTGTGTGCGTGTGCAAGTGTGAAAGTGTATGCACGAGTCTTA TGTGTGGTGCATGCCTTTGTTCGGGGTTGGGGTGGGAGAGGAGAAGCTGAGAGAAGTCAGCGTTTCTGAA ATGTTGCCTGACTACTTAAACAGAAACTAATAGCTCTCCAGTATCACATTTATATAACACGTGCAACCTG GGAATTCTGGTCCAGATTTCACCCCAATATTGATTCCAAAAGGTATGCACGTGAGACTTTGTAACAAAAT ATTTTATTATATAAAACCAGATTAGAAGGAATGCAGAATATTTTTAACACAGCAATCTGTGCTTATTCCA CAACATTACTTTGTGGTAAACAGACAGTATTGTAATCCCATGAAAAGATGAAATATAACAATTAGCCATA GTTCTGAATGCACTTCGATTAAGCCAAAACAGACAGCTAGTGATCTTTTTATATGCTCTTTTTACTTAAG TTTTAATTTGTCCTTTAAACAAAGGTGAAAAAAAAAACCAAGAACAAGTTCTAGCAAACTGAAGCAACCT CTTATGTACACTAGATGCTTGACTTAGGAGGAGTTTTTAAATGTTCTCAATGTTATTCTGTAGTAAATGG CACTATTATGAAGCCACTAGTCATTCCATATGAGTCTTAAGGACTGCTCTGTGTAACACTGTGACTGCCC TGTGTGCTTAGACACGTAGTTTCCTCAGTGGCTAGCACCCAACTTACTCCGTAGTGATATTGTAACAATA CTGCCATTCCCTCGTACTGCACTGCCCAATGTGTGTGTAGCACAAACAGTTCTCATTCTTAAGGACCAAT TCAGAACTGAACAGCTATGCATAGGACAGAAAGATACATAGACTGGGGGGGTGGGGAGAACACACAGCAT CTTGTCAACACTGTGCACTAGTCCACATTTGTCTCGCTGAGGTAGACAGCCACTTCAGGAAGGTGAGCCT GCTACCTAACACTGCTTCTAGACTCTTCGCCCACTTGATAGTGCGGCCTGTTTTCACCTCCAGGTCACAG AAAACAGCAACATCCTGACGGGAGAGGACCATCTTCACATCTACCAAAATAAAATGGAGGCATGGAAAGT GTGGCCTCCTGTTTGATCTATAGGATTTAGCTCCATGCTTTGGACAAAAGTCAAGAGAATCCCAGAAAGG GCTCTTGGTAGACTTTAAACATGGGGTTGGCCGTTCCTCCTGCACACACAACACAATCTCCAAACCCTGG TTCTTCCCTCATTGGAGAAGAGGCAAAGCCTTTGCTCCTCACCTCCATCCCAGCAAACTCTTCAGAATTA GAACAGATGCAGAGGACAAGGAGAAAATCCTTTCCTGTGGACGAACAGCACATTTTCAACATTAAAACCA CAGATGATAGGAAAGGCACACTCATAGGTGAGATTAAACAGGAGACTCAAATGAGGGGCTTTCCTACTTA AGGGACCAAGTCCTACCAAAGAGAAGGAGTTGACTTTAAAAAAAAAAATACCTTAGATACCAGACACCGA CATTTCGGTTCACCACCTCCCGACTTAAGTTGTACACGGTGGAGCAACATTTCCAAGGAAGCAGCTTCCA GCTGCCCAAGCAGACATTCCTTCCTGCATCACAACACTACTAGCACATTCTCTTGCAACACTGCCAACGT GGGATTGTCACCATAGACTTAGTTGGTACTATATCATCTCCCATGAGCCGGTGACTGGACCTGCTTCCTG ACCTGCCATCCATCCTCAGATGAGCCACCTGTACCCTTCTGACAGTGCAGTGTGAAGTCTTAGAAGCTGA TGCCCTAGAAAGATCCTAGTTGCCTTTGTTGCATATATTTACTGCCTGCTTGAGTGTTTCTCTGTGTGGG TTCTCTCTGTGTCTCGTAGAAATGTTGGGGTGTTTTCTTCTGCCATAAGGGCTCGTGGCCCGCGAGCCAA CTCCTTTAGCTGTATTCTTCCTTCATTTTTTGATAAGTGGTTTAAATTCTGTTTCACTTTGTGTAGTGAA CCCCATGGTAGTTTTCTGATCGTTGTTAAAAAAAATGACTTAACATATTACATGGACACTCAATAAAAAT GTTTTATTTCCTGTT ac124436.4 (15005-11911) -------------------------------------------------------------------------------- 54. Mus syt2 Mmsyt2 Abundance moderate Chromosome 1 Size medium (draft) Transcript complexity affecting 5'UTS MRNIFKRNQEPNVAPATTTATMPLAPVAPADNSTESTGPGESQEDMFAKLKEKFFNEINKIP^ LPPWALIAMAVVAGLLLLTCCFCICKKCCCKKKKNKKEKGKGMKNAMNMKDMKGGQ^ DDDDAETGLTEGEGEGEEEKEPENLGKLQFSLDYDFQANQ^ LTVGVLQAAELPALDMGGTSDPYVKVFLLPDKKKKYETKVHRKTLNPAFNETFTFK^ VPYQELGGKTLVMAIYDFDRFSKHDIIGEVKVPMNTVDLGQPIEEWRDLQGGEKEE^ PEKLGDICTSLRYVPTAGKLTVCILEAKNLKKMDVGGLS^ DPYVKIHLMQNGKRLKKKKTTVKKKTLNPYFNESFSFEIPFEQIQ^ KVQVVVTVLDYDKLGKNEAIGKIFVGSNATGTELRHWSDMLANPRRPIAQWHSLKPEEEVDALLGKNK - CGATCAGCCCCTCCCTCCGCCCGGGCGCAGACTGCTAAGCTCAGCAAGTCTTGCGGCAAAGGCACTTCGG AGAGGAGTTGGACCCGGGGCGGAGTGGGGACTCCGCGCCCCCAGGGAACGGCCACCGCCGCTGGACCGCA GTCAGCGCCGCATCCCTGCAGCCGGTCGCTGCCTCCCGTCGGGGACAGCGGATCTCTCCTGCCGCGTCGG GGTCGCCCTCGG ac122771.3 148194-148415 - Mus specific, often skipped [GTTCCAGCAGAAGACGTGGTCCAGACTGGAGCTGGGTCCCACTTCAAAAGATCTGGATTAGCTGGGGCAG TGGTGGCACATGGGATTAATCTCAGCAATTGGGAGACAGATCTCTTGTGAGTTTGAAGACTGCCTGGTTT ACAGAGCAAGTTCCAGGACATCTAGGGTTACACAGTGAGTCCTGTTTTGAAATAAAAAATGGATTAAAG] ac131591.4 (216903-216695) - start 2 GCGGGAGGAGAGCCGCAGCGCTGGCCGGCGCGGGAGTGGGAAGAGGGGACCTGGACTTCGGGGCGGCAGA CTCCCGCTGCCTTCTGCACCAGCCCACGCCGAATCGGCTCCCGGACCGTCCCCGG ac131591.4 (202505-202381) - CTATCCCCTCTGCCACCATGAGAAACATCTTCAAGAGGAACCAGGAGCCAAATGTGGCTCCGGCCACCAC *** CACTGCCACAATGCCCCTTGCACCCGTCGCACCTGCCGACAACTCTACAGAGAGCACGGGTCCTGGGGAG AGCCAAGAAGACATGTTCGCCAAGCTGAAGGAGAAATTCTTCAATGAGATCAACAAGATCCCCT ac131591.4 (96819-96616) phase +1 - TGCCCCCCTGGGCTCTGATCGCCATGGCTGTGGTTGCTGGCCTCCTGCTGCTCACCTGTTGCTTCTGCAT CTGTAAGAAGTGCTGCTGCAAGAAGAAGAAGAACAAGAAGGAGAAGGGCAAAGGCATGAAGAACGCCATG AACATGAAGGACATGAAAGGGGGCCAG ac131591.4 (95844-95678) phase 0 - GATGACGATGATGCAGAGACAGGCCTGACTGAAGGAGAAGGTGAAGGCGAGGAGGAGAAAGAGCCAGAGA ACCTGGGCAAATTGCAGTTTTCTCTGGACTATGATTTCCAGGCCAACCAG ac131591.4 (94144-94025) phase 0 - CTCACCGTGGGTGTCCTGCAGGCTGCGGAACTCCCAGCCCTGGACATGGGTGGCACATCAGACCCTTATG TCAAAGTCTTCCTCCTCCCAGACAAGAAGAAGAAATATGAGACTAAGGTGCATCGGAAGACGCTGAACCC AGCCTTCAATGAGACATTCACTTTCAAG ac131591.4 (93694-93527) phase 0 - GTGCCATACCAGGAGTTAGGAGGCAAGACCCTGGTGATGGCAATCTATGACTTTGACCGCTTCTCTAAGC ATGACATCATCGGGGAGGTGAAGGTACCCATGAACACAGTGGACCTTGGCCAGCCCATCGAGGAATGGAG AGACCTACAAGGCGGAGAGAAGGAAGAG ac131591.4 (93270-93103) phase 0 - CCAGAGAAGTTGGGTGACATCTGTACCTCCTTGCGCTACGTGCCCACAGCTGGGAAGCTCACCGTCTGTA TCCTGGAGGCCAAGAACCTGAAGAAGATGGATGTAGGGGGCCTTTCAG ac131591.4 (91924-91807) phase +1 - ACCCCTATGTGAAGATCCACCTGATGCAGAACGGTAAGAGACTCAAGAAGAAGAAGACGACAGTGAAGAA GAAGACCCTGAACCCCTACTTCAACGAGTCCTTCAGCTTCGAGATCCCCTTTGAGCAGATCCAG ac131591.4 (90900-90767) phase 0 - AAAGTCCAGGTGGTCGTCACCGTGCTAGACTACGACAAACTGGGCAAGAATGAAGCCATCGGAAAGATCT TTGTAGGCAGCAACGCCACAGGCACCGAGTTGCGGCACTGGTCCGACATGCTGGCCAACCCTCGGAGGCC CATTGCCCAGTGGCACTCTCTTAAGCCTGAGGAAGAAGTGGATGCTCTTCTGGGCAAGAACAAGTAGGCT *** CCAGCGGCCGGGGCCACGCCCCTAAGGAGCCACGCCCCCGAGGCGCCACGCCCCCTGAGGACACTGACGA GATCCAGAGCTATCAATACCTCAGTTACGCGACCTTAGAGGTTTCTTCATTTGTTTGCGGTGTGTCCTGT TTTTCCTTCCTTTTTCTCTTTTTAAAGACCAACTTCCTTTTGGTGGCTGTGTGAAGAGAGTCCCCTAAGA GGTGAAAGAAAAGCCTGGCTCTGTTATTGACCCCGGAGCGGCCCTTGTTGCATGCCCTTTCACGGTTTCC CCCTTACCCCAAGTGGGGCCCTCTACTGTCAGACAGTTGAAGCACTAACTGCTTTTCCTGGGTTTTGGAC CAACAACATGGCAAGCACATTCTGTTTCTTGACTGTGAAGGCAACATAGTGGCCAGCATTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACCTGTATGTGCCCATCCATCCCCATCTGCCTGT TTTGAACATCTCTCTTCATTTTCTGGAATGAGTCATGGACAGTGAAGCCATGTGAGAGGAGAATGTCTTC AGAGACTCCAAGGGAAAGCAAGCCCACTGCCTAAGCGGTCAGATGCCAGAAGAGAGCTTGCGGATGGCCA TTTGGAAGGCGGCGAGATGTGATACTGGATGGGTTCAGAACTGGGACCAAAGCCCTTGATGCCATCATAG ACACCCTCTTGTCAGTCATGGCTTTCCCCCCTGGAGTGGGGTTTTGGGGACATTCGTGGAAATCAACTAT TCACCAGATTTGCCAGACTCTACCAGGGACTGCCAGCCCTGGGATGTCACTCCTGTTGACAACATCAAAC TTTGAAGAAACAGAAGTCCCATTACTCAGAAAGCCTAGAATTAAGCTCCTGGATCTTTGCCTCGTCCCTC GTCCCTGCAGAGTACAAGCAGCGCGGTCATTTGCATTCACGCACCATCTTGCTTTTGCCTCTGTTTCCCT TTTTGTGTAAGTGGAAAAATACCATCTGAAGACAAGTGCTTTGCACAGAGCCAGAGACCTGTTAAGGGGA TGCTTGGGTTTTAGTTCCCTTGAGGTCCAGGTAAGGAGGAGGTGTCAAGAAGGGGAGCTTGGGTGGACAG TGACAAACTGGAGAGTGCAGAGCTCCTCGCAACTCCCATTCCTGACCCTCTGGACCCTTTGACCCTCAGT GATGGTAGCTGGAGTGGCCCCGGCCAAACTGTGGAGAGGCCCCACGCTTCCGTTCCTTAGAGACAGTTTT CTTGGAATGCCAGGAAACACGGGGCATTCATTTCAAATGGGCGGTGGAGAAAATGTGCTAAGGTTTGCAT CCTGTGTTTAGTTTGTGTTTCCTTCCCTGTCCCCTACTTGTCCCTAGCATTGATTAAAAAGCCATATATA TGTTAGTCAGGCTTGCACTAAGTACCCTTCCCAACCTGCAGCCTGGGCAGGGGGCTTAGGCTCCCTGTAG CCAGAGGCTGCTCCTTTCCCTTGGTCTTGGATTTGTTCTTGAATCTCTCAGGCCCTTGTTTTCTTATCAC AGAAAAGATACAGCTTTTCTGAAGCCGGCAGGGGTGGTGGACACGCTCTTCAACAGCAAATGTGTCAGGA CATCTGCTCTGCCCCACCTGGGCCCTTCCGTTTCTTGTAGGACTCAGAGATGGATGGTGTTGTAGAGTTT GAGAACCCAGCATGGAGAAGCTGCAGTGGCTTCATTTTAATTTTAGTGAAAATGCATATGTGGGTTTGCT TTGCTTTTTTGTTTTTGTTTTTTTGTTTTGGTTTAAGTAGGGAGTGAGGTATCACTTCTACCAGAAACAG AACTGTGAAGTAGGTTTGACCTGCCTCTCTTTTAGAGACCCTTTTTGCTATTGGCCCTTGGTACCTGGGA AATTGTGTATTTCATACACTATCTGTATGTGTGTTTATGCTAAACACTGAGGAAGGAGGACTCTGGTAGG ATTATGGGCTGTAGTCCTTGGGACCAGAGTTCTGGTCATGGTAGAACATTGTTGGGCATCGGGTACACTC AGAGTTCAGGTGGTTAGAGAGTGTCAGGGTCCTGGTATGGACATCTG ac131591.4 (90179-87893) -------------------------------------------------------------------------------- 55. Mus syt3 Mmsyt3 Abundance moderate Chromosome 7 Size small (draft) Transcript complexity affecting 5'UTS MSGDYEDDLCRRALILVSDLCARVRDADTNDRCQEFNELRIRGYPRGPDA^ DISVSLLSVIVTFCGIVLLGVSLFVSWKLCWVPWRDKGGSAVGGGPLRKDLAPGVGLAGLVGGGGHHLG ASLGGHPLLGGPHHHGHTAHHPPFAELLEPGGLGGSEPPEPSYLDMDSYPEAAVASVVAAGVKPSQTSP ELPSEGGTGSGLLLLPPSGGGLPSAQSHQQVTSLAPTT^ RYPALPRPLTQQTLTTQADPSTEERPPALPLPLPGGEEKAKLIGQIKPELYQGTGPGGRRGGGSGEAGAP CGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTK^ VHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGS^ EKADLGELNFSLCYLPTAGRLTVTIIKASNLKAMDLTGFS^ DPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYD^ CIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVE^ EKTLSSFTKGGKGLSEKENSE - start1 GAGGAGCCAGGCGGGCACCGCGGCAGCGGGCAGGCGGGCGCGCGCGCGCTCCGGGCTGCAGCAGCCGGGG CTCCG ac079527.1 157091-157165 - ATCAGTCACCAGCCCCCCTTCTTGCCACCTGGCAAGCGTGGAGACCGGTCCGCAGCGGCTAGGCTCGTCC ACCCTGCAATCCCCATGGGCTACCGCCCCCCGCCGCCTCGGCTGCCACCCAGGACAAGGCAGGGGTAAGC ACAG ac079527.1 157795-157938 - start2 including above exon TGGTGCGATAAAGCTGCAGTAGCACTAGCAGCAAGACCAGCTGGGAGTTGTAGTCCCTAAGCTTTTAACT AGCTGCTGGGGGCACGGAGGTGGGAGGGGGCGGCTGGACCTCACCGGGGTCATCTGGGGTCGCGCAGCTA CTTCGAGTCGGGCAAGATGCAAAGCTTGGGCTGATTTTTTCCCTCCCGATTTGGGTCCCTAGATCAGTCA CCAGCCCCCCTTCTTGCCACCTGGCAAGCGTGGAGACCGGTCCGCAGCGGCTAGGCTCGTCCACCCTGCA ATCCCCATGGGCTACCGCCCCCCGCCGCCTCGGCTGCCACCCAGGACAAGGCAGGGGTAAGCACAG ac079527.1 157593-157938 - CTCTGCCCACCCCACTCTTAAGTATAG]ATCACGTGGCCACTATGTCTGGGGACTATGAAGATGACCTCT *** GTCGGCGGGCGCTCATCCTGGTCTCAGACCTCTGTGCACGGGTCCGAGATGCTGATACCAATGATAGGTG TCAAGAGTTCAACGAACTGCGGATCAGAGGATATCCCCGGGGTCCGGATGCAG ac079527.1 158918/158946-159110 phase +1 - ATATTTCCGTGAGCCTGCTGTCAGTCATCGTGACATTCTGTGGCATCGTCCTCTTGGGTGTCTCCCTCTT CGTGTCCTGGAAGTTGTGCTGGGTGCCCTGGAGGGACAAAGGAGGCTCAGCAGTGGGTGGTGGCCCCCTG CGCAAAGACTTAGCCCCTGGGGTTGGGCTGGCAGGCCTGGTAGGAGGTGGTGGGCACCACCTAGGAGCCA GCCTCGGTGGTCATCCCCTGCTGGGTGGCCCACACCATCATGGGCACACAGCCCACCATCCACCATTTGC GGAGCTGCTGGAACCAGGTGGTCTTGGGGGCTCTGAGCCGCCAGAACCTTCCTACCTGGACATGGACTCA TATCCAGAGGCTGCTGTGGCCTCTGTGGTAGCTGCTGGAGTCAAACCAAGCCAGACATCCCCTGAGCTGC CTTCTGAGGGTGGAACAGGTTCTGGGCTGCTCCTGCTGCCTCCCAGTGGTGGGGGCTTACCCAGTGCCCA GTCTCATCAGCAGGTCACAAGTCTAGCACCCACCACAAG ac079527.1 163502-164030 phase +2 - GTACCCAGCCCTGCCTCGGCCCCTCACCCAGCAGACCCTGACCACCCAAGCAGACCCAAGCACTGAGGAG CGACCGCCTGCACTGCCCTTACCTCTGCCGGGTGGAGAGGAAAAAGCCAAGCTCATCGGTCAGATCAAAC CAGAGCTGTACCAGGGCACTGGACCCGGTGGTCGGCGAGGCGGGGGCTCAGGGGAAGCAGGGGCACCCTG TGGCCGCATCAGTTTTGCCCTCCGGTACCTCTATGGTTCTGACCAGCTCGTGGTGCGGATCCTACAGGCC CTGGATCTCCCAGCAAAGGACTCCAATGGGTTCTCAGACCCCTACGTCAAGATCTACCTGTTGCCTGATC GCAAAAAGAAGTTCCAGACCAAG ac079527.1 165404-165776 phase 0 - GTGCACAGGAAGACGTTGAACCCCATCTTCAACGAGACGTTTCAGTTCTCGGTGCCCCTGGCCGAGCTGG CACAGCGCAAGCTGCACTTCAGCGTCTATGACTTCGACCGCTTCTCGCGGCATGATCTCATTGGCCAGGT GGTTTTGGACAACCTGCTGGAGCTGGCTGAACAGCCCCCTGACCGCCCGCTCTGGAGGGACATCCTGGAG GGTGGCTCG ac079527.1 166354-166572 phase 0 - GAAAAGGCAGATCTCGGAGAGCTCAACTTCTCTCTCTGCTACCTCCCCACGGCTGGGCGCCTCACCGTGA CCATCATCAAAGCCTCTAACCTCAAAGCAATGGACCTCACTGGTTTCTCAG ac079527.1 168415-168535 phase +1 - ACCCCTATGTGAAGGCCTCTCTGATCAGCGAGGGGCGGCGTCTGAAGAAACGGAAGACCTCCATTAAGAA GAACACACTGAACCCCACGTACAACGAGGCCCTGGTGTTCGACGTGGCTCCCGAGAGCGTGGAGAACGTG GGTCTCAGCATCGCAGTGGTAGACTATGACTG ac079527.1 168644-168815 phase +2 - CATCGGCCACAATGAAGTGATCGGGGTGTGCCGCGTGGGTCCAGAGGCTGCCGACCCACACGGCAGAGAA CACTGGGCAGAGATGCTGGCTAACCCGCGCAAGCCTGTGGAACACTGGCACCAGCTAGTGGAG ac079527.1 168908-169040 phase 0 - GAGAAGACTCTGAGCAGCTTCACAAAGGGTGGCAAAGGATTGTCAGAGAAAGAGAATTCAGAGTGAGG *** ac079527.1 172106-172173 - GTCTGGTCAAGGCCTGGGGTTGGACCAGGCACCCTCAGGACCCATCCCTTCCTGCCCGGACTGTGAACTC ATCTCCTCGAAGCCATAATGTCCGAGCGGCTGGTGCGGGGCTGCCTGGACCTACCCCTCCTTCTCCTGGA GGTGTGAGGCTAGGAGGCAGCAGGCCCAGCTCCCTGTTTCAGGGTGGGAGGTCCTCGGCCTCCATTGTCT CTCTTCTTATCCCCAGAGTTCCCCCTAGAGGCAAGGGGCCATGCATGTCTGGGGACCCCTGCCCCCAGCC CTCTGTCTGTCTATCTGTCTGTCTCTTTGCTGTTGTCCAAGTCTTGCTGTTCTGGCCTGTGTCCTCACTG TGAATGTCGACAGACCAATCCTTGATGTCCCCTGAACAGACACACCCTCCAGTGTCCACCCCTTCTGTCC CTCCATCTGCGTCTGGCCAATCCCCCCTCTGCCGCTGCTATCATCACCAGAAATAAACACACTCTGTGAG TCTCATCCC ac079527.1 172556-173054 -------------------------------------------------------------------------------- 56. Mus syt4 Mmsyt4 Abundance high Chromosome 18 Size small (draft) Transcript complexity affecting the region between C2A and C2B Antisense overlapping gene MAPITTSRVEF^ DEIPTVVGIFSAFGLVFTVSLFAWICCQRRSAKSNKTPPYKFVHVLKGVDIYPENLSSKKKFGGDDKSEVK GKAALPNLSLHLDLEKRDLNGNFPKANPKAGSSSDLENVTPKLFTETEKEANSPESLKSSTSLTSEEKQEK LGTLFLSLEYNFEKKAFVVNIKEAQGLPAMDEQSMTSDPYIKMTILPEKKHRVKTRVLRKTLDPVFDETFT FYGIPYPHIQELSLHFTVLSFDRFSRDDVIGEVLIPLSGIELSDGKMLMTREIIKRNAK^ K]SSGRGELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLS^ DPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLG ATAEGSGGGHWKEICDFPRRQIAKWHMLCDG - TGAATCCTCAAGAGAGGAGGGAGGATGCCAGAAGGAGGGCGAGGAGGAGCGGCTGGAGAGAGGAGGGGGA GGGCAGGTGCTGATTTCAGCCCTGTAGCGTCAGGATTGCGTCAATTCGGGTTTCAGCCACGTCTGGAGTC TCAGAGACAAGCTTTTCAGAAGAGCCAACAGGAACAGGGCAGGGTGGCACATTGCTGATAGAGAGCGCGG ACCTTCCTCCAGCCCCTCCCGCTGCCGGTGCTGGTCCCCAATCCCCTGTGTTTCCCCTGGAAGCCTTGTT CCTGGATCCTTCCAGGTGAATCTGCCCGGAGTTCTTTCAGCACCTCGGACAGAGCACGCAGAAAACATGG *** CTCCTATCACCACCAGCCGCGTGGAATTCG ac102660.2 (181188-180809) phase +1 - ATGAAATTCCCACAGTGGTGGGCATCTTCAGTGCTTTTGGCCTCGTCTTCACTGTCTCTCTCTTTGCCTG GATCTGCTGTCAGAGAAGATCAGCCAAATCCAACAAGACTCCTCCATACAAGTTTGTGCACGTGCTTAAA GGAGTTGATATCTACCCAGAAAACCTAAGTAGCAAAAAGAAGTTTGGAGGAGATGACAAGAGTGAAGTGA AGGGTAAAGCCGCTCTGCCCAACCTTTCCCTGCATCTTGACCTAGAGAAGCGAGACCTCAATGGCAACTT CCCCAAAGCCAACCCCAAAGCTGGCAGCTCTTCTGATCTGGAAAATGTCACCCCAAAGCTCTTTACGGAG ACAGAAAAGGAGGCCAATTCCCCTGAGAGCTTGAAGTCCAGCACTTCCCTCACGTCAGAGGAGAAACAAG AGAAGCTGGGGACACTCTTCTTGTCTCTAGAGTACAACTTCGAGAAGAAAGCATTTGTGGTGAACATCAA GGAAGCCCAGGGCTTACCAGCCATGGACGAGCAATCCATGACCTCTGACCCGTACATCAAAATGACAATC TTACCAGAGAAGAAGCACAGAGTGAAGACCAGAGTGCTCAGGAAGACGCTGGACCCTGTTTTTGATGAAA CCTTCACATTCTATGGAATCCCTTATCCCCACATCCAAGAGCTCTCCTTGCACTTTACAGTTCTGAGTTT TGACAGGTTTTCTAGAGATGATGTCATTGGAGAAGTCCTGATTCCTCTTTCAGGGATTGAATTATCAGAT GGAAAAATGTTAATGACTAGAGAGATCATCAAGAGAAATGCTAAG ac102660.2 (177940-177126) phase 0 - second pickup rare AAG]TCTTCTGGCCGGGGTGAACTTCTGGTCTCTCTCTGTTATCAGTCCACTACAAACACGCTCACTGTGG TGGTCTTAAAAGCGCGGCACCTACCGAAATCTGATGTGTCTGGACTTTCAG ac102660.2 (175388-175268) phase +1 - ATCCCTACGTCAAAGTGAACCTGTACCATGCCAAGAAGAGAATCTCTAAAAAGAAGACTCACGTTAAGAA ATGCACTCCCAACGCAGTGTTCAATGAACTGTTTGTCTTTGATATTCCTTGTGAGAGTCTTGAAGAAATC AGTGTTGAATTCTTGGTTTTGGATTCTGAAAGGGGATCCCGAAATGAGGTGATTGGACGGTTGGTCCTGG GTGCCACAGCAGAAGGAAGCGGTGGGGGGCACTGGAAGGAGATCTGTGACTTCCCCAGGAGACAAATTGC TAAGTGGCACATGCTCTGTGATGGTTAGCTTCCTGGCCATGAGCTGCAACTTAAAGATTTTTACTAGGCA *** AGAAGCAATTTTCTTTCTTATACACGATTGTAAGCTTGCAGCACAGCAAGCTACTTTATTATTTATTTTT ATTTACTTATTTGTTTTGGTTAGAAGTGGATTAAGTTAATAGACCAGAAAATAGTTGTAAATGTGTATTA TGATAATTTCCTCTTTTATTAGAGGTGTTGGCCAAGTTTTCATAAGATATTCAGTTTCCCTCTGTGTGGT ATTAAGTGGGCCAACCCAGCCTGTTATGAGCACCCTAGCTTAACCTTGTCACAGATGTGTGTTGTAGGTG ATGGTTTCAGTTTTGCTTGGTAGTGGAAATCAGGTGATTGTTAGAGTTAAAAATGAGAACCACACCTTTT TGTATGAAAATTAATCCATGTTTCTTCAGGTTGGGGGAGATAGGTTTTATTTAAATCCAAAGATATTTCC AAAATGTCCTCAAGTCTGGTTTTTTTTTTTTTAGTTAAATACGTCATGTACAAATGATTGTCTTATATAT CAAAGTATGCTGTAATTTTCATGGTGATTATTTGATACAGTCTCATCATAAGAAGGGTAGCTTAGGTTCA TTTCATAAATACAGCAAACAAGTTGAGAAATTAATTTATAAAAGGGCTGAATTGAAGAACACTGTGGTTG ATATGAGATTTTTTTTTGTTCCATCACATGTGAGTCATGTAAAATTTAACTTCACCTAAGAACCATGGTC TTGAATTATTCACTGCCTGTCAGAAGCCTCAGTGTGGCCTAAGATACTCCTATTTACCATTGTGAAGTTG TCAGACTAGTGAAAAAAAATAAACCTAAGCTAGCAATTCAGTTAGGAATACATTTTTTTAAATATAAAAA TCTATCAGTGTACAAGTGTATTTTCAAGATTGTCTTTCCCCCTCAGAGTAGACATGGCTACTTAAGTTTT TAACTTACTCTTACCGAGAAAGAACTAAGCGACTTAAAAAGAAAGAAAAGAAAAGAAAAAAAAAACTTGT GGAATTCATTGTCAAGTTGAAGTCAACCACATTAAGTAAAAGACTAAGACAAGAAAAGAGTAAGCCTTTC AGAATTTACAAATATTCACAAAATACAGTTAAGCTGTAAAAATAGCAGAGACAGTGTGTTCTTCGCTGTC TTTAGACGCCAGTTTGTTTTGAGCTGTTATTTTTAAGATAGCTTAAATTATCGTGTCTTGTGCCACTCCC AATTGCTAAGTTCTGAAATTCTTGCAAAACCTGTGTGAGGCGAGCAGAGCTCTGGCATTTCCTGGGAAGA CTTAATTCAATGGCAATGTCTTTATATTTGAGTCATCAGAGACTCATGAGTATGACTTAGGTCCAGCCGA ATTATTAAATATGCAAGTTAGAGATAATGTCTACTGGAAATTTTACCTTTGAGTCAAGTTTTGTGTCAGT GCTTTAGCATTTTTGAGAATGTGTTTGATATCACAGTGTTTGTAAATTCGATGAAAATGTATTTCTGAAC CACTTGTCTGTGCTTTTTATGACTACGACAAAACTCTGACTTTCTATAAGGAGATATATTTCATTCTGTT TGTACAAAAATTTTATGCCTTCCCCTCACTCATCGCCATCCAGTGACAACGTCATCTGACATCTCTGCCT ACTCAGCAGTCTGAGAATAACATGGAGTGAGCTGCGGTCATGTGGAGTTGGGGAGGCCAGGCGGCCTCTG CATGTATGTACATTTGATGTCATAGGCCATGGAACCTGTGGAGCTTGGAGCTTTAATGTCAAGAGACTTC ATTTCCAAGTATCCCACAGAATGGCAGGAAGCTGATGGTGACCCAGGTTATAGGATGTTTGGTGGAAAAA AAATTTTTTTTTTTAAAATAGAAAATAAATCTGACAACAAATACTTTAAAAATTGTAAATAGTTTTTAGT TTTACGACTTAAAGTGTTTTGATGGGGAAAGTTGATTGAAACTATAACTGGTTTTAAGGGAAAAAAAAGA GAGAAACACAAGAAAGGAGAAAAGCAAGGAAAAAAATTGAAACAGGCAGGGAGATATGCAATCTCATTAT TTCTGAAAAATTGTACTGTTTATAATGTATTACAATCTTAACGTGAATATCCAATTCTGCTAAAATTCCT GCACTGTATTCAACATGTACATTATTATTTTTTGTGTGCTTAGCCAGTCTAACCCCCCAAATCGGGAGGT TACCATGTCCGAGGAACTGTGTGATTCAGTAACTGACCCGTTCTGACTTGTTGTAGTTCAGTAGTGATCC GGAGGGAAGCATGGTGTTAGGGAGATGCTGTCTGTTCCTTTGTGCCAGCACTGTGTGTTTGTAAGACATG AATAAACTGCTGCTTTTGCCC ac102660.2 (174165-171485) Antisense gene - GTCTGTGCAGCTTTTATTTCAACAGGAAAGTAATAAAATCTATATACAGTCTAAAACCAGTAGAAAAGGT GAGTAAAAAGGACCCCTGGGTCATCTGGGTCCTGCCAGGAGCGGCGGTGCGGGCCTTTACTCCCAGCACT TGGGAGGTGGAGGCAGGCAGATCTGTGAGTTGGAGGTCAGCCTGGTTGACATAGCGAGTTCCAGGCCAGC CAGAGCTACATAGTGAGACCCTGTCTCAGAACAAGAGTCTATGGAGTGATATGAACGGTGGGGCTGGGCA AGCATCAGACCTGGTGCCCAGAGGAGGGCCTGGGTGTTTCTCTGGTACAAGTAACAGCGGGGCCTTTGGA AAGATCCCTCGCCAAGTATAGGCAGAGAGGACACTGCCTAGCTGAGCCTGTCTACCTGTCTCCACAGACA GGCAGACATTCCAATGGAGGTCCAGCCTGACTTACAGACCCAGAGGGAGCCAAGCCTGGCCTGGATTCTG TTAGCATGTCCAGAC ac132367.3 (135631-135127) chromosome 17 ac114659.5 (14019-13515) - CTTCACGGTGCTATCCACAGCCCCTGAGAAGAGCCGGCCCCGGGAAACAGCCAGTGCAGTTACACTGCCCT GATGGCGCAGCAGAGTCTGTGTGCAGATCATGTTGTCCATACTCCAGAC ac132367.3 (134953-134834) chromosome 17 ac114659.5 (13341-13222) - CCTGAGGGACCGGTCATAGGATGCACTGAAGACTTTGGTCTGGTCTGGTGTTGAAATGACTGCCAGGGCAT ACACTGTGCCCACGTGACCTGTGAGGGTCCGAACCTGCTCTTTGGATTCAATGTCCCACAC ac132367.3 (134749-134618) chromosome 17 ac114659.5 (13137-13006) - ATGAATGAGGTTCTCATAGGTGCCACAGACAATGTGGTGATTCGTCACAGCAATGGAATACACACTGCCAC CAGATGTCTGCAGGACATGGATGCAGTCAAGGGTCCGAATGTCCCAGATCTAGGGAAAAGTGTGTCACTCT CAGGCCAGGCACGTGCTTACCTTGGGCCTCAGGACCCAGCAGCCAGCCTCAGAGCATGTTGGAGGGTAGGG AAAGGGCAGAAGAAGCTCTAGGTCACCCTAGGAAGAACAGTAGAGGGCAAGTCCCTGCCACCAGGGGTAGC TTGGCACACCTTGATTGTCTGGTAAGAGCCACTGTACAGATAGCTCTGTGCTGCCACCAGGGCCCGCACCC AGTGGTTGAGGCCTGTGAGTTCTTTCTTCAACTTTAGCTCAGTGCCCACGATGTCCCAAACCTGTAGGGAT GGCCATGAGCCTGGGCTAGGAAGGCATCCATTGCTGCAGTAGCCCCCACGTGCACGCATACTCCTTGTCTA TACCTTGATGGCTTTCAGGGAGCCACTGAAGAGCATGTTGTGGGAAGACACCAGTGTGCATACAGGGTTGT CGTGGGCCCGGATAGTATTCACCTTCTGTAGGTTCTGGATGTCCCACACCTGTAGGGGGTGAGAGGACTTA GAGTTAGGAAGGAAAGAGCAATGGGTCTTCTCGGCCCCCAACTCCTCACCCTGTGCCCACTCACAATGATG GTGCAGTCTGCAGACCCACTGTACAGTTTGCACCTATGGAGGCAAAGTCAACACGGGGAAGCAAAGTCAAC AGGATGCAGAAGAAGCCACTGTGCCCTGGCTTAGCCCCAGGACACAACGTGGCGTGGTCTCAGGGCTACTG CTGCTCCCTCGGTGCCATTCTCTGTGTGCATAGTTGGATGTGAACAACTAGACTGGGAATCATTTGACGGC TGAGCTGAGCAAGCGGGAAGGTCACCTATTCTGAATACCGAGGCCCAGGGAGGTTACCACC ac132367.3 (134529-133546) chromosome 17 ac114659.5 (12917-11934) - GATTAATAGCATTTATTTTCAGTTTGCTTTTAAAGCAAGCAATGAAATAGCTACAATGGCATCAACTCTGG GCAATCGGTCCTCTTACTTCATTAGCTCTTTTGAAATAAGGGAGGGCAGAATGGGCTGAGCTTTGGAGAAA TACTGTTTAAGAAGCTAGACAGGTTTGATACACCATTTTACCATATGAAGCTATAGTTAATGAGGTACTAA TTTTAATGTAACATACACAGAATATATTTATGTTTATGACAAATGAGCTTAACCATATGTTACAACAACTT AGATGGGAAACATATACTTTAATATAATTTACATTGTATGATCAGATTACTGCGAAATGCATCACAAGTGA ATTCTACTTTCATGAAACAGAACACTTTAACTGGTGCATGCAGAGGGCTGAGAAGGCAGGTACTATGTATG TTTGGGTTGCTTAGAACATTAGCACAGTCACTACCATGGGAACACGGCACACAGTGACTTAGTTTCTGTGT TTTCATAGCATGAATATGTAAGGTTTAAAAAATGTCTATTCAAAGAACACTTCAGTGCCAAGTGTGTGGGA GCTGGTAGAAAGGAAAGAAACGAGGCTTTGACTTAGAAAATTTTCCATGATGCAGAGGGCTGAAACCAGTG TATCCCCAGACACACTGCTGGCACTTGGGGAAGCTGTTTGCCAGTGTGCAGACACCTGTCTCGTGTACAGT AGTTTTCTGAAACAACCTCATGGCTCAGCTTCCTTCATGACAGTACATATTGCATTTCATTTGTTAATTGA ATTCCAGAGCAAAGGTGTGTGTGTGTGTAACATTAAATGATAGGTGAAAATTACAGCTATGTTTCTTCTTT ATAAATCTGCTAAGTGTTTGTTTTTTAAAAGTGATAACCTTAAGATTCAAATTAATCAAAATTTGACACCA TATTTTTTCAGATCCTCATTCCAGAATAACAGTCCTTTGAAAGTAACTGGTAATAATATTATTTCAGAATT TGGTCCAATTCTTGTTATTTGTTTGCAGAAACCTATTAGAGGTCAGAACATTTGACTATAAATGTTACTAT ac102660.2 (182774-181710) - ATCAGCAGTATCCAAATATTAAAAGTCATATCTGAGAATTAATTTAAAAAGAATTAATTCCATCTATTCCC AAGAATCTTAACTGGTCAAATGTCAAGTATTAAAAGGAAAATAGCTGACAGACAAGAAACCAGCAACACTA TCAACCTAATGTTCAGACTATAAATTGGTAGTAAGAACATGATTATTTTTAATGTAACAATTTACAGTGGA TTTCCTCCAAATAAGTATGGCATGCATGCAATAGTTCACAGAATAATTTAAGAAGCAAGGATGCATATTAC AGTGGGTCATTTGATATGGAGACTTCCCTCTCTTTACTCTGTATTCCTCTTATAAATTATGATAGTCTGAT AAGTAGGACTCATTTATTTTAATGTCTGTATATCATCAGGAGAATTTTGGATTAAGAATTGCCAAGGATAC GTTTCAGGACGCGTCTCCGTGTGCCTCCGAGTCTAACAGAATAGCACAGTTCAAATCTAGTAGCCCAACAG TTAAAATAATTGGTGAGTGTGCGCTGAATCCTCAAGAGAGGAGGGAGGATGCCAGAAGGAGGGCGAGGAGG AGCGGCTGGAGAGAGGAGGGGGAGGGCAGGTGCTGATTTCAGCCCTGTAGCGTCAGGATTGCGTCAATTCG GGTTTCAGCCACGTCTGGAGTCTCAGAGACAAGCTTTTCAGAAGAGCCAACAGGAACAGGGCAGGGTGGCA CATTGCTGATAGAGAGCGCGGACCTTCCTCCAGCCCCTCCCGCTGCCGGTGCTGGTCCCCAATCCCCTGTG TTTCCCCTGGAAGCCTTGTTCCTGGATCCTTCCAGGTGAATCTGCCCGGAGTTCTTTCAGCACCTCGGACA GAGCACGCAGAAAACATGGCTCCTATCACCACCAGCCGCGTGGAATTCG ac102660.2 (181709-180809) - GTGAGCAAGTTGCTGAACTTGG GGCTGTGGCTGGGCTCAGGGGCTGTGCTGTGCTTTGCTCTCTACTGGGTCTTGAATATGTATATTTTCAAG TAGCTAATTTGAAAGGAAGACGAGAACAGCAGATGGTTAATTGTAGCTTACTTCCTTCCCTTGATATTTTT CTCCTTAACATTGCCTTGTGATTTCACCTTCCAGAAGTTCCCGAATGTTCACGCGGCTCTGTAAGCTGCAG CCTGAG ac102660.2 (180808-180568) - CAGAGAAGAAGCACAGAGTGAAGACCAGAGTGCTCAGGAAGACGCTGGACCCTGTTTTTGATGAAACCTTC ACATTCTATGGAATCCCTTATCCCCACATCCAAGAGCTCTCCTTGCACTTTACAGTTCTGAGTTTTGACAG GTTTTCTAGAGATGATGTCATTGGAGAAGTCCTGATTCCT ac102660.2 (177376-177195) - GTTAAGAAATGCACTCCCAACGCAGTGTTCAATGAACTGTTTGTCTTTGATATTCCTTGTGAGAGTCTTGA AGAAATCAGTGTTGAATTCTTGGTTTTGGATTCTGAAAGGG ac102660.2 (174103-173992) -------------------------------------------------------------------------------- 57. Mus syt5 (syt9) Mmsyt5 Abundance high Chromosome 7 Size small (draft) Transcript complexity affecting 5'UTS MFPEPPTLGSPAPKTPPDSSRIRQGA^ VPAWVLATIVLGSGLLVFSSCFCLYRKRCRRRMGKKSQAQAQVHLQEVKELGRSYIDK^ VQPEIEELDRSPSMPGQQVSDKHQLGRLQYSLDYDFQTGQ^ LLVGILQAQGLAALDLGGSSDPYVSVYLLPDKRRRHETKVHRQTLNPHFGETFAFK^ VPYVELGGRVLVMAVYDFDRFSRNDAIGEVRVPMSSVNLGRPVQAWRELQVAPKEE^ QEKLGDICFSLRYVPTAGKLTVIVLEAKNLKKMDVGGLS^ DPYVKVHLLQGGKKVRKKKTTIKKNTLNPYYNEAFSFEVPCDQVQ^ KVQVELTVLDYDKLGKNEAIGRVAVGAAVGGAGLRHWADMLANPRRPIAQWHSLRPPDRARPIPAP - start1 TTCTCCGGGGCAGAACACGCACGCACACATATGCACAAATACACGCGCGCGCGCGCGCGCGATCTCACAC AGGGGCGCAGACATTAGCCTGGCTAGGCTCAGCCGCGCCCCCACCCTGCCAAACTGTGTGATCAGCACAC AAGGGAAAGCGCCATCCACCCACGTGCTGGGGGCGGGGTCCCAGCAGCCCACAACACCTCCAGAAGGGTC CTGTCGAGACACCTAGCAG ac079521.1 60346-60574 - start 2 AGAGAATGGATTGGGAAGAGAATGGGATGGGGTGGCATACAGAGGAAGTATCCCTTTGTGATGGAATTGG GTCCCCCAAAGCCTGCCACTGGCGTGAAGAGGCTGAGATTAACTCCTAGTGTGCACCAAAAATCAATGGA ATTTAAGGTTCTTTGATGCGTGAGAAAACTCACTGGATGCTTGGGTAGGAGTGGGGTGGGGTGGGGATAG AGTATTTGGGTACCTCTGCAG]GAAGCACCGCAGGACCCCGACGCCATGTTCCCGGAACCCCCGACCCTG *** GGGTCTCCAGCGCCTAAGACACCTCCAGACTCCAGCCGCATCAGGCAGGGCGCAG ac079521.1 61319/61550-61652 phase +1 - TGCCTGCCTGGGTCCTGGCTACCATCGTGCTGGGCTCGGGCCTCCTGGTCTTCAGCAGTTGTTTCTGTCT CTACCGGAAGCGCTGTCGGAGACGGATGGGCAAAAAGAGTCAGGCCCAAGCCCAAGTCCATCTTCAGGAA GTGAAGGAGCTGGGCCGGAGTTACATAGATAAG ac079521.1 62133-62305 phase 0 - GTTCAGCCTGAAATAGAGGAGCTGGACCGGTCACCATCCATGCCTGGACAGCAGGTATCAGACAAACACC AGCTAGGCCGACTGCAGTATTCACTGGACTATGACTTCCAGACTGGCCAG ac079521.1 64748-64867 phase 0 - CTCCTGGTGGGCATCTTGCAAGCTCAGGGACTGGCTGCGTTGGACCTAGGAGGTTCCTCAGATCCCTATG TTAGTGTCTATCTGCTGCCAGACAAGCGGAGGCGACATGAGACCAAGGTGCATCGGCAGACCCTGAATCC ACACTTTGGAGAGACATTTGCCTTCAAG ac079521.1 64995-65162 phase 0 - GTCCCATACGTGGAACTAGGGGGCAGAGTGCTGGTCATGGCGGTGTATGACTTTGATCGGTTCTCCCGCA ACGATGCCATCGGGGAGGTGCGGGTGCCTATGAGTTCAGTGAACCTGGGGCGGCCGGTGCAGGCCTGGAG AGAGCTGCAGGTGGCTCCCAAAGAGGAG ac079521.1 65527-65694 phase 0 - CAAGAGAAACTGGGGGACATCTGCTTCTCTCTCCGTTATGTCCCCACGGCCGGGAAGCTCACCGTCATTG TCTTGGAAGCTAAAAACCTGAAGAAAATGGATGTAGGAGGACTCTCAG ac079521.1 65941-66058 phase +1 - ATCCCTATGTGAAGGTGCACCTGCTCCAGGGAGGTAAAAAGGTTCGCAAGAAGAAAACCACCATTAAGAA GAACACCCTGAACCCCTATTACAACGAGGCCTTCAGCTTTGAGGTGCCCTGTGACCAGGTGCAG ac079521.1 66672-66805 phase 0 - AAAGTCCAGGTGGAGCTGACTGTTCTGGATTATGACAAACTGGGGAAGAATGAGGCCATCGGGAGAGTGG CGGTGGGCGCAGCAGTCGGTGGGGCTGGCCTGCGGCACTGGGCTGACATGTTGGCCAACCCCAGGCGCCC CATTGCCCAGTGGCACTCTCTGCGGCCCCCTGACAGAGCCAGGCCAATACCAGCACCCTGATTTCCATCA *** AGCAAGCACCTGACCCCAGATCCCTTGCTCCTAGACCCTTATCCCTCTCCCTGCTCCCCAAACATTGCAT TCATTCCTACTTCCACATTGGAAATGTTTCCAAGTTCCATCCAATACCACTCCTATACCCAGAAACCACA GTGAGCCTGCGGGGAGGTGGGAGAGCCGGGAAAGTCTGGTATCCCCTGCCCCAGGGTCCTACCCTCTGCT TTGACAATCAGCTGTGAAGCCTCTGATTTCCTTTTTCCCAGTCTCTTACCTCTTCCCACACAGCTTGACT CCTATGCTGCTCTTGGGGCCAAATAAAATACTCAATAGCTTAG ac079521.1 67587-68119 -------------------------------------------------------------------------------- 58. Mus syt6 Mmsyt6 Abundance moderate Chromosome 3 Size >60 Kb Transcript complexity affecting Nterm, Cterm and 3'end MSGVWGAGGPRCQAALAVLASLCRARPPPLGLDVETCRSFELQSPEQSPSAADS[GTGRPRSLSTPGFLFSVASPAQ^ if 2nd pickup, then join to this: AVLDALEEERGLQPFFC alt.Cterm GTSVSLLAVVVIVCGVALVAVFLFLFWK]LCWMPWRKKEASSPSSANPASETLQSPSSRGNMADKLKDPSALG - alt. Nterm FLEAAVKISHTSPDIPAEVQMSVKEHIMRHTKLQRQTTEPASST^ RHTSFKRHLPRQMHVSSVDYGNELPPAAAEQPTSIGRIKPELYKQKSVDGDDAKSEAAKSCGKINFSLRYDYE SETLIVRILKAFDLPAKDFCGSSDPYVKIYLLPDRKCKLQTRVHRKTLNPTFDENFHFPVPYEELADRKLHLS VFDFDRFSRHDMIGEVILDNLFEASDLSRETSIWKDIQYATS^ ESVDLGEIMFSLCYLPTAGRLTLTVIKCRNLKAMDITGYS^ DPYVKVSLLCDGRRLKKKKTTIKKNTLNPIYNEAIIFDIPPENMDQVSLLISVMDYD^ RVGHNEIIGVCRVGINAEGLGRDHWNEMLAYPRKPIAHWHSLVEVKKSFKE[VGEVAWPLACLLHGGVG alt.Cterm ^GTPRL alt.Cterm ^WQGRAASFDSESSCPSPKPPPTP alt.Cterm - start 1 GCTGCGGGGAGGGTCTTCTTGGGGCCTTCTTACCCCGCCCCAGTCCGGCCGCGGCTGGAGTTCGAGCCAC TACTCCGCTGGCCTGAGTGTCCGGGGCATGAGCGGGGTTTGGGGGGCCGGAGGGCCTCGGTGCCAGGCGG *** CGCTCGCGGTCCTGGCTTCTCTGTGCCGGGCCCGGCCGCCCCCTCTCGGGCTGGACGTTGAGACTTGTCG GAGCTTCGAGCTGCAGTCCCCGGAGCAGAGTCCAAGCGCGGCAGACTCAG[GTACTGGGAGACCCAGGTCC CTCTCCACTCCTGGATTTCTCTTCTCAGTGGCCTCCCCTGCCCAAG ac123057.4 (110341-110082/110016) phase +1 - start 2 GTCTCTCTCTGACTCACTCGGACTCCGGGCGGGTGTTCAACTGAGCCGGTGCCTCTCACCGACTTTGCCA GGCGGGAACCTCCTGCCCCGGCCCCGCGGACCCTGCGCCGGACGCAACCCCGGCAGCCGCCAAGTCTAGG CGGCAGCCCGAGCCGAGTCCAGCTCCTGAGCCCGGGTGAGTCCTGAGCCCGAGCCCCTCGGGGACCCGGT CCTGCGTGCAGCCGCGACGTCTCGCGGGAGTCGCGACAAGAGGGGTGGCGTGTCGCGCCCTGGCGGCGGG AGCCGCGGGAGTGTCCGCGGCGTGACAGCCGACCGGCCCGG ac123057.4 (109495-109175) - GCACCTCTGTCAGCCTCCTCGCCGTGGTAGTTATTGTGTGTGGCGTGGCCCTGGTGGCAGTTTTTCTCTT TCTCTTTTGGAAG]CTGTGCTGGATGCCCTGGAGGAAGAAAGAGGCCTCCAGCCCTTCTTCTGCTAACCCT *** GCTTCAGAGACTCTCCAGAGCCCCAGCTCCAGAGGCAACATGGCGGATAAGCTGAAGGACCCCAGTGCCC TGGGCTTCCTGGAGGCAGCTGTGAAGATCAGCCACACTTCCCCAGACATCCCAGCCGAGGTGCAGATGTC GGTCAAAGAGCACATCATGCGCCACACAAAGCTGCAGCGACAGACCACAGAGCCAGCATCCTCCACCAG ac123057.4 (100280/100197-99932) phase +2 - GCACACATCCTTCAAGCGCCACCTGCCACGACAGATGCATGTCTCCAGCGTGGACTATGGCAATGAGCTG CCGCCGGCTGCCGCCGAGCAGCCCACCAGTATTGGCCGTATCAAGCCTGAGCTTTACAAGCAGAAGTCAG TGGATGGGGATGATGCCAAGTCGGAGGCCGCCAAGAGCTGTGGGAAGATCAACTTCAGCCTCCGCTATGA CTATGAAAGCGAGACGCTGATTGTGCGCATCCTGAAGGCCTTTGACCTCCCTGCCAAGGACTTTTGCGGA AGTTCTGACCCTTATGTTAAGATCTACCTCCTGCCTGACCGCAAGTGCAAGCTGCAGACCCGGGTGCACC GCAAGACCCTGAACCCCACCTTTGATGAGAACTTCCACTTCCCCGTGCCCTACGAGGAGCTGGCTGACCG CAAGCTGCATCTCAGTGTCTTTGACTTTGACCGCTTCTCCCGCCATGACATGATTGGGGAGGTCATCCTG GACAATCTCTTTGAGGCCTCTGACCTGTCCCGGGAGACCTCCATCTGGAAGGACATCCAGTACGCTACTA GT ac123057.4 (98389-97828) phase 0 - GAAAGTGTGGACTTGGGAGAGATCATGTTCTCCCTCTGCTACCTGCCCACAGCAGGCAGGCTCACCCTCA CAGTGATCAAGTGTCGAAATCTCAAAGCAATGGACATCACAGGCTACTCAG ac123057.4 (64836-64716) phase +1 - ATCCCTACGTCAAAGTATCCCTACTGTGTGATGGACGGAGGCTGAAAAAGAAGAAAACGACCATAAAAAA GAACACCCTAAACCCCATCTACAACGAGGCCATCATCTTTGACATCCCCCCAGAAAACATGGACCAAGTG AGCCTGCTCATCTCCGTTATGGACTATGATAG ac123057.4 (60125-59954) phase +2 - AGTTGGCCACAACGAGATCATAGGAGTCTGTAGAGTGGGGATCAATGCTGAAGGCCTTGGCAGGGACCAC TGGAATGAGATGTTGGCGTACCCACGAAAGCCCATTGCGCACTGGCACTCCTTGGTGGAGGTAAAGAAAT CCTTCAAAGAG ac123057.4 (58640-58490) phase 0 - end 1 GTGGGTGAGGTTGCCTGGCCATTGGCATGTTTACTGCATGGTGGCGTGGGCTGAAGAATGGCAGGCGGCT *** GCTCTTAGTCCTTGGCCTCTTATGGAAAGGGGGCATGGGGAACCTCTAGTGTATAACATGGTATACAAGT ATATGCAATGAGGAAGGAGATGGATGCTGCCTGGCAAAAAGTTCCTGACTGTGAGCATTTTATAAGTCAT GGTGATGGGGCTAGGGATGTTGTAGTTCATTTGGTAGACTCCTGACCTAGCATGCATGAAATCCTGAGTC CAGTCCCCAGTACTGCCTAATGTTAGGTGTGGCAGCACACACTATAACCCCAGTGCTTGGCAGGAGGATT CAAAGCTTAAGGTCATTTTCAGCTTTTAGCAGGTTTGAGGTCAATGTGGGCTACACAGAATCTAGTCCCA AAACAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG ac123057.4 (58489-58028) - end 2 GGGACCCCTCGGTTGTGATTTCATTCA *** ac123057.4 (54720-54694) - end 3 TGGCAGGGCCGAGCTGCCAGCTTCGACAGTGAGAGCTCATGCCCGTCTCCGAAACCACCTCCGACGCCA TGAGCTGCACAGCGGAGCCGATGGGACTCAGCAATGTTATTTCCACACTTGTTCCAGTCTCTAAACACAGT *** GTTCGTGCAGTCACAGTGATGGCCGCAGCAGCAGCCACTGCCTGCCAGCCCGTGGTCTTAACTGCTCTTG TGCAGGGCAAGGCCCAGACACTTGTCCTGTGTGATCAGATCTGTCTTAGTCTTTTCTGTCTCCCAAGGTG ACGCTTTTTGTGGTTTTTCACTTTGTTTGGGTCTGCTGTCGAGAAAGAAATAAAAACACAATAATTAGAG ATACAAAATGAAGAATGGAGAGCCCAGAAGCTGGTTCTGGGAAATACAATGTAAGATAGCAGTCTTTGGG GGGAAAGCAGACTGAATCTCTGAAATTTTGTGCCTCCATCAAATGTTGACCCCTGGAGATGCACCAGAAA GATGGAGCCATGGCTGTATTTTCAGTGCCCTCCAAGAACGGACCCTATCAACTTAGGAGCCTCTCCAAGG CAAATTATTCTTCATGGAAGCTCTTCACTGCTGTGACACAAGACAAGATGTGGTCTTCTTGTCCCGTGTT GAAATCATGAGGCCTCTGATATGTTTGTGACTCTGAAGGAGTACCCCTGTTCCCCTCTTTGTTGGCTTTC CCCAACTGGAAACATTTTGACTCCACGTGGGAACTTAGTCGCTTTCCTTAGGAATGATCCTGCTGAAAGT AACCACGCCATATGTTTCCCAACACTCCACAGTTAATGATCACATTTGTTTGACAACGGGATCTTAATTC TCAAAAATAACCTTCATTGTAAAGAAAGGAGGTACATATGTTCCAGAAGGATTCCTGTGTTATACATAGC TTTATAATTCCATGACGTAGTAAGCAGCTGTTTAAAATGCCTAAACAGAGCAAAGAAAAATCTAGGTAAC ACGTTCTTTTCTGAATGGGTCATTTTGAAATCCGAACCACATTTTTGAGTCTGCCTGTCTATGAAGAGCC TTCTCTTAGTTGAAACCCAGTTAGCCAGAGACTAGCTCAGCCCCACGGACTCTGGGACAATAACTCACCT TAAACTTTAGTTCTATAAATTAATAAGTATTCTGTGTTGTTTGTTTTAGTCGTAGTGAGAAGATCTTTGC TTGTTTGTTTGTTTTTCCATTAGATCTCTATCTTAGGCCAAATTCAGTTTAGAAAACAAAAATGAATGAC TGTATTTATAATAGCACATCTCTACAGTGTGACCAGTGAGTGGCCTTTCCACCACACCCTGTAAGCACAT GAAAGTGAGTTTCCACTCCAACTCGTGGCTACTGTAGGACTTGCATGAAGCAAGTCAGCTTGGAAAATTC CTTCTTTCAACAACAGAAGGTCAAGAACACAAAAGCTATCTGCATACCTCGTGTCTTACTCTTTACATAT GCCCCATGCTATAGGAGTAGCTACTTAATAAAGTCACCACCATTTTAAGTCAAGCCACCAAGTTTCTCTG CTGCCCTAACTTACATAAGTGTCTGCTAGTCAGAAGAATGACTGGATTGGACATGAGCCAACAGGATATT GTGGCAAGAGAAGCGATCCACTTTTCTAGTAAATGTAGATTAATTTAGATTCCACTGAGTATGAGCCTTG TGCTAGCGACTGGTGGGTAAAGATGATTTTTCTCTTCAAATATCTTACAATTGATAAGTCTTTATAACCA GGCAGTGCCCTGTTTGGACGTTCACTTGAGAGAGAGAAAAATCACAAGGTCGTGACAAGAGTCTCAGCAA GCAAGTAACTTCATTGTGTTTCTTGACTCTAGATGGGCCCCACTAAGGTGACTGTCACAGCACATAGCAG TGTAACTAGGAAAGGACCAATTGAGTTTTCTGGGTCAGAAGGAGTCCAGACATTAGTGAGTATGTCATCT TCCCAGAAGTGGGCTCCAAAAGCATGCCCAGCTGCCACCCCGAAACCCTTAGGCAGGTGGGATGTTCCAT TCTAAGATTTCAGATAGAAGGGTGTGGTCTGCCTAAATTATGGGATAGCAGCTGCCTGTCTGAGACAGCT TCTATATCCCAGCTACTCTTTTCCATAAGTGAACATTTTCTGGAAATGTTTCTGAAAACAGCACCTGGTT CTGGCCACACCCCTCTCACCACCCAAGTCAACTGCTTTAGCACCACCAGCCTCGGTGGACATTAGGCATG GAAACCCACTCCAGAAAGGCTCCTAGCTCCTGGGTTCCCTCCCCCAAGTCCCCACCAAAGGTGGCCAGAC CAGTCCTCTTCACTCTGAAGCATGAATGGTATAAATAGGCTTCACCATTTATTAACCAGGACTCTTCCCT CACAGAGGAGACATAATGACAATAAATGCAGAAGAAACTGAAATTCAAAATTGACTCTTCTGTTGGCTTC CCCTGGTACAGGAAACCCTTATGGGTGGCAAGCTTTGCTGAAGTTATGAAAACCAGGGCCATTTGCACAC AGAGGTTTGCTAAAGCCACCAAGTTCTCCTCTCCTTTATTTAGAAGTGTTTCTTGGCTGAGAGATGCTTC CCCCCCCCCCTTGCACTTACCCAGGATGTTAATTAATTGTATCATCATTTTAAAAAATTATGTTGTTAAT TACTGCTTTGTGTCTTCCCACCCCTGTCACAGCCTGGAGTTTCTATTCAATTAAATCTCTGTCTCTTGCC CAT ac123057.4 (53175-50443) -------------------------------------------------------------------------------- 59. Mus syt7 Mmsyt7 Abundance moderate Chromosome 19 Size >62.5 Kb Transcript complexity affecting Nterm and possibly Cterm MYRDPEAASP^ GAPTRDVLLVSAIITVSLSVTIVLCGLCHWCQRKL^ GKRYKNSLETVGTPDSGRGRGEKKAI^ [NDLDRDFWNNNESTVQQKWSSYPPKEFILNISPYAPYGDPRLSL(K-end)^] [NGTLLSGAKVATAAAGLAVEREGRLGEKPAPVPPPGEDALRSGGAAPSEPGSSGKAGRGRWRMVQSHLAAGKLNLS^] - alt.Nterm alt.Nterm, MTGSYRALGTCLHHAAATVPAAHSDRQRGRPRQRYWGTSELGPEVGGRSQPGNLRVGEVVAATAAVTTPMEAWRGPA ERALHWGLPALALGFFLFHCDPFTCFSFLSSPPPAP^(S) [NFEDSTLSTATTLESIPSSAGEPKCQRPRTLMRQQSLQQPLSQNQQGRQPSQPTTSQSLGQLQAHAASAPGSNPRAY - alt.Nterm GRGQARQGTSAGSKYRAAGGRSRSNPGSWDHVVGQIRNRGLDMKSF^] [(K/L)EGRMVVLSLVLGLSEQDDFANIPDLQNPGTQQNQNAQGDK^] - alt.Nterm (R/L/K)LPAGGKAVNTAPVPGQTPHDESDRRTETRSSVSDLVNSLTSEMLM^ - alt.Nterm LSPGSEEDEAHEGCSRENLGRIQFSVGYNFQESTLTVKVMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVK RKNLNPHWNETFLFE^ GFPYEKVVQRVLYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPCSDGS^ GSRGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTS^ DPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIIT[VMDKDKLSRNDVIGK ^IYLSWKSGPGEVKHWKDMIARPRQPVAQWHQLKA alt.Cterm ^GRDKGKQPQKKKKKKKSQGDSQLSWGPQGWELVALFVLCLSP earlier pickup alt.Cterm - start 1 GCTCTCTCTCTCACACACACATACACACACACATACACACACACTCACTCACTCACACACGCACGCACAC ACATACATACACACATACACACACACACACACATCGCCTCGTACACACTCACACACGCTCCGGCGCGCAC ACGCGGCGCGCAGGCCAGAGGGAGGAGGCTCCGCGCGGCTCGGCGGCGGCGGCAGCGTGCTCCGCGGGCG GCCCGGAGGGCTGGCGGGCGGCCCCCGCTCCCCGGCTCCGCGGCTCGGTGCAGCCCGCGCGGCCCCCGCC CTCGGACCCGCCCCCGGGGGTCGCCCGGCCCCATGCCCTGCAGCGGCGGCAGAGAAGCGCGCGGCCGCAG GCGGCTCTGAGGAGCCCGGAGGGAGCCGGCGACGAAGGGGACCATGTACCGGGACCCGGAGGCGGCCAGC CCAG *** ac124169.3 (115372-114949) phase +1 - rare read through to below two regions GTAAGCGCGGCCCCGCGAGGGCTGGGGCACCCCGCACGGGCTGGGGCGCCCCGCACCGGCGGGTAGGACG GCTGCAGCGCCTGGGCGCCGTCTCGGAGCCCCAGCCTGGGGCTGCTGTCGGCTGGAGCCGCACGAATTGC ACC ac124169.3 (114948-114806) - TGTAGACAGGTCTCCTTCAGCTCCTGTCCAGGCTCAGTTCCAGCTCCCACCTGGGATACTTCTCTAAACC CAGCAGGACCCCCCTACCCCCACTCCTGCTAGTTCACGCCTCCTGCCCTCCGGGGTCTGTTTCTGGGCTG CTCTCCAAGGCTAAAAGCTCCAGCCTAAGACCTACTCCTACAAGAGTCTCTGGGTTTCCCCTACAAGGGT CTCTGGGGGAGGCAGGTGCTGTGAAGAAGGCCAAGTCGAAACCCTCCACAGTAGGGGACTCAAGTCCTTG AAGCTCTGCACAGGAAGCTTTCGGACACTGGCTTTGCCCATTTATGCCCAATCCACACTTGCTGTCTTCT TCCCAGGGGCAGTCCAAGTCCACTGAGGTTGACCTCCTGGGGGCCAGACACTGTATTCAGTCAGCACTGG GCTCTGAGACTCAGTCTCCTCTGGAGCTTCACGCCCTTCTCTAAATGTCCTCTAGGTGTGGGCTGAAGGG ACATTACCTTTGAGGGGCCTTTTCATCTGAACAGGTCACCTAGCCTGACATTTCTCCCTAGGGAGAACTA GGGGCATCCTCTTGCTTGCTTCTTGTCAGTTGAGTTCAAAGCCCAGCTCAGGAGTGGGGGGGGGGGGTGC AGTGGGGACGGTCTCCATTGCGACTAGGTCACCGGCCCTGGGCCATGCCCTCACCCACCCACTGCTCTCC TTCTAATACTTTGGCATCATGATGTACTATTCCTCCAAGCACCTCTGCCGTCTCCACAGAGACCAACTTG ATGTGCTCAGCATCTTTCGGGCAAAGGGCCTGGATTCCGTAGCTGCTTCTGACAGGCTTTCAGCCCCCTG GACCTTCCCTTTCTTGCTTGCCCATCTTGTCCCTTGAAACTGCAGGGCCCACCCATGCTTGTGGTGAGAG TGTTTCTGACTGTGAAGGAAGCTGGTGAGGTTTTTTTTTCTCTCTGGTGTGGGCATTGGACTGGTGGAAC CAAAAATAGGTTGGATCGGGTAGGGTATGTTTGAATCCCGATCCTCTGGCATCTCTGGGGCCTTCTGTGC CCCTTAGTATAACCATCCACTCCTTAGAATCCCTGTAGTTCCATGTCAGAATCCCATTCCTAGCAACTTA CTCGAGGTCTCCCAGACTCTGCTGTCCCTATGTCCCCCTCCCTTTTGCCTGGCACCAGGTAGGAGTGAGA TATGCAAATTAATTCCCAGTGAGACTCAGACCAGTCCCTCATCTCCCCTCTGGTCCCACAGGAACCAGTA CCTCTTACAGCCTGATCTCTTCATCCCCTCTCAGGAACACCTGTGGCCCATTATTGCTTCATTA ac124169.3 (114051-112728) - GGGCACCTACCCGCGATGTCCTGCTGGTCTCTGCAATCATCACCGTCAGCCTTAGCGTCACTATCGTCCT CTGCGGCCTGTGCCACTGGTGTCAGCGCAAACTG ac124169.3 (91122-91019) phase 0 - GGCAAACGCTACAAGAATTCCTTGGAGACGGTGGGCACGCCAGACTCGGGGCGTGGGCGCGGTGAGAAGA AAGCCATCAA ac124169.3 (86499-86420) phase +2 - [CGACCTAGACAGAGACTTTTGGAATAACAATGAAAGCACAGTGCAGCAGAAATGGAGTTCCTATCCTCCC AAGGAGTTTATTCTAAACATTTCACCCTACGCCCCTTATGGCGACCCTCGACTGTCCCTCAA] ac124169.3 (82705-82574) phase +2 - rare read through GTGAGTGACTTTACCTGGTTTGATCATATGTACTGAGTATCCGCGCACGCCCCACCCTTCCCTTCTCCTG *** CCCCCTCTCA ac124169.3 (82573-82494) - conserved exon, expressed in Homo but not detected in Mus transcripts [CCCGCTCTTCCTCCGTCGTTAACCCTTCGTTGTCCTGTGGGATAGAGTTGGAGGTGGCTGCCCTCCCCCA ACCCCCACCGCTCCTGCCCTAGGCGGTGGGGAGGGGCCCCCTCCATTGTCGTGGTGCGTT] ac124169.3 (82067-81938) - [TGGCACGCTCCTGTCAGGCGCCAAAGTGGCCACTGCGGCGGCGGGGCTGGCGGTGGAGCGGGAAGGCCGG CTCGGGGAGAAGCCGGCGCCGGTGCCACCACCCGGAGAGGACGCCTTGAGAAGCGGCGGGGCTGCCCCCA GCGAGCCGGGCAGCAGTGGCAAGGCGGGGAGAGGCCGCTGGCGGATGGTGCAGAGCCACCTGGCCGCAGG GAAGCTCAACTTGTCCAA] ac124169.3 (81677-81450) phase +2 - start 2 runs into next exon CTCTGGCCACAGGGTAGGCTTCTGTATGTGAGTCTGCCTCCTCTTTTCTTCCCACAGAGTATGAGGAATG GCTGCCCTGCCTCCCTAGCCATTACTAGGCCAACTCTGTGCTGGCCTGGATTTCTTTCTGTCTCCAAAGG ACAGTAGTACCTAGAACACAGAGGCAGATGTTCCTAGTGTCCCCCTAGTGAGATGGCAGAGGGGTGGCAG CAGCTCCCTGCCCCTCCCATTCCAACATGACAGGCAGTTATAGGGCCCTGGGGACCTGCCTTCACCACGC *** AGCTGCCACAGTTCCTGCAGCCCACTCAGACCGGCAGAGAGGTCGGCCCAGACAGAGGTACTGGGGAACC AGCGAGCTAGGTCCAGAGGTGGGTGGGCGGAGCCAGCCTGGGAACCTCAGGGTGGGTGAGGTGGTGGCAG CGACTGCAGCAGTGACAACTCCGATGGAGGCCTGGCGAGGTCCAGCCGAGCGTGCCCTGCATTGGGGCCT CCCAGCCCTGGCCCTCGGCTTCTTTCTCTTCCACTGTGATCCCTTCACCTGCTTCTCCTTTCTCTCCTCT CCTCCACCCGCCCCAAG ac124169.3 (78740-78164) - [TTTCGAGGACTCCACCCTGTCCACGGCCACTACCCTTGAGTCTATCCCCAGCTCCGCGGGAGAGCCGAAA TGCCAGCGACCCCGCACACTGATGCGGCAGCAGAGCCTGCAGCAGCCGCTGAGCCAGAACCAGCAGGGCC *** GGCAGCCCAGTCAGCCCACCACCAG#CCAGAGCCTGGGCCAGCTGCAGGCCCACGCGGCCTCGGCACCGGG CTCCAACCCCCGGGCCTATGGTCGGGGTCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCA GCTGGGGGCCGCAGCCGCTCCAACCCAGGCAG#CTGGGACCACGTGGTGGGGCAGATTCGAAACCGAGGCT TGGACATGAAATCCTTCCT] ac124169.3 (78163-77795) but delete region between # signs in ab075901 phase +2 - [GGAAGGCCGGATGGTGGTGCTATCCCTGGTATTAGGGCTTTCGGAACAGGATGACTTTGCCAATATCCCT GACCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGCTCAGGGGGACAAGAG] ac124169.3 (74124-74002) phase +2 - GTTGCCTGCAGGAGGGAAGGCTGTGAATACAGCCCCAGTGCCCGGCCAGACGCCACACGATGAGTCTGAC CGCAGAACGGAGACCCGTTCCTCTGTCTCGGACCTCGTCAACTCCCTTACCAGCGAGATGCTCATG ac124169.3 (68912-68777) phase 0 - CTCTCCCCGGGTTCTGAGGAGGATGAGGCCCACGAGGGCTGCAGCCGAGAGAACCTGGGCCGAATCCAGT TCAGTGTTGGCTACAACTTCCAAGAGTCCACACTCACCGTGAAGGTCATGAAGGCCCAAGAGCTGCCAGC CAAGGACTTCAGCGGTACTAGTGACCCCTTTGTCAAGATCTACCTGCTACCCGACAAGAAGCACAAACTG GAGACCAAGGTGAAGCGGAAGAATCTAAACCCGCACTGGAATGAGACCTTTCTATTTGAAG ac124169.3 (65310-65040) phase +1 - GGTTTCCCTACGAGAAAGTGGTGCAGAGGGTCCTCTACCTCCAGGTCCTGGATTATGACCGTTTCAGCCG CAATGACCCCATTGGGGAGGTGTCCATCCCTCTGAACAAGGTGGACCTGACCCAGATGCAGACCTTCTGG AAGGATCTGAAGCCATGCAGCGATGGGAGT ac124169.3 (61634-61465) phase 0 - GGGAGCCGAGGGGAGCTGCTCTTGTCCCTCTGCTACAACCCCTCTGCCAACTCCATCATCGTGAACATCA TCAAAGCTCGAAACCTCAAAGCCATGGACATCGGGGGCACATCAG ac124169.3 (61085-60971) phase +1 - ACCCCTATGTGAAGGTGTGGCTGATGTATAAAGACAAGCGGGTAGAGAAAAAGAAGACCGTGACAAAGAA GAGGAACCTGAACCCCATCTTCAATGAGTCTTTCGCCTTCGACATACCCACGGAGAAGCTGAGGGAGACC ACGATCATCATCACT[GTCATGGACAAAGACAAGCTCAGCCGCAACGACGTCATCGGCAAG ac124169.3 (60477-60323/60278) earlier pickup in ca325192 only, joined to alt. pickup below phase 0 - ATCTACCTGTCCTGGAAGAGCGGACCAGGTGAAGTGAAACACTGGAAGGACATGATCGCTCGTCCCCGGC AGCCTGTGGCCCAGTGGCACCAGCTGAAAGCCTGAGTGGGGCCAAGGGAGGCTCCAAGGGCCAAGGCCTG *** GCTCCCCATCATGCCCCTACCACTTTATGCACAATGCCCAGCCCGGCACCCCTGCCATGGTGAGGGGAGA CCCCGAGGGCTCAGCCAGGGAGGGGTACCAGAACTCTACTGGGCCCCATTTCTAGGAAGTACCAGCCCCA CCCCATGAGTCCAGCTCAGGGGTGGGGGCTTGGGAGCCATTCCCTGCTTTGCCTCTTTCTTTCCTGATTT GCTGATACTAAAGACGTGGGGGAGAGCTCAAGAGCCAGATGGGCAGATCCCTCCAGAGGCCCGCCAGGTG GGCATAGCCCCCGTTTTCTTTAAGGCAGTGCCTGGAGTGGAGAGAAGCCACCCCTTCCCTAGATCCCCTT TTTGGGGCCCAGAAGAGGAAGGCCGAGGCGTTTGGCCACGGCCTGGTCATCAGGCCCATCCCCAGCTTCA GGTGCCGGCTGGGCCCTGGACACTGAGGATAGTATATAGCCTGTGCTCCAGAGTCCTGGAGATGTGGCCC TGTGTATTTGTGTTGTGTCTACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCCACATGCGTG TACACATGTGCACCTGGAAGCTCATGCGCACGTGTGGGAAAGGGGGAGCTCACTCCCTATCGCCCTGGGA CCAGCAGTGCTGATTGGCTATGGAAAATAGCAGAGTTTCGTGAGGATGAAGTAGGGCTGGGTCAGGTAGA GGTCAAGGCCACAGGGAAGGTAGGAGAGGAAGGGTATGGACGGCTGAGAAGAAGTGGGGACCAGGGCAAA TGGCTGTTTCAGCTGCCTCCTGGCACCCACTTTGCCTGTCTCTGTAGCCCCCACCCCCACAATTCCCCAG TAGCAACTCTCTACTGCAATGTCGTCCCTTGGGCCTGGGCTCACACTTTGTAGGCACCTACTCACCGTGT GCATGGCCTTCCAACAGGGCACCACTCCCATCCTTCTCAGGCATTCCTAACCCCTCGCCCAGGGACCCCC ACCTTTCCAAATCTCATTTTGCAGTCAAATTGGCATCTGCTCCACACTCTGGCTTGGATATAGCCCCCGA TCCCCACCCCTTGCCCCGACACCTCCACCTTTTCTTTGCATAATCTGATCAACCCCTGGCCTTCTCCAGG CTGTCTTGACACATACCCCACCCCCACCCCTACCCCCACCCCAGAGTAGCAGCTCTTTCTGCCCCTCCCA CCCACCACGCAAGCAGAGGAAGCGGGGAGCATTCCAGGAGTCTGAAGTTGCCATACCCAAAGAAGCTGTC GTCCCTTCTCCCCGCCTCTGCTGAGACTAGAACTGGCTTCCCTTTGGAAATAGCAGACTCCAGAATGATC CCTCTTAAGTCCTGTCGTCCCTCTGTGCTGTATTGAAAAGACCCAGCTGGTGAAAGAGCCTCAAAACCAA TTCAGAGACTTGAGCCCAACATACCCTAATTCTACCACCAGGTGGCACCAGAACACCACATCTATGGTAG CAGTTGGGGACCATAAATACAGTTCTACCCTGACTGGCACCTTGACACCCCAAGGATGGAAGGGGCTCTG GACTGCATCTGCTTATCTAGAGCACAGTGGGAACACAGTTATGTGGGCACAGTTTCCTTCAGTGGGCTTC CCCTTAAGCTCACCCTTCTGCTCTAGGTGGGAGATCTCCTTTTGTCCATAGCAAAATGTCCTTAAATCAG ATTTCACACCCTGTCCCCAGGGACCTGGAGGAATCCCTTATGTAGTAGGTGAATCATTCGTAGAGTGAAT AATTCCATTGTAAAACAAATAGTTACCCATATTACTTGTAAATCTAAATGTTTGTATACTACAGCTTTTG CTTTAAATAGGACCATCCCCAACTCCCTTGCCCAGCTGGGTGTAACCCCAGGAAAGGGACCCTCCCAACT CCCTGCAGAGGCTGTGTGGGAACAGAAGAGGGTAATGTAGAAAGTCTGGAAACTCGAGAGAAATCGCTGC CATCCTTCCTTCCATCTGCCTCAGTCTCCTGAGTGCTTCCACCAAGGCATCCGAGGGGCCCGAGCAACCT GCACCAGCAGGTGTAAAGTTGGCAGCGGGTTTATGCAGAGCGTGCTCCTGCACCTCTTAGCCAGTCAGCT CAGCATCCCCCCACATAGCTGTTCTCCCCTCAGACTACTAGGAATAGTAGTGACCCAGCCTGGGTGGAGG GGTGGGGGGGCCAGCCAGACCTTGCAAACAGTGGGTGGAGAACAGAGTGGGTTTGCACAGGGTGCAGCTG GATGACACAGAGGCTGGGCATAAGATGTTAGGGCAACTGGGGGAACATGGAAATGGGGGGGAGGGACTTG AGGGTGAGGAGGGCACCAGAGCTCTGCCACCACTGTCCTAGGATCTTGGGCAAGTCACCCACACTCCCTG GGCCTCAGTTTCTCCATCTGTAAAATGATGGTAATAATACTTCACCTACCTCATGGGGGAGGTTGTGAGG CCACCATCACCTGACCTAGGGGGTCAAGGCAGGAGGGCTCTGAAGGTGCTACCCAGAGCAAAGTTGTCAG TGAGGCCTGAAAGCAAGGCCCACCTGCCAGTCCACCCTACCCCACAGAGCCTCTAGGGACCGCCAGAGCC AATCTGTCTCTTCACTGTGTCCCCACCCCCTTTATGAGCGTCATCTGACATCTTGTGGGCACCCTAGACT TAGTTGTTACATTGTTTAGGTAGCTTTTCTTGTGATCATCTTCTCTGTGTAACTGCTATACAAATTCCAC CTGCCCCAGCACACCCCTCCACCTGCCCTCCAGCACCAGAGGCCAG]GGAAGGGACAAAGGAAAACAGCCA CAAAAGAAAAAAAAAAAAAAAAAAAGCCAAGGGGACTCCCAGCTCAGCTGGGGCCCCCAGGGGTGGGAAC TGGTGGCGCTGTTTGTATTGTGTTTGAGTCCTTGAGCGCAAGTGTTTTATAAAAAATAAAACAAAAATCC *** ACTATCACAAAAAAAGAAAAAAAATACAGCAAAGAGAACTGAAGACAAAAGGGAAAAAGAACCATACAAT TTTTTTCCACCATATGCACCCTCTAAGCCAGCAAAATTTTCCTCTTTGCAAAATCATATTTTTGTGGGAA TGGGCCCTGCTTTTTGTGGCAAGGCCTGTTCTGATTAATAAAGGATCGTG ac124169.3 (56122/53206-52853) -------------------------------------------------------------------------------- 60. Mus syt8 Mmsyt8 Abundance low Chromosome 7 Size >55.5 Kb Transcript complexity affecting Nterm and Cterm MQ^ ADRSMKMGHALNPFSTSAPLDATAGPSLIPDLITRIP^ - alt.Nterm SCAPGL(G)](W)PRWTLFIAILAAGVLLVSCLLCVICCYCHRHRHRKQPKDKETVGLGSARNSTTTHL^ VQPDVDCLEPCSGGDQQWGRLLLSLEYDFGSQE^ IRVGLRQAGNLKAEGTADPYAWVSVSTQSGRRHETKVHRGTLSPMFEETCCFL^ - alt.Nterm VPPAELPKATLKVQLWDFKRFSEHEPLGELQLPLGTVDLQHVLESWYQLGPPGTTE^(RPT-end) alt.Cterm if below is skipped [PEQMGELCFSLRYVPSSGSLTVVVLEARGLNPGLA]^ EAYVKIQLMLNQRKWKKSKTSSKKGTTTPYFNEAFVFLVPVSQLQ^ SVDLVLAVWARGLQLRTEPVGKVLLGSRASGQPLQHWADMLAHARRPIAQWHHLRSPREVDRVLALQPRLPLLRPRS - start 1 CGCTCTCAAGGGAGTTTCCTGGTTTATGAGGGCCAGCAGTTCCGGTCATTAG al603651.14 (100543-100492) join to # below - start 2 ATTCATTTGATCACTAGCAACAGGCACCACGGGCTCTGCTGTGGGCATCAGGTGCTGCCTGAGAGTGGAC AACCAGCCTCCCAGTGACTAGGGTCTGAGCAAGCAGGCCTGAGTCCACCCGTCACAGGAAGCA[GTAGGTA TCAG al603651.14 (100444-100312/100301) first pickup join to # below, second pickup join to % below - start 3 ACATCATGGTTCCATGTGTGCAGGAGGACCTCTAAAGGGAGACGGAGAAGGCAGAGACTGGTCCCTTCCT GATCTGCAGCTGCCCCGAATCACTGAGAGATGCAAG *** al603651.14 (98559-98454) join to alt. pickup below phase +1 - %GGTGGACTCAGTACTGGCTGCTGACAGGTGAAGAGTCAGTACATAAAGGACCACCCCTCAAATGACCTGG ATTCCACAACTATCTCCTCAAAG]CTGATAGGAGCATGAAGATGGGGCACGCCTTAAACCCCTTCAGCACC *** TCTGCCCCACTTGATGCCACAGCTGGGCCCAGTCTCATCCCAGACCTCATCACCAGGATCCCCT al603651.14 (97323/97230-97120) phase +1 - CCTGTGCCCCTGGCCTAG]GGCCTCGCTGGACCCTCTTTATCGCCATCCTTGCTGCTGGAGTCCTCTTAGT CTCCTGTTTGCTCTGTGTCATCTGTTGCTATTGCCACCGCCATCGCCACAGGAAGCAACCCAAGGATAAA GAAACTGTGGGCCTGGGCAGTGCCCGTAATAGCACCACTACTCACCTG al603651.14 (97036/97018-96849) phase 0 - #GTTCAACCAGATGTGGACTGCCTAGAACCCTGCTCTGGAGGGGACCAACAGTGGGGTCGACTCCTGCTGT CACTAGAGTATGATTTTGGAAGCCAGGAG al603651.14 (96499-96401) phase 0 - ATTAGAGTGGGCCTGAGGCAGGCTGGAAACCTGAAGGCTGAGGGCACAGCAGACCCCTACGCCTGGGTCA GTGTGTCCACCCAGTCTGGGAGAAGACATGAGACAAAGGTGCACCGAGGGACGCTCTCTCCCATGTTTGA AGAGACATGCTGCTTTCTG al603651.14 (96271-96113) phase 0 - GTCCCACCAGCAGAGCTGCCCAAAGCCACTCTGAAGGTGCAGCTGTGGGACTTCAAGCGGTTTTCAGAAC ACGAGCCACTGGGTGAGCTCCAACTACCCCTGGGCACCGTGGACCTTCAACATGTCCTGGAGAGCTGGTA CCAGCTAGGCCCTCCAGGGACCACTGAG al603651.14 (96039-95872) phase 0 - [CCTGAGCAGATGGGGGAGCTGTGCTTCTCACTACGCTACGTGCCCAGCTCAGGCAGCCTGACTGTGGTTG TACTGGAGGCTCGGGGTCTGAATCCGGGGCTTGCAG] al603651.14 (95733-95628) phase +1 - AGGCCTACGTGAAGATCCAGCTTATGTTAAACCAGAGAAAATGGAAGAAGAGCAAAACATCCTCCAAGAA *** if joined from last but one exon AGGCACGACTACCCCCTACTTCAACGAGGCCTTCGTCTTCCTGGTTCCCGTTAGCCAGCTCCAG al603651.14 (95542-95409) phase 0 - AGTGTGGACCTGGTGCTGGCTGTCTGGGCCCGTGGTCTGCAGCTCCGGACTGAGCCTGTGGGCAAAGTGC TGCTGGGTTCCCGGGCTTCTGGCCAACCCCTACAGCACTGGGCAGACATGCTGGCCCATGCTCGGCGGCC CATCGCCCAGTGGCACCACCTGCGGTCCCCCAGGGAAGTGGATCGTGTTCTGGCCCTGCAGCCTCGCCTT CCCCTGCTTAGGCCTCGCTCCTGAAAGCACCGCGGGTCTCAGTTTTCCCAGATGGAGAGCTGTGGATATT *** TGTGCAGGCTCTTCAGATCTCTCTGTAATAAACAAATTCTCTTTCACACTC al603651.14 (95325-94995) -------------------------------------------------------------------------------- 61. Mus syt9 (syt5) Mmsyt9 Abundance moderate Chromosome 7 Size unknown (draft) Transcript complexity affecting Cterm MPGARDALCHQALQLLAELCARGALEHDSCQDFIYHLRDRARPRLRDP^ DISVSLLTLVVTACGLALFGVSLFVSWKLCWVPWRERGLFSGSKDNNQEPLNYTDTETNEQENSEDFLD PPTPCPDSSMKISHTSPDIPLSTQPGGQENCAHAVRVQRQVTEPTPSA^ RHNSIRRQLNLSNPDFNIQQLQRQEQLTGIGRIKPELYKQRSLDNDDGRRSNSKACGKLNFILKYDCDLE QLIVKIHKAVNLPAKDFSGTSDPYVKIYLLPDRKTKHQTKVHRKTLNPVFDEVFLFPVHYNDLEARKLHF SVYDFDRFSRHDLIGQVVVDHFFDLADFPRECILWKDIEYVTN^ DNVDLGELMFSLCYLPTAGRLTITIIKARNLKAMDITGAS^ DPYVKVSLMCDGRRLKKRKTSTKRNTLNPVYNEAIVFDVPPESIDQIHLSIAVMDYD^(RSQ-end) alt.Cterm - alt.Nterm if later pickup below RV]GHNEVIGVCQVGNEAERLGRDHWSEMLSYPRKPIAHWHSLME^ KR - start1 GAGGGGCCGCGCGGGAGACGGAGAAAGCCCGAGCGAGCGGCTCTCCGAGAGCTGCATGCAACCGGTGGGA GGCCGACCCGGCTGGCGCTGCGGCTCGGGTGGGGAGCGCGGACCGGCCGGTGGCGGCGGCGGCGGCGGCA GCTCTGAGCTGGCAGGCGGAGGGCTTTCTCCCGCGCCCGCCTGCCCGGCGCGGTCCGAGGATGCGGGGGG GCGATGCCCGGGGCCAGGGACGCGCTCTGTCACCAGGCGCTGCAGCTGCTGGCCGAGCTCTGTGCCCGAG *** GGGCCCTGGAGCACGACAGCTGCCAAGATTTCATCTACCACCTGCGGGACCGTGCCAGACCCCGGCTCCG CGACCCAG ac127431.1 (9812-9455) phase +1 - ATATCTCTGTGAGCCTGCTAACCCTCGTGGTTACTGCCTGTGGTCTGGCCCTTTTTGGTGTCTCTCTTTT CGTGTCTTGGAAACTGTGCTGGGTTCCGTGGCGAGAGCGAGGCCTGTTCTCTGGTAGCAAAGACAACAAC CAAGAGCCTCTTAATTACACCGACACAGAGACAAACGAGCAGGAGAACAGCGAGGACTTCCTAGACCCAC CTACACCCTGCCCTGACTCCTCCATGAAGATAAGCCACACTTCCCCCGACATTCCCCTCTCCACCCAGCC AGGGGGCCAGGAGAACTGTGCCCATGCCGTCCGTGTGCAGCGACAAGTCACAGAGCCAACACCATCAGCT CG caaa01152814.1 (3912-3561) phase +2 - GCATAACTCAATCCGAAGACAGCTCAACCTGTCGAACCCGGACTTTAATATCCAGCAGCTTCAGAGGCAG GAGCAGCTGACTGGGATTGGTAGAATTAAACCAGAGTTATACAAACAGAGGTCACTGGACAACGACGATG GGCGGAGGAGTAACAGCAAAGCCTGCGGGAAACTGAACTTCATTTTAAAATATGACTGCGACTTGGAACA GCTCATTGTGAAGATCCACAAAGCCGTCAATCTGCCTGCCAAGGACTTCTCTGGGACTTCAGATCCTTAT GTCAAGATCTACTTGCTTCCTGACCGGAAAACAAAACACCAGACTAAAGTTCACAGGAAGACCCTGAACC CTGTGTTTGATGAGGTGTTTTTATTTCCTGTTCACTACAATGACCTTGAAGCTCGGAAGCTTCACTTCTC TGTGTATGACTTTGACAGGTTCTCTCGCCATGACCTGATTGGTCAGGTGGTGGTGGACCACTTCTTCGAC TTGGCCGACTTCCCCAGGGAGTGCATCCTTTGGAAGGATATCGAGTATGTCACCAAC caaa01005218.1 (12748-12202) phase 0 - GATAATGTGGATCTGGGCGAGCTTATGTTTTCACTCTGCTATCTTCCAACGGCTGGCAGGCTGACCATCA CCATCATAAAAGCAAGGAATTTAAAGGCGATGGACATAACAGGAGCATCAG caaa01207124.1 (19865-19745) phase +1 - start 2 reads through to next exon CTCTAGACTCCAAACAGAGAAGGGGAGGCTTCCTGCACTGGCCACACATTCCCAGCGTCTCTGTGTGTCC TCACAGTGCCCTGTTCTCATGCCTGTGCAG caaa01207124.1 (17896-17797) - ATCCCTACGTGAAAGTCTCACTGATGTGTGACGGCCGGAGACTGAAGAAGAGGAAAACCTCCACCAAGAG GAACACGCTTAATCCCGTTTACAATGAAGCCATAGTCTTCGACGTCCCTCCCGAGAGCATCGACCAGATC CACTTGTCCATAGCCGTCATGGACTATGACCG caaa01207124.1 (17796-17625) phase +2 - TGTAG]GTCACAATGAGGTCATTGGCGTGTGCCAAGTAGGAAACGAGGCTGAGCGGCTGGGCAGAGACCAC *** TGGAGTGAGATGCTGTCATATCCTCGGAAGCCCATCGCACACTGGCACTCTCTGATGGAG caaa01207124.1 (15469-15340) phase 0 - AAACGATGACTATGGAGAAGAAGACTGCTTGTGCCAAGGACACAGTCGGACAACCATGTAACAAAGATCT *** GCAGTAACTTTTCCCACCTAGCAACACCCAGATGACTCCAGTGAAGAAATACTCAGCTGTAACCACAGCA ATAACTGGCCCTCTTTCCAAATTGGATGTGGTGAATCTGAAGGGTTCATCTATTTTCTTCAGGTGGCCCA AGGTGATATGCTCTAGAGAAGCTCCTCCCTCACTGTCAAAAGCCAAGTTGGACTGTGGAAGAGAGCAAGT GGCATAGTAAGTGGCTTGAGTGCCAAGATGGCCTTTGGTTGGATGGGCATGACACTGGTCCTGACAGTGG TCAGTCTAACATGCAGTCATTTGATTTGGATGCCCTGGAAGGACAGAATATTTAAATATATATCCAGGTG CTAAATAGGCAGCAGATTTCAAATCAAACTTTACTACCTGTGAGCTAATGACTGTCTTCAGAGAATAATT CCACCCCAGAAAGTGTTCCAGTTTTCCAAGTAATGGCCCAAGAAAATACTAGGCTAAGCCAGCCTGGAAA AAGTCTCATGCAAGGCAGGTCAGTTCATAGCAAACTCACTGTCCCTTCCCATGCACATGGCAGAGTCCCA CTTAGCCATGGTCATTCTTCACAGAACCCAGGTTCTGGGATTCTAAAACATTATTTCCAAGTAGCCTCTT CCTTTCCAGCAGTGATATTACTAGAGTGAAACGTGCCATCTTTGTTAGGGACACTTGCCTCCCAGTGGAA TATGCATCCAGGAATAATCTTTCCTGGACACAGAAGTGTGTGTTATGAGATAAGATCACTGAGAGATGAC ACTGGAAAAAGGCACAGCTTTTGGGCTTTCTTGACACAGCTGCCTTCTGGCTGTTTCCATATGCAACAGC CCAGGGTATAGACTTGGGCAGCCACAGAAAGAGGCTCTTTTCCACCTCAGACACATACCACTTTTGCAGC ACTTGGGGAATGGAAATACCTACAAGAATGAAGGCCAAGGGCTCTCCCCAGGGTAGCTCATCCATTACCC AGCATCCTCCTGGACCAGTCTACTGCCAGTTGTGCACCTCATCCTTCCTGTGTCTGCCTCCAGGAAATGA AACCAAAGGCCCCAGTACCCCCTGAATGGACTGGGGGCTATTACCTAAAGGTCCTCTCTCATCCTGGGTC TAGAAGACCCTCCCCCTGCATCACTGTTCCACAATTCCATTCCCCTCCAGTCTCTGTAACAGAACCCAGA GTTGGGTTGCAGTTAACCATCCTGGAGAGCAGCCTCTCTTCATTTCACTTTGTTTTTCAGTGTAGGTTGC ACCCGAGGGATGCAGCATTACAGCAGATGTTGGAAAGTTCTGGCTTCCATATACACCTAGTACAAGAAAT CCTACTGCCAACGCCAGATCTTGTCGTGTCTTAAAAGGGTGGAGACCTTTGGTTGTATAAGGCAATGTTA ATTCATTCAAGCTTAGTGCATTCCCTGGCCTCCCAGATCCACTCCCATCTCCTTCCAACTTCATTTGAAG GGGTTCAAAGGGAACCTATGTTCAAAGTTCAGCCTATGTCTAATAAAATGAGAAAAACACACCTTCCTTG CCCATCCCTTCCATTCAGACATCCGCCACCATATCAGTATTTAGAACCAAAGTATGAAGGCCAAGTGCCA ACAGGACAGGGAGCAGAAATATTGTCACTAGATCCAGGCAGATGTGCCTAGAAGAATGGTCCCAAAGAAA CTAGAATGGCTCCAGCAAAAGATTATCAGGCAGCCATCTTATTAAGCTTTGACATGTCCTTGGCAATGGG AGCTCAGGTTGGAGATCCTGGGGTAGCCTGTTGTTCCCACCTCAGGATCTCCTCACCTTGAGCTAGCAGC CCTGGGGTACTATGGAATAAGCTACTGACTCAAAGATAGCTTTGTGGGGGCATTCAGGCGAAGAAGACTA CCCACGTGGTAAACAGATGGCTTTGTGTGTGGAGAGCTTTACCTAGCCAGTACAGCTGTGGCCAGAAGCT GGCTATCAATCTGAATTCCCTCAGCTCATTTGCAACTCTGCCTCTGTTCTCTTGTGTTCTGTTTGGTCTC CCTTTAGTTTCCTAGTAAATATTCCTTTTGAAAAAT ac027680.5 5770-7905 -------------------------------------------------------------------------------- 62. Mus syt10 Mmsyt10 Abundance low Chromosome 15 Size medium (draft) Transcript complexity affecting Nterm MSFRKEDGVSSLCQKALHIITELCFAGQVEWDKCSGIFPADRSGQGGGGT^ DISVSLLAVVVSFCGLALLVVSLFVFWKLCWPCWKSKLVAPNLSVLPQSISSAPTEVFETEEKKEVEENEKPAP KAIEPAIKISHTSPDIPAEVQTALKEHLIKHARVQRQTTEPTSSS^ RHNSFRRHLPRQMNVSSVDFSVGTEPILQRGETRTSIGRIKPELYKQKSVDSEGNRKDDVKTCGKLNFALQYDYE - alt.Nterm NELLVVKIIKALDLPAKDFTGTSDPYVKIYLLPDRKKKFQTRVHRKTLNPLFDELFQFPVVYDQLSNRKLHFSIY DFDRFSRHDMIGEVILDNLFEVSDLSREATVWKDIHCATT^ ESIDLGEIMFSLCYLPTAGRMTLTVIKCRNLKAMDITGSS^ DPYVKVSLMCEGRRLKKRKTTTKKNTLNPVYNEAIIFDIPPENVDQVSLCIAVMDYD^ RVGHNEVIGVCRTGLDAEGLGRDHWNEMLAYHRKPITHWHPLLE^ LPGRATSFDSQGSCSSPRPPSTP - GTCCGTTGGCGCGCGCCGCCCTCCTGCGCCCGTGCCAACCATGGGGCCAACTCGCAACTCTTAGGGCTCT GCCTCAGACCAAGGGAGATCAACGGAGCTGCGAGCAGAAGCCAAGATGAGTTTCCGCAAGGAGGACGGTG *** TGAGCAGCCTGTGCCAGAAGGCGCTGCACATCATCACCGAGCTGTGCTTCGCGGGTCAGGTGGAGTGGGA CAAGTGTTCGGGCATCTTTCCAGCCGATAGGAGCGGCCAGGGAGGAGGTGGCACAG ac140313.1 145934-146199 phase +1 - inclusion of this exon introduces stop codons in all three frames [TGTTGGGAACCGAACCCAAGGTCTTCTGTATATCGGGCAAACAGTCCTGACCACTGAGATACACCTCAGG GCTTACAGCTAAAATTCTGAGTCCAATTCTTACAA] ac140313.1 153412-153516 - ATATTTCAGTCAGCCTGTTAGCGGTTGTTGTAAGCTTCTGTGGCCTGGCCTTGCTGGTTGTCTCCCTTTT TGTCTTCTGGAAGTTGTGCTGGCCATGCTGGAAGAGCAAGCTTGTGGCCCCCAACCTCAGTGTCCTTCCA CAAAGCATCTCAAGTGCTCCAACTGAAGTTTTTGAGACTGAAGAGAAAAAAGAAGTGGAAGAAAATGAAA AGCCAGCACCCAAAGCCATTGAGCCTGCAATAAAAATCAGCCACACATCCCCCGACATCCCAGCAGAAGT GCAGACAGCTTTAAAGGAGCACTTGATTAAACATGCTCGAGTGCAAAGGCAAACAACCGAGCCTACGTCT TCATCCCG ac140313.1 160641-160998 phase +2 - CCACAACTCCTTCAGGAGACACCTACCAAGGCAAATGAATGTCTCCAGCGTCGACTTTAGCGTGGGCACT *** GAACCCATCTTACAAAGAGGAGAAACGAGAACGAGCATCGGGAGGATAAAACCAGAACTCTACAAGCAGA AATCGGTTGACTCCGAGGGCAACAGAAAAGACGACGTCAAGACCTGTGGGAAACTTAACTTTGCGCTCCA GTATGATTATGAAAATGAACTCCTAGTTGTTAAAATTATCAAAGCTTTAGATCTCCCAGCTAAAGATTTC ACAGGAACTTCTGATCCTTATGTGAAGATCTATCTTCTTCCGGATAGGAAGAAGAAATTTCAGACCCGCG TGCACCGGAAGACTTTAAACCCTCTGTTTGATGAGCTATTTCAGTTTCCGGTGGTTTACGATCAGCTAAG CAACCGCAAACTACACTTTAGTATATATGATTTTGACAGATTTTCCAGACACGACATGATTGGGGAAGTG ATTCTTGATAATTTATTTGAAGTCTCTGATCTCTCCAGGGAAGCCACAGTATGGAAAGATATCCACTGTG CTACCACA ac140313.1 (56692-56125) phase 0 - GAAAGCATAGACCTGGGGGAAATCATGTTCTCCCTTTGCTATTTGCCAACTGCTGGCCGTATGACCTTGA CAGTGATCAAGTGCAGAAATCTGAAGGCAATGGACATCACTGGGTCATCAG ac140313.1 (34766-34646) phase +1 - ATCCTTATGTCAAAGTGTCTCTGATGTGTGAGGGCCGAAGACTTAAAAAACGGAAAACAACTACAAAGAAAAAT ACTCTCAATCCCGTGTACAACGAAGCCATTATCTTCGATATCCCTCCAGAGAATGTGGACCAGGTCAGCCTGTG CATTGCAGTCATGGATTACGACAG ac140313.1 (33005-32834) phase +2 - GGTGGGGCACAATGAGGTCATAGGCGTGTGTCGAACTGGACTAGACGCTGAGGGTCTTGGGAGAGACCATTGGA ACGAGATGCTGGCCTATCACCGAAAGCCAATCACACACTGGCACCCCTTGCTGGAG ac140313.1 12376-12505 phase 0 - TTACCTGGCCGGGCCACCAGCTTTGATAGTCAAGGGTCCTGTTCTTCTCCCAGGCCACCGTCCACACCATAAAAG *** CCTCCAAATAAGACCATATCACAGAAAGATCTAGAACCGTGTGCTCATTGAATCAGAAACCTACACACAGAAAAC ACACGCGCGCACAGAACATTTGACTTCTTCATTTAAAATATACCCATGATAATTAATAACTTGATGCATAATTTC TCTTGGCTTATTTGGCTTATTTGTCTTCAACTTTGAGCATATTAATACA ac140313.1 16890-17163 -------------------------------------------------------------------------------- 63. Mus syt12 (syt11) Mmsyt12 Abundance moderate Chromosome 19 Size >31.5 Kb Transcript complexity affecting Nterm and 3'ends Antisense overlapping gene and it's sense overlapping gene, rhoD (Arhd) Thus 3 overlapping genes MAVDVTEYHLS^ VIKSPPGWEVGVYAAGALALLGIAAVSLWKLWTSGSFPSPSPFPNYDY[RYLQQKYGEAYVEAKLK^ (SGSLLGMTSGPLLGDHPAAKAALV-end) alt.Cterm if earlier pickup above RVPPWNDQRTTTRGPPSRKGSLSIEDTFESISELGPLELMGRELDLAPYGTLRKSQSADSLNSIS - alt.Nterm SVSNTFGQDFTLGQVEVSMDYDGASHTLHVAVLQGKDLLEREEATFESCFMRVSLLPDEQIVGISR^ IQRNAYSIFFDEKFSVPLDPTALEEKSLRFSVFGIDEDERNVSTGVVELKLSVLDLPLQPFSGWLYLQDQNK^ AADAVGEILLSLSYLPTAERLTVVVVKAKNLIWTNEKSTA^ DPFVKVYLLQDGRKMSKKKTAVKRDDPNPVFNEAMIFSVPAIVLQ^ DLSLRVTVAESSSDGRGDNVGHVIIGPGVSGMGTTHWNQMLATLRRPVSMWHPVRRN - ACAGATAAAGAAACTGAGGCCTAGAAGGAGAACAACATAAAGGGAGTGGGGTGCGCCCCTGGTGAGCACA GGGTTCCCTACCCAACACATCCACAAGCCTGCGATCCCAGGGTCCAACTTGGCTGCCCCCCCCCCCCCCA GGACCCTCACGCGCTTGGGGATCTCCGACTAGATCCTCGCAGCGCTGCTCTGCTCCTTGGAGTAGAGAGA GCGCTCGGGGTTGTCACTTTAAATTCAAGAAGGAGCAGGCGAGCGGGCGGGCGAGCGCGAGGGAGCGCGC GGCGGGCTCCTGGGAGCGTGCCCGGACTGCGGCGCTGCTCCATTCGGCCGCCGGGCCCCGCGGAGCCCCC ATCGGTGAGGCGAGGCTCCAGCAGGAGACGAGCGCCCCGCTACACTGCAGGGGTGGCGTAGCAGCGGGCG GCCGAGCGCCTGTGAGAGCCAACTGCGGGAGGCCAGCGTGGGAGCAGAGATAGAACCAGGAGTCGGACCC GCGTCCCCTCCGCGGAACCCCGG ac124347.4 53542-54054 - [TTCCTGTCACTGTGGGGGACATCATGGCCGTGGACGTGACAGAATATCATCTGAGCG] *** ac124347.4 63026-63082 phase= +1 - TCATCAAGAGCCCCCCAGGCTGGGAGGTGGGTGTCTATGCTGCCGGGGCCCTGGCTCTGCTGGGAATTGC TGCTGTGAGTCTATGGAAGCTCTGGACATCGGGGAGCTTCCCCAGCCCCTCCCCGTTCCCTAATTACGAC TACAG[GTACCTGCAGCAGAAATATGGAGAGGCCTATGTGGAGGCTAAGCTGAAG ac124347.4 70179-70323/70372 phase= +2/0 - CGGGTCCCTCCTTGGAATGACCAGCGGACCACTACTCGGGGACCACCCAGCCGCAAAGGCAGCCTTAGTA TAGAAGACACCTTTGAAAGCATCAGTGAGCTGGGACCCCTGGAGCTGATGGGCCGGGAACTGGACTTAGC *** CCCCTATGGTACTCTCCGAAAGTCACAGTCGGCTGACTCTCTGAATTCCATCTCCTCTGTGAGCAACACC TTTGGGCAGGATTTCACCCTGGGCCAGGTGGAGGTGAGCATGGACTATGATGGAGCCTCCCACACCCTCC ACGTGGCAGTACTACAAGGCAAAGACCTCCTGGAGCGCGAGGAGGCCACCTTCGAGTCCTGCTTCATGCG TGTCAGTCTGCTGCCAGACGAACAGATCGTGGGCATCTCCCGG ac124347.4 74102-74494 phase= 0 - ATCCAGAGGAATGCCTATTCCATCTTCTTCGATGAGAAGTTCTCTGTCCCCCTGGATCCCACAGCCCTGG AGGAGAAGAGCCTTAGATTTTCTGTGTTTGGTATCGACGAGGATGAGCGGAATGTGAGCACCGGCGTGGT GGAGCTGAAGCTGTCCGTTCTGGATCTCCCGCTGCAGCCCTTCAGTGGCTGGCTATACTTGCAGGACCAG AATAAG ac124347.4 77009-77224 phase= 0 - GCTGCTGACGCTGTGGGAGAGATCCTGCTGTCCCTCAGTTACCTGCCCACAGCTGAGCGGCTGACTGTGG TTGTGGTGAAAGCCAAGAATCTCATCTGGACCAATGAGAAGAGCACAGCAG ac124347.4 78592-78712 phase= +1 - ACCCCTTCGTCAAAGTATACCTGCTGCAGGATGGGAGGAAAATGAGCAAGAAGAAGACGGCTGTGAAGAG GGATGACCCCAACCCAGTGTTCAACGAAGCCATGATCTTCTCAGTGCCAGCCATTGTGCTACAG ac124347.4 79927-80060 phase= 0 - GACCTGTCTCTCCGGGTGACAGTGGCTGAGAGCAGCAGCGACGGCCGTGGGGACAACGTGGGCCATGTCA TCATTGGGCCAGGGGTCAGTGGCATGGGCACCACACATTGGAACCAGATGCTGGCCACACTACGCAGGCC TGTGTCCATGTGGCATCCAGTCCGGCGAAACTAACAGCCAGAGCAGGCCAGGTTGGGCATCAGAGCCTCA *** GGAGCCTGGCACCATCTCAGTTCTATCCAGCGATGCCCTCTCCATAGCCAGCTGGAGCTGTGAACACCAG GGCTGCCCCACCTCCTGGGGGATTTCTCATCAGCCATCTTGGATCCTCTGTCCAGACTGTCATGGAAGAA TGGGTGTGGCTCTTCATCCGGGGACCCAGGGTAATTTCCCCACTGAGGTCTACCTGTAGCTGGCTGGGGA CCCACCAGACTGACCTACTGTATTGAAGAGCCTTAGGAAGTATGTCCCTTGGCCTGCAGAAGGATGTGGG CTTCAGAACTTGCCAACTCCCCTTCTGCCATTCTCCTAGAGGACAGCTGTTAATAAATCTTGAGGGGATA GTT end 1 CCTGTGGTGGCAAGGCTAATATTAACAAGACATAGCACTCAGGATGCCAGGAACCCAAGATGCCCTCTCT CATGCTGGCACCGAGTAACAACCCGGGCAGATGAACTTGGGAAGGAGCCCTGAGGGGTGGGGTAACAGCG AGGCTCTCTCAGACAGGGAAGGAGTTTCACTTTGAGGGTGAGAGAAAAAATAGCATCCCATCTTTACCAT GGGGGTCGTGGGGATCATGGTGAGCAGTCACACAATAGAAGAGACACAAACTACCCCATCCCAAACACAG ACTCTGCCCACTACAGTGGACACAAGAAGAGGCCAGGAGACCAGGCCCAACAGAAGCCAGTAGGCCGTAT GAAGGCTCCCCTGACCATCCACTCTGAGGGAACCAGAAGTCCCCAGTGGCCCAGGTCCAGATCCTTGTGT GGATCCAAAGCAAATCAGCACAGATTCCACAGACACCAGTGTTGGCTCGCGTCCCTCCAGGCCAGGCTTC TCTAGAAAGGAAGGTGTCAAGCCGGTCTAATCCAACCCTAGGAATTGTAGGTCAAGTTCCCTAAAACTAA GACTGCTCCTTAGTCTTGAGCCAGTAGGAACTCTGGGGAAATGGTGTTCCTAAGCAAAGGGCTTGGTTGT ACACCACTACCAGAATCGTTCTTTGGTCAGAGTTATTGAGGGGATCGCATCATACGTGAGGTGCTGGCTG TCACTTGAGAAAGGCAGTTCTCCTAGAGAAATGGTGGCTTTTGGCTCCTTCTCTCTGGAACCTGAAGATT TTTTTGTTTTTTGATTTTTGGGTTTTTTTTTTTTTTTTTTCCGAGACAGGGTTTCTCTGTGTAGCCCTGG CTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCTGCCTGCCTCTGCCTCCCAA GTGCTGGAATTAAAGGTGTGTACCACCACGGCAGACTCGAACCTGAAGATTTAAAAGGGCAGTGGGCGTG GGAGTGGTCAGAAGAGGGCTTTGGTCCTTGGCCCTAATGAATCATGGAGGCCCAGATGGAAGCAGGTCTA ATAATGGTCAATGATAAGGAGAAGGGCAGATAGAATAGGGACACAGGTCAACAGGACACCAGCCACAGCT GGACCCACTGAAGCTTCTCACCCTGTGGCCAATATTCAAGAGGTGAAAACGGGCCAGGGATAGTGGTGGC TGGGCCAGGCCTTGTCATCTGGAAGCCCCCAGACTCTTTCTAATCCAATGGCTTTGCAGGGAAGACCACA CCCCCCACCCTCCATCCCCTTATTCCTTCTTTCCTTCCTTCTATACTGCATGAAACAGTGTGCCCAGATG GCTGTGGTGGCAGCCAGGGATGATTCTTGAAACAAAATAAAACTGGGGCAGGAAGGAGGC end 2 ac124347.4 83129-83691/85081 antisense overlapping gene, also present in Rattus - start 1 TAGGTGGCCCAATTCAGTCCCTGTGACACCCCTCCCCCTAAGTGCTATTAGTCCCACTTTGCTTCTACTG GCTAAAACTGAAAAACTCTGCCTTCGACCCCAGGCCCTGCTGAGATTTCCCCCTAGGAGGCTAGAGCTGG GTTCTTTCGAGGCAGCTCTCAGCAGACCCGCACATGGGGGGTGTCCCCAGCGCAGGGCCAAGGATGAGGG CACTCACCTCTGGGAAGGCCCCTTTGGCGAAGACCATCATCAGTGACGTCTTCCCGCAGCCCCCGTCGCC CACCAGGACCACCTTGACCGAGTGCCCGCTCTGCGGCGCCTCTTCTCCCGCAACCTGGGACGCGTTCATC CCTGGCTGGCGGACGGCGGTGCGCGGAGCAGCAGGCG ac124347.4 (91986-91600) - start 2 CCGCCCAAGGGTGGACGCTCCTGGGGTCCGGTCTCCTGGCGTCCTGTCTAGACACTCAAGAAAGACTTTT GCAGCACCTACTGCGTGCAGTCGCTGAGGCCGCAGGG ac124347.4 (91425-91319) - TTGCAGAAACTGAGGCCCCGAGAGTACAGTGACTTCTCATACTGCAG ac124347.4 (87247-87201) - GCAGAGAGGTGGCTCAGGCAGGAGACGGAGGAGAAG ac124347.4 (86986-86951) - start 3 previous exon joined to alt. pickup CTGGCCTGGAGGGACGCGAGCCAACACTGGTGTCTGTGGAATCTGTGCTGATTTGCTTTGGATCCACACA AGGATCTGGACCTGGGCCACTGGGGACTTCTGGTTCCCTCAGAGTGGATGGTCAGGGGAGCCTTCATACG GCCTACTGGCTTCTGTTGGGCCTGGTCTCCTGGCCTCTTCTTGTGTCCACTGTAGTGGGCAGAGTCTGTG TTTGGGATGGGGTAGTTTGTGTCTCTTCTATTGTGTGACTGCTCACCATGATCCCCACGACCCCCATGGT AAAGATGGGATGCTATTTTTTCTCTCACCCTCAAAGTGAAACTCCTTCCCTGTCTGAGAGAGCCTCGCTG TTACCCCACCCCTCAGGGCTCCTTCCCAAGTTCATCTGCCCGGGTTGTTACTCGGTGCCAGCATGAGAGA GGGCATCTTGGGTTCCTGGCATCCTGAGTGCTATGTCTTGTTAATATTAGCCTTGCCACCACAG]GAACT ATCCCCTCAAGATTTATTAACAGCTGTCCTCTAGGAGAATGGCAGAAGGGGAGTTGGCAAGTTCTGAAGC CCACATCCTTCTGCAGGCCAAGGGACATACTTCCTAAGGCTCTTCAATACAGTAG ac124347.4 (84176/83692-83563) - TCTGGACAGAGGATCCAAGATGGCTGATGAGAAATCCCCCAGGAGGTGGGGCAGCCCTGGTGTTCACAGC TCCAGCTGGCTATGGAGAGGGCATCGCTGGATAGAACTGAGATGGTGCCAGGCTCCTGAGGCTCTGATGC CCAACCTGGCCTGCTCTGGCTGTTAGTTTCGCCGGACTGGATGCCACATGGACACAGGCCTGCGTAGTGT GGCCAGCATCTGGTTCCAATGTGTGGTGCCCATGCCACTGACCCCTGGCCCAATGATGACATGGCCCACG TTGTCCCCACGGCCGTCGCTGCTGCTCTCAGCCACTGTCACCCGGAGAGACAGGTCCTGGGAAGAAGGTG ACATGAAAGATTGGGACCAGGAGCAGCTAAAGGGTTCTCCCTGGCTCCAAGGCTCCAAGGCCCTGTGAGG TGCATACAGCTATTTGAATCTTCCCATCTGGCTTGGGAGGAGAGACTTGTCCTAGTTACTTCCAGATGGA TAAGCCAGCTATGATGTGACCTCGCTAAGTGCTAAAAAGTGACAGTCCCAGCAGGATTCAAAATCCATCT CTCAGTTCTCTGTCCCTCGACATTTTTTTCTTTAAGATTTATTTTTGAGTTTGAAAAGATGGGTCAGCAA TTAAACACACTTGCTGTTCTTGCAGAGAACCTTGGTTTGAGTCCCAGCATCTGTACATCGACTCAGTCAC CTGAGGCTATCTGAACTCTCTCTGTGGGCGTCTGGCATGCATGTTATGCACATACATACATGCAAGCAAA ATGCTCAAACACTTAAAATAATAAAAACCTTCAAAAGATTTTATTGTAAAATATGTATATCTGTAATGGG ACATACTCACATACATGGGCACGTGAGTATAAAAGGCCAGAAGAGAGCACTGGACCCTCTGGAGTTGAGA TTCTAAGCAGTTGTGAACCATCTGATGTAGGTGCTGGGAACTGAACTTGGGTCCTTTGCTAGAGAAGTAT GTCTCTTAACCACTGAGCCGTATCTCCATCCCTGCTTGTTCTTTTTTTTTTAATTTAAAAAAAAAGATTT TATTTATTTATTTTATATATGATGAGTACACTGTCACTCTTTTCAGACACCCTAGAAAAGGGGGGCATCA GATCCCATTACAGATGGTTGTGAGCCACATGGTTGCTGGGAATTGACCTCAGGACCTCTGAAAGAGCAGT CAGTGCTCTCAACCTCTGAGTCATCTCTCCAGCCCTACCCACCCCCCCAGTTGTTCTTGAGATACATAGT CTAGGCTGGCTTTGAACTTGCTGTGTAGCTGAGTCTATACGTGGATTCCTGATCTTCCTGCCTTGACATC TTAAGTACTAAAGTAACAAGTGCATGCCACTATATCAGGCTTAGAACTCAGGCTGTTAGATTGTTTGTTT GTTTGTTTGTTTGTTTGTTTGTTTTGGTTTAAAAAAAAGATTTTTAATG ac124347.4 (83464-82016) Sense overlapping gene (Arhd) encoding RhoD CGCCGGGCCAGCCCCGCGCCCGCCGCAGCCAGCCCGCCGCGTACCGCCTGCTGCTCCGCGCACCGCCG TCCGCCAGCCAGGGATGAACGCGTCCCAGGTTGCGGGAGAAGAGGCGCCGCAGAGCGGGCACTCGGTC *** AAGGTGGTCCTGGTGGGCGACGGGGGCTGCGGGAAGACGTCACTGATGATGGTCTTCGCCAAAGGGGC CTTCCCAGAG ac124347.4 91556-91769 phase 0 - AGCTACAGTCCCACAGTGTTTGAGCGCTATAATGCCACTCTGCAGATGAAGGGTAAACCTGTGCACCT CCAAATCTGGGACACAGCCG ac124347.4 98134-98221 phase +1 - GGCAAGATGACTATGACCGCCTCCGGCCCTTGTTCTATCCTGATGCCAATGTCTTGCTCCTCTGCTTC GATGTGACCAATCCAAACAGCTTTGACAACGTCTCCAACCGG ac124347.4 98825-98934 phase 0 - TGGTACCCAGAGGTGACACATTTCTGCAAGGGAGTGCCCATCATTGTTGTGGGCTGCAAGATAGACCT GCGTAAGGACAAGGTGCTGGTGAACAACCTGCGGAAGAAAAGACTGGAGCCCGTGACCTACCACAGG ac124347.4 104228-104362 phase 0 - GGCCACGATATGGCAAGGTCTGTGGGAGCGGTGGCCTATCTTGAGTGTTCAGCTCGGCTCCATGACAA CGTGGAAGCCGTCTTCCAGGAAGCAGCAGAAGTGGCTCTCAGCAGTCGCAGACATAACTTTTGGCGGC GGATTACTCAGAATTGTTGCTTGGCCACCTGACTGGCTTGGAACCCACCTTGCCTTCCGGTTTACTCC *** GCTGCAGAAAGACCCAGAAGCAGAACTTGTACTCTGTTGACTGGGATGGACCTAATCCCTAGGCTGAG CTGGTAGAACCACACATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCT GGATTGAGGAAGAGGGTTCCCAGACCCTTAGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGG ACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCGCCACCTTGTGGCTATTCTATTGAGTTATA TCTACAGGACCTAGGGTTCCCAAGACCATCTTGCCCGGGCTAATACCCTGCCCCGTCCGTGATCATCC TATTTATCCCATTGCTAAGTGTAACAACTAAAATGGCAGCACTTGCTATTAGTGTCCTGACTCTTCCT TCAAAGCATCTTTACATACTACTAGGTAGGAAAGAGCCCATCCACCTAGACCCTAGGGTGGAACTGCT AGGACCAAACCTGACTTTATCACTTTAAGACCTTGAGGAAGTTCTAGGCCTCAGCCTTTCATCTGTAA AATGGCCAATCAGAAATTACATCAAGCATGAATAAAAGTCATGAGGACTAAC ac124347.4 104733-105532 -------------------------------------------------------------------------------- 64. Mus syt11 (syt12) Mmsyt11 Abundance high Chromosome 3 Size unknown (draft) Transcript complexity affecting Nterm and C2B MAEITNIRPSF^ DVSPVAAGLIGASVLVVCVSVTVFVWTCCHQQAEKKHKTPPYKFIHMLKGISI - alt.Nterm YPETLSNKKKIIKVRRDKDGPRRESGRGNLLINAESGLLSHDKDPRGPSPASCMDQLPIK RDYGEELRSPMTSLTPGESKATSPSSPEEDVMLGSLTFSVDYNFPKKALVVTIQEAHGLP VMDDQTQGSDPYIKMTILPDKRHRVKTRVLRKTLDPVFDETFTFYGIPYSQLQDLVLHFL VLSFDRFSRDDVIGEVMVPLAGVDPSTGKVQLTRDIIKRNIQ^ KCISRGELQVSLSYQPVAQRMTVVVLKARHLPKMDITGLS[G^ earlier pickup rare (D)/NPYVKVNVYYGRKRIAKKKTHVKKCTLNPVFNESFIYDIPTDLLPDISIEFLVIDFDRTTK NEVVGRLILGAHSVTTSGAEHWREVCESPRKPIAKWHSLSEY - start 1 This exon (repeat sequence) is also present in non-msyt12 transcripts arising from a number of loci. This exon is not repeated in Homo. GGAGTCTTCTGCCAAGGGCCTTTCAGAAGAGGCGGAGCCTATCTCTCATCAGGACCAGTCTGACTGCACC TGCATCCTTAGCTCAGAGCATCCCTGGAGCATCTAAGAGGAAAGCGCAGCTAGCAACCAGGGATCGTACT GCAGGGGCAATCGGTCATGCACCTTCCCCTCCCCTGATCTGGAGGTCTACAGCCGCGGCCTCG[GTACTGA CCGAGATTCCCAAAGTTGTCTGACCTCTGCAAAAGTGTTTCTATCAACAGCCTCTGATTACAACATGGCT *** GAGATCACAAATATACGCCCCAGCTTTG ac127377.2 (138454-138252/138147) phase= +1 - Start 2 (rare) GGGCGATCAGTGCCGTTGCAATGCCAGATAGCTGAGGAATGGGCGGGGAGTGAAGTCCAAATGGGACCCT CTCATTGCCAGCCCAGCCAGAATAGGGCCTGAGGTCATGAGTAGAAGGCTGTGGAGAACCTCTGAATTTC AGCTGTGGGATGCAGGCTCTGGCAAGGGCAGAGTGCCACCGAGGATAGGCAGGTCCAGGACGCTAAAACC TTGATGGTAAACCCTTGATGGTGCACTGTCAGCACGTCTGGAG ac127377.2 (138118-137866) - ATGTGTCACCGGTAGCGGCTGGCCTCATCGGGGCCTCCGTGCTGGTGGTGTGTGTTTCAGTGACTGTCTT TGTGTGGACGTGCTGCCACCAGCAGGCAGAGAAGAAGCACAAGACCCCGCCATACAAGTTCATTCATATG *** CTGAAAGGCATTAGCATCTACCCAGAGACCCTCAGCAACAAGAAGAAAATCATCAAAGTTCGGAGAGACA AAGATGGCCCTCGGAGGGAAAGTGGACGAGGGAACCTGTTAATAAACGCGGAGTCTGGCCTGCTGAGCCA CGACAAGGATCCCAGAGGGCCTAGCCCTGCATCTTGTATGGACCAGTTACCCATCAAAAGAGACTATGGG GAAGAACTGAGGAGCCCCATGACAAGCCTGACCCCTGGTGAGAGCAAAGCCACCTCCCCATCCTCGCCAG AGGAAGACGTGATGTTAGGCTCTCTTACCTTCTCCGTGGACTACAACTTTCCCAAGAAAGCTCTGGTGGT GACAATCCAAGAGGCTCACGGGCTGCCAGTGATGGATGACCAGACCCAGGGCTCCGATCCCTACATCAAA ATGACCATTCTCCCGGACAAGCGGCATCGAGTGAAGACCCGAGTGCTTCGCAAGACGCTGGACCCGGTGT TCGATGAGACCTTCACCTTCTACGGCATCCCGTACAGCCAGCTGCAGGACCTGGTGCTGCATTTCCTGGT GCTCAGCTTTGATCGATTCTCTCGGGATGACGTCATCGGAGAGGTCATGGTGCCATTGGCTGGAGTGGAC CCCAGCACAGGCAAGGTTCAGCTGACCAGGGACATCATCAAGAGGAACATTCAG caaa01070826.1 (1971-1148) phase 0 - start 3 (cb522323 only) TTTTTTTTTTTTTTTTTGGTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACT TTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGC GTGTGCCACCACCGCCCGGCCCACGTGGCTTTCTTAAGAGCCATTACTGTAAAACTCAGGGAGAAAGAGT CCTTTCTGGGGCCCATTTCCT join to # below ac134246.2 (29744-29514) - AAGTGCATTAGCAGAGGGGAACTCCAGGTATCTCTGTCATACCAGCCCGTCGCACAGAGAATGACAGTGG TGGTCCTCAAAGCCAGACACTTGCCGAAGATGGATATCACCGGTCTCTCAG[GTA earlier alt.pickup rare, but the commonly used intron donor is the atypical gc ac134246.2 27382-27502/27505 phase= +1 - ATCCTTATGTCAAGGTGAACGTCTACTACGGCAGAAAACGCATTGCCAAGAAGAAAACCCATGTAAAGAA GTGCACTTTGAACCCCGTCTTCAATGAGTCGTTCATCTATGACATCCCCACCGACCTTCTGCCTGATATC AGCATCGAGTTCCTTGTCATTGACTTCGATCGCACTACTAAGAATGAGGTGGTAGGGAGGCTGATCTTGG GGGCACACAGTGTCACAACCAGTGGTGCGGAACACTGGAGAGAGGTCTGCGAGAGTCCCCGCAAGCCCAT AGCCAAGTGGCACAGTCTGAGCGAGTACTAACCCTGGGGCCAGGTGGGGAGGCACATGGCGGGGAGAGGT *** GACAGAGAAGCTGACTCAAAACCTCATTTTAGTCGTAGAAGAAGATTTCTTACAGAACAAACCACACGAA GAACCTCACACTCCACACAGCTGCAGATTGGTTCTTAGCGTGAGGATTGCTTTCTTCTTTGCAAGGCACT AGACGATCTTTTGTTTTTAAAAATGAGGGGG#GAAGAGAAGGAAAGACCCCAAGTCTATATATAACAATGT AACCTTATACTTGCATGTCTAATACAAACAAGAAATTAGCCTAACCAATATCAAGTTGCAGATTTTAATC CATGAAAATTGTGTTTTGTGCCGAATTGTATTTGCTGATCCCCTGAAATTGGCCTCTCTTTATCAGGCTT CTCTGGGTTATTCCAGTCCCCCATCACTGCAGGAGAAAAGTCTGCCCTTGTAAAGCCCCGCGTTCCCGTC ATCCAGTCCTTTTTTCTGTCACCTCTCACATCTCTGCTCTTTGGCTGAGTTCCAAATCCTGAGGTCTGTA GTAAGCAAAGAAAAGAGTTGGGTTTCCAGGAAAAAGAGTAATTGAGAATGGGGTGTGTGCTGTAAAAGGC TAACAGGCAGCCAGTGACTAGAGATATCCCCGTGAGCACAGGAGAGGTGGGGCTGGACTTAGGACTCACT AGCTGATTTCTCTAGTTGCTATGGAGATATCACCTGGGGAGGGACCTGTGAGCACAGCATATCCTGAATG CGACTTGCAGGTCAGGGGACAGAGGAGGAAATAAGATGCCCACGTGGCCCTCTGTGGTAGGCTCTTCATC GGTGGTCAGCAGTGCTAGGTTTGAAAGGTTACACTGGCTTTTACTTTTCCAGAGCTGCTTCTGAAGCTCT GGTGTCTCCACATTATGTAGCTGCCAACACAGGTTGCTTTCTGTCTCTTAAGGAAATGGGCCCCAGAAAG GACTCTTTCTCCCTGAGTTTTACAGTAATGGCTCTTAAGAAAGCCACGTGGGCCGGGCGGTGGTGGCACA CGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA AAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAACCAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAGAAGAAAGCCACGTGGGGCTGAGTAGTAAGATCATGTGAATGCCTTGAGA GCCCCACTCTCCTCAGCAGAAGCGCACGGCTGGAGAACTGGGAGTCTCCCCACACGGTGAAGGGTGGAAA CCAAAGTTTCACCATCTCTCTGCCACTGCACAACACAGTGCAGAGCTTGCACACTGTGCTGCAGTTCAGA TCCAGGTCTCCACATGGAGGCTTTGGGAACGAGGGGTGAGAGTGGATGGGCAGTGCCGACTTTGACAGCC TGAAGAGGATCTCAGTCAGATGAGAAACAGCTTGATCCAGGGCCTGAAAGATTAGCTGTAACTGAAGTGC CCACGTCCCTAAAGACCGTCACTTTCTAGCTTGCTTCTGAGAAGGGGTGGACCAGCTGACTTTCCATGGA GAGGGTTGGTGACAATGCCTTTGGTGGTTCCCCTCGTGCTTGTAGATCTGAATCCACTCTGCCCCCCTGC AACCTTTCATTTGCTTTTTGTTTGGTTGGTTTTGCTTTTGCTTCTGTTTTTGTTTGTTTTTGTTTTCTGC CGACTCTTGGCAAGGCAGAGCAGTGCTGTACAGGCAGGCAGCCCCACTGTGCTCTTGCTACTGATAGCTC TTCCATCCCATCATCTGACTCAGTGTCTCGCCATCAGCTGGGATCACACCACTAGTCCCTGTCCTTTAAC CCATGGAATGTAAATATTGTATCATACGTAGAAGAAAATACTTTTTGTTTTCTAAAAAGGCATTTTGACA TAGTTTAATGAAAACCCGGCAGGAGCATTCTAAGCCCCATTAGGG ac134246.2 28274/28795-30558 -------------------------------------------------------------------------------- 65. Mus syt13 Mmsyt13 Abundance high Chromosome 2 Size >40 Kb Transcript complexity affecting 3' ends MVLSVPVIALGATLGTATSILALCGVTCLCRHMHPKKGLLPRDREPDPEKARPGVLQAAQQ^ FNIKKSTEPVQPRPLLKFPDIYGPRPAVTAPEVINYADYTLETTEESAAPASPQAQSDSRL KRQVTEELSIRPQN^ GVVEDVCVMETWNPEKAASWNQAPKLHFRLDYDQKKAELFVTSLE^ AVTSDHEGGCDCYIQGSVAVKTGSVEAQTALKKRQLHTTWEEGLALPLGEEELPTATLTLTL RTCDRFSRHSVIGELRLGLDGASVPLGAAQWGELKTTAK^ EPSAGAGEVLLSISYLPAANRLLVVLIKAKNLHSNQSKELLGK^ DVSVKVTLKHQAQKLKKKQTKRAKHKINPVWNEMIMFELPDDLLRASSVELEVLGQGEEGPS CELGHCSLGLHASGSERSHWEEMLKNPRRQIAMWHQLHL - GACGTCCTTACAGCCATCCTTCCTCCCAGCTGGCTGCGTCCCCGCCCTCGGAGTCTAGAGAGCGGCTGGA GCCAGGCGGGAGCGCGAGGTGCAGGAGGCCGGCGGGAGGCGGGCGAGCCGCGGGAAGCAGGCACCATGGT *** GCTGTCGGTGCCTGTGATCGCGCTGGGCGCCACGCTGGGCACTGCCACCAGCATCCTTGCGCTGTGCGGG GTCACTTGCCTGTGCCGACACATGCACCCCAAGAAGGGGTTGCTGCCGCGGGACCGTGAGCCCGACCCGG AGAAGGCAAGGCCCGGTGTGCTTCAGGCGGCCCAACAG al844903.11 102937-103254 phase 0 - TTCAACATTAAAAAGTCCACGGAGCCTGTCCAGCCCCGACCTCTCCTTAAGTTCCCGGACATCTATGGTC CCCGGCCAGCCGTGACGGCCCCAGAAGTCATCAACTACGCAGACTACACCTTGGAGACCACAGAGGAGTC TGCTGCACCTGCCAGCCCCCA#GGCCCAGAGTGACAGTCGCCTCAAGAGGCAGGTCACAGAGGAGCTGTCC ATCCGTCCTCAGAACG # join to below # in by247647 only al713913.10 6787-6947/7012 phase +1 - GTGTAGTTGAGGATGTCTGTGTCATGGAGACCTGGAACCCAGAGAAGGCTGCCAGCTGGAACCAGGCCCC CAAACTCCACTTCCGCCTGGACTATGACCAGAAGAAGGCTGAGTTATTTGTGACAAGCCTGGAAG al713913.10 9086-9220 phase +1 - CTGTCACCAGTGACCATGAAGGAGGCTGTGACTGTTACATCCAAGGCAGCGTGGCTGTCAAGACCGGCTC TGTGGAGGCACAGACAGCTCTGAAGAAGCGGCAGCTGCACACAACCTGGGAGGAGGGCCTGGCCCTGCCC CTGGGTGAGGAAGAGCTCCCCACAGCTACCCTGACACTCACCCTGCGCACCTGTGACCGCTTCTCCCGCC ATAGTGTGATTGGGGAACTCCGCCTGGGCCTGGATGGAGCATCTGTACCCCTGGGGGCAGCACAGTGGGG TGAGCTGAAGACCACAGCAAAG al713913.10 11948-12249 phase 0 - GAGCCATCTGCAGGGGCCGGGGAGGTCCTTCTGTCAATCAGCTACCTCCCAGCTGCCAATCGCCTCCTGG TGGTGCTGATTAAAGCTAAGAACCTCCACTCCAACCAATCCAAGGAGCTGCTGGGCAAGG al713913.10 17336-17465 phase +1 - ATGTGTCTGTCAAGGTGACCTTGAAACACCAGGCTCAGAAGCTGAAGAAGAAACAGACAAAACGGGCCAA GCACAAGATCAACCCCGTGTGGAACGAGATGATCATGTTTGAGCTACCGGATGACTTGCTGCGGGCATCC AGTGTGGAGCTGGAGGTGCTGGGCCAGGGCGAGGAGGGGCCGAGCTGCGAGCTGGGCCACTGCAGCCTAG GCCTGCATGCCTCGGGCTCTGAGCGCAGCCACTGGGAGGAGATGCTAAAAAACCCACGCCGGCAGATCGC CATGTGGCACCAACTGCACCTGTAGTCGGCCACCTGCCACCGGCCACTGACCGTCTTTCTTGGACACAGT *** CATCTTCCAGGCTCAGCTGTCAGTCATCCCTCGTGCTCTGTCCACATGCCTATACCCAAAGACAGATGCA GACGTGTTGGCTGAGGCCAAGACCTCATTCCTCTCTTACTGTATTCCCAATACTAAAAAGTGAGCGGTGG CGCCAGGACAGTGAGTGGGACTGGCACTCAGAAGACTGTATCATGCTCATCTGTGTTATGGAAAAAGATA TGTGCCAGGTACCCTCAGTCGGCAGCCCCTGCTCACATTGAGCTGAAGCAGTGGTTCTTAACCTGTGTAT CACAACCCTCTATCTCCAAAAAATATTTACATTATGATTCATAACAGTAGCAAAATTACAGTTACAAAGT AGCAATGAGAACAATTCTGTGGTTGGAGATCACCAAAACACAAGAAACTTTCTTATAGGGTCACAGCACT AGGAAGGTTGAGAATCACTGGCTGGCCAGCAGGTCTCTGGGCCA#CTGGGGGGTCATGCCACACTGATGTT CCGGTGGAATACACAAGCCTCTGTCCTTAGCTAGCACAGGGGTTCTGGAGCAGAGCAGGAGGGGCTGCGC TTGATAAGATCCCTTCTCCCCTATCCAGGCAGCCTTTCCTCTTGATCTCCGGGGGCCCAGCACCAGGACA GTGTGAAGGCAGGAACTCTCTGCTTACTTTATTTCTTCTTTTTTATATTTCTGCTGTTCATATTCCACTC TCGAGCTACATTGTGTGTTTTGACTGTTTTATTTAAGGGATTGGAGTGGGTTGTGTTTGTTTTTTTTTTA TCACACGTAGAGTGCCCGTTCCCTGGCAGGCCTAGGTTGCCACTCCTCTGGAGTGTCTGCGGCATTCTGA GGACAGCTGTCATGTCACCCCCCCCCACCCCCAAGCTGACTCCATGTGACAGACCTGTTCTTCTCAGTAT GCCTGTACTTCAGGACGAAGTAGCTCTGAGCTTGGCTTGTTCCATCTGGCTATGTAAATGAGGAGGTAGA TGAACTTTAAAGAGAAAACGTGGTCTCTTGATAACATGCCTCCCTCCAGTTTGGGGGACATGTCCTTTAA CTTGGAAATAACAAAAAGCTAGGTTTGATTGCCCCTGTTGATATTTCCAATAGATGCCCCACTAGGAATC AAATAAGTAGCTAGCTGCAGGGGTAGATACTTGTGAGCCGGAATTCGAGTTGTCATTACTTCCTTGCTCC ACAGCGCCTCAGTGTGGCCACCTATAGCACAGCACCAATGTCATGGGAGCTTGCCAGTCCAGCTTCAGGA GGTAAGCAAGAGGCATCTTAGCGGGCATCAATTGTTACTGGTCAGTTGGTGGCACTTCCTGGCTCCTCCG TTGGCTGTGCTTCTTCTCCAAAACCTCCTCTGTAAATTGCTCAGAGATGTTAGACTGGGAACCAAAAACT TTCAGTCACCTTTTACATCGGCTTAATCTGTTTCCAGCCATTCCTGTAAGTCACCTCCGAATCAGCTTGG GAAGGAACCTCTCTATGTCTTTGCCAGGGAGTGATTTCTGGAAAGAGGTGGAAATAAAGTGAGAGGCCAT TCCAGGCTGGGCTACTGCTGGGAGGTTAGGAGTTCACCCCAGTCCTCTGTGAATCCTCTCCCCAGGACAA CTAGGCATCTATTTGTTGAGTGTTTGTCCACCAAGACCGTGCATGTGTCTGTCCATTCTGATTAGAGAAG GCTCTGGGGGCGAGTGAGTAGCTTATCACCTTAACGGAAACATCAGATAAGAGGAGTCCGGGACTGCTGT TCAGGCGGGCAGCTCTCAGATGTAAAGGGGCCCCGGGGGAAGGGGCAGTGTCTGGCCTGAACTGAGGTGG GAATCTTTGGAGGAGAAAGTTGGTCCTGTGCAGTGTTTCTACCCTTGCTGTTTCCTGTTGTTAGATGCTG CGTGTTTGTGATGCCATTCCACATAAAAGCACAAAAAGTCGCATGAGACATCGTGGTCACATGTCTGGTT ACACTTTGGAGCACAAAATCTTACAGTGGTAAATAAATCGTTTTCCAATCG end 1 GGTTGGCAGCCCAGTGTTTCTCTTTGTTCCTTTACATTAATATTTTAGATGTATAAAATTCAGAAAAAAA ATCTCGTGTATCAAACACCCATGAACCTCTGCCAACTTCAATAAACCTTGACGACC end 2 ACAGTTGAATTTTCTTCTTGTGCCCTATACTGAGAAGACCAGGATCTTACATTCTGATTTGTTATTCTGAG CCTTCCTTTATATTTTTACTAAATGATCATTTGATCCCT end 3 GAGCACTAGTGAGTATTTGTGTGTTTCCAAGTTTTACTTCAATTCTTAAATTGCATCACACATTTTTTTTC AACATTAAAAATTTAAGCTTT Most transcripts stop at end 1 and more stop at end 2 than end 3 One transcript continues beyond end 3 al713913.10 19397/20211-21757/21883/21993/22085 -------------------------------------------------------------------------------- 66. Mus syt14 Mmsyt14 Abundance low Chromosome 1 Size large (draft) MAIE^ GGERTCGVHELICIRK^ VSPEAVGFLSAVGVFIVLMLLLFLYINKKFCFENVGGFPDLGSGYNTRTNSQDKM^ YNSYMDRDEPGSSSESEDEALGKYHEALSRTHNSRWPLVDSRQKSYAWETRQKYSPLSA EYDGYSTEASMED^ GNCIQRMRRTPPLDELQPPPYQDDSGSPHLSCTPSEIGDAKCEISHCSNSPRCSFNKCPSEGSTGH EAESYHNKGYEDDVPSDSTAVLSPE^ DMSAQGSSSQLPKPFDPEPEAKYGTLDVTFDYDSERQKLLVTVTAVTDIPTYNRTGGNSWQVHLVLLPIKKQRAKT SIQRGPCPVFTETFKFNHVESEMIGNYAVRFRLYGVHRMKKEKIVGEKIFYLTKLNLQGKMSLPVILEPSYNPS^ GCDSQVSLSEASCGDSTSSCQSLQHGSVPEILIGLLYNATTGRLSAEVIKGSHFKNLAANRPP^ NTYVKLTLLNSMGQEMSKCKTSTRRGQPNPVYKETFVFQVALFQLSDVTLILSVYNRRSMKRKEMIG WISLGLNSSGEEELRHWTAMKESKGQQVCRWHALLES - GCCCCGCCCCAGCTCCTGGAGGCCCAGCTGCCTGGCCCCGGGGCGTTCCCGCCCCTCTGGCCCGAGGCCT AAGAAGAGCAAGCTCCAGCACTTACCCCCGCTCTCCCTGCGTGGTTGGTGCGGTCCATGGCGAGCGCATC ATGGCGATCGAAG *** al365322.10 198314-198466 phase +1 - GTGGAGAGAGAACCTGTGGAGTACATGAACTTATCTGTATTAGAAAAG al365322.10 207072-207119 phase +1 - expressed in Homo but no evidence for Mus [AATCTGGATGCTGGGTGCCTTGGGTCTAAAATTGGCTTCTGTTCTGTTACTGTACCCCAGCAGAGAGAGA TAAGCAATTGGTTGAAATTGAAGTTGGGAATGTTTACAGAGATCACACAACCCCAAGACACTAACAACTG CCTGTGCTTCCTTAGAAGGATCTGCCTGGTAACTTGGCAGCTCAGCAAGATGGTCCAGGT] al365322.10 207412-207611 - TCTCTCCAGAGGCGGTTGGATTTTTGTCAGCAGTTGGGGTGTTTATTGTCTTGATGCTGCTCCTTTTTCT CTATATTAATAAGAAGTTCTGTTTTGAAAATGTTGGAGGGTTTCCAGATCTTGGTTCAGGATACAATACA CGGACGAATTCACAAGATAAAATGT al365322.10 247207-247371 phase +1 - ATAATTCTTACATGGACAGAGATGAGCCTGGTTCATCCTCTGAAAGTGAAGATGAAGCACTGGGTAAATA TCACGAGGCCTTATCCAGAACACACAATTCCAGATGGCCATTGGTAGATTCTAGACAAAAGAGCTATGCC TGGGAAACAAGGCAGAAGTACAGCCCCCTGTCTGCAGAGTACGACGGGTACAGCACTGAGGCATCCATGG AGGACG al365322.10 253528-253743 phase +1 - GAAACTGCATTCAGAGAATGAGGAGGACACCTCCGCTGGATGAGCTGCAGCCGCCGCCTTACCAAGACGA CAGCGGTTCTCCTCACCTCTCATGCACACCTTCCGAAATTGGGGATGCCAAGTGTGAGATTTCCCACTGC AGCAATAGCCCAAGGTGTTCTTTCAACAAGTGCCCCAGTGAAGGAAGCACGGGTCACGAGGCCGAGAGCT ATCACAATAAAGGATATGAAGATGATGTACCTAGCGACAGCACAGCAGTCCTTAGCCCTGAA al365329.7 41317-41588 phase 0 - GACATGTCAGCTCAAGGATCCTCCTCACAGCTTCCTAAACCTTTTGATCCAGAGCCAGAAGCTAAATATG GCACATTGGATGTGACTTTCGACTATGACTCTGAAAGACAGAAGCTCCTGGTAACGGTGACAGCTGTCAC AGACATTCCAACATATAACAGGACAGGTGGCAACTCGTGGCAGGTACACCTTGTTCTTCTACCTATAAAA AAACAGAGAGCCAAAACCAGCATCCAGAGAGGACCATGCCCTGTCTTCACAGAAACATTCAAATTTAACC ACGTTGAATCCGAGATGATTGGAAACTATGCAGTTAGGTTTAGACTATATGGTGTCCATCGCATGAAGAA AGAAAAGATTGTGGGGGAAAAGATTTTTTATTTAACAAAGTTGAATCTTCAAGGGAAAATGTCGTTACCG GTGATACTGGAACCTTCATACAATCCTTCT al365329.7 43775-44224 phase 0 - note that the whole region from al365329.7 41317-44640 is present in transcripts - GGCTGTGACTCTCAGGTGAGCTTGTCTGAGGCATCCTGTGGTGACAGTACATCCTCCTGTCAGTCTCTTC AACATGGCTCTGTTCCAGAAATCCTCATTGGGCTCCTTTACAATGCCACCACTGGAAGACTATCAGCAGA AGTGATCAAAGGCAGCCACTTCAAAAACCTGGCAGCAAACAGACCACCCA al365326.14 11438-11627 phase +1 - expressed in Homo but no evidence for Mus [CTTTCCACCCCCTGTTGTCAGATGGACTGTTCTGTTGTCTAAAACACTTGATAGGTGGACAGGTTTATAT AATCCGAG] al365326.14 14451-14528 - ATACATATGTTAAGTTAACACTGCTGAATTCCATGGGCCAAGAGATGTCCAAATGCAAGACATCCACCCG CAGAGGGCAGCCAAATCCGGTGTACAAGGAAACTTTTGTTTTTCAAGTGGCCTTGTTTCAGCTTTCTGAC GTGACTCTGATACTGTCTGTGTATAACAGGCGGAGCATGAAAAGGAAGGAGATGATAGGCTGGATTTCCT TAGGTCTAAACAGCTCTGGGGAGGAGGAGCTCAGACACTGGACTGCAATGAAGGAGTCGAAGGGACAGCA AGTGTGCAGGTGGCACGCACTGCTGGAGTCCTGAGGAAGTCGGAAGACGGCTGCAAGCCCAGCACTGCCT *** CAGAGGAGCCGTTCCCTGGAGAGTCCTCTTCAACACCCTACCACAACGCTTCACATCAGCGAGGGACCAT CCAGTGCTGCCTGAGGGGAAGGAAGCTTTGCCTCTGGTAGAGCGAGCTCACATGAGAAACCAAGAAACTT GTGTCCTTAATGCTCAGCAGCCCTCCAGAAATTGAATTGCATACTCTTTATTTGAACTTGATTTTCTTAG TGAAAGAGCTAGGAATTCCGTGGAGATTGTGGCTTTAAACCAGAGTTTCCATTGCAGCACTACATATCAT CACCCACATGCTGTCCATGAGACATCTCTATGGCCAGTCCTTGGGTGGATCTCAGTGAGCACTCCTGTCT CAAGGTGAAAGCTCACTCACACTAATGATACTTTCATTTCAGATATGCTCTCTCTGTGCCTCAGCCTTCA TAGTACTAAGCCAAGTGCAAAATTCCCTGAAGAGTAGTTTAAGGTTGGTTTGTTTGACGTTTGTTTCTTT ACCTCCTTTGTTTTTTCTGATCCAAAGAGACCATGTTCTTATGGTCCCTTGCAAACCTTTATGACTGTCC TGCAGAACTTC al365326.14 15759-16679 -------------------------------------------------------------------------------- 67. Mus syt16 (syt14r) Mmsyt16 Abundance moderate/low Chromosome 12 Size medium (draft) Transcript complexity affecting Nterm MATD^ ITPEAIGFLSAIGVFVVLLAVLLLFINKKLCSENLRGHPYPEQRGKRKHSRDKTGGHTGT^ alt.Nterm MVLTMASQDVQNFFQPLSSWLSRVYEALQQAGDALSASLVL LSKHDSALSDKPEQDLDAAQIQQTYLEDEEQDHDGSPEEASSLFLEEDHFSLSNSDLQDS VQTASPTLGQQAEDSSSVIPPWPSKIPGAPKPQPVLSSIAEEDHHSERQRCGRQHGSGTL EKVNGRKQ^ alt.Nterm MTSKEGGGEGEEIIHN^ VNSFGDDEEPSTSSESDEDVTKQFKISVSRSQSFRSGVSEKGKTTELEQKIKCKRLLCTH QEDSAEGSACE[GIHCSALHCRQGQVN^ DLDRTSQLSYSEILSYEDRPISILPQSPFESRNVRHHGPCRPEMGMVRSLGRPCADGVLETE TAFVSRGFEDSYATHSSSLWSPE^ EQDGTSLQVPHRLLEPISKCGDLDVIFEYRAVTQKLTVTIVRAQGLPDKDRSGVNSWQVHIVLLPSKKQRGKTN IQRGPNPVFKEKVTFTKLEPRDVASCAVRFRLYAARKMTRERMMGEKLFCLSHLHPEGEMKVTLVLEPRSNLS^ - alt.Nterm?? SGESPLSPSVVSHSDSASSTQSLSHGGVPELLVGLSYNATTGRLSVEMIKGSHFRNLAANRAP^ DTYGKLFLLNCVGQEMSRCKTSIRRGQPNPVYKETFVFQVALFQLSDVTLMISIYSRRTMKRKEMIG WVALGQNSSGEEEQEHWEEMKESKGQQTCRWHTLLES - start 1 TCGAGCGCGCGGGGCCTGTCGAGAACGCGCGCGGCCGGGCGCGGCGTGGGTACCCCAGCCGCGGGCGGCC GCCCTGCAACCCCCCGACGCGACCATGGCGACTGACA *** ac138644.3 (99641-99535) phase +1 - TCACTCCTGAAGCCATTGGCTTCCTGTCTGCAATTGGGGTCTTTGTTGTCCTTCTGGCTGTCCTTCTCCT CTTCATCAACAAGAAGCTATGCTCTGAAAACCTAAGAGGGCATCCATACCCGGAGCAACGAGGGAAGAGA AAGCACTCGAGAGACAAGACTGGAGGCCACACAGGAACTG ac138644.3 (68458-68279) phase +1 - by127563 only, not present in Homo, probably not open [CTCTGGGTTTACAAGTATGTGTTGCTATGCATGGCAATCTGGTGGGTACTGAACTCATGACCTCCTGCTT GTGCGGCAAGCTCTT...] ac108771.4 146879-146963 - by251541 only, not present in Homo, not open [ATGACTCAGAACTACCAAAGCTTGCAGGACACTGACTTGAATCTGTGAGAAGAGTAAGGAAAGAGTGAGC TAAAGACTAGAG] ac108771.4 152093-152174 - often skipped, introduces new N.term [CTGAGAAGTGTTGAGAGTGAAATGGTCCCAGCCATTAAGAGACCACCCTGTCAAACACGCTTGCTCTGTT CCCTGCAAAGACCTACTCCATAGACCTTGGTGCAAGAGCCAGCATGCAGCCTGGTTTTACTTACTGCCAA CGGTGCTTACGTACTGCACATGTTTTCTTTATGTATATATTAATAAAGTTTTGCCTGTTATAAAAAAGAG ACCTCCAGTTAGATTTCTCATCGTGCTTGTTCTATATTTCACATAAGTTCAGAGTTCAGGAGGAACGGAA CAAGTGGACTCTGCAGACACGAGGTATTTGATCATGGTGTTGACCATGGCATCTCAGGATGTCCAGAACT *** TCTTCCAGCCTTTGTCTTCCTGGCTTTCCCGAGTTTATGAAGCTCTCCAGCAAGCCGGGGATGCATTATC TGCTTCACTGGTCCTTCTTAGCAAACACGATTCGGCATTGAGTGATAAGCCAGAGCAGGACTTAGATGCT GCCCAGATTCAGCAAACCTACTTGGAAGATGAAGAACAGGACCACGATGGCAGTCCAGAGGAGGCAAGCT CCCTGTTTCTTGAAGAGGACCATTTCTCACTCTCTAATAGTGATCTGCAGGACTCCGTCCAAACGGCAAG CCCCACGCTTGGTCAGCAAGCCGAAGACTCAAGCTCTGTAATACCCCCGTGGCCCAGTAAGATCCCAGGG GCCCCGAAGCCCCAGCCTGTGCTTTCTTCGATCGCCGAGGAAGACCATCACTCTGAGAGGCAGAGATGTG GCCGTCAGCATGGCTCTGGCACTTTAGAAAAGGTTAATGGAAGAAAGCAAG] ac108771.4 153758-154578 phase +1 - start 2 bq443592 only, not present in Homo, introduces new N.term CTTACCCACTTCGCCTCCCATCGGATCTGCTCCCTTCTTGTCTCTCAGAGAAGAGCAGTTGATTTCAGAG TTCTCTTCTGTCTCAGAATCAACGTGGGCTATTTAGGAGTTTTCATAGGACTCCCTCTGCCAACAAGTCA ACTGAATGTAACCCAGTCTCAGCACTGGGACCTTTTCCTGGCTACAAAAGATGGCCAGTTCAGATTTTAT ATTCTCTATAACTAGGAGTCCTCCCTTAGTGTTCGCTAATTCCAGCTGTCTTTCCCCCCACTCTTCCCCT CCATCCCTACAGCACTGTGTCCCCACCCCCACCCCCACCCCCTTCTGCCCCAGTCTGCTTGCAATGCCAG GAACCAGAGACTGGGTACCCTAGAGACTAAGAACCAAACATGACTAGCAAAGAAGGAGGAGGAGAAGGAG AAGAAATTATTCACAATG *** ac108771.4 176814-177251 phase +1 - TTAACAGCTTTGGGGATGATGAAGAGCCATCCACATCTTCTGAGAGTGATGAAGATGTGACTAAGCAATT CAAGATCTCAGTGTCCCGATCCCAGAGTTTTCGTTCAGGAGTATCTGAGAAGGGAAAGACAACAGAGTTG GAGCAGAAAATAAAATGCAAACGTTTGCTGTGTACCCACCAGGAAGACAGCGCTGAAGGGTCTGCTTGTG AAG[GTATTCATTGCAGTGCATTGCATTGCAGGCAAGGGCAGGTCAATG ac108771.4 38419-38631/38676 phase +1 - ATTTGGATCGAACCAGCCAACTTAGTTATTCTGAGATTCTGTCTTATGAAGACCGCCCCATTTCCATTCT CCCACAATCCCCCTTCGAGAGCAGGAACGTCAGGCACCATGGCCCTTGCCGTCCGGAGATGGGCATGGTC CGAAGCCTCGGTCGTCCTTGTGCAGATGGCGTCCTGGAGACGGAGACAGCTTTTGTGAGTCGGGGCTTTG AAGATTCCTATGCCACCCACAGTTCCTCTCTGTGGAGTCCAGAG ac108771.4 (136945-136692) atypical gc intron donor phase 0 - start point in Homo, also present in Mus but no transcript evidence TGAATCTTAAAAGGGAAGGGCATTTATTAGATGTCTCCTATATGTCAAGACTTCTACTTTGCACAGCCTC CCTATGGAGTGG ac108771.4 (133012-132931) - GAGCAGGATGGCACCAGTCTGCAGGTACCACACAGGCTTTTGGAGCCTATCTCAAAATGCGGTGACCTCG ATGTCATCTTTGAATATAGAGCTGTAACCCAGAAGCTCACTGTGACCATTGTGAGAGCACAGGGTCTCCC AGATAAGGACCGAAGTGGTGTCAACTCTTGGCAAGTTCACATAGTGCTGCTGCCCAGCAAGAAACAGAGG GGTAAGACGAACATACAGAGAGGGCCCAACCCTGTCTTCAAGGAAAAGGTCACCTTCACCAAGCTGGAGC CCAGAGATGTGGCTTCCTGTGCTGTCCGCTTCCGCCTGTATGCTGCCCGTAAGATGACCCGGGAGAGAAT GATGGGGGAGAAGCTGTTCTGTCTCAGCCACTTGCACCCAGAAGGGGAAATGAAAGTGACTCTGGTTCTG GAGCCAAGAAGTAATCTGAGC ac108771.4 (131351-130911) phase 0 - AGTGGAGAGTCTCCGCTCAGCCCATCTGTGGTGTCTCACAGTGACAGTGCTTCATCCACGCAGTCACTGT CTCATGGAGGGGTGCCAGAGCTGCTGGTGGGACTGTCCTACAATGCCACAACAGGGCGATTATCTGTGGA AATGATCAAAGGCAGCCATTTCCGCAACCTCGCTGCTAACCGAGCTCCTG ac108771.4 (127979-127790) phase +1 - ACACATATGGAAAACTCTTCCTCCTCAACTGTGTGGGTCAAGAGATGTCCCGCTGCAAGACGTCCATTCG TCGTGGCCAACCCAATCCTGTCTATAAAGAGACCTTTGTCTTCCAGGTGGCCCTCTTCCAGCTCTCGGAC GTCACCTTGATGATTTCCATTTACAGCAGGCGCACTATGAAGCGTAAAGAGATGATCGGCTGGGTCGCTC TGGGCCAGAACAGCAGTGGGGAGGAGGAGCAGGAACACTGGGAGGAAATGAAGGAAAGCAAGGGCCAGCA GACCTGCCGGTGGCATACGCTGTTGGAATCCTAGATTTACCAACAGCATTCCTGTTATGTCAGCCTTGAT *** TATCTGACATGAGTCAGATCATTGGGGGCAGAAGAGCTTTCAAACGGAGAACTAAACTTAGGTCATTCTG TGGCTTGGGACAGTTTCAAAGGTTTGATTTGAGTTTAAATGTTGTCATGAAAGGAAGCCTACATACGCAG TATGGGCAATGGTATCTGGTTGAGACCAGTGGTTATGTCACAATCTGTGCTAATGGGTGGTTGTGTTTTG GTTCGCACTATGTGGTGCAGCTTCTTCCTGCTGTCTCTCTTTGCTGGGAGAATAGCCTGAGATTTCAAAG GAGCTATAAACGTTACTGTTTTCCATCACTGAGGTGTATGAATCAGACTCTTCTCAGTGTTCAAAATTCC AAAACAGAAATGAATCAGATGCTGAGTGCTAAGGAAGGGTGTAACCAATCCGCAATCCTCTGCCACCCCA TTCTCTTTATGAATAATAAAAAAAAGAGCCCTGTTTACTTTAAAAGGTAATCGTTATAAACTTGTGGTGT AAAATAAATTTGTATTCATGAAAAGTCTCTTTCTATCTCAATTAGATATCACGGTTTCTAAAAGAATTGG GTTAGACGAATCATATGGAAGCTGTAAAACAGTTAAAAACTGACTGTTATCTGACCTGTCTCTTTTTGAA TATTTAAGATTTCCAAAAAATCACAGATTTTGTGCTTTCTTACCGAATCGGCACCCAAAGAAGAAGAGGA AAACCTAGAAGATAATTTAAGTCTTGGCTTTCTCGATGTTTCTGAATTTGTCATTCATTTGGATTATACC TTTTCTATAGATAATTGTACTAACTCTCACATGTATTTTTTGTATGTATTTCTGCATGCCAACCACATTC ATCTTTATGCTATGTACCTTGCCAGTAGAACATAGAAAGATGCCTACAATGGATCTCAATAAATACTAAT TTGATTGACTTAAAGGG ac108771.4 (99522-98246) -------------------------------------------------------------------------------- 68. Mus syt15 Mmsyt15 Abundance low Chromosome 14 Size small/medium (draft) Transcript complexity affecting Cterm and 3'ends MA^ EQLAFLIGGIIGGLLLLIGVSCCLWRRFCATFTYEELPETSDPATISYFSRKEDRLYQYSGTPPG^ RLPSVPFVVPPSHQGRDWVPLHGGDWAVAPQDPCPVPEHMACTSSAKP^ GDACEMGSINPELYKSPEDTSETGFPDGCLGRLWFSVEYQQESERLLVGLIKAQQLQVPSETCSTLVKLH LLPDERRFLQSKTKHKICNPQFDENFIFQ^ VSSKSVTQRVLKFSVYHVNKKRKHQLLGQVLFPLKNETLAGDHHRIIWRDLEAKNLE^ PPSEFGDIQFCLSYNDYLSRLTVVVLRAKGLQLQEDRSVV^ SVFVKVSLMNHNKFVKCKRTSAVLGSVNPVYNETFSFKVDTNELDTASLSLVVLQTTEGN[SKAWGMGSRGHGVGATQL alt.Cterm ^KSSPLGRVVVGPYMYTRGKELEHWGEMLRKPKELVKRWHALCRPTEP alt.Cterm if earlier pickup - GAAATTGGGAGTGACAGATCGGGTTGGAAACCTGGACATCTGGCCTTGTGGAACCTGAGTTCCACACAGC TGCTGGGACAACTAGACCGGTAGGTCTGTGCACAGGAGCCAAACCGGGTTGGGGTCTAGAAGGAGGTGCA ACTCAGCTCTCGAAGGACATCAGTGGAAGACCCTGACCGCAGGCTCCGCGCATGCCAGAGCCACCTTGTC CACTGCCAGACGCTGGTGAAGAAGGCTCTGCTCTACCCTCAGTGATGGGAGTGACTCCGTACCTGGCAGG GGCCGCAGGAAGCTGCTCGTGCCTCTGGCAAGGGCCCCTAGGACCTACCCCTCCCGCTTTCCGGACTTGC AGCAGCGCCTCCGAGCCCCTCCCGGGCCAGGGCCAGCACCAGGGCGGGGCGTCGCTGTGACCTGGGGCGC TGGAGCCCTGCCTCCCGGCCACCCCGCATCAGTCTTCACTTTCTGGAGGCTGCAGTGCGGAGACTCTCGG CGCCCGCCTGCCCGGGCCCCGCGCCGCGCTGTCCAGGCAGCAGCCTAAGTCTTAGAGCACGGGAGCCGCG CCGCCCAGGAGCTACCGGATGGCAG *** ac116840.3 (46815-46231) phase +1 - AGCAGCTGGCCTTCCTGATAGGAGGCATCATTGGAGGGCTGCTTCTGCTGATCGGAGTGAGCTGCTGTCT GTGGAGGAGGTTTTGCGCCACCTTCACCTATGAGGAACTGCCAGAGACGTCAGACCCGGCCACCATCTCT TACTTCAGCAGAAAAGAGGACAGGCTCTACCAGTATTCTGGGACCCCACCTGGCAG ac116840.3 (45418-45223) phase +2 - GCTACCAAGTGTACCATTTGTGGTACCCCCTTCTCACCAAGGTCGAGACTGGGTGCCCCTACATGGTGGT GATTGGGCTGTGGCCCCACAGGACCCCTGCCCTGTCCCAGAGCACATGGCCTGCACCTCCAGTGCCAAAC CTG ac116840.3 (44712-44570) phase +1 - GAGATGCATGTGAGATGGGGAGCATCAACCCAGAGCTGTACAAGTCCCCGGAGGACACGAGTGAGACAGG CTTCCCTGATGGCTGCCTGGGCCGGCTGTGGTTCTCGGTGGAGTACCAACAGGAGTCTGAGAGGCTGCTG GTGGGCCTGATCAAGGCCCAGCAACTGCAAGTCCCCTCTGAGACCTGCAGCACCTTGGTGAAGCTCCACC TGCTGCCTGATGAACGGCGCTTCCTCCAGTCCAAGACCAAACACAAAATTTGTAACCCACAGTTTGATGA GAACTTCATCTTCCAG ac116840.3 (43564-43269) phase 0 - GTATCCAGCAAAAGTGTCACCCAGAGAGTGCTGAAGTTCTCCGTGTACCATGTAAACAAGAAGAGGAAGC ACCAGCTCCTGGGACAGGTGCTATTCCCATTGAAGAATGAGACTCTGGCAGGGGACCACCACCGTATCAT CTGGAGAGACCTGGAAGCTAAGAACCTGGAG ac116840.3 (41500-41330) phase 0 - CCCCCCTCGGAGTTTGGTGATATCCAGTTCTGCCTCAGCTACAACGACTACCTGAGCCGCCTGACTGTGG TCGTGCTCCGAGCCAAGGGTCTCCAGCTCCAGGAGGACAGAAGTGTTGTCA ac116840.3 (40395-40275) phase +1 - GTGTGTTTGTCAAGGTGTCTCTGATGAATCACAACAAATTCGTCAAGTGCAAGAGGACTTCGGCTGTACT GGGCTCCGTCAACCCTGTGTACAATGAAACCTTCAGCTTCAAGGTTGACACCAATGAGCTGGACACCGCC AGCCTTAGCCTGGTGGTGCTGCAGACCACAGAAGGGAACA[GTAAGGCCTGGGGAATGGGAAGCAGGGGAC ATGGTGTTGGGGCCACTCAATTGTAGGCAGGACTCAATGGCTACCCTCAAGTGGAGTTGTTCCTGCCTCT *** GATTAAAGAAACTAGCTCTCAGAGAGGCTGGGACACTTGCCCACGGCCACGGAGCTTGCCGTTAGGTAGC CTGGGGCTCGTGGCCAGCCTTAGTCCAGTTGGACTTTGTCTGTAGTACCCTAGAAAGAGGTTCAAGGGTA GTTGCTTCTTCCTCGTTCTGGGTGAATTGTCAGAGATGTCAGGCAGTTGGTTTCCTGTCGTGAGTATTGT GTTCTCTGCCTTTCCTCGTGCCTTCCGAGATGGCTGTTCAAGGTCCTGGATGGGTTATCCTTGCCAGTGG TCCTGCACAACCCATCCACTAGAATTCACCGTCACTAACTACGAAGCAAAGCCACTGGGCCATGGCTGTT CTTGTGCCCGATTTGGGACCTTTCTCCCCAGTGGTAGATGATGGGTGGACATTACTGCCTCATGCTCTTG CCCGGTGTGCAAGGAAGCAATGGAAGAGACCTTCCTCC end 1 ac116840.3 (39406-39227/38669) phase +1 - AGAGCTCCCCCCTGGGCCGCGTGGTAGTGGGCCCCTACATGTACACCCGTGGCAAAGAGCTGGAACACTG GGGGGAGATGCTTCGCAAGCCGAAGGAGCTGGTGAAGCGCTGGCACGCACTCTGCCGCCCCACGGAGCCC TGAGCCATTGTGTCCCCATCAGGATGTGCGACACCACACCGTGGACATCTCTAACATTCAGTGGTGCACT *** GTGGGGCTAGCCTGAGCTCATGGGTGTTCATGTGCAGGAAGGAAAAGGGATACAACCCAGTTTCAGCCAG TATCTGACCAGGAGCCTCTCCCAACCCACCTAACCCCTCCGGATCTGCAGGGCTCCTGATCATCAAGGTC ATGACCTCAAACAGGATCTCAGAGATTGAGAACTGATATGTTTGGTGGAGCACAGCTGCACATGAATGGG AGCACAGCACCAGCTAAGTCTCGCCACCTTGGAAAGCTGGTGGTGGGTTGAGTCCACTGCTGCACTGTTT TTCAAGCTGGGCATTCTGTCTTCCACCCAGTAGAGTGAACTGTGGGCCACTACAGGGAGAGCCCTACTGA GCAGCCCAACCACATACCAGGAGGTCAACGAGGTGGTCGGCACAGCTTGCCACATATCTACTCCCTGGAG CCATATAACCCAATGCAGCCAAATTTGCATGACATCTTGAGCACAGCCATCCTCTTCAGGATGCCACACC TCAAGCCCCACTCCAGGTGATCTCTTGCTGGGTTTCATGGTTACCTGGTTATCAGAATTTGGGCATTCAT TTCCTAACTCTTACTTTGGACAGGTGAATCCATGGGACCATGGTATTGTGCACAAGATCGATGACTGTGA CAAGAGGTATAAACTTCATTAGGTCAGTGGTCCCCAGAATCAAAGTCGCTGTCACCAAATGCCCATTAGT TGATCTAGTGAGCAGCCACTGTGCCTGTTATTTCTCTGTGTGTCTGTACCCTAAGCTGCAGACAGGCAGA CAAGACCATGCACTATACTTAAAGCTGAACTCCCTGCCTGTATCTCTCTTGTCGTCTGCAGTGAAGTGAC GGGAGCGTTATCTGTGCCTCTTTAGGTCCACTTCTAATGGCTATCAGTACGCAAATATCAGTTCTGCCTG ACTGGTCCAAAAGAACACACCATCTTATTTGTTTCTTTCTCTCTTACTTCATGTACATACTTTCAGAGTG ACTCACACTGCAGTGGCTTCCAATAGCTACACACACACACACACACACACACACACACACACACACACAC ACACGGAGATTCTTGAAATAGAACTACAGTGTTTCATCTGGAACCTGGAGGCCATGGATGCCACCACACT CATAGTCCAGCGTGAGACTCGTGATTTGCAGTGGTTTTTCCCTGGATGACCAGGGAAAGTTGGCGGACTG GTACATCTGACAGGCCTCTGAGAAACTGTAATGGCAAGAAATCAGCAGGCAGTGTGCTCTGAGGAGTGAC AGGAGGAGCAGCCATATTGTAGGGACATGTGTAGACTTAGAATGGCAAAGAGGCATGCAGGTTTTCGTGG GCCAGTGTGAGCTCGCAGGGGCTGTCTCAGATCCTGTGACTCTAGAAGAAAGTTTTACAGTCCCACAGAA TATCTTAAAATAAGGTGATCAGTTTCTCAGAAAAGTATACAATTTGATCCAATTTTATTTAACACATACT AATATGAGAACCCTCTGACAAATGTAGGTTATTCAACTTTCAATCCGTTAGCATGATATGTTTATCCACT TGTTTTACTTTTTTGGTTTTTTGTTTGTTTGTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTC CTGAAACTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCT GGGATTAAAGACGTGCGTCACCACCGCCCGGCCACTTGTTTTACTTTTAATAAGAGGGTTTGGGGATTTG TAGGAGACAGAGGGGTCAAGGGCACGACAAGAAAACTTACAGAATCAACTAAGTTGGGCCCATAAGGGCT CACAGAGGGTGAACTACCAACCAGAAAGCCTACATGGGTCTAGCCTAAGGCCTCTGCACATATGATATGG TATAGCTGTGTAACTGGGTCCTTAAGTGGACAGCAGGGGCAGGTGCTGTCTCTGACTCTGTTGCCTGCCT TTTGGTCCCTTTCCTCCCACTGGGCTGTCTTGTCTGGCCTCAACAGGAGAGGATGCACGCAGACCTGCTA CAACTTGATATGCCAGGCTTCCGTGGGAAACCTCCCCTTTTCTGAAGAGAAACTGAGGAGGAGTGAGTGG GAAGGGAGTCGGGGAGGGGACTGGGAAGAGAGGAAAGGAGAAAACTGTCAGATATAAAGTAAATAAATTA ATT end 2 ac116840.3 (38369-35987) -------------------------------------------------------------------------------- 69. Homo syt1 Hssyt1 Abundance high Chromosome 12 Size >588 Kb Transcript complexity affecting 5'UTS, Nterm and pre-C2A MVSESHHEALAAPPVTTVATVLPSNATEPASPGEGKEDAFSK]LKEKFMNELHKIP^ - alt.Nterm LPPWALIAIAIVAVLLVLTCCFCICKKCLFKKKNKKKGKEKGGK]NAINMKDVKDLGKTMKDQ^ - alt.Nterm ALK]DDDAETGLTDGEEKEEPKEEEKLGKLQYSLDYDFQNNQ^ LLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFK^ VPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEE^ QEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLS^ DPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQ^ KVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEEVDAMLAVKK - start1 ATCTCGGCTCCACCGCACCCTTCGCGGGAAGTCCCCAGGCTTCCAGCAAAGCTCAGCTTATCCCGCCCCC GCTTCCAACCCGGAACCCCAGAAGAACAGCATGATGAGCCTCCGGCAGCCAGGTGGGCCACCTCCCCGCG GCTCAGTTTGAGGACACTTGTGCGGAACCCTTTCACATCCCCACCCTACCCAGCTTTCACAACTCCGCCG GGTTAAATGGCCAAAGACAAACTTCTACCTCTCCTGTCCCCGGTCCCAGCTTTTCAAAAACCCACAGCTG GCGAACCCACACACATCGAAACTCCTAGGTCGCTGTTGCAGTCTGGGCATGCTCAGTATCAGG ac073606.19 17865-18207 - start 2, also found on chr 4 CGGCCGCCTCCTCACTGGAGGGATTCCTGGAGAAGCTGCAGTGTGGGGATGCTCTAGACCGAGTACTGCC CCCAGTGTCTTTCCACCTCCTCCTGCAGCAGCGGCAGCGGCAGCAGCAGTTAGCAGCGGCAACTTGAGGC TGCACCCCGGGCAAGTCCCCAGGGTGGTGCTCAGCCGAGAGGGGGGCTTGGCGCCCCGAAGGGGTGTGTG TAGGGTGGGGGCGACCACGTGGGACCAGCTGGTGGCCCTGGAAAACCTCCCACACACCCACACCCACACA CCCCTTTTGTGTTGCAG]GCTGCCCCTCCAAGAGCGGAGGCAGCGAGAGTACGCGTGTGCCTCGCGCCGGT CCACGCGGGGAGAGCACTGGGGACCGAGACCCGGCACCACCTCCCGGTCCGCCCTCCAG ac073606.19 18573/18870-18981 ac022325.5 (169730-169489) chromosome 4 - muliple chromosome locations GGAAAACGGGAAAACTAGCAAGAGCTAGCAAGAACTAGCAAGAGCTTGAACAAACGCCTGGACTCAGATT GGAAGACTGCTCATTTGTCTACTGCCTCATTCCTGGAAATTGCACTGGAACTGTCTGATTAAG ac073606.19 131671-131803 - [AAAAACAGAATAATTCTGAAAGAAAGAAAACAAAGAAAAACATACTCCAGAATTCCTAATAGAACA] ac073616.17 14301-14366 - CTTCACCTGAACCTAAAATGGTGAGCGAGAGTCACCATGAGGCCCTGGCAGCCCCGCCTGTCACCACTGT *** CGCGACTGTTCTGCCAAGCAACGCCACAGAGCCAGCCAGTCCTGGAGAAGGAAAGGAAGATGCATTTTCT AAG]CTGAAGGAGAAGTTTATGAATGAGTTGCATAAAATTCCAT *** second translation start predicted from Rattus transcripts indicating alt. pickup ac073572.19 57576/57719-57758 phase +1 - TGCCACCGTGGGCCTTAATTGCAATAGCCATAGTCGCAGTCCTTTTAGTCCTGACCTGCTGCTTTTGTAT CTGTAAGAAATGTTTGTTCAAAAAGAAAAACAAGAAGAAGGGAAAGGAAAAAGGAGGGAAG]AATGCCATT AACATGAAAGATGTAAAAGACTTAGGGAAGACGATGAAAGATCAG *** third translation start predicted from Rattus transcripts indicating alt. pickup ac078917.14 22733/22864-22917 phase 0 - GCCCTCAAG]GATGATGATGCTGAAACTGGATTGACAGATGGAGAAGAAAAAGAAGAACCCAAAGAAGAGG AGAAACTGGGAAAACTTCAGTATTCACTGGATTATGATTTCCAAAATAACCAG ac078917.14 28954/28963-29076 phase 0 - CTGCTGGTAGGGATCATTCAGGCTGCCGAACTGCCCGCCTTGGACATGGGGGGCACATCTGATCCTTACG TGAAAGTGTTTCTGCTACCTGATAAGAAGAAGAAATTTGAGACAAAAGTCCACCGAAAAACCCTTAATCC TGTCTTCAATGAGCAATTTACTTTCAAG ac078917.14 33015-33182 phase 0 - GTACCATACTCGGAATTGGGTGGCAAAACCCTAGTGATGGCTGTATATGATTTTGATCGTTTCTCTAAGC ATGACATCATTGGAGAATTTAAAGTCCCTATGAACACAGTGGATTTTGGCCATGTAACTGAGGAATGGCG TGACCTGCAAAGTGCTGAGAAGGAAGAG ac078917.14 36330-36497 phase 0 - CAAGAGAAATTGGGTGATATCTGCTTCTCCCTTCGCTACGTACCTACTGCTGGTAAGCTGACTGTTGTCA TTCTGGAGGCAAAGAACCTGAAGAAGATGGATGTGGGTGGCTTATCCG ac078917.14 90448-90565 phase +1 - ATCCTTATGTGAAGATTCATCTGATGCAGAATGGTAAGAGGCTGAAGAAGAAAAAGACAACAATTAAAAA GAACACACTTAACCCCTACTACAATGAGTCATTCAGCTTTGAAGTACCTTTTGAACAAATCCAG ac027288.26 (152390-152257) phase 0 - AAAGTGCAGGTGGTGGTAACTGTTTTGGACTATGACAAGATTGGCAAGAACGATGCCATCGGCAAAGTCT TTGTGGGCTACAACAGCACCGGCGCGGAGCTGCGACACTGGTCAGACATGCTGGCCAACCCCAGGCGACC TATTGCCCAGTGGCACACCCTGCAGGTAGAGGAGGAAGTTGATGCCATGCTGGCCGTCAAGAAGTAAAGG *** AAAGAAGAAGCCTTTCTGCATTTGCCCATATAGTGCTCTTTAGCCAGTATCTGTAAATACCTCAGTAATA TGGGTCCTTTCATTTTTCCAGCCATGCATTCCTAACACAATTCAGTGGTACTTGGAATCCTGTTTTAATT TGCACAAATTTAAATGTAGAGAGCCCCTAAGTCCTTCATCATACCACTGCCCTCCAAATCTACTCTTCTT TTAAGCAATATGATGTGTAGATAGAGCATGAATGAAATTATTTATTGTATCACACTGTTGTATATACCAG TATGCTAAAGATTTATTTCTAGTTTGTGTATTTGTATGTTGTAAGCGTTTCCTAATCTGTGTATATCTAG ATGTTTTTAATAAGATGTTCTATTTTAAACTATGTAAATTGACTGAGATATAGGAGAGCTGATAATATAT TATACGGTAAATATAGTATCGTCTGCATTCCAGCAAAAATATCAACTCGTAAGGCACTAGTACAGTTAAA CTGACATCTTAAAGGACAACTTAAACCTGAGCTTTCTATTGAATCATTTGAGTACCAAGATAAACTTACA CCACATACTTGGTGGGTGAATCCAATTTTGTAGAATTCCTACACAGGCAAAATAGCATGATCTGAGCAGC AGCATCCAGGCTGACCTCAAGGAAGCATAGCCACAAAACAGAATAGCACCTGTCTGTACATATTTACAAA GCTAAAATAATGGCTTCACTCTTATATTTGAGGAAGCAACTGAACAGGAGTCAATGATTTCATATTACTG CATATAGAATAACAACAAGGTGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACATTTGT TTGGGGATGGGGGAGAAGAAGCTAAGGGGAGAAGTCAACATTTATGAAATATTGCCTGACTATTTAAAAA GAAAAAAGTAGCTCTCCATTATCACCTTTATACAAAATGTACATCCTGTGAATTCTGTTCCAGATTTCAC ACCTACAATAATTCCAAAAGGTTTGCACATTAGAGTTTGTAACAAAATATTTTATTATATAAAACCAGGT TAGAAGGAATGCAGGATATTTTTAACACAACAATCTGTGCTTATTACACAAAATTACTTTGTGGTAAACA GACAGTATTGTAATCCCATCAAAAGATGAAAGAAAAACAAAAACAAAAACCAACAACAATTAGCCATAGT TCTGAATGCACTTCAATTAAGCCAAAACAGACAGCTAGTGATCTTTTTATATGCTCTTTTTACTTAAGTT TTAATTTGTCCTTTAAAAAAAGGTGAAACAAACCAAGAACAAGTTCTAGAAAACTGAAGCAACCTCTTAT GTATACTAGATGCTTGATTTAGGAGGAGTTTTTAAACGTTTTCAATGTTATTATGTAGTAAATGACACTA TTATGAAGCTACTAGTCATTCCATAAGAGTCTTAAAGGACTGCTCTGTGTAACACTGTGACTGCCGTGTG TGCTTAGACCCGTAGTTTCCTCAGTGGATAGCACTCAATTTATTCCGTAGTGATATTGTAACAATACTGC CATTCCCTTCTACTGCACTGCCCAAGGTGTGTGTAGCACAAACAGTTCTCATTACAAAGGACCAATTCAG AACTGAAAAGCTATGCATAGGACAAGGAAGATACATAGAATGGGGTGGAACACAGCATTTTGTCAAGCAC TGTGCAATATTCCATATTTTTCCCCACTATGGTAGACAACCATTTCGTGGAAGGGCAGCCTATTATCCCA CACTGCATCTAGCCTTTTGTCCCATTCACTTCTGTGATCCATTTTAATTTCCAGGCCACAAGACAGTAGT GATGCTCTGAAATGAAAGTTTGTCTTCACAAATATCAAAACAAAATGGAGGAAAACTAAGCATTGGCCTC ATGTTCAGTCTTCAGGATATCACACCACGTCTTTTCAAAAACTAAAGAGAATTCAAAAAGGGCTGATGGT AGGCTTTGAACATGGGGTTGGCTGTTTCCCAGTAAAACTGGAATTCCTGTCGTTACTGTTTCCTTATCAA AGAAGGGGCAAGCTCTTTTGCCTTTTAGGCCAGACATAGCAAACGCTTTATAATTGGCATAGACATAAAG GATAAAAGGAAAATAACCGTCTGCCGATGGTCCGTACTTCTTAAAAAACATAGGTAATAGAAAATATACA CAAGTCAGAATGTGAAATTAAATAATGGTTTGAACAGAAAATTCAAACAAGACTCTTTCCAATTTAAAGG GCCAAACCCTACCAAAGAGAGGGAGTTGACTGGCTTTTAAAAAGTATTTAAATACCACAAATGACATTTA ATTTCACTGTATTCAGCTTTAAGTTGTTCACAATGAAACCACACTTTCAAACAAGCAGGTTCAAGCTGCT GAATAGACATTATTTCTTGCATTAAAATACCACTAATGCATTCTCTTGCAACACTGCCAGACATGGGATT GTCACCATAGAATTAGTTGGTACTATGCCATCTTTCACTCTTTCACAAGTCAGTGATGGAACCTGCTTTA TGACCAAGATTCATCCTCAAATAAGCCACATGTACCCTTCTGACAAAGCTGTGTAAAGTATTAGAATCTG ATGCTCTAGAAAGATCCTAGTTGCCTTTGTGTATATTTACTGCCTGCTTGAGTGTTTCTATGTGTGGGTT TTCCCTGTATCTTGTAGAAATGTTGGGGTGTTTTCCTCTGCCATATGGCTCGTGGCCTGCGAGCCAACTA TTTCAGCTGTATTTTACCTTCATTTTTGATGAGGTGATTTAAATTTTGTTTCACTTTGTGTAGTGAATTC CACAGTAGTTTTCTGATTGTTGTTAAAAATGACTTAACATATTACACAGATATTCAATAAAAATGTTTTA TTTCCTGTTG ac027288.26 (147545-144456) -------------------------------------------------------------------------------- 70. Homo syt2 Hssyt2 Abundance moderate Chromosome 1 Size >120 Kb Transcript complexity affecting 5'UTS MRNIFKRNQEPIVAPATTTATMPIGPVDNSTESGGAGESQEDMFAKLKEKLFNEINKIP^ LPPWALIAIAVVAGLLLLTCCFCICKKCCCKKKKNKKEKGKGMKNAMNMKDMKGGQ^ DDDDAETGLTEGEGEGEEEKEPENLGKLQFSLDYDFQANQ^ LTVGVLQAAELPALDMGGTSDPYVKVFLLPDKKKKYETKVHRKTLNPAFNETFTFK^ VPYQELGGKTLVMAIYDFDRFSKHDIIGEVKVPMNTVDLGQPIEEWRDLQGGEKEE^ PEKLGDICTSLRYVPTAGKLTVCILEAKNLKKMDVGGLS^ DPYVKIHLMQNGKRLKKKKTTVKKKTLNPYFNESFSFEIPFEQIQ^ KVQVVVTVLDYDKLGKNEAIGKIFVGSNATGTELRHWSDMLANPRRPIAQWHSLKPEEEVDALLGKNK - start1 ACTTCGGAGCCGAGTTGGGGCAGCGGTGGAGCGGGGACTTCGCGCCCCCAGGGGAACGGGCGCCCCTGCG AAACCGTCGCCAGCCACGCGTCCTTGCCGTCCGACGCCCCCTCACATTGGAGACCCCGGATCTCTCCCGC CTCCTTCGGGTCGCTCTCCG ac104463.3 (112157-111998) - start2, also found on chromosome 15 ATAGAGAGAGGGAGAGACTCGAGAGCGAGCGAGCGCGGGAGCGAGGGCCGCAGCGGCAGGGCCGGCGGGG AAGTGGGAAGAGGGACCTGGACTTCGGGACCCCAGCTGTCCCCGCCCCCGCCCCCGCCCCCGCCCTCTCC ACCAGCTCAGGCTGAACGCGCCCGGAACGTCCCAGG ac104463.3 (45193-45018) ac120045.19 (174654-174493) chromosome 15 - also found on chromosome 15 CTGTTTCCTCTGCCACCATGAGGAACATTTTCAAGAGGAACCAGGAGCCTATTGTGGCTCCTGCCACCAC *** CACCGCCACGATGCCCATTGGACCCGTGGACAACTCCACTGAGAGTGGGGGTGCTGGGGAGAGCCAGGAG GACATGTTTGCCAAACTGAAGGAGAAGTTATTCAATGAGATAAACAAGATTCCCT ac104463.3 (7529-7335) ac120045.19 (136594-136406) chromosome 15 phase +1 - TACCACCCTGGGCACTGATCGCCATTGCTGTGGTTGCTGGGCTCCTGCTTCTCACCTGCTGCTTCTGCAT CTGCAAGAAATGCTGCTGCAAGAAGAAGAAGAACAAGAAGGAGAAGGGCAAAGGCATGAAGAATGCCATG AACATGAAGGACATGAAAGGGGGTCAG ac104463.3 (6361-6195) phase 0 - GATGACGACGACGCAGAGACAGGCCTGACTGAGGGGGAAGGTGAAGGGGAGGAGGAGAAAGAGCCAGAGA ACCTGGGCAAACTGCAGTTTTCCCTGGACTATGATTTTCAGGCTAATCAG ac104463.3 (4858-4739) phase 0 - CTTACTGTGGGCGTTCTGCAGGCTGCTGAACTGCCTGCCCTGGACATGGGAGGCACCTCAGACCCTTATG TCAAGGTCTTCCTCCTTCCTGACAAGAAGAAGAAATATGAGACCAAAGTCCATCGGAAGACACTGAACCC TGCCTTCAATGAAACCTTCACCTTCAAG ac104463.3 (4285-4118) phase 0 - GTGCCATACCAGGAGCTTGGGGGCAAAACTCTGGTGATGGCCATCTATGACTTTGACCGCTTCTCCAAAC ATGACATCATTGGAGAGGTAAAGGTGCCTATGAACACAGTGGACCTCGGCCAGCCCATTGAGGAGTGGAG AGACCTGCAAGGCGGGGAAAAGGAGGAG ac104463.3 (3797-3630) phase 0 - CCGGAGAAGCTGGGCGACATCTGCACCTCCCTGCGCTATGTGCCCACGGCCGGGAAGCTCACTGTCTGCA TCCTGGAGGCTAAGAACCTCAAGAAGATGGACGTGGGCGGCCTTTCAG ac104463.3 (2214-2097) phase +1 - ACCCGTACGTGAAGATCCACCTGATGCAGAATGGCAAGAGGCTCAAGAAGAAGAAGACAACCGTGAAGAA GAAGACCCTGAACCCATACTTCAACGAGTCCTTCAGCTTTGAGATCCCCTTCGAGCAGATTCAG ac104463.3 (1091-958) phase 0 - AAAGTCCAGGTAGTGGTCACCGTGCTGGACTATGACAAGCTGGGCAAGAACGAAGCCATAGGCAAGATCT TCGTGGGCAGCAATGCCACGGGCACAGAGCTGCGGCACTGGTCCGACATGCTGGCCAACCCCCGGAGGCC CATCGCCCAGTGGCACTCGCTCAAGCCTGAGGAGGAGGTGGATGCACTCCTGGGCAAGAACAAGTAGACA *** GCAGCGGCTGGGACCCCACACCTTTCACGGACACTGACAAGATCCAGAGCTATCAATACCTCAGTTATGC AACCTTAGAGGTTTTCTTTTTTCTTTCATTTGTTGGGTGGTTGTGTCCTTGTTTTTCCTTGTTTTTCTCT TTTTAAAGACCAACTTCCCTTTGATGGCTGTGTGAGGAGAGTCCCCTAAGAGGTGAAAGAGAAGCCTGGC TCTGTTCACGGTCCCAGGAGCTGTCCTTGCTGCATGCCCTGTCACAGTTCCCTCGACTCTTTCAAAGCTT CACATCTGCCTCACCCCAAGCGAGGCTCTCTACTGGCACAAACTTGCAGCAGTTCCTGTTTTTTGAGCCT TCTGGACCAACAAAATGGCAGCACATCCTGCTTCCTGACAGGGAAGGCATCACAGTGGCCAATGATCGTG TGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTG AGCATTTCTCTTCATTCCTGGAATGTGTGTGTGTGTGTGTCTCTTTGAGCATCTCTCTTCATTCCTGGAA TGAGCCATGGACAGTAAAGTTGTGTGGGAAAAGAAGGCTCTTTGGGGACCCTGACATGAAGAAGTCCACT AAGTGGGAGATCTTCTCTCATCTATGGCAAAGTCTCAGGATCCTGTTCAGATATCGGGGCTTTCATACTC CTGTTGGTGGCTATTTGGGAGGCAGCAAGATGTGAAGACTGGATGTGTTCAGAACTAGGACCAAACGATG CCATCAAATACTTCCTCCTGCCAGTCATGGTTTCCCCAGAAGTGTAGTTCCTGGGACATTCATGGATATG AGCTATTCACTAGTTGGGTCAGACTAACAGGGACTCTCAGTCCCAAAATCTCACTCTTATTGACAATAAA TATCAAACTATGAAGAAACAGAAGTCCCATTACCAGAAAGACCAAAATTAAACTCCTGGATCTTCACCCC ATCCAGTGGGAAACACAGATGCTTTCTCCCTTTCCAGAATATAAGCAGCCAAGTTCATTTGCATTTATTC CCCATTGTGCTTTTGCTTCTGTTTCTCTTTTAAGTGGAGCAACACTGTCTGAAGACACGTTATCTGTGCA GAGCCAGAGAACTTTAAAAGGAAAGTTTAAATGTTCTTAGTTCTCCTGAGGTCCAGGTAAGAAGGGGGTG GTAAGAAGAGGATGGGGGACAGATGGCTGAGATCCCTTGGGAGGAGATATAGGGGAGCACTGGAATTCCC CCGACTCCCACTCCTTGCTCCCTTGGCCCTCTGCCCTCCATGCTGGAGAGCTGATAGGTAGCTGGAGTGG CCCAGGGAGACCTATGGGAAGGACCCGTCCTACCATTAGGGGGCTTCTCTCTATGAATGCTAAGAAACAA AGGGCATCCATTCCAAATGAGTAGCAGAGGTGACCTTCTAGGGTTTCTACCCATGCTCAGTTGTATCCCA TTCCCTGTTCACCTTTTGTCCCCAGCACTGATATAAAAGCCATATATATGTTAGTCAGGTTTGCACTGAG TCTTCTTCCAATCCTTCAGCCTGGACAACAGAGTGAGGTCCCCTTGTGGCCAGAGGCCAGCCCTCCTTGC CTGCCTTCCTTTGACCTCTCTTTTCCATCCATGAAGCCCTCAGGCCCTTGCCATTTTTTCACCACAGAAA ACTCATGGCTTCTCCAGAAGCCTGAGTATCTCTCTTTCCCAGCACAAATGGCAGCATCTCTATCCTGCCC CATCTGGGCCACTTCAGCTTCCTGTAGACACCCAAGACAGATGGACAGTGTTGGAGGGAATCAGGCTTTG AGGATCCAGTGTGAAGAAGTTGCAGAGTGTCTTTTTATTTTATTTTAAAAAGGGGGAAGGGGCTTTTGGT TTTGCTTTGTTTTTTGGATGAAGGAGTGAGGGAAATGAGGGAATACCCCCACCAGAAACAGACTGGAAAG CCTGCCTGTCTCTTGGAGATCCTTCTTTGTCTTGTTAGTGGTACATGGGAAGTTATGTTTTTACTGGTGT GTGTGTGTGTGTGTGTGTGTGTACTTAATGATGGGAAGGTAAGACTCTGATCAGGATTATGAACTGCGGT CCTTGGGACCAAAGGTGTGGTCATGGTAGAGAGTTGTAGGACAATAGGGTGTTTTCAGAATCTGGGTGGC CACAGAGTGGGATTTCCTGGTATGGACATCAGAAGTCACTGGACTCTTCTCCCAACCCCAGAGTTATGGG ATTTTGGTGCTTTCTCAGGGTCTCTCCCCAGACTCACTCTTCTCACCCATATCCCACAGACTCACTCATG GAGACCCCCTTGTCAATATCCCCTCTACCTTTACTCCTTTGCCCTTTCCCAATTCATCTTCTACCACCTG GATTCTTTTCCATTCATGAACTTCATTCAGCCCTTCCAAAGCCCAAGATTTGCATTCCCTTGACAGGGAG GAAAGGCAATGGTAGGAACCTCTGGTGGTCTGGGTGTCTATGTGCCTGGTGACCAGGGCTGGATTTTTAT TACTCTGAGCCCACTGCTAGTGAGGAGCCTTGAGGGGTGGGGACAGGTTGCTGAGTGATTTTGAACGTTG ACACCAGTGTGGAGCCAGTGTGGGTGTGGGGAGCAGTGCCTTCCTCAGGTCCCAGCTGGTCCTGATATGC CACGTAGTGGATGGCATCTGTCTTGGTCCATGGGCTTGGTGGGAACATGCTTCTGCTTGTGTGTTTTCCA TACCTGAGGGCTGACGTAGCTTAAACCACAGGGCATCATGCCAAACACTCACTGCTGGGCAGGTTTATTT CTGGGGATGTCAGGGTACTGGGGTGTAGGCACTAAGCAGGATAGAGTTAGGGTGTCTGGCTAGTAAGGGG TTCTGGACGCCTCTGGGGCTGTGAGTTTTCATCTCAAAGTCTGTTCCAGAGAAAGGAAAGTAGTATAGAG GTGATTTTTAGAGAAGCTGAGACCATGAAAACAAGCCTAATCCCATCCAGAAACTGGGGTAAAGTCTGAA AGTTCGTTTTCTTCTTCCTCCCTGAATAATTGTTCCAGAAGGGATGCTAACTCTGCCAGAGCTACAGGCA GATTTTTGGGCTTTGGAAGTGGAAGCTGAGGCCTGGGGAAGGCTGGGTAAGGAATGCTGGGGCAATCTCA GACAGTAGGCAGGTGCTTGGCATGAATGAGAAGTGACTTTCCTGGAGTCCCTCAGTAGAGGATGAGATAG CAGGGATTAGGCCACAGTCTCAGATCCTGATCTTTTTTCTTCCTAGGAAAGCATACATAACTTGTGTCTG CAGAATCAGTGTGGGATGATTTTGCTGGCCCAAGGCTTCAGCGAGAGGGAGAAGAGAGGTCACTACAGCC CTCCTGTGGGTAAAAGCAGCTCTCTTATAAACCTGCCTCCATGCAGTGGGGTGGGGGTAAGGGTGGGTGA CAGCAAAGAGGTTGAGGAACCTCCCTGGGTTTGGGGAGTGAGAGCTTCCATGTTCCCTTAATGTCCTAGG TTAATTCATAAGGCATCTGAGTCCTGGGTCTCACCCAGCCTCACAGAGAGAAAAACTGTCCCTGAGGGTG TCCCCTCCCACTCAAAGGTAGAAAGAGATTGAGCCAGGAACTGCCCTCATATCCTCTGCTCTGCCCCTTC CCTTCCCTTTCCTCTGCCCCTCCCACCTAAAGCTGTTTGGGGCCCTTTCTCAGAGCCCTGGGTGGTGGCA GGCAGGGAGGAGTCCCAAGATCCTGGTGGCCCTGAGCCCCATGCTATGGTTGCCAGATTTGGCAAATAAA AATACAGGATGTCCAGTTACATTTGAATTTCAGTTCAACAACAAACAATTATTAAGTGTAAATATGTCCT AGGCAAATAGTTGGGACATATACTAAAAAATAATTTGTTGTTTATCTGAAATTCAAATGTAACTGGTCAT CCTGCATTGTGTCTGGGAACCCTACCCTATGACTTTTCCCCCTCTCCCTTTGGTCCCAAGGGGCCAGGAA CCCCAAGGATTTGACTTAACCAGTTTTTTGAACTGCAATATTGAGAAGGGGACACTGTGACTTGAAGACA CATGAATTACTTTATTTTTTAAGCAACAACAAAATAAGAACCTTCTGAAGCCATTTGAGCCTCATCTGCC CCCATCCGTGTATATTTAATTATATATAAAAGAAGATAATTACCTAGAAACATATGAACAGAATCTTGTT TAATCAAGATGCATGTCTATAACTTTCTGTAAATAGCCGCATGGCAATGCTGAGAGTCCCCTTGATCCCC AACCTCAAACCCATTTTACAGAACTGGTTGAGGCTGCTCCTTTGATTTTATGTCGTGTAAAGTCTTTGTT CCCCAGCCCCACCCCTGCCTCCTCCCATCGGGAAACCCCCCATGGGAGTCATCAGTGGGCGGGAGTCGGT GCCTGCTCCAGTCCAGCCCTGCCTTGGGAGATGCTGGAGGACCCTGTCGCCCTGAAGGCCTGTTTGCTGC ACATCTGCCTGCAGAGCCAAACCTCAGGGCCCGGTGCAGTGTCCAGCCTGGTATCTGGCATCCCAGTAGC TTCCATGTTCTGTGTATGTGTGTGGTGTGCCCCTTCCTCCCACTGTTTGAATTCACTGAAAAGCCATAAA GGGGGCCTCCTGCTGGAGATTTGGCCTCCCTTGGCTCCTCCCAGGAGCCCCCATGTCTCTCCAACTGGCT CCCCACAGACCACTTCTGAAGGGCTCACCTGTTGTCACTCCCTCCTGCTCCCTCAGTCCCGTGTCATGAG AATGGACGGTGTCCAGGGCTTCCGGTGGGGTCTCAGGAGATGCCCATGCTGGCCCTGCCCGAGCTGGCTT TCTCGGCCTGGGTTCACAGTTCAGCTCCATCTCTACGCTGGGCGAGGAGCAGACAGCAGTGGGACTCCAT GGTTCTGGATACCTTTCCTGGGGTCCCTGTGGAGGCAACCAGGATTTTCAGGAGCAGCCAGTCAGCAGCT CAGCCAGGGATGACAGAACCATCCCTGCTTACTCACCTCTGTAGTGTGAGGGTCTGTGGGTGGTGATGGA GGAGGGACTCAGGGAGAGGCCGGTGAATACAGGGGCTGACGCTCTTCCCTCGTGCATCCTCCTGCAGTCT GACAGAAAGCAGCCCAATAGCGGGGCAACCTCAGGGCTACCAGCGATCCCCTGAGAGTGGGGTGGGCAGG TTCAGCTGTGAGAGAGGCTCAGGCAGAGCAGGTGTGGACTAAGTCCCCTGACCTTCACACCTGCTCCCCA GAGAAGCCCCAGCCAGTTGCACCAAGTAGCAGAGGTGAGTAGAGGGGCCTGGGGGCTTCCAAGGCCCCAG GTCATCCTGTTGAACTGAGAGGGACAGGTAGCCCCCCTGCCTGCGCCCCTGGCCCATGGGCACCTGAGGG CAGTACTGCATGGGAAGAGCCCAGGATGCCTCAGGCCTGGCAACTGTGACAAGTATGAGGAAGGAGAGAG AACGGGAAGGGAATCAGGCAGGGCGCATTCGAGGAGGCCAGAGGTGGCGAGGCAGGCTTGCCCTGCACAA ACCACAACAGAAGTTGCACACAGAAGTCCCAGGGACCTTTGTGCTGGGAACTGAAAGAGTGGGGAAGGTG GAGGGGACCATTTCAGAGCAGGCTGGAATCAGGTGCTTGGACCAGTGAAGACATGTCTTGCTTCCTCCAG CTCTCTCTGGGGCCCTCCCACTCTCCACACCCACAGCAGAGACAAATTGAGGCAAGAGTTGAGAGAGCAT CTGTCTGGTGAGGTGATGGGAGCAGTGTGCATGGGGCACCAGGAGTTCCTCCATCCCACCTGCCTTAGCG ATCAGGACTTTAGGGGGGCCTCTTCAAAGATAGTGACCCTTCTGCCCTGACTCCTGCCCATCTAAGGACT TGATTTGCTGCTTTCTGAAAACCCTGGGGCTGAAAACTTCAAAATCAGGGCCTGGCAGAGCCTAGCTTCG CCAAGGTCAGCCCACCAGGAGCCCTGCCTTCGTCTCCATAGGAAGGACACATGTACAGCCCTTGCCCCCG GCCCTCTCATTCCCACTTCTGCTTGGCAATGCTCTCCATCTCCCTTATGTGGACTCTTGTTCTTGTCTGA TCTCTTGTCAAATTGTTATTTTGTAATGAACTGCGTCTCCTTATTAAAGAAATGAGCTGAAAGAAACCTG GGGGTGGGGGGTGTCTCTGGTTGTTTTTGCTGCGCTGAGGTGGGGGTGAGGGAGTGGGAGCTGCCTGTGA GGGTCAGTATGGTGGGTGAGGGTGGTGAGATGGTCCTGAGGCTCTGGCTTCTAACCCAGAATCTCCCTTC AGGGAAGCACCAAAAGGGGCTGAGGTCCCCTCTCTCCTGGGGTTGGGGGAAGACCAGATTGGCACTCTGG TGGGTGCTGGGGCCCACACATCTCCTGAGAACACATGCCAGGCTGTGGAACTGTGGGGAGTGTGGTGGTG CCGGGGAACATTGTCTGGGAGGCTGGGCGGGGCGGGGTGGTGGTGGGGACTATATTCTTGAATTCCCTTC CAGTAGAGCTGGGCTTAGGGAACAGCCACAGTCTGAGCCCAATGACGAGAGGGAGGCTGGCCCTGGGAAG TGGGAATTTGAAAAGTAACAATTTCTACAAAGTCCTCAGTTGACTCTTTGCAAATAACTTGAAATGTCTT TAACTTCTGAAGCAAAGATGTTAGGGACCAGGGATAGGGCGTCAGAATTTTTAGGGAAAGGGAGAGTGGG ACAGCATTGCCCCCAAAGACCAGGGAAGAGTAAAACTCCTTCTTCGGTTCCCACTTCCACCTGTCTCCTC TCCTTGAGGATAGACCAGCAGCTACCATTTTTGTCAGTTTACACCAGCACCTGTCCTCCAGGAACACCGT TGGCTAGATGTGTGCTTGTCCATCAGGTCCAAAGGCATGGGGGCAGTGAATGCAAGCAGGGATGGGAGCT GCCCATCTGAGGGAGCATGAGCCCAGATCCTTTAACATCTATCCTGTCTTGCTGCTTCAGTCCCTAAGGC TGGGTAGGGTGAGGGGCATGAGCCTTTCAGCAGACGGACTGGGATTTATCACCTGAGGGTCTCCTGGCTA AGAATATGAGCTTTTTACTCTGCCAATAGGTTGTGGCCTTCTCCTTTCCCCCCAAGAGGGCTGGACCACG TGACGGCTAGGTGATACTGTATCTGCAGACCTTACTACAACCAGTGGGGGTCAGAAAGAGAAATGACATT TGCAGTCTAGGAACCCTTTGCATCGGTCATGATGACCGATGCAAAGGGTTCCTAGACTGCAAATGTCATT TCTCTTTCTGACCCCCACTGGTTGTAGTAAGGTCTGCAGATACAGTATCACCTAGCCGTCACGTGGTCCA GCCCTCTTGGGGGGAAAGGAGAAGGCCACAACCTATTGGCAGAGTAAAAAGCTCATATTCTTAGCCAGGA GACCCTCAGGTGATAAATCCCAGTCCGTCTGCTGAAAGGCTCATGCCCCTCACCCTACCCAGCCTTAGGG ACTGAAGCAGCAAGACAGGATAGATGTTAAAGGATCTGGGCTCATGCTCCCTCAGATGGGCAGCTCCCAT CCCTGCTTGCATTCACTGCCCCCATGCCTTTGGACCTGATGGACAAGCACACATCTAGCCAACGGTGTTC CTGGAGGACAGGTGCTGGTGTAAACTGACAAAAATGGTAGCTGCTGGTCTATCCTCAAGGAGAGGAGACA GGTGGAAGTGGGAACCGAAGAAGGAGTTTTACTCTTCCCTGGTCTTTGGGGGCAATGCTGTCCCACTCTC CCTTTCCCTAAAAATTCTGACGCCCTATCCCTGGTCCCTAACATCTTTGCTTCAGAAGTTAAAGACATTT CAAGTTATTTGCAAAGAGTCAACTGAGGACTTTGTAGAAATTGTTACTTTTCAAATTCCCACTTCCCAGG GCCAGCCTCCCTCTCGTCATTGGGCTCAGACTGTGGCTGTTCCCTAAGCCCAGCTCTACTGGAAGGGAAT TCAAGAATATAGTCCCCACCACCACCC ac015973.2 (140072-133388) -------------------------------------------------------------------------------- 71. Homo syt3 Hssyt3 Abundance moderate Chromosome 19 Size >18.5 Kb Transcript complexity affecting 5'UTS,Nterm and Cterm MSGDYEDDLCRRALILVSDLCARVRDADTNDRCQEFNDRIRGYPRGPDA^ DISVSLLSVIVTFCGIVLLGVSLFVSWKLCWVPWRDKGGSAVGGGPLRKDLGPGVGLAGLVGGGGHHL AAGLGGHPLLGGPHHHAHAAHHPPFAELLEPGSLGGSDTPEPSYLDMDSYPEAAAAAVAAGVKPSQTS PELPSEGGAGSGLLLLPPSGGGLPSAQSHQQVTSLAPTT^ RYPALPRPLTQQTLTSQPDPSSEERPPALPLPLPGGEEKAKLIGQIKPELYQGTGPGGRRSGGGPGSG EAGTGAPCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTK^ VHRKTLNPVFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDIVEGGS^ EKADLGELNFSLCYLPTAGRLTVTIIKASNLKAMDLTGFS^ - alt.Nterm DPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYD^ CIGHNEVIGVCRVGPDAADPHGREHWAEMLANPRKPVEHWHQLVE[VSRGPTPTPDKHPCTLGPFIHATNAL HVRESQSQAS alt.Cterm ^EKTVTSFTKGSKGLSEKENSE - start 1 GCGGGGCTGCGGCGGCGGCGGCGGCGGCAGCGGCGGCAGCGGCGGCTCCGG ac008743.9 (139486-139436) - CCCCTAGATCAGACATTCTCTCTCATTACCCGGCGCGTGGGAACGGGTCCACAGCCCCTTGTCCGCCCTA GAACCCCCATGGGCTGCCGCCCGCCGCCGCCTCGGCTGCCACCCAGGACACGGCAGAGATAAGCGCAG ac008743.9 (138808-138671) - start2 CTCTATGTCTCCTCTCGTTGGATTGTGACACCGGGAGGTCAGGGAACTCCAGGACCTTGTTCTCTGCTGG ATTCGCAGCAACCAGCACAGCACGTAGGGCGTAGTTGGTGCTGGATGGATGTTTGTTGAATGAATGAATG ATGAATGGCTGGCACCTTGTCTGCTCATCCCTAACTCCTGTTCCTTCATCTGTGCAGCCCTAATCTTTGT TTCCTCATCTGTCCATCCCTTTATTTGTGCATCCTCATTCTTAG]CCCCTTCACTGCCCTTCTCCATCTCT TCCTCCTTGTTCATTTGTCCCTGTTCTCTGTCCTCTACTCCACTCATGCCCATCTCTGTCCCCTTGACTT ACCCAGTCCCTGCTACTATCTCCATCCCTAATTTCTGCCCTCTTGTCTGTCTACTCCTAATTCCTTTTCC TTGTCCATCCCTAATACCTGTCACCTTGTCCTTCTTCCTCGAATCTCCATCCCTAATCCATCTGCCCCTA ATCTCTGTCCCCTTTGCCCATCCTTCCTTTTCTCGGTGTCTCTTTCCACCCTTATCTCCACACCTGCCCA CCCTGCACTCCCATTCTGTTTCCCATCTGCACCCTTGCCCCATCCCTCCCACACACAG]GACCAGACGGCC ACCATGTCAGGAGACTACGAGGATGACCTCTGCCGGCGGGCACTCATCCTGGTCTCGGACCTCTGTGCGC *** GGGTCCGAGATGCTGACACCAACGACAGGTGCCAGGAGTTCAATGACCGAATCCGAGGCTATCCCCGGGG TCCAGATGCAG ac008743.9 (137690/137436/137072-136910) phase +1 - ACATCTCCGTGAGCCTGCTGTCGGTCATCGTGACATTCTGTGGCATTGTCCTTCTGGGTGTCTCTCTCTT CGTGTCCTGGAAGTTGTGCTGGGTGCCCTGGCGGGACAAGGGAGGCTCGGCAGTGGGCGGTGGCCCCCTG CGCAAAGACCTAGGCCCTGGTGTCGGGCTGGCAGGCCTGGTAGGCGGAGGCGGGCACCACCTGGCGGCTG GCCTGGGTGGCCATCCTCTGCTGGGCGGCCCACACCACCATGCCCATGCCGCCCACCATCCACCCTTTGC TGAGCTGCTGGAGCCAGGCAGCCTGGGGGGTTCTGACACCCCTGAGCCCTCCTACTTGGACATGGACTCG TATCCAGAGGCTGCAGCAGCAGCAGTGGCCGCTGGGGTCAAACCGAGCCAAACATCCCCTGAGCTGCCCT CTGAGGGGGGAGCAGGCTCTGGGTTGCTCCTGCTGCCCCCCAGTGGTGGGGGCTTGCCCAGTGCCCAGTC ACATCAGCAGGTCACAAGCCTGGCACCCACTACCAG ac008743.9 (132457-131932) phase +2 - GTACCCAGCCCTGCCCCGACCCCTCACCCAGCAGACTCTGACCTCCCAGCCGGACCCCAGCAGTGAGGAG CGGCCACCTGCCCTGCCCTTACCCCTGCCTGGAGGCGAGGAAAAAGCCAAACTCATTGGGCAGATTAAGC CAGAGCTGTACCAGGGGACTGGCCCTGGTGGCCGGCGGAGCGGTGGGGGCCCAGGCTCTGGAGAGGCAGG CACAGGGGCACCCTGTGGCCGTATCAGCTTCGCCCTGCGGTACCTCTATGGCTCGGACCAGCTGGTGGTG AGGATCCTGCAGGCCCTGGACCTCCCTGCCAAGGACTCCAACGGCTTCTCAGACCCCTACGTCAAGATCT ACCTGCTGCCTGACCGCAAGAAAAAGTTTCAGACCAAG ac008743.9 (129817-129430) phase 0 - GTGCACAGGAAGACCCTGAACCCCGTCTTCAATGAGACGTTTCAATTCTCGGTGCCCCTGGCCGAGCTGG CCCAACGCAAACTGCACTTCAGCGTCTATGACTTTGACCGCTTCTCGCGGCACGACCTCATCGGCCAGGT GGTGCTGGACAACCTCCTGGAGCTGGCCGAGCAGCCCCCTGACCGCCCGCTCTGGAGGGACATCGTGGAG GGCGGCTCG ac008743.9 (129158-128940) phase 0 - start 3 (rare) GGAAGCCTGAGCCCTGGATGTCAGGGTGTAAAGCAGGAGGCTCCGACCGGAGAGAAAATCAGGGAGAGTT GAAGAGGGGCTGAGGCAAGATATCGCTGACCTTTTCCCCAACTGCAG]GAAAAAGCAGATCTTGGGGAGC TCAACTTCTCACTCTGCTACCTCCCCACGGCCGGGCGCCTCACCGTGACCATCATCAAAGCCTCTAACCT CAAAGCGATGGACCTCACTGGCTTCTCAG *** ac008743.9 (125780/125663-125543) phase +1 - ACCCCTACGTGAAGGCCTCCCTGATCAGCGAGGGGCGGCGTCTGAAGAAGCGGAAAACCTCCATCAAGAA GAACACGCTGAACCCCACCTATAATGAGGCGCTGGTGTTCGACGTGGCCCCCGAGAGCGTGGAGAACGTG GGGCTCAGCATCGCCGTGGTAGACTACGACTG ac008743.9 (125210-125039) phase +2 - CATCGGGCACAACGAGGTGATCGGCGTGTGCCGTGTGGGCCCCGACGCTGCCGACCCGCACGGCCGCGAG CACTGGGCAGAGATGCTGGCCAATCCCCGCAAGCCCGTGGAGCACTGGCATCAGCTAGTGGAG[GTGAGT AGGGGTCCCACACCGACCCCTGACAAGCACCCGTGCACCCTCGGCCCCTTCATCCATGCAACGAACGCCC TGCATGTTCGTGAGTCGCAGAGCCAGGCGTCCTAGGTTTCAATCCCTGCTGTGCCAACTTTAGCTGTGCG *** GCTTAGAGCCAGTTACCCAAGCGCTCTGTGCCTCAATTTACCCACTAGGAAATGGGACTGTTGATAGCAT CTTCTGTTAGGATAGAGGTGAGATGTGCTGAGTTAAACGTTCTGTAGGTGGTCGCTGCTGTTGTTACCCA TGAGGCTAAGTTGAAAATAGAGGGGGCTGG rare second pickup (atypical gc intron donor) joins to last 3' UTS exon below phase 0 ac008743.9 (124940-124808/124492) - GAAAAGACTGTGACCAGCTTCACAAAAGGCAGCAAAGGACTATCAGAGAAAGAGAACTCCGAGTGAGGG *** ac008743.9 (122401-122333) - GTCTGGCCTAGGCCCGGGATCGGACCAGGCTCCCTCAGGACCCCATCCTTTCCTGCCCGGACCGTGAATT CATCTCCTTGAAGCCATAACGTCCGAGCTGCTGGTGCGGGGCAGCCCTGGCCCTAGGCTTCCTAACCCTG GAAGCGAGAGGATGAGAGGAGGCCGGCCCAGCTCCTTCTTTCAGGGTGGGGGTCATTCAGCCTCCACTGT GTCTGTCTTTTCTTCCCTGGGGCTCCCCCTCGAGGCGAGGGGCCATGCATGTCTGGGGGACCCCTGCCCC CCAAAACCCTCTGTCTGTCTCTGTCTCTTTGCTGTTTGTCCAAGACTCAGTGTCCCGACCCTTGTTCTCG CCGTGAATGTCAATGGGCCAATCCTCTCTGTCCTTTCAGACACACACACACCTGTGTCCACCCCTTCTGT TCGCCACACCCCTGCGTCTGGCCGGTCCCCCCACTGCTGCTGCTATCAACGCCAGAATAAACACACTCTG TGGGTCTCACTCCAA ac008743.9 (122127-121623) - GCGTGAGCCACCGCGCCTGGCTATTGGCTTCTCTCTCGGGTAGGTGTTTGCAGTGGCAATGAGATGGTCA CTTGGAGCTCCAGGTGTATAATGCTGTATCTGTTATGATACCTTCGGCTGAAAAAA ac008743.9 (121074-120949) -------------------------------------------------------------------------------- 72. Homo syt4 Hssyt4 Abundance high Chromosome 18 Size >9.7 Kb MAPITTSREEF^ DEIPTVVGIFSAFGLVFTVSLFAWICCQRKSSKSNKTPPYKFVHVLKGVDIYPENLNSKKKFGADDKNEV KNKPAVPKNSLHLDLEKRDLNGNFPKTNLKPGSPSDLENATPKLFLEGEKESVSPESLKSSTSLTSEEKQ EKLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDE TFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIKRNVR^ KSSGRGELLISLCYQSTTNTLTVVVLKARHLPKSDVSGLS^ DPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCEGLEDISVEFLVLDSERGSRNEVIGQLVLG AAAEGTGGEHWKEICDYPRRQIAKWHVLCDG - GATGAGCATGTGTTGAATCCTCAAGAGAGGAGGGAGGAAGCAAGAAGGAAAGCTTGAAGGGAGGAGGGGA GGGGGGCAGGTGCTGATTTCAGCCCTGTAGCGTCAGGATTGCGTCAATTCGGGTTCCAGCCACGTCTGGA GTCTCGGAGACGAGCTTCTCAGAAGAGCCAAAACAGGAACCGAGGTGGCAAATCACTGTGCGAGGGCGAG TGGACCTCCCTCTTTGCCTCCTCCCTGTTCCAGGAGCTGGTGCCCTGGGCTCTGCGCTGTTGTTTTCAGC GCTCCGAAAGCCGGCGCTTGAGATCCAGGCAAGTGAATCCAGCCAGGCAGTTTTCCCTTCAGCACCTCGG ACAGAACACGCAGTAAAAAATGGCTCCGATCACCACCAGCCGGGAAGAATTTG *** ac091039.7 (163404-163002) phase +1 - ATGAAATCCCCACAGTGGTGGGGATCTTCAGTGCATTTGGCCTGGTCTTCACAGTCTCTCTCTTTGCATG GATCTGCTGTCAGAGAAAATCATCCAAGTCTAACAAGACTCCTCCATACAAGTTTGTGCATGTGCTTAAG GGAGTTGATATTTACCCTGAAAACCTAAATAGCAAAAAGAAGTTTGGAGCAGATGATAAAAATGAAGTAA AGAATAAGCCAGCTGTGCCAAAGAATTCATTGCATCTGGATCTTGAAAAGAGAGATCTCAATGGCAATTT TCCCAAAACCAACCTCAAACCTGGCAGTCCTTCTGATCTGGAGAATGCAACCCCGAAGCTCTTTTTAGAA GGGGAAAAAGAGTCAGTTTCCCCTGAGAGTTTAAAGTCCAGCACTTCCCTTACTTCAGAAGAGAAACAAG AGAAGCTGGGAACTCTCTTCTTCTCCTTAGAATACAACTTCGAGAGAAAAGCATTTGTGGTCAATATCAA GGAAGCCCGTGGCTTGCCAGCCATGGATGAGCAGTCGATGACCTCTGACCCATATATCAAAATGACGATC CTCCCAGAGAAGAAGCATAAAGTGAAAACTAGAGTGCTGAGAAAAACCTTGGATCCAGCTTTTGATGAGA CCTTTACATTCTATGGGATACCCTACACCCAAATCCAAGAATTGGCCTTGCACTTCACAATTTTGAGTTT TGACAGGTTTTCAAGAGATGATATCATTGGGGAAGTTCTAATTCCTCTCTCGGGAATTGAATTATCTGAA GGAAAAATGTTAATGAATAGAGAGATCATCAAGAGAAATGTTAGG ac091039.7 (160148-159334) phase 0 - AAGTCTTCAGGACGGGGTGAGTTACTGATCTCTCTCTGCTATCAGTCCACCACAAACACTCTAACTGTGG TTGTCTTAAAAGCTCGACATCTGCCTAAATCTGATGTGTCCGGACTTTCAG ac091039.7 (157586-157466) phase +1 - ATCCCTATGTCAAAGTGAACCTGTACCATGCCAAAAAGAGAATCTCCAAGAAGAAGACTCATGTGAAGAA ATGCACCCCCAATGCAGTGTTCAATGAGCTGTTTGTCTTTGATATTCCTTGTGAGGGCCTTGAAGATATA AGTGTTGAATTTTTGGTTTTGGATTCTGAAAGGGGGTCCCGAAATGAGGTAATCGGGCAGTTAGTCTTGG GTGCAGCAGCAGAAGGAACTGGTGGAGAGCACTGGAAAGAGATCTGTGACTACCCCAGGAGACAAATTGC CAAGTGGCACGTGCTCTGTGATGGTTAGCATCCTAGCCGTGAGTTGGAACTTAAAGGTTTTTACTAGGCA *** AGGAGAAATTTTCTTTCTTTCTATATTGGATTGCAAGCTTGGGAAATCAAGCTACCTTTTTGTTGTTGTT GTTGTTGCTAGAAATGGATTGAATTAGTAGACCAGAAAGTAACTTCAAATGTGTATTATGATAATTTCCC TATTTATTAGAAGAGTTGGATAAATTTTCATAAGATATTCAATATCTCCTTCAGATTACCAGTGATATAA CTAGGAATAGTCAGACATTTTATGAATACTGTGCCAGAATCCCAAATTATAAATGTGACAATCTCATTGG AACATGTCACAAAAAGTTAATGTGATTAAGATTTAAAAACGAAAAGTATGCCTTGCCTTGTGAAAATTTA TCCATTTATCTTCAGGTTGGGGAAATCAATTTTTCTTTAAATCCAAAGATACTAAAAAAATGTCCTCCAG TTTGTATTTATTAATTCTGTCATGTGCAAATGGTTGTCCTGCATATAAAAGTATCTGGTCATTTCAGTTT GGTTTGTAATTATTTGATGCAATTTTATCATAAGAGTAACTCAGATTCATTTCAAAAGGACAGTGAACAA GCTGAGAAATTATTTTATCAAAGGGCTGAGTTGAGAACACTGTGGCTGAAATATAATTTTTCTCCCCCCT AAGGTTACATGTGAGTCAAAATTTTGTAAAATATAACCTCACATAAGAACCATGGCCTTGGATTATTCAC TGCCTGTCACAAGCCTCAGTGTGGCCTGAGAAATCCCTATGTACCTTTGTGAAATTGTTGAATTAGTTAG TGAATAAAGAAATAAACTTCAACTAGAAATCCAGTTAGAAGTGCAATTTTCTTATAGGAAATAGGTATAG TGTGCAAGTGTACTTTTAAGGCCATCGTTTGTACCCAGAGTCGGCATGGCCACCTAAGTCTTCATTTAAT TTATTGTCCCCCAGAAAAGATTAAGATGCTACTTGAAAAGACTGTGAAGATTTTTTACATTGCCAGATAA AAAGTGTTACTTAACCAACAAACAAATGTAAGACTACAAAATCGTTCAAGAGCAATTCTAATATAATTTA CATATGTTCACGCAAAATATGCTTAGGCTGTCAAATTAGCACAACAAAGAATGTGTTTCACTATCTTTTC TAGGCTAATTTGTCTTGAGCTGTTGTCTATAGAGCAGTTTACAGACTTGTGTCTTGTATCATTTTCCAGT GCCAGGGTTCTGAAATTCATTCAGAACCTGTTAGATTAAAGCTGCACCCTGTGATTATTTGAAAAGAATT AGCTTGAGAGTAATGTCACTATATTTGAGTTCTTAGAGAAGTATGAGTGGAACTTGAGTACAGTTGAATT ATTAAATATGCAAGTTAGAAATTAAGTCTACTGAAAAATTTACATTTTGAGTCAGGTTTTGTGTCAGTAC TTTAGCAGTTTTTGAGAATGTGTTTGATATCACAGTGTTTGTAAATTCTATGAAAAATGCATTTTCCAAA CAACTTATACATGCTTTTTATGACTATGCCTAATGTAAAGAAAATGTATTACATTCTGTATGTACAAAGA TTAAAAATCAACCTCTTTTTTGTGCTTTAAAATGACTTTGGGATTAAAAAAGCATATTTCCCAATCATTG TCTTCATTCCACTACAAAGTCACCTCACAGCATCTTGCTCCACTCGGCATCTCTGTGAAAGCAACATGAA ATGAACTGTAGTAGGTGTGTAGTTTGGGGAAGTCAAATGGCCATTTTATGTATGTGCATTTGGTATCATG GGCCGTGGAACAGAATATATGTTGGACCTCTGAAAAGTTGTAAGGGGCCAATTCTAAGTATTCTTCACGG CAGCCAGAAGTTAATGGTGGTAGCAGCTGAGGTATGGTTGTTGGACGAGGCCGATTTTTTTTTTTTTAAC ATGGAACAATGAAACCAACAACAAACATTTTTAAAATTAAAATGGATAATTTGTAAATAGTTTTTAGCTT TTAAAATTTAAAGTGTTTTTGAGTGTGAAAAGTTGAGTAAAACTATTTGCAACTGGTTTTCAGAAAAGAG AAAAGAAACAACAAAGGAATTGAAACAGGCAGGGAGATCTTAATACCTAATTTCATCATTTCTGAAAATG TACTGTTTTAGAATGTATTACAATATCAATGTGAATATCTTGAATCCTGTTACAAATCCTGCACTGTATT AAACATGTAAATTAATTGTTTGTCTGATTAGCCAATCTCACCACCCAAATGGGGAGGTATACATGTTTGA AGAACTGTGTAACTCAGTAATTGATTTGTTCTGATGTTGTAACTCAATAGAAGTGTTTTGGAAGGAAGCA TGGTGTGTGAGACAGTGTCTGTTCTTTTGTGCCAGCTCTGTATGATGTTTGTAAGACCATGTTTGTAAGA CATGAATAAATTGCTGCTTTTGCCCAACCCGTTTC ac091039.7 (156402-153638) -------------------------------------------------------------------------------- 73. Homo syt5 (syt9) Hssyt5 Abundance high Chromosome 19 Size >7.2 Kb Transcript complexity affecting 5'UTS, TM region and C2A/B junction MFPEPPTPGPPSPDTPPDSSRISHGP^ VPPWALATIVLVSGLLIFSCCFCLYRKSCRRRTGKKSQAQAQVHLQEVKGLGQSYIDK^ VQPEVEELEPAPSGPGQQVADKHELGRLQYSLDYDFQSGQ^ LLVGILQAMGLAALDLGGSSDPYVRVYLLPDKRRRYETKVHRQTLNPHFGETFAFK^ VPYVELGGRVLVMAVYDFDRFSRNDAIGEVRVPMSSVDLGRPVQAWRELQAAPREE^ Q]EKLGDICFSLRYVPTAGKLTVIVLEAKNLKKMDVGGLS^ DPYVKVHLLQGGKKVRKKKTTIKKNTLNPYYNEAFSFEVPCDQVQ^ KVQVELTVLDYDKLGKNEAIGRVAVGAAAGGAGLRHWADMLANPRRPIAQWHSLRPPDRVRLLPAP - start1 CACACGCGCGCACACGCACACGGGCACACACGCGCGCACGGGATCCTGCTCCGCTCCGCGGCTCCCCCGC CCCGGAGAGCTCCGCGATCAGCACCCGGGACAGCGCCACCGCCCACGTGCAGGGGGTGGGGTCCGGGCGG GGCTGGCGCCTCGGCGTCTCCCGGGAGTGTCCCGTCCAGCCGCCGAGCAG ac010327.8 (73752-73563) - start2 CCCAGTCGGGCTATTGGGGGGTTCCCAGGCACCGGTGGGCCCCGGAGCGAGCCTGCCCCGCCGGGACTCC GCGTCTGTGCGTCAGCCCCGCCCGTTGTCCTGGCAACAACCCGTTGCCCGGGCAACCAGCTTTGCTCTCA CCCCGCTTGAGAGGAGCCCGGCTGTTGCTCTGGGCAACGCGGTCTGCTGGTTCCCACGTCTGCCTTCGCC CGCTTCCGGTTCAGACCCTGCGGAGGGGCGAGGACGAGGCAGAAGTCAGCGGGATGCCTGTGGGGCCGTG GAGGAAGAGGGTATCCCTTTAGGATGGAACTAGGTCCTGGACACCCCCTCTCAAGTGCGGGGAGGCTGAT ACTACAACTCCCAGCATGACTCGCGGTGGCTGTCCGGTTTCTGCGCGGCTGTTCGCGCAAAGGCCTCATG GGAGTTGGAGTTCTTTGTTGTGCGTGGGGCTCAAAGGACGTCTGGGGTGGGAATGGGGGACTAG]GGTGC TTGAGTGTCTCTGCAGAAAAGACTCCAGGACCCCGCCACCATGTTCCCGGAGCCCCCAACCCCGGGGCCT *** CCATCGCCCGACACGCCTCCCGACTCCAGTCGCATCAGCCACGGCCCAG ac010327.8 (73016/72532-72409) phase +1 - [TGCCCCCCTGGGCCCTGGCCACCATCGTGCTGGTCTCAGGCCTCCTCATCTTCAGCTGCTGTTTCTGTCT CTACCGGAAGAGCTGTCGGAGGCGGACAGGCAAGAAGAGCCAGGCCCAAGCCCAGGTCCACCTTCAGGAA GTGAAGGGGCTGGGCCAGAGTTACATAGACAAG] ac010327.8 (71814-71642) phase 0 - GTGCAGCCAGAAGTAGAGGAGCTGGAGCCAGCACCATCCGGGCCAGGGCAGCAGGTGGCAGACAAGCATG AGCTAGGACGACTGCAGTACTCCCTGGATTATGACTTCCAGAGTGGCCAG ac010327.8 (69570-69451) phase 0 - CTGCTGGTGGGCATTCTGCAAGCAATGGGATTGGCAGCCTTGGATCTTGGTGGCTCCTCGGACCCCTATG TGCGGGTCTACCTGCTGCCGGACAAACGGAGGCGGTACGAGACCAAGGTGCATCGGCAGACGCTGAACCC TCACTTTGGGGAGACCTTCGCCTTCAAG ac010327.8 (69322-69155) phase 0 - GTCCCCTACGTGGAGCTGGGGGGCAGGGTGCTGGTCATGGCGGTGTACGACTTCGACCGCTTCTCTCGCA ATGACGCCATCGGGGAGGTGCGGGTCCCTATGAGCTCCGTGGACCTGGGGCGGCCAGTGCAGGCCTGGCG GGAGCTGCAGGCGGCTCCGCGGGAGGAG ac010327.8 (68785-68618) phase 0 - CAG]GAGAAGCTTGGGGACATCTGCTTCTCCCTCCGCTATGTCCCCACGGCCGGGAAGCTCACCGTCATCG TCCTGGAGGCTAAAAACCTGAAGAAGATGGACGTAGGAGGACTGTCAG ac010327.8 (68445/68442-68328) phase +1 - ATCCATACGTCAAGGTCCACCTGCTGCAGGGCGGCAAAAAGGTGCGGAAGAAGAAAACCACCATCAAGAA GAACACTCTGAACCCCTATTACAACGAAGCTTTCAGCTTCGAGGTGCCCTGTGACCAAGTCCAG ac010327.8 (68096-67963) phase 0 - AAGGTGCAGGTGGAGCTGACCGTGCTGGACTACGACAAGCTGGGCAAGAACGAGGCCATCGGGAGGGTGG CCGTGGGGGCGGCCGCCGGCGGGGCTGGCCTGCGGCACTGGGCGGACATGCTGGCCAACCCGCGGCGGCC CATTGCCCAGTGGCACTCGCTGCGGCCCCCGGACCGAGTGAGGCTGCTGCCTGCGCCCTGACTCCCACCC *** CAAGCCCCCGGCCAAGCCTGGACTCTAGCCCCTGACCCCAGACTCCCGAGACCGGCCAAAGCCAAGCCAG CCCCACCCTTAAGCTTCCTCTGACGGTTACCCTCCCCCCACCTTCCACCCCAACCATCTGAACCATTCCT GTCTTCTCACCCCCAACGATGCCAATCACGACAACTTTCCAGCACACTCCCCCGACCCTCGCGGACACAC CCAGATGCCCCAGGGACCCCGGGAAGGGAAGGCAGCCTGGTTTCTCCTGCCCCCGGGTCCTGCCCCCTGC TTTGACAATCAGCCATCCTCGTCTGCTCTCCTCTCTCTTCCAACACAGCCCATCCCTGCACTGCTCCTGG GGCCAAATAAATATTCAGCAGCTCCGGTG ac010327.8 (67130-66542) -------------------------------------------------------------------------------- 74. Homo syt6 Hssyt6 Abundance moderate Chromosome 1 Size >62.3 Kb Transcript complexity affecting 5'UTS, Nterm and Cterm MPWRNKEASSPSSANPPLEALQSPSFRGNMADKLKDPSTLGFLEAAVKISHTSPDIPAEVQMSV KEHIMRHTRLQRQTTEPASST^ RHTSFKRHLPRQMHVSSVDYGNELPPAAEQPTSIGRIKP ELYKQKSVDGEDAKSEATKSCGKINFSLRYDYETETLIVRILKAFDLPAKDFCGSSDPYV KIYLLPDRKCKLQTRVHRKTLNPTFDENFHFPVPYEELADRKLHLSVFDFDRFSRHDMIG EVILDNLFEASDLSRETSIWKDIQYATS^ ESVDLGEIMFSLCYLPTAGRLTLTVIKCRNLKAMDITGYS^ DPYVKVSLLCDGRRLKKKKTTIKKNTLNPVYNEAIIFDIPPENMDQVSLLISVMDYD^ RVGHNEIIGVCRVGITAEGLGRDHWNEMLAYPRKPIAHWHSLVE[VKKSFKE ^GNPRL alt.Cterm ^WQGRAASFDSESSCPSPKPPPTP alt.Cterm - start 1 TGGGGCCGTCGTGCCCCGCCCCAGTGCGGCCGGGGCGCGGGTTCGAGCTGCTGCTCGGCAAGCCTGGGTG TCTAGGGCATGAGCGGAGTGTGGGGGGCCGGCGGGCCTCGGTGCCAGGAGGCGCTCGCGGTCCTCGCCTC GCTGTGCCGGGCCCGGCCGCCCCCTCTCGGGCTGGACGTGGAGACTTGTCGGAGCTTCGAGCTGCAGCCC CCAGAGCGGAGTCCCAGCGCGGCAGGCGCAG al162594.13 (89017-88777) - start2 AAGGACCAGGACGCCGGGGTTCCAGGAGACTCTGCAGGCTCCATCCCTCCTTATTCCCCCACCCCGACCC CAGTAGCGCTGGGCCTAGGAGCACTCGGGAGTTGCTCAGTGGCTCTGCACCGCTGGCGCGGGAAGGGGAG AAAGGGGCTGCCAGAGGCGGGAATTTGGTCCCCACGCGCTGCTCCAGGGACGAGAAGCCAGGGACCGGCG GTTCTGGGAGCAG al162594.13 (87607-87385) - CTGTGCTGGATGCCCTGGAGGAACAAGGAGGCCTCCAGTCCCTCTTCTGCTAATCCCCCCTTGGAAGCCC *** TCCAGAGCCCCAGCTTCAGAGGCAACATGGCGGACAAGCTGAAGGACCCCAGCACCCTGGGCTTCCTGGA GGCGGCCGTGAAGATCAGCCACACGTCCCCAGATATCCCAGCTGAGGTGCAGATGTCGGTCAAGGAGCAC ATCATGCGTCACACCCGGCTGCAGCGGCAAACTACAGAGCCAGCGTCATCCACCAG al162594.13 (75047-74782) phase +2 - GCACACGTCCTTCAAGCGCCACCTGCCAAGGCAGATGCATGTCTCCAGTGTAGACTATGGCAATGAGCTT CCACCAGCAGCAGAGCAGCCCACCAGCATTGGCCGCATCAAGCCTGAGCTCTACAAGCAGAAGTCGGTGG ATGGGGAGGATGCCAAGTCTGAGGCCACCAAGAGCTGCGGGAAGATCAACTTCAGCCTACGCTACGATTA CGAGACCGAGACCCTGATTGTGCGTATCCTGAAGGCTTTTGACCTCCCTGCCAAGGACTTTTGTGGAAGC TCTGACCCTTATGTCAAGATCTACCTCCTGCCTGACCGCAAATGCAAGCTGCAGACCCGGGTGCACCGCA AGACCCTGAACCCCACCTTTGATGAGAACTTCCACTTCCCTGTGCCCTATGAGGAGCTGGCTGACCGCAA GCTGCATCTCAGTGTCTTCGACTTTGACCGCTTCTCCCGCCATGACATGATTGGCGAGGTCATCCTGGAC AACCTCTTTGAGGCCTCTGACCTGTCTCGGGAAACCTCCATCTGGAAGGATATCCAATATGCCACAAGT al162594.13 (73220-72662) phase 0 - GAAAGCGTGGACTTGGGAGAGATCATGTTCTCCCTTTGCTACCTGCCCACTGCAGGCAGGCTCACCCTCA CAGTGATTAAGTGTCGGAACCTCAAGGCGATGGACATCACAGGCTATTCAG al162594.13 (38888-38768) phase +1 - ATCCCTATGTGAAAGTGTCCTTGCTCTGTGATGGGCGGAGGCTGAAGAAGAAGAAAACAACCATAAAGAA AAACACTCTCAATCCTGTCTACAATGAGGCCATCATCTTTGACATTCCCCCGGAAAACATGGATCAAGTC AGCCTGCTCATCTCAGTCATGGACTATGATCG al162594.13 (34432-34261) phase +2 - AGTGGGCCACAATGAGATCATAGGAGTCTGTCGTGTGGGGATCACTGCTGAAGGCCTGGGCAGGGACCAC TGGAACGAGATGCTGGCATACCCCCGGAAGCCCATCGCACACTGGCACTCCTTGGTGGAG[GTAAAGAAAT CCTTCAAAGAG 1st pickup less common al162594.13 (33044/32914-32894) phase 0 - [GGAAACCCTCGGTTGTGATTTCATTCACGTGGATGCTGCAAGCAGAGAGACTGCCACCTGGAGTTAGGA] *** al162594.13 (28970-28902) - TGGCAGGGCCGAGCTGCTAGCTTCGACAGTGAGAGCTCGTGCCCATCTCCGAAACCACCTCCAACACCA TGAGATGTGCAGCCAAATAACACAAATGGGACTCAGCAATGTTCTCTTTGCACTTGTTCAACCGTCTAAAC *** AGTGTTGTGCAGTCGCAGTGGCGGCAGCAGCGGCAGCCGTCCGTCACTCCAGAGTCTTACCTGCTCCTGT GTAGGTCAAAGCTGAGACACTTGTCATGTGGTCAGATCTGTCTTAGTCTTTTGTGTCTCCCAAGGTGATG TTTTTGTGGTTTTTCACTTTTTATGGGTCTGCTGGTAAGAAAAGGGAAAAAAAAAAAGAGTAGGAAAAGA CAAAGGGTGGAAAGCCCAGAAGTTGGTTCTAGAAAATACAAGGTACAGTTTTTTGGAAAGAGGTGGATTG AGTTTCTGAAATGCTGCGTCTCCAGCAAGCTCCACAACCCTGGAAAAGGAGGAGGCGTGGTGGGACTGCG GCTGCATTTTCAGTGCCCTGCAGGAATGGGGTGAATCCATGGAAGAGCCTTTGTGAGGTGAATTACTAGT CTTTGAAGCTCTTCGCTGGCAGGACATAAACCACGCTGGGACCCTCAGTCCCGTGTTGAAATCACAAGAC CTCTGAGGCGCTTGTGAGCCTTCAGCTGATGTGCAGGGTTCCTCGCTCCCCTTCCTCGCTGGCTTTCCCC ATGAATTGAAAACGTCTTGATTCCTCATGGGAACTTAGTCACTTTCTTTAGGAATGATTCAGTTCAGCCG AAACTAAACACGCCATATGTTTTCTGATGCGCCACAGTTAATGATCACATTTGTTTGAAAACAGGATCTT TGTCCTCAGAAATAATCTTGATTGTAAAGTAAGAGAGAAACATATGTTCTGGAATGATTTCTGCATTATA CATAGCTTTATAATTCCATGAAGTATCAAGCTGCTGTTTAAAATGCCTAAACAGATTAAAGAAAAACCTA GATTAAATGTTCTTTTCCAAATGGGGAGTTTTGAAATCCAAATAGCAGTTTGAGTCCATCTTTCTATGAA GAGTATGTTTTTGATTGAAACCGAGTCAGCGTAAGCCTATTTCAGCCCCTTTGGCTCTTTGACAATATTC ATCTTAAACTTTAGTTCTATAAATTACTAAGTACTTCAGTGTTGTTTGTTTCAGTGGTTGTGAGGGTTTC TTGTTTCCTTTAGATCTTTACCTTAGGCCAAACTCAGTTTAGGAAAAAAAAAATTGTTTGAACTATTCTG TGTTGTAATAGCACATTTCTGTTGAGTTAATAGTGGTCTTCCCACCAACCCCTAAAACCAGGTTGATTTG CTCAATCTCAGTTTGTATAACCCCAGTAAGCGCATGGAGGTGAGTTTCTACTTCGACTTGTGGCGACACA GTGCCAGTTTCCTGAGCTGTGTGTACTACTTGCAAGAGGCAAGTCTGCTGAAGAACCCCTTCTTTTAACA GTGGAAAATCAAGAACAGAAAATCTGTTCACACACCTGTGTCTTATTCTTTATATATGCTACATGGTAGA GGAGCAGCGACCAATAAAGTATCCCTCATTTT al162594.13 (27249-25678) -------------------------------------------------------------------------------- 75. Homo syt7 Hssyt7 Chromosome 11 Abundance moderate Size > 65.5 Kb Transcript complexity affecting Nterm MYRDPEAASP^ GAPSRDVLLVSAIITVSLSVTVVLCGLCHWCQRKL^ GKRYKNSLETVGTPDSGRGRSEKKAI^ [NDLDRDFWNNNESTVQQKWSSYPPKEFILNISPYAPYGDPRLSL^] - translation of 3(+1),3a(0),3b(0),3c(0),3d alternative phase product: MATHDCPS^TRSSSVVNPSLSCGIELEVAALPQPPPPLPQAVGRGPPSVVV^WHPPVGRQSGRRGGAGGGAG RPAGGEAGTGAATRRGRLEKRRGCPQRAGQRWQGGERPLADGAEPPGRREAQLVQ^FRGLHPVHGHYP - [NGTLLSGAKVAAAAGLAVEREGRLGEKPAPVPPPGEDALRSGGAAPSEPGSGGKAGRGRWRTVQSHLAAGKLNLS^] [NFEDSTLSTATTLESIPSSTGEPKCQRPRTLMRQQSLQQPLSQHQRGRQPSQPTTSQSLGQLQAHMASAP - alt.Nterm GPNPRAYGRGQARQGTSAGSKYRAAGGRSRSNPGSWDHVVGQIRNRGLDMKSF^] [LEGRMVVLSLVLGLSEQDDFANIPDLQNPGTQQNQNAQGDK^] - alt.Nterm RLPAGGKAVNTAPVPGQTPHDESDRRTEPRSSVSDLVNSLTSEMLM^ - alt.Nterm LSPGSEEDEAHEGCSRENLGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLL PDKKHKLETKVKRKNLNPHWNETFLFE^ GFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPCSDGS^ GSRGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTS^ DPYVKVWLMYKDKRVEKKKTVTMKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGK^ IYLSWKSGPGEVKHWKDMIARPRQPVAQWHQLKA Exon numbering according to Craxton and Goedert 1999 - 1: GCGGCCGCGGGCGGCTCTGAGGAGCCCGGAGGGAACCGGCGACGAGGGGACCATGTACCGGGACCCGGAG GCGGCCAGCCCAG *** ap003559.3 (174673-174591) phase +1 - 2: GGGCGCCCTCGCGCGACGTCCTGCTGGTCTCTGCCATCATCACCGTCAGCCTTAGCGTCACTGTCGTCCT CTGCGGCCTCTGCCACTGGTGTCAGCGCAAACTG ap003559.3 (150008-149905) phase 0 - 3: GGCAAACGCTACAAGAATTCCTTGGAGACGGTGGGCACGCCAGACTCAGGGCGTGGGCGCAGTGAGAAGA AGGCTATCAA ap003559.3 (145264-145185) phase +2 - 3a: [TGATCTAGACAGAGACTTTTGGAATAACAATGAGAGCACAGTGCAGCAGAAATGGAGCTCCTACCCTCCC AAGGAGTTTATTCTAAACATTTCACCCTACGCCCCTTATGGCGACCCACGACTGTCCCTCAA] *** start alternative phase product ap003559.3 (141109-140978) phase +2/+1 - 3b: [CCCGCTCTTCCTCCGTCGTTAACCCTTCGTTGTCCTGTGGGATAGAGTTGGAGGTGGCTGCCCTCCCCCA ACCCCCGCCGCCCCTGCCCCAGGCGGTGGGGAGGGGCCCCCCCTCCGTTGTCGTG] ap003559.3 (140460-140336) phase 0 alternative phase product only - 3c: [TGGCACCCTCCTGTCGGGCGCCAAAGTGGCCGCCGCGGCGGGGCTGGCGGTGGAGCGGGAAGGCCGGCTG GGGGAGAAGCCGGCACCGGTGCCGCCACCCGGAGAGGACGCCTTGAGAAGCGGCGGGGCTGCCCCCAGCG AGCCGGGCAGCGGTGGCAAGGCGGGGAGAGGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCGCAGGGAA GCTCAACTTGTCCAA] ap003559.3 (140056-139832) phase +2/0 - 3d: predicted from Mus transcripts [TTTCGAGGACTCCACCCTGTCCACGGCCACTACCCTTGAGTCTATCCCCAGCTCCACGGGAGAGCCGAAA *** end alternative phase product TGCCAGCGACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCAGCACCAGCGGGGCC *** GGCAGCCCAGCCAGCCCACCACCAGCCAGAGCCTGGGCCAGCTGCAGGCCCACATGGCCTCGGCACCAGG CCCCAACCCCCGGGCCTATGGCCGGGGCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCG GCAGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGGGACCACGTGGTGGGGCAGATTCGAAACCGAGGCT TGGACATGAAATCCTTCCT] ap003559.3 (136380-136012) phase +2 - 3e: [GGAAGGCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTTCGGAACAGGATGACTTTGCCAATATCCCT GACCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGCTCAGGGGGACAAGAG] ap003559.3 (132067-131945) phase +2 - 4: GTTGCCTGCAGGAGGGAAGGCGGTGAACACAGCCCCCGTGCCAGGCCAGACACCCCACGATGAGTCCGAC CGCCGGACCGAGCCACGTTCCTCCGTCTCAGACCTCGTCAACTCCCTCACCAGCGAGATGCTCATG ap003559.3 (126921-126786) phase 0 - 5: CTCTCCCCAGGCTCCGAGGAGGATGAGGCCCACGAGGGTTGCAGCCGAGAGAACCTGGGCCGGATCCAGT TCAGTGTCGGCTACAACTTCCAGGAGTCCACGCTCACCGTGAAGATCATGAAGGCCCAGGAGCTGCCGGC CAAGGACTTCAGCGGCACCAGCGACCCCTTCGTCAAGATCTACCTGCTGCCCGACAAGAAGCACAAGCTG GAGACCAAGGTGAAGCGGAAGAACCTGAACCCCCACTGGAACGAGACCTTCCTCTTTGAAG ap003559.3 (121981-121711) phase +1 - 6: GTTTTCCCTATGAGAAGGTGGTGCAGAGGATCCTCTACCTCCAAGTCCTGGACTATGACCGCTTCAGCCG CAACGACCCCATTGGGGAGGTGTCCATCCCCCTTAACAAGGTGGACCTGACCCAGATGCAGACCTTCTGG AAGGATCTGAAGCCATGCAGCGATGGGAGT ap003559.3 (118328-118159) phase 0 - 7: GGGAGCCGAGGGGAGCTGCTCTTGTCTCTCTGCTACAACCCCTCTGCCAACTCCATCATCGTGAACATCA TCAAAGCCCGGAACCTCAAAGCCATGGACATCGGGGGCACATCAG ap003559.3 (117737-117623) phase +1 - 8: ACCCCTACGTGAAGGTATGGCTGATGTACAAGGACAAGCGGGTGGAGAAGAAGAAGACGGTGACGATGAA GAGGAACCTGAACCCCATCTTCAATGAGTCCTTCGCCTTCGATATCCCCACGGAGAAGCTGAGGGAGACG ACCATCATCATCACTGTCATGGACAAGGACAAGCTCAGCCGCAATGACGTCATCGGCAAG ap003559.3 (117070-116871) phase 0 - 9: ATCTACCTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCCGGC AGCCCGTGGCCCAGTGGCACCAGCTGAAGGCCTGAGTGGGGCCAAGGGAGGCCCAGGGGGCCGAGGGCCC *** AGGTCCCCATCATGCCCTCACCACTTTATGCACAACGCCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAG GACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC CATCCCCCACAGTCCAGCTCCGGGGAAGGGGCTCTGGGAGGCATTTTCCTGCTTTGCCCCTTTTCTTCCT GACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAG GCCCGCCAGGTGGGCATGGTCCCCCATTTTCTTTAAGGCAGCACCTGGAGTGGAGAGAGGCCACTCCCTC TCCAGCCCCCGATGTGGACCCGGGGAGGGGAGGCTGAGGCGTTTGGCCCCGGCCTGGCCAGGAGAGGCCC ATCCCCAGGGCAGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGT CCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTGTCCATTGTGTGTGTGCGTGGGGACAGAGGCCTGGAAA TGCGGAGGACTATACAGAGAAGGCAGGTTTTGTGAAGGCCAGGCAGGGTTGGAGGCCGGGGGTGTGAGAG GAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGGCAGAGGTCAGAAACAGAAGAGCTGCAGTTGCTGGA GCTGGGCTGAGAACTGGGCTGCCTCCTGCCATCCCCCCGTCTCCTCCCCTTCTCCCCTTGGTGCCGCCCT CTGCTCAGAATCTGAAGTAGTTCCCTCCTCAGCAATTTCATCTCTTGAACACTGACTCACACCTTTTAGG CACCTACTGTGTGCATAGCATTCCACCAGGACTCATCTCCCTTCCTTCTCAGGGGGTCCCGAGCCCCGAC TAGCTTTGCCCTAACTCCTTCATCAAAAGACCCCCCGCCAGCTTCCCACACCTCATACGCAGCCACATCT GCCCTATTCTCCATGCTTTCCAGCTTGCCTGCCCTTCCTCATCTCTCCCTGCCTGTGCAGACCTCCACCC TTCTTTCCTCCACCCCTCCATCCCCCAATGCTTGTAGACCTTCCATTCATTCCGTCTCATCGTGCGTGGT CTCTGATCGTCCATCACCTGACCTTCTCCAGGACTGTCTTCTCACCCTTCCCCACTCCCTGGTCCCCGGG AGCAGCTCCTTCTGCCCGACTCACTCACAGTGCAGGGAAAGGAGGCAGGGAAAAGACCAGGATTCTGTGA GTTCTGAGGTTGCCACACACAAAGAAGCTGTGGTTTCTCTGCCTCGGCCACTGATGAGACTAAAACTGGC TTCCCCTTGGAGACGGCAGATTTCAGGCTGATCCCTGCTTAAGCCCTCTCATCCCCACGCTGGTCCTGGT ATTGATACAAGACCCAGCTGGTGACAAAGCCTCCAATCCTGGGGGTCCACGAGCCTGGGCCTGACATTCC CAGAACTACCGCCAGGTGGCGCCAGGCCCCCACAGTCTGTGGCCGTGGTCTTAGCCCCCAGTTCCACTCT GGATGGGCCTGTGACACCCCAAAGAGAAGAAGGGGACTCTGGATAGGGTCCCCACATCCAGGGCGTGGGG AGACCATTGGCATTTGGGAACCATTTTCCTTCGAACGGCTTCCCCTTGAGCTGAGCATTCTGCTTGCTGC AGTAGACGGGTCGCCTTTTGCCCATACCGAAATTTTCTGAAATTAAATCGCACACCCCCACCATTTCCTC TCCCTGGGATCTGGAGGAACATCATACATAGTAGGTGAATCGTTTTGTAGAGTGAAGAATGCTAATGTAA AGCAAATAGTCACCCACGTTCCTTGTAAATCCAAATGTTTCTATATTGTAGCTTTGCTTAAAATGGGGTC GGCCCCAACTGCATCCTCCTCTTTGGCGGGCTGGGGAGCGGCCCCCAGCCGGGACGGGAGGGCAGCGACC CCGAGGCCTCGTGGACGTGGGAGAGAGTGTGGTGGGAAGTCTTGAGCGGAGGAGGGGATCTGCCCTTCTC CACTCCTCTCTTGGATCCGCCTCGGTTTCCTGTCCCCCCACCACCCGCCTGCCCCGCGGAAGACCGCCCA GTGAGCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATCGAGTGGGCGGGG CAACGGCTCCCCATTTTTCCCGAGCCCCGCCCACAGAGCTCTTAGCCAATCCTATGCAGAGAGCATCTCC TGGCAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCACATTAGCGACCAGGCTTGGGCTTCCCCAGCGC CCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCAAGCGGTGGGCCGAGGGCC GGGTAGGCTAGCACGGGAGGTAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCA GAGAATGGGGGAACTTGAGGGTGGGGGGAGGGCACCGGAGCCTTGCCACCATCCCAGGACTTTGGGCAAG TCACCCGCACTCCCTGGGCCTCGGTTTCCCCATCTGTAAAATGATGGTAATAATACTTCACCTACCTCAT AGGGGAGGTTGTGAGGCCACCATCACCTGACCTGGGGGTCAAGGCAGGAGGACTCCGAAGGTGCTACCCG TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCCACAGAGCCTCCAGAGC TAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTCTGCC ATCTTTGTGGGTGCCCTAGACTTAGTCCTTATCTTGTCCTGGTTTCCTTTCTTGTGACCATCTCCCCATG AAAGTGCTGTACAAATTCCACCCGCCCCAGGACCCCCGCACCTGCCCTCTGGCACCAGATGCCAGGGAAG GGACAGAGGAAAACAGCCACAAACAAGCCAGGGGGGCTCCCCGGAGCCCCAGGGGTGGGGATTGGTGGCC ACTGTTTGTATGTTCTTGAGTGCAAGTGTTTTATAAAAAATAAAACAAAAACCCACCATCACAAAAAAAA AAATTTTGCAGCGAAGAGAAATGAAGAAAAACTGAAGAAAAAAAAAAAACAGGAAAAAAAGAACCATACA AAATTTTTCCACCACACATACCCTCTAAGCCAGCAAGATTTCCTCTTTGCAAAATCATATTTTTGTGGGA ATGGGCCCTGCTTTTTGTGGCAAGGCCTGTTCTGATTAATAAAGGATCGTGAAAAAGTA ap003559.3 (112599-109181) -------------------------------------------------------------------------------- 76. Homo syt8 Hssyt8 Abundance low Chromosome 11 Size >8.9 Kb Transcript complexity affecting 5'UTS, Nterm, many transcripts un/part-spliced MLHLHGWQTM^ QGRKMGHPPVSPSAPAPAGTTAIPGLIPDLVAGTP^ - alt.Nterm WPRWALIAGALAAGVLLVSCLLCAACCCCRRHRKKPRDKESVGLGSARGTTTTHL^ VQPDVDGLESSPGDAQQWGRLQLSLEFDFGSQE^ IRVGLRQAADLRPGGTVDPYARVSVSTQAGHRHETKVHRGTLCPVFDETCCFH^ IPQAELPGATLQVQLFNFKRFSGHEPLGELRLPLGTVDLQHVLEHWYLLGPPAATQ^ PEQVGELCFSLRYVPSSGRLTVVVLEARGLRPGLA^ EPYVKVQLMLNQRKWKKRKTATKKGMAAPYFNEAFTFLVPFSQVQ^ NVDLVLAVWDRSLPLRTEPVGKVHLGARASGQPLQHWADMLAHARRPIAQRHPLRPAREVDRMLALQPRLRLRLPLPHS - start1 GGACTGGGGGCACCTTTGCAGATGTGTGCAATATCACCCACACTCTCAGAGGATTCCAGACACACACCAC TCAGAAATGTGGGCTAGGAGCACCCGCTGCACCTGCGCTGAGAGAGCTGCAGAAAGGGTTACCAGCCCCT CGGGTGGAAGGAGACAGCCGGAGCTCTCAGG ac139143.5 (16138-15968) - start2 CCGGTTTCCAGAGCCTTAAGGAGCCCGCTGGAGCGGTGGCCAGGG ac139143.5 (12368-12324) atypical gg intron donor - start3 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGGAGTCATGGCAGGGTCCCTTTCTGTCTGTCT CCTTGCTCTGCCCCAGACTGGGGGGCTGCAGAGGTGAGGGTATCTGGCCTCAACAGCTGCTTATTCCCGA TGGGATGGCCTGGGCTGGGCCCCTGAGGCCAGGCTGACTTGGACATGGCAAGAGGGGTCCCAGGCTCTTG TGGGCAAAGCAGGGGAGGCGCCAATGTGGAGGAACAGAGTCTCCTGGCTGGCTGCTGCTCTCTGGAGCGG GTGGAGTCAGGGAAGAGCTGAGCTGGGGAGTCACCCTGGGCCTGGGGTCACCGTAGGCCCCATGTAGCAC CCTGGTTCCCCTGCCTGTAGGTGACAGGAGCCAGCCCAGCCAGGTGTGCTCCCTCCCCAGGCCCTAGGCA GGCGGGTACAGGGGCCAGCAGCTGCGCCCGCCCCACCTTCCTTCCCACCCACATGCCGAAGGGTGGCCAG GCAGGCAGGTGGACGAGTCCAGGCAGCGGCTGAGTCAGTGTGTGTGGAATGTTCTGGCCGCTCCCAGCTG CACCCTGCCCCTACCTGCCACCACCTCACCTTCATCCTCAGGCGCTGCGGCCCTGAGCCCCTGCCAGGAA TGCACCTTTAGCCCAGGCCTGCTCAGTGAGCTCCGCCGACAGCCAGCCCTGCTCCTCCCGCCATGACCCT GCAGACCCCTCTGGGCTTCCAAGTTCCTGGGGGCTGCAGTGAACATGCTCCACCTGCATGGCTGGCAAAC *** CATG ac139143.5 (10861-10088) phase 0 - start4 GGGCCTGGGCAGCTAAGCTGGAGCTTTGGCCAGGGTCCAGAGCCTCCCTCCCTTCAGCTTCCTGCTGCAC AGAACCCTCGCCCCTGGCCACCCCGTGCTGCCTCCTTGCCCTGGCAGACCCAGCACTGGCTGCTGCTAGT CAGATGGGGTAGCGGGCAGGGGCCGGAGGGGCCACCCTCCCAGCTGACCCAGCCTCCTGGGCCGCTTCTT CCAAACCAG]CAGGGTAGAAAGATGGGGCACCCACCAGTCTCTCCCAGTGCCCCGGCCCCAGCTGGCACC *** ACAGCTATACCTGGGCTTATTCCAGACCTTGTCGCCGGGACCCCCT ac139143.5 (9814/9595-9490) phase +1 - GGCCCCGCTGGGCTCTCATTGCCGGCGCCCTTGCCGCGGGCGTCCTCCTCGTCTCCTGCCTCCTCTGTGC TGCCTGCTGCTGCTGCCGCCGCCACAGGAAGAAGCCCAGGGACAAGGAGTCCGTGGGTCTGGGCAGTGCC CGCGGCACCACCACCACCCACCTG ac139143.5 (9393-9230) phase 0 - GTGCAACCTGATGTGGATGGCCTGGAGTCCAGCCCGGGGGATGCTCAGCAATGGGGGCGCCTGCAGCTCT CCCTGGAGTTCGACTTTGGAAGCCAGGAG ac139143.5 (8803-8705) phase 0 - ATCAGGGTGGGCCTGAGGCAGGCAGCCGACCTGAGGCCTGGGGGCACCGTGGACCCCTATGCCCGGGTCA GCGTCTCCACCCAGGCCGGACACAGACATGAGACAAAAGTGCACCGAGGCACGCTCTGCCCCGTGTTTGA CGAGACCTGCTGCTTCCAC ac139143.5 (8563-8405) phase 0 - ATCCCGCAGGCGGAGCTGCCAGGGGCCACCCTGCAGGTGCAGCTTTTCAACTTCAAGCGCTTCTCGGGGC ATGAGCCCCTGGGTGAGCTCCGTCTGCCACTGGGCACCGTGGATCTGCAGCATGTTCTGGAGCACTGGTA CCTGCTGGGCCCGCCGGCTGCCACTCAG ac139143.5 (8264-8097) phase 0 - CCCGAGCAGGTCGGGGAGCTGTGCTTCTCTCTCCGGTACGTGCCCAGCTCAGGCCGGCTGACCGTGGTGG TGCTGGAGGCTCGAGGCCTGCGTCCAGGACTTGCAG ac139143.5 (7933-7828) phase +1 - AGCCCTACGTGAAGGTCCAGCTCATGCTGAACCAGAGGAAGTGGAAGAAGAGAAAGACAGCCACCAAAAA GGGCATGGCGGCCCCCTACTTCAATGAGGCCTTCACCTTCCTGGTGCCCTTCAGCCAGGTCCAG ac139143.5 (7732-7599) phase 0 - AATGTGGACCTGGTGCTGGCTGTCTGGGACCGCAGCCTGCCGCTCCGAACTGAGCCCGTAGGCAAGGTGC ACCTGGGTGCCCGGGCCTCGGGGCAGCCCCTGCAGCACTGGGCAGACATGCTGGCCCACGCCCGGCGGCC CATTGCCCAGCGGCACCCCCTGCGGCCAGCCAGGGAGGTGGACCGCATGCTGGCCCTGCAGCCCCGCCTT CGCCTGCGCCTGCCCTTGCCCCACTCCTGAATGCACCACATGCCTCTGTCTCCCCGCTGAGCCCAGGCAC *** TTGCCCAGGCCGCCCTGCAGGACCACTGCAATAAACGCCTTCTCCTGCCA ac139143.5 (7497-7168) -------------------------------------------------------------------------------- 77. Homo syt9 (syt5) Hssyt9 Abundance low Chromosome 11 Size >231 Kb Transcript complexity affecting Nterm and Cterm Antisense overlapping gene MLAKVVEGDLAFKGGR^ MPGARDALCHQALQLLAELCARGALEHDSCQDFIYHLRDRARPRLRDP^ - alt.Nterm DISVSLLTLVVTACGLALFGVSLFVSWKLCWVPWRERGLPSGSKDNNQEPLNYMDTETNEQENSEDFLD PPTPCPDSSMKISHTSPDIPLSTQTGIQENCAHGVRVQRQVTEPTSSA^ (if below skipped, then: RTTWIWES-end) RHNSIRRQLNLSNPDFNIQQLQKQEQLTGIGRIKPELYKQRSLDNDDGRRSNSKACGKLNFILKYDCDL EQLIVKIHKAVNLPAKDFSGTSDPYVKIYLLPDRKTKHQTKVHRKTLNPVFDEVFLFPVPYNDLEARKL HFSVYDFDRFSRHDLIGQVVVDHFLDLADFPRECILWKDIEYVTN^ (if alt.exon included, then: ILS-end) DNVDLGELMFSLCYLPTAGRLTITIIKARNLKAMDITGAS^ - alt.Nterm DPYVKVSLMCDGRRLKKRKTSTKRNTLNPVYNEAIVFDVPPENIDQIHLSIAVMDYD^ RVGHNEIIGVCQVGNEAERLGRDHWSEMLSYPRKPIAHWHSLVE ^VSWCPGFLCILAALSGVLEAALPSSNLAQP ^KR alt.Cterm - start1 GCAGTCCTGAGCTTTGTCAACATGATCCTCCTGCCTGAGACTTCAATTTGGGAAAGAATGATATGAAGAA GCCAGTAATGCAGAGAACAAATGCTGGCGAAGGTGGTGGAGGGAGATTTAGCTTTCAAAGGAGGCAGAG *** ac027804.7 123197-123335 phase +1 - start2 GGAGGGACCGGGCGGGAGAGAGAGAAAGCCTGACCGACCGGCTGGCGAAGAGCTGCATGCAACCGGTGGG AGGCCGGGCCGGCTGGGTCTGGGGCTCGGGCTCAGGCTCGCACCGTTTCTCGGCAGGTCCCTGGCGGTGA GCGCGGACGGCCCGGAGGCGGCGGCTCTGAGCTGGCAGGCGGAGGGCTGTCTCCTGCGCCCGCCTGCCCG GCGCGGTCCGAGGATGCGGGGGGGCGATGCCCGGGGCCAGGGACGCGCTCTGTCACCAGGCGCTGCAGCT *** GCTGGCCGAGCTCTGTGCCCGTGGGGCCCTGGAGCACGACAGCTGCCAGGATTTCATTTACCACCTGCGG GACCGTGCCAGACCCCGGCTCCGCGACCCAG ac027804.7 136370-136750 phase +1 - ATATCTCAGTGAGCCTGCTGACCCTTGTGGTCACTGCCTGTGGTCTCGCTCTCTTTGGCGTGTCTCTCTT CGTATCTTGGAAACTCTGCTGGGTTCCGTGGCGAGAACGAGGCCTGCCCTCTGGTAGCAAAGACAACAAC CAGGAGCCCCTTAACTACATGGACACAGAGACCAATGAGCAGGAGAACAGTGAGGACTTCCTAGATCCTC CCACGCCCTGCCCTGACTCCTCCATGAAGATCAGCCACACCTCCCCTGACATTCCCCTCTCCACCCAGAC GGGGATCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGCC CG ac060799.6 30964-31315 phase +2 - [GCATAATTCAATCCGAAGACAACTCAACTTGTCAAACCCGGACTTCAATATCCAGCAGCTTCAAAAACAG GAACAGTTGACTGGAATTGGTAGAATTAAACCAGAGTTATATAAGCAGAGGTCATTGGATAATGATGACG GGAGACGGAGTAACAGCAAGGCTTGTGGGAAACTGAACTTCATTTTAAAATATGACTGTGACTTAGAGCA GCTCATAGTGAAGATTCACAAAGCTGTCAATTTGCCCGCCAAGGACTTTTCTGGGACTTCAGATCCTTAT GTCAAGATCTATTTGCTTCCTGATCGGAAAACAAAACACCAGACTAAAGTTCACAGAAAGACCCTGAACC CTGTGTTTGATGAAGTGTTTTTATTTCCGGTTCCCTACAATGACCTTGAAGCACGGAAGCTTCACTTCTC TGTGTACGACTTTGACAGGTTCTCTCGTCATGACTTAATCGGCCAAGTGGTGGTGGATCACTTCCTAGAC TTGGCTGATTTCCCCAGGGAGTGCATCCTTTGGAAGGATATCGAATATGTCACCAAT] ac060799.6 41320-41866 phase 0 - not open [ATTCTTAGCTAGCCCCTAAGAGACAGCAGGTGTTATCTGTCCTCCGTACCACATTTTCTTTAGAGCTTTT TCAGGTTGTTTGTGCTGAATGGAACCTGGCATTCTATTAACTGTAGTCTGCAGCTAAGAGACCATTACCT GACTCTGACAGCA] ac060799.6 42110-42262 - GACAACGTGGATCTGGGAGAGCTGATGTTTTCCCTGTGCTATCTTCCAACGGCTGGCAGGCTGACCATTA *** CCATTATAAAAGCAAGGAATTTAAAGGCAATGGACATAACAGGAGCATCAG ac060799.6 143967-144087 phase +1 - ATCCCTATGTGAAAGTCTCGCTGATGTGTGATGGCAGACGACTGAAGAAGAGGAAAACATCCACCAAGAG GAACACCTTGAATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACATTGACCAAATC CACTTGTCCATAGCAGTCATGGACTATGACCG ac060799.6 145882-146053 phase +2 - TGTAGGTCACAATGAGATCATCGGCGTGTGTCAAGTAGGCAACGAGGCTGAGAGGCTGGGCAGAGACCAC TGGAGTGAAATGTTGTCATATCCTCGGAAGCCCATTGCACACTGGCATTCCCTGGTGGAG ac060799.6 148431-148560 phase 0 - [GTCTCTTGGTGCCCAGGTTTTCTCTGCATACTTGCTGCACTCTCTGGTGTCCTGGAAGCAGCTC TGCCCTCTTCCAACCTGGCTCAGCCTTGAAAGGGCCCCTTTTTTCACATTGGTGCAG] *** ac107884.15 (150166-150046) - joined from above exon [GGGAGGAAGAAGGGTTTCCAGCTGCAAGGAGAGAGCAGCGTGCAGTGACAGTGAGGCACCAGGATGTAG AACAATGCTGCCAGAACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTG ATGGGTCCTAGTGGGCCTCTGTGCTGGTCGTGACCGACTTTTCTTCAATGATCCAGTGGAGGCTGCAATG TATTTTGCTTAAAACTACAGCTGGTTTATAATTTTGGCCTCAGACAGTAATTACAGCTGCTGGGGCTCCT TGGAGAGATAATTACGGAAAGAATTCAGCATATTCATTTTATCTACACACTTAACCATCAATTAAATCAT TACCATCT] ac107884.15 (144523-144167) - AAACGATGACCATGGGTAAGAGGACTGCTTGTGCCAAGGACAAAATAGGACAACCATCTCACAAAGATCT *** TAAGTAACTTTTTCCATCCAGCAACATCCAGACGATTTCAGTGACCAAATGCTCAGCTGTAACCACAGCA CTAACTGGCCTTCTTTCCAGATTGGGTTTGGTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCA AGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGGACTATGAACAAAAACAAAT GATAGATATAGTGACAGTACCAAGAGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGAC ATAGCATCTGCCCTGGAAATCGTTATTCCAACATAATATTATTTTCTAGAATGCCCTGGAAGGACAGAAT ATTTAAAAATATATCCAGGTGCTAAATAGGCAGCAGATCTCAATTCACACATGACTACCTTTGAGCTAAT GACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGAGAATA CCAAGACAAGCAGGCTGTTCCCTGGAAAAAATCTAATGCAAGGAGGGCTAGTTCACAGCAAATTCACTGC CTCCTCCCATGCACGTGGTAGAGAGTACCAGTATCAACATGGCCCTGTTTTCTGCTAAAACCAGATTTTG AGGAATCAGAGACCCCCAACACTACTCACTCAGTAGCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTAT TAGAATGAAAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATATCCTTTCCT AGGCACATTCGTCCACTAAGGGAACAGCCTCAGAAACTGGTACAGCAATGGGTGAGATGAGATCATGGAG AGAGAACACAGCCATCCCCTATAGAAAGGCACAGCTTTTGGGCTTCTCTGGCCTGAATGCCTTCTGGGGT ATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCACACATAGAGGTTTCCTTCTCACTTCAG ACACATACATCACTTTCACACCACTTGGGGATGGAAATACCTACAAGAGTGAAGGTCAAGGGCCCTCCCC AGGCATCTCATTCATTACTCAGCTTCCTTCCTGACCAAGTCTGCCAACCAATGGCCAGCTATGCGCCTCA TCCTCATTGCTTCTGCCTCCACGTAAATGAAACCAAAGGCCTCAGCATATCCTGGGAGGACTGGGGGCTG TTACCTAATGGTCCTCTCTGTCCCATTATAGGTGCAAGGCACCCCATCCACACATTTGCACCACTACTCC AAGATAGTATTTTTCTTTTCACACAATCTCTTTACAGCAGAATCCAGAGTTGGATTGTAGTTTACCTTCC TGGAAAGCTCATTATCTCTGTTTGAATTAACATTTCAGCATGGAACTAACTGGGCGGAGGAAGGATCGTT ATACGTCTTCAGAAAGTTCTCATTGCCCCAGCTGCCTAGTACTATACAAGAAGCTCTACTTTGATGGCAG ATCTAAGAAGGCTATAGGCCTTTGTTTGTAGGAAGCAGTGTCATTACATTCAAGCTTCACTTCTCTGATT GGCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTTCTGCCTATGTCTGATGACATAAGGAAAACTTG GCTTCCTCTGCTCAAGGTTCCCCTCTGCTCATCCCTCCTCATTCAGACATCCTCCACCATACCAGTGTTT AGAAGCAAAACATGAAGGGCTAGCGCCACCAGGATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGA TGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAA TTCTGACATGTCCTTGGCAATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCCCCAC CTCAGAAGCTTCCTGCCCAGAGAGCCAGCAGCCTTGGGATACTAATGAGGATGCAACTGGCTTATTGGTA TGAAATAGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGCAGGTGGCTTT GTGTCTGGAAAGCTTTGCCTAGCCAGTACAGCTGTGAGCAGAGGCTGGTTATAAATTTGAACTCCCTCAG CCCATTTGCAACTCTGCCTCTGTTCTCTTGCATTCTGTTTGGTTGCCCTTTAGTTTCCTAGTAAATGCTC CTTTTG end 1 AAAAACTCCAACCTTGTCTTATTTAACTTGGGGGAAGGGGATTCTCCAATGTCTTTTCCAGGATAAAGAA GGAAATTAAAATACCATGAAAAAATGGACATGGCAGTAGAAAGGAAACATTCTGATCAGACCTTGGGAAA AGCTGGTGCCGAGAGAGGGAGAGGCCAGGTGTCCCCCCACCCAACTGGCACTGATTCTCAGCCCCTTCCT CTTACTTCTGTTGGCTTCAAGGAGACCTGCCCTTGATGTGTGTTGCTGCTGAAGCACCCTCCCAGCCAGT GAGTTGGACATATGCAGCAGGCACTTTGATGTCCAGGAAGTACACTGGTACATGACAGGAGCAAGGGTCA GGGAGGGGAGGGGAAAGGTTTCTACAATGCAGATGTTTTCAAAATTCTCCAACAATCATGACTCTAAATG GTATGATTTAGGGCTGGGTGCAGTGACTCACACCTGTAATCTCAGCACTTTGGGAGGCCAAGGCGGGAGG ATCACTTGATACCAGAAGTTCAAGACCAGTCTGGCAACATGGAGAGACCACCATCTAATTTCAAAAGAGA CCCCCCGCCCCCCCGGCTAATTTTTAAAAAATTAGCAATGTACCTGTAGTCCCAGCTACTTAGGAAGCTG AGATAGGAGAATCGCCTGAGTCCAAGAGCTTGAGGCTACAGCGAGCCAAGATTGCAACACTGCATTTCAG CCTGGGTGACAGAGCAAGGCCCTGTCTCTCTAAAAAAGAAAAAAAAAAGGTATTGTTTAGTTCACATGGC CATCAGTAGAACTACATTTCATATGATGAGAAGAAAATAATTATTTATTTTACACTTGAGTCAGGGAGAC TGACAAAGGATAGGTATGGAAAATGGCTTGCTATTTTCATGGCCACCCTGTCCTGCAATGCGGGGGGTGG GAGGGGGGACATTCCAATGACTTACTGCTGCATGACAAAGCACCAAAACATAGTGGCTTAAATAGAAATA TATTGTCTCTCATG end 2 ac107884.15 (121920-118681) Antisense overlapping gene - TGCTGCTGCCATGTAAGAAGTGCCTTTTGCCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACT ac107884.15 122889-122959 - GGCTCAGTGTGGTCAAAAGAAGACTATAGAATCAAGGATGAAGAGAAGGAACACAGAATAAAAGGACGTC TCAGCAGGAAGCTCTGTGACTACTATGT[GTGAGT ac107884.15 127376-127473/127479 - [AATTCTTACAATACAGCAAATGATGCCATACAGTGAAGCACCTTGAAAGATTGCTGGGATAAGCTGACAG CATGGCAGCCAAAATAGTGACCCCAGGCTTGCAGGAATTCTGTGCTTTCTGGAGGAAATGGTCATGGGTT TCCCAACCTGCCTTTTAAACTAAG[GTAAGTCTCTTATAAAGACCTTTATGAGAACTGTTTGAGCCCTCA TGACACTGCAAATCCATCTGAGATGATGACTGGGACCTTCACTGCCACTGTCTTCATTCTCATGGGTGTT GCCTGGCTCTTTGGCATTCAGAGCTAGCTCTCAGTTGCTTTGGTGCATTAATAGAACCACTATGCCTGTA GATTTGAAGAAAAATTGACATGGAGAATTTATCTAAGAAATCAGTAAGTAAAACTTGTAAAAATCATTTT ACAAGTTGTAAGATAGAAGAAATTGAAATTCTGTCCAACAAGAACTTATTCAATGCTGACTTTGTGCCAG GCATTTTGCCAGGTGCTTGTTATACAATGATGAATAACACTTAGGCCCATTCTCAAGGAGCAGTGGGAGG TGCTGGGGATGACACACACACAGATAATATCAAGTGGCACCAAATGCTATGTCAGGGGCAGGCACAGGGT GCTAGGAGAGGATAGCACAGACGAGAAGCATTTAGCTCATACCACAGGATCTTCAGAATGCTTCCTGAAG AAGCTGACAACTGATTAGATGCTAAAAAGACAGGCTGGATCTAGGCAGGAAAAGAGGGGTTGAAAGGACA GCACAAGAAAAAGTTAAAGCAGAAGCAAGGGCATGGGGGTGAATAGAAAGCACTGTGT end 1] ac107884.15 130753-130916/131579 - [GACCGAGCTGAAGAAGCCCCCGTCTTCCAGCGCATGTTATTCCCATGACAGATGCTAAAAGTTCAAGGGG] ac107884.15 138270-138339 - [AGAGCTACAAGAAGTGCGTTTTCCTGTGGCTACTTTCATGTCTGGATGCAATGCCTAGA CCTGCATCCATCTTGCGACCAACCTGAAGATGAACAGAAAGGAAGGAAGGATGGCCCAAT AGCCTGGGAAGAACTGGTGTTCCTGATACCATCATTAACCACAGAATCTACAATCCCGGA ACCCCCCATCCTTAACCATGGAATCTACAATCCTATCTCTAGACCCTTTGTCCAGATGCT ACAGTTTCTTTGTTCAATCTAGTTTGTGTCAGGATTTCTGTTCATTACATCAAAAGTATT CTAATACTTGTAGCAAAGCAACTGGAGAAGTTTTCACTTTGTCTTTAACCAAAGAAGACT TCCAGGAAACATCTCCTCAGTGGGTTTCTCCCTCACCACTGGATTTTTATCTCTGTACTA GTGCTTTGATTTGTTTTAGGAGTCTCACCTCTCCACCTGTCATATTTCCCTGGCAGGCTC ATTTCTGCTAATGCCCACAATATGTGTATCAATGAGCTTTCAACGTTAGGTACACAGCTC TTCAGGCATGTATAGCACATTAATCTGTCTGCTTCTAAGTGGTCTGTTGACATGTTTGGG TGCCAGTTATATCTACAAGGCTGTGATCATTGTCCTGGGTTATTCTGTTTGTTCTCTCTG CAGGATGCATTAGGACACCCAAGGCCATGGCCATCACTTACATCTAGGATTCAATCTTAT CTCCTGTGAATCACTGGAAACCTCCTGTCCTGGAACCCTTTTTTTCCACATCCCACTGGA TGTCATTCATAGCAACTGGTCTTGTGGGTTGTCTATTTTATTGTGTTGTCTTACTCTTCC TCCTGGTATCAGTTTTTAAATCCTCTTGATGAGATCAGCTGATCAGTCGCTAAGCAACAT AGTCCCCCATGTCTTTGTAAGATTCTCTGCACTCATGGCTAGAATGATTTATTCTGGTAT CTTAAGCTGTGTTTCAGAACCTCATTCTAAATATCAACCTATTCTTGTAAGTCCACTACT GATCATCTTTAGATATTCTTCAGTCTTCCAGAGTTCCAAAGGGCAGTAGGAAGAAGCAAT GAAAATACCACCTGTATTCTCACATCTTTCATTGTTCCACTCAAAAAATACCACCATGTT CACTTCTGGTGGAACGTTTATGTCCATGAGAAGCAGTGGCTTTGAAGAGTTTTGGCAGAC TATGGCGCCTTACTCAACATTGGGAAG[GTATCTTGCCATCAGACCTTTTGGGTCTCCATG AAACTTCTTATACCCCCTCTGGGAAAAGTCACTAACTGTGATCTTACTGAGCTTCTAAAC ACAGCATTTTTTTTACACTTAAGTGAGCGGGGGTCCTCCTCATTTGTGCTTCTCTTCTTG TAAGGGTGACTTCCTCCCAGTAGGATGAATCTCATGCCTATTTGTGTTATTTTGCTAATT CCAGCTTCTTTTCTACTCAG]GGGGGTTCCAACTCTTTTAAG]GTCTCATCTTCAGCACTTC TAAACTGTGGGAAACTATGTGAAAACAAATGGAGTGGCCAAACACACCATTCATCACTGT GCTTCTGGACAGCTGCAAGTCCATACGTGTTCTG[GTGAGTCTTCAGGTTGTACGGGAACA GAGGCTGAATCAAGGCAGTTCAGTGAGAGTCTAGATGGGAGTGCTTATGGTGTTCTATAA TAAAGTACTTATGGAACAATAATAGAAATGGATTCTTAGAGAAGCCCAAGAGAAGGAACT ATGATTGCCTCATTTCCCTGACATTTCTAAGTTTGGTGGCATAATCTAATTGACCCAACC CACCTTGGGGTGCCAGGCCATGTCATAAGTCACTGGACAGCCCATAAACAGCTTTCTGGG AGCATGTCCCCATCTTGATCCAATCACCTGTGGCCAGGACATTTTACAAACCTCGGTGGT TAGGGCTGCTTGTTCAACAGATATTAGGGGTGAAGTTGTACATGCATGCAGGGGAGGCTG AGATGGTAGGCACCGTGAATAACATGTTCCAGGGTGGGCTCTGCCTCTTGTCTGCTCTGT AACATACCCCTGCTTCCTTGTCCTGACCTCTCATTTGCTAAAGTCTGATTTCCAGCTTTG AAGTCTCTGCTCAATCTCTCCAGCCTTCTGCTCATGTCTTCACCTCCTACCTTGCAGCCT GTCTTTTGACTTGATGTTGCTTGACTGCAATTCCTGTGACTTGGCCTTGGGGTCCACTCC CATGAAATGCTTCTCTGGCAGCCTTGGCAGGTGTGTCCCAGTGTTCCTGAGTTCCAGTGT TCCTGGCTGTGTCCTTGCACCAGAGCAGGCTGCTTGAGATTAGACACGCTCCTCCCTCCT ATCAGTCCACCTTGGCTCTGACACTTTCCTCAGCCTCCTTTTCTTTGTCTGCTGGAGCAC AGCAAAGTTTCCCAGAAGGTTTAAATTTACATTCTTGGTCAAGGTCTCACACCATCATGA CACTGAAGCAGATAGAGTGACTTCCTTCTCTTCTAAGCTGTGTGCATGCCTCCATGCCCC TACTAGTTTGTATAATTCCAGTTTCTATAATTTCTTCCATTCTTTCCTGAAACTTTGTGC TTTCTGTTAAAGTAGGTTTTTAGGGATATTTTTCAGGTCGGTTCATCCCTCTGAATGTCT TGGGTTTGTCTGATTGAAGCCAAATGGACACAGTGAGTGTTTCCTTTCTGAGTGGAGGGA GGTGGCTCTTGCATCACCTTTGGGTCCTTTAGAGCTTTAGAGTAAATGCTCAAAGACTGC CCACAGCTGGATTTGCTGGCTGTGAATTAGATCTGGGAGGAGAGGACTTAGCAGGAAAAA GCTTCTGTATCTAATGCTGAAATCAGAGATGAAGTCTGAACAGAAGTGCGACATCCAAGA GTCAGGGGCGGGATGTAGGAGGTGCATGGGATGACAGGGGCGGGGCTCTGATCTGAGAAG GGCAGTTTCAATGTGCACAGCAGAGCACTGGGGAGGGGATGTGTTGTTCCATACAAGCTG ATGGAAGTTGATAGAAGAATAGGAACAAGGCTTGGATGGTGGCAAAAGACCTACCTGCAC CAATGTGAAAAAAGGGGCCCTTTCAAGGCTGAGCCAGGTTGGAAGAGGGCAGAGCTGCTT CCAGGACACCAGAGAGTGCAGCAAGTATGCAGAGAAAACCTGGGCACCAAGAGACCTGGG AGAGAGGAGGCAGATGGGTGGGCCAAAGTTCTGGTAGTTGGGAAAGGTGATAGAAAGCAC TGCATTAATGCTGGGTCCTCTGCCCTTGTACTAAGAGCAGCACATGGCTGCCTCTGAATC CTGCCCATGGAGTAACATTTGCTTCCATATGCCACAAAGATGAGATGGGGCCCTGATGTG CCTGTTATAGGAGGGCAGAGCATCCTGTGTGCTCTGTGAGAAGAGCTGGGCCACGTATCT CCAGGTCAAAGCCCGCACAGCAGTTATCCCCTCCCTCTCTTGTATCTTCAACCTTTCCTT TCCTATTGGGAAGGATTTCCGTATTTCCAAGAGCCTGCTCAAGTGGGGTCAGCATGTGTC TCTGGTCACCACCCTCTCCCCTGTGGAAGGCTGACAACTCTCCCATCTATACAAAATTTG AAACCACCAATTATATGATTGACACTATTACACTGGAACAATTTCCTGTCAGACTCCCCC ACCAGACTCTTTACAGGCCGGTGCTTCATCTACATCTCTCTGTCCACAGCACTTGGTGTA GTATTCGCAACCTAGCAGGAATGAAAGAGTCCGTGTGGAGTCAAGCACCTCAGGGAACCC CTTGAAAGCAGTGACACATACCTCCAACAAGAATTGCCTCTTCCTTCCTTCTGTGGCTTT GCACAGCATTTTTCTTTAATTATAAACACAGTTGGTCTCTCTATGCTGTTTAGGCTAAGC ACAGCACAGCTTCAAACTGGAAGGTTAAATATTTGTGGTAAAAATAACTTATTTGTGCCC ATGCAAATGTGGCAACACAAACTCAGGCATGTAGTGTTCTATGCAGAGAAGCTAAAACCA AGGAATGACATTAATTTCCGGTGAAAATATGTGATGACAATCTTAGAATTCTGGCTTTTC AGAAAAAAAAAAAA end 2] ac107884.15 146993/148452/148473-148218/148585/151085 - [ATGAAGTCTGGCTCTGTTGCCCAGGCTGGAGTGCAATGGCACAGTCTCGGCTCACTGCAAC CTCTGCCTCCTGGGTTCATGCAATTCTCCTGCCTCAGCTTCCCAAGTAGCTGGGATTACAG ACATGCACCACCATGCCCAGCTAATTTTTGTATTTTTAGTACAAACAGGGTTTCACTATGT TAGTCGGGCTGATCTTGAACTCCTGACCTCAAGTGATCCACTCCCCGCAGCCTCCCAAAGT GCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCCTTTCAGCTGATTTTCTAATCAAGAAG TTATATCAGTCTTTGTCTGCAGTTGCTCAAAGACTCTCTTTTAAAGTGCAGAGACTATCCA CCTCAGCTATAGCACAGGGCTCAGCACTGTATTTCCAGTTATGGAATACAGTTATTTCATA TATGTTATATTATTCTTAATTCTGTCCCTAGTTCCTGCTACTGAGGAAGTCCATACTCAGC AGGACAGTCTCCTGGTCTGCCATGAATTCAAACACAATCTGTAAAGACAGTGAAGGAAGCT ACATCTGTGCATGGGGGCTTTAGAGAATTATTGGCTTGAAGCAATAAGAGGAACATCTGGG CTGAGTAGTCCTCGAAGACTCTCATGTGATTCAAAAGTCCTTTTCTTCCTTATTATTTCCT ATCTTGCTCTCAAGCATCTCCTCTGGCAGCAGCAACTGGAACTAAAAGTGATTTCTCTATA ACAGCGAGCAAGTTTCTCATGGCCTTTGCTATTAACTCTTTCATGCCTGCTGACCTGCAAA AGAATCAGGAGGGCTGGTGCTGGAGCAGATGGCGCACT[GTGAGTGATGGTTTAGATTCTGC CTGGACTCAAACCATTTGGTTGATGGCGGGAACCTTGATTTTCCCCCTTCTTATCCTGAGA GTGTAGGGTTTCTCTGAATTATTATTTCTTTCTTTGCAAG]GATCCCTGGATCCTCATTCCT GATATAAGACTAGTTCTAG[GTAAGTGCACATTCATGTGATATATTGGTTCCATACTAGGCA ATGGAAGTGCCACATTATCTGTAAGGAGCAGGAGAAGAGCCATTAGCCCCAGTCCTGGGAA CGAACTTTCTGTAACTTTAAGAAACATAAAACTTTAAATGCAACTGAAAGATTATATTCTG TCACCTCCAACTACTCACCCATAAATACAATAGGCACCACGGAGGCTAGGATAAAGTGCAA ATTTAAGATTATAAGTGTGCTTATAATAAATATTGACAACATC end 3] ac107884.15 152735/153690-153565/153729/153997 - [ATAATTCAATACAAGAAAGAAGATTTGCTTGGGAAG[GTCTGAATGGCCCTAGCTTTGTTTGT TAACCATAACCTCTACCAGCTGGAAACACAATGCCCCACTAATACTAACAGTGCCTGCTTGT CCAAACAGCATTCTGGCCACTTACAGCAATTGACACAAATTCTAACAG ac107884.15 160668-160703/160839 - GTAGATGGGGCAAAGCATTACCTTGTGTAAAACTGCTGCTAAAATATATTCCTAGTGAGAAAGGTCAA ac107884.15 161058-161125 -------------------------------------------------------------------------------- 78. Homo syt10 Hssyt10 Abundance low Chromosome 12 Size >64.9 Kb MSFHKEDGVNSLCQKALHIVTELCFAGQVEWEKCSGIFPRDRGSQGGSST^ DISVSLLAVVVSFCGLALLVVSLFVFWKLCWPCWKSKPVTSNITTLPQSISSAPTEVFETEEKKEIKEN EKPAVKAIEPAIKISHTSPDIPAEVQTALKEHLIKHARVQRQITEPTSST^ RHSSFRRHLPRQMQVSSVDFSMGTEPVLQRGETTTSIGRIKPELYKQKSVDSEGNQNEDVKICGKLNFT LQYDYENELLVVKIIKALDLPAKDFTGTSDPYVKMYLLPDRKKKFQTRVHRKTLNPLFDETFQFPVAYD QLSNRKLHFSVYDFDRFSRHDMIGEVILDNLFEVSDLSREATVWKDIHCATT^ ESIDLGEIMFSLCYLPTAGRMTLTVIKCRNLKAMDITGSS^ DPYVKVSLMCEGRRLKKRKTTTKKNTLNPVYNEAIIFDIPPENVDQVSLSIAVMDYD^ RVGHNEVIGVCRTGLDAEGLGRDHWNEMLAYHRKPITHWHPLLE^ LPGRATSFDSQGSCPSPKPPSTP - ACTCCATGCCGGGTCTCTAGTTCCAGCGCGCCTCGGCTCGCTCGCGCGGCGGGAGAGTTGGCGCAAACCT CGCGGCAGCCGCAGCCTCCTCGCGCGCCTCTCCTTCCCCTACGCCCTCCGCTCCCGCCATGGGGCCAACG TGGGGCTCCTAAGAGTTGCCGGCTCTCAGCGGCGCAATCTCCAGCCAAAGTCACCGCGGGCGGACTATGG CTTAGGGCGCCAGAGGGGTTAGAGGTACGGGAAGAGGAAAAGACGGCTAACTGGGAAAAAAAGAGAAAAC GAAAGAAAAGCCAAACGATGAGTTTCCACAAGGAGGACGGAGTGAACAGTCTGTGCCAGAAGGCTCTGCA *** CATCGTCACCGAGCTGTGCTTCGCCGGCCAGGTGGAGTGGGAGAAGTGCTCGGGCATCTTCCCTCGGGAC AGGGGCAGCCAGGGCGGAAGCAGCACAG ac016956.20 76427-76874 phase +1 - ATATTTCAGTCAGCCTGTTAGCTGTCGTTGTCAGCTTTTGTGGACTGGCCTTGTTGGTTGTCTCACTTTT TGTCTTCTGGAAGCTGTGTTGGCCATGCTGGAAAAGCAAACCTGTGACTTCCAACATCACTACGCTTCCA CAGAGCATTTCAAGTGCTCCTACTGAAGTTTTTGAGACTGAAGAGAAAAAAGAAATTAAGGAAAATGAAA AGCCAGCCGTAAAAGCTATTGAGCCTGCAATAAAAATCAGCCACACTTCCCCTGACATCCCAGCAGAAGT CCAAACTGCTTTAAAAGAACATTTAATTAAACATGCACGTGTGCAAAGACAAATTACTGAGCCTACGTCA TCAACCCG ac023158.28 9124-9481 phase +2 - CCACAGTTCCTTCCGAAGACACCTGCCGAGGCAAATGCAGGTTTCCAGTGTTGATTTTAGCATGGGCACA GAACCTGTTTTACAACGAGGAGAAACAACAACCAGCATTGGGAGGATAAAGCCAGAACTCTACAAACAGA AATCAGTTGACTCTGAGGGCAACCAAAACGAAGATGTCAAAATCTGTGGGAAACTTAACTTTACCCTCCA GTATGATTATGAAAATGAACTTCTAGTTGTTAAAATTATCAAAGCTTTAGATCTCCCTGCTAAAGACTTC ACAGGAACTTCTGACCCTTATGTGAAGATGTATCTTCTTCCAGATAGGAAAAAGAAATTTCAGACCCGCG TGCACAGAAAGACTTTAAATCCTCTATTTGATGAAACTTTTCAATTTCCTGTAGCATATGATCAACTAAG CAACCGAAAACTACATTTCAGTGTGTATGATTTTGACAGATTTTCTAGACATGACATGATTGGGGAAGTG ATTCTTGATAATTTGTTTGAAGTCTCTGATCTCTCCAGGGAAGCCACAGTATGGAAAGATATTCACTGTG CTACCACA ac023158.28 28263-28830 phase 0 - GAAAGTATAGACCTGGGTGAAATCATGTTTTCCCTTTGTTACCTACCGACGGCTGGGCGTATGACATTGA CAGTCATTAAGTGCAGAAATCTGAAGGCGATGGATATTACTGGCTCATCAG ac023158.28 50328-50448 phase +1 - ATCCTTATGTCAAAGTGTCCCTGATGTGTGAAGGTCGAAGATTAAAAAAGAGGAAAACAACTACAAAGAA AAACACTCTAAACCCTGTGTACAATGAGGCCATTATTTTTGACATCCCTCCAGAGAACGTGGACCAGGTC AGCCTCTCCATTGCGGTCATGGATTACGATAG ac023158.28 53099-53270 phase +2 - GGTAGGACACAATGAGGTCATAGGAGTGTGCAGAACAGGACTGGATGCTGAGGGTCTTGGGCGAGACCAC TGGAATGAAATGCTGGCCTATCATCGAAAACCAATAACGCACTGGCACCCATTGCTGGAG ac023158.28 55658-55787 phase 0 - TTACCTGGCCGGGCGACCAGTTTTGATAGTCAAGGATCCTGCCCTTCTCCTAAACCACCTTCCACACCA TAATGCCTCCAAAATGAGACCATGATATTAAGCATCTAGGATCACGTGCTCATTGAATCAGAAAAAAAGTG *** GAAGGTTTGGTTTCCTCATTTGAAATATATCCGTACTAATGAACAAACTTGATGTGCACTTTTTTATTTG CTTTTATTGTTGATTTTTTAACTTTGAACATCAATACATTTTACTTGAATACATATAGTCCTTAGTTGCA TAAGGCATTTTATCCTTCGTATCAAATGCCTGTTAGCACAAAGAGTGTTTTACTATGTTGTAATTCTTTG CATATGAAATGTTTTTTTAAACAGTTCATACTTACCTAAAATTAAATATAGTTTATGCTGCTATTGTATA AAGTAGCACATGTCATATATGTATGGGTTTGATTTTGTTATACTGTGTTCATTTCTAGTTGTGCAGGTGG TTCTGTATAAACTTAAAAGGAGATTTTGAACTTAACTTACACAACATTAAATCCTTGCACAATCAAATTA ATGTTACTTATCTGATAATACTTTTCTTTCATTCTCAGAAAATTACTTTCTTGGTGAGGTTTGGCTCTGC TAAACTCAAAACTTGTCTCTCAAGCTTGTTCTTTAAAATACATAGACAAAGCTGTAAATTTAAAGAATCA TTTTGAATATAAATTTAAGAAGTAATACTTATTGGCTGAAAAACGGAGGCTGAGCCATTGTGGCTACCAT TTTACACTGTTTTACTGTAACATTAGCTCAAATATCTGTTGCACTGTTCAACTGATATTTTTAAAATTCT AATAATCTTCATCTCAAATGTAGCATTAGTATTTCTAAGTGAACAGAATCAGAAGTTAATTTTTAAGTGT TTGTAAGGTTCTCAAGTACTGTGACATGTATTTTTTTGTGACGTGTATTTTTTGTGACTTGAAGCTATCA TATAGATCCTGTATTTCTGATAGACCATACTAACAGACACCAAAGGAACAACAACACTGTCTGTGTTCAT CACCGTTTAGATTGTACACAGTAATGGTGACTCTTAAACCCAGTCAGAAGCTCATCATTGGAATTCAGTA TTTTCTTAAAGAAAGGATGATTTATTTTCAGCAACATATAGAAATATACTATAAATATTAATAATACAAC TTCAATGCTTAATAATAATAAACAAATTAATTCTAAAGGCCCAGGCCTCCAGTCCTTGCATGAAAGGCAT TTGCCTTCATAAGGATCAAGGTTCAGGCCACTACATGTAAAAACTATGCAAGTGTTTTTACAAGACAGAA CTTTCTTTTAAGTCAGGTCAACATATTTTGTCCCATTTTCAGGCCCTGTTGGAAGGTATCTATACTGAAT TACCCCAACCTTACTTTTAAGATGTGTGGTATAGATAGTATATATTTCAAGCTTATTTCAAAATTGGTGG TTTTTTTAAAAAAAGAGGCAAGAAAATAAAAACATATTTACCTGGATGAGAAAATTTTATCAGCGGTTAT GAAATTTTTATTTTTGTAAAATCCCATTATTTCTAAATATTAAAAAAAAGTTTTAAAAGCCTTGAAATTT TGTTGACATCTCTTATAGTGATGGCATTACTGTTAATTAAGAGGTAAATATTTTGCACATTACCATTTTA AAGGCAAACACAGTTCTGCCTCAGATTTTTCAAAAATGCTTATACCACCCTAAGGAAAACAGGTACTCCT AGCTAACATTTTCTCATTGAAAATAATAGAAGAAAGCTGTTTGGAAACATTTGGCTACCTTGTCGAGCCT AAAAGAATTATTTGCTATAGGTAAAATGAAAGATGACACTTGCATTTTGAAATTATTTGTTTTATTGGGA AATAAAACTTTTCAAATAGGAAGACAAAAAGTTATACTATTAATAGAATGACATTTTTGGAGA ac023158.28 58718-60670 -------------------------------------------------------------------------------- 79. Homo syt12 (syt11) Hssyt12 Abundance moderate Chromosome 11 Size >44 Kb Transcript complexity affecting Nterm MSHNTQTNIIFH^ SPGNEMKTKAPPVGE^ VTVTAADIMAVDVAEYHLS^ - alt.Nterm VIKSPPGWEVGVYAAGALALLGIAAVSLWKLWTSGSFPSPSPFPNYDYRYLQQKYGESCAEAREK^ RVPAWNAQRASTRGPPSRKGSLSIEDTFESISELGPLELMGRELDLAPYGTLRKSQSADSLNSISSVSNTFGQDF TLGQVEVSMEYDTASHTLNVAVMQGKDLLEREEASFESCFMRVSLLPDEQIVGISR^ IQRNAYSIFFDEKFSIPLDPTALEEKSLRFSVFGIDEDERNVSTGVVELKLSVLDLPLQPFSGWLYLQDQNK^ AADAVGEILLSLSYLPTAERLTVVVVKAKNLIWTNDKTTA^ DPFVKVYLLQDGRKMSKKKTAVKRDDPNPVFNEAMIFSVPAIVLQ^ DLSLRVTVAESSSDGRGDNVGHVIIGPSASGMGTTHWNQMLATLRRPVSMWHAVRRN - start1 GAAGTTCTAGAAAATGTTAATTGGGGGAGCTGTGGCTGGCAGAGAAGGAAAAAGGAAGCTGAAGGGCACT TGGGCTCATAATGGTCTCTCCAACCCTGATCCTGTCCTTTATGGACATTTGGCAGCGCTGCTGCCTTGAG GTGCCTTGCAATGCTTTATCTTTTTGTTAAAGCCACCTCTGTTGCTTCAGCCAGCTTGAGCGGTTTTCTG TTACTTGCTAGTGGTTGGGAAGGCTTAGCCGACGAAGGGAAAATGAGTCAGGTCCTGAAGGATGAGCAAG TTACGGGAGTGGGCCGCATGGTGAGGGAGTGGACTTCCTGATGGGGTTAAGGGCGCCTGAACACCTGGGA GGCAAGTTGAGGCCAAGACCTGGGGTGATGGAGAGGCAGGGTAGGCTACCCAGTGAGTAGGAGGCCGAAG GAACCACAGCAGGGCTCCAGATCTCCTGGCCCAGAGGGGCTGGTACGGGAAGCCCAGAAGACACTCATCC CTAAGGGGAGCCTGAGACTGAGGAACTCTCATGCCCTGCGTCGGGCTCGTGGGCGAAGGGCCTTCCCAGG GACTGCACCATGGCCTGTCCCCAGCCTTACCCAGGGGCCTCCCTCTCAGGTTCTGAAGGACCCAGGGGTC ACAGCTGTGTGGGGTGCTCCACTGAACACTTCCTTCAAACTCCTTCAG ap000729.4 14367-15044 - GCTGGAGTGCAGTGGCGCGATCTCAGCTCCATGGGAGAGAGTTTGAAAGGATGAAGAGTTTACATCCTCT GGAAAGAAGCAAATAGAAGGCATTCCAGGCAAAAGGAACTGCATCGAGTAAAAGCATGGAGGCAAGAAAG GGCTTGGTGTGTTTGAGAAACAGTGAGTAGGGCATGGTGGTGGCAGAAGCTTAAAGTGTATGGCCCGTGG ACAGTGACAGCCGGACAAGAAGCTGAAGTGACAG ap000729.4 17468-17711 - AACAAGTTGAACCAAAGGAATTCCAGACCTGGGAAAGTGGAGAAAGAATTTTGGGGTCAGAGCCGTTTAA GACTTTGCCTAGGGCCTGGGTCTTCTTTCTCCTAAAGGCCTCAACCCACAGCACGCCACACAAATATGTC ACATAACACACAAACAAACATCATATTTCACA *** ap000729.4 18412-18583 phase +1 - GTCCAGGAAATGAAATGAAGACAAAAGCGCCCCCTGTGGGTGAAG ap000729.4 29461-29505 phase +1 - start2 TTTAATGGGAAACTCTCCCCGCACACACACACACTTTTTTTTTGAGGCACAGTCTCACTA TGTTGTCCAGACTGGTTTTGAACTCCTGGGCTCAAGAGATCCTCCCACACCAGCCT CCCCAGTAGCTGGGACTACAGGCATGACCCACTGCACCCAGCTAAATTTTTCAATTTTAA AATGTTGGCAACTCACTTAAATGTAAGACAAATAAACACATCTGTAGGCTGGCAGTGCTG CCCACACTGCCCAGACTAGGGGTTAGGGGGTCTGTATGGGCCATCACCAGGCTGCTAACC ACAGCAACCAATATGTGCCAAGCCTGACTACACGTACCTTCTCATTCCACCCTCCTGGCA GCCTCACATCTGCTTTACAGGTGGGGAACTGAGGCTCTAAGAGACTAAGAAAATTACCCA AGGCCACTGCAGCTAGCCAGGGGCAGGTATGGGAGTCAGAGCTGGGTGCAGCTGACTACA AACCCTGTGCTCAGGATGACACCCTCTAGGAGCCTCGACCTCTCTCCCAGTTCTCTTCTC CCTCCACTCAGGCAAATGAGCTCTGCCTTCACAGGGCACCAGGCTGGAACATATGTCTGG AGGCCAGGGGCGGTGGCTCACGCCTGTAATCCTAGCACTTTGGGAGGCCAAGATGGGAGG ATCATTGAGGTCAGGAGTTCAAGACCATCCTGGCCAACATGATGAAACCCCGTCTCTACT GAAAATACAAAAACTAGCTGGGCATGGTGGCTCATGCCTGTAATCCCAGCTACTTGGGAG GCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCTGAGATCGCG CCATTGCATTCAAGCCTGGGTGACACAGTGAGGCTCTGTCTCAAAAAAAAAAAAAAAAAA AAAAAAAAGAAGGAACTTCTGTCTGGGGTGTGCCTAGCAGTCATTCACACCCTCACTGAA ATCTCAGCTCCCTGGGAAAGGATGTCGTGTTAAAGGGAGAGGAAAGAACAGACAGCGTGG GAGTCTGGGGTCTGAGCTGGGCCAGCCATGGAGGTGATGGGGCCCCCGACAGCCAGAGGC CAGATGCAGCTTGAGGCTTTGTCCCGTACCACGCCTGTTGTGCTGTGGGGTGTACTTTGC CATGCATACCTTGCTCGCGTGCTGCGGGCATTGGCTGTCCCAGCTTGGCCCCACTCTTGC AAAGTCAGCTTGTGCCAGGTAAGCAGGAAAAAGCCGATGGCTTATCTGATTCCCGGCAAG GCAGAAGCAGGCTGGGAGGTGCGTGTGTGTACATTAGCATGTGTTTCAGCGTATCCAGAC CAGCTTCCGCCAGGAGCTAGGACCACCTTGGGCAGGTACATGGTGACCCATTTGACCTGC AGATTCTTAGGAAACTTTTTGGAAACCATATGCCCACTTGCAGTGAGACACAGTGGTTAG GAGCATGGAGCCAGTTGGCCTGGGTTGAACAGTTTATTAGCTGTGTGGCCTGGGGCAAAT TACGCCCTGGGACTCTCACCCGCAAACCAGAGATAATAATAGTACCTACCTCATGGGGCT GTTAGGCAAATTAAATGAGGTCAGATAAATGCAAAGTGCTTAGAATGGCGCTTGATGTGT AAGAAGGGCTCGACAAGGTTCTCTATTACTATCATTATCTCCAGCCCAGGCCCAGGAATG AGCTTCCACTCTAGTCAGGATGGGTGAAGCCCTTCCTGGCTTAGCACCACCCTTCCATCA CCATGACAACGCACATCTCCTTGTGGGAGTGGGGGCAGCATCAGGAGAACTGGAAGCCAG GAGCTGGCTGTGCACCTTATCTGACCTGCTTCTAGAGGCTCCTGGGCACCTCCAGGACTT AAGGGGGTAGACTAGGACTTATGGCACCCCAAATGTGCTGGATAACCCTGACTGGAGCAT GGCACCGAAGCTTCTTGACTCCAAAGCCACAGACTGGGGAGAACCCCGGAATTCCTGAAA ATGTGGAGGGCCTTAGCTTTACCCTCTGATTCGACCCCAGTCCCAAAGGGAACCTACAGG ATGCTCCGAGGGGTTGGGAATTGGTGGGTCACACTCCCCAAGGACTTTTTATACTGCGTC TGAATGGTGTTTGCATTTTTTTGCAAATTGGTTGCTACCTTTAAAACTCAGGAAATGGCA CATAAAAAATTCAGGTATCTGGCTTTTCTTTAAAGTGCCAGAAGATCAAGCCACGGTGGT TGGCATTCCTGCTGGGGCAAAAATGCAGCTGCCCTTGGGCCAGGCCATCACTCTGCAGTT CTTACCTCCCCTTCCCCTTGCCCTACCACCCTGCACCAGGCCTGCAGGCTTACCATGTGT AACCACCTCTCTGAACTACAAGGGAATCCAGAAATTGGGGTGGGCATTATCCTGGCCCTC GGTGCCCTTGACCTGAGATCAGTGCAGCCCATCCCAAATTCCTTTTTCCAGGACTCCCAC ATACACCCACTTAGAACACATCTGTGAGCCAGATTTACTTCTTAGCACACTAATAAAACA ATGAGCAGTCACCTAGGTTCAGGTAATGGGTTGTACGAGCTCCCAGACCTTTCTAGAACA ACTTAAGCCTCAGTCATTCCTAAAAGCTGGGGGTGGAGGATGGGGTGGGGAAGAAACCAT GCCAAGCAGTGAAAGGACTGATAATAGAATATTGCAGACACGCAGCCTTTCCTTCCCAAT CAAAATGGAAGCATTTGAAGGAAGGCTCTGGCTCAAGCCAGGGGGGCCTTGCTCTAATGA GTCACCTACTGCGTCGCCGCTGGTCAGCCTGATGTTGTTAGGATGGAAATGAGCTGGGGT TGCCAGATTTGGCAAATACAAAAACAGGACACCCAGGAGCATTGATGTTTTGGATGAACA ATGGAAAAGATTTTGGCGTAAATATGTCCTGTGGAATATTTGGGACACACATATTAAAAA CGTATTTGAAATTTGGCCAGGCGCTGTGGCTCACACCTGTAATCTCAGCACTTTGGGAGA CCAAGGCTGGTGGATCACCTGAGGCCAGGAGTTCGATATCAGCCTGGCCAACATGGTGAA ACCGCATCTCTACAAAAAATACAAAAATTAGCCGGGTGGGGTGGCACATGCCTGTCATCC CAGCTACTTGGGAGGCTGAGGCAGGAGATCACTTGAACCCAGGGGCAGAGGCTGCAGTGA GCCGAGATCGCGCCACTGCACTCTAGCCTGGGCAACAAAGAGAGACTCCATCTGAAAAAA CAAAACAAAACAAAACAAAATCTGAAATTCACATGCCACTGGGCATCCTGTGTTTTATCT GGCAATCCTGAGAAGAGTCTTAGAATGCTTGAAAAGAGCTTTAAACATCATTTCTTAAAA TGCCAAGCCTCCCTTTGGTGGCACTCCCCTTATAGCTGAGTGTAAGCTCTGGATGACAGG CACGTGGGTGCCAGGAGGCCAGGACCTAGGAGCGGGACGCTGACTCTCTGCAGCCCTCTC CTCTCACTCTCTTTTCCCTTCCAG]TCACAGTCACTGCAGCAGACATCATGGCTGTGGAT GTGGCAGAATACCATCTGAGCG *** ap000729.4 34215/37715-37771 phase +1 - [GGTCCCCGGGGAGACCCTCATCCTGCTGCACCCTGGGGATGAGCCTGTGACTCGGAATC CACTCACCGAGGCCTTCTGTGGAGACTGTCAAGTAGCCAAGGGAAAATAAGCCCAGGAAG GTCAAGGTTAGATTCATGGGGCGTTAAACTCAGAGACCACCCAGTCCAGAGGCAGAGGTT ATAGTGAGCTGAGATCACACCACTGCACTCCAGCTTTCCAGCCTGGGCAACAGAGTGAGA CTCCGTCTCATCAGAAAAAAAAAGAGGCCACCCAGTCCAGGGCCATGGCTCCCACCTTGT CACCCTTTGCCTCAGCAGGGAGATGGGAGCTGGCTGGGAGATGCCTCGAGACTCCAGACA TACTCCTGCAGCCCTCCCCATGGACAGCGGATGGGGTCAGAGAAGAAACATACCAGCCGT CTTTTCTCCCTTTGTTCCTCTCCTCATTCACAGATGGGAGAAGTGAGGCTTAGAGAGTAA CGGGGTCAGGATGTGCACTCAGGTCTCCTGACTCCCAGCCCCGTGCTCCCCATCACTCTA GCCCCTACCCTAACGCAGCCCCTGGGGAGCCCAGGGCTGATCTGAAGGGTGTGCCCGGGA ATCACCTTTCCCATCACTTTTTCCCAAAAGTGAGCCAGGGAGCCGCACTTTTCACCCTCA GGCTCACAGGTCTTGCCCCCCTGCCCCCACCCTGCCCCCTACCCGTATGGCCTTGGGCAA GTGGTGAAACCGGAACTTCTACTTACTTATCTGTAAAATGCAAAAGATGAGGCTTGCCTC AGGGCTGTTGGGAAGATTTAGAGAGCTGATGGTTGTGCAGCGCCCAGCATGGTGCAAACG CCACTCTTCCAGTGGCAGCGCTTTGCACACGCTGTTCCCCTGTCCTGGAGTCCTTCCCTG CCTCTGCCACTGCCTGCCTGAGTCCTGGCACCTGGTGGTGGGGTTATAGGTGCAGATCTG GACCCAGTCTGTCTGGAGGCAGATCTCTCCTCCGTCCCTCAGCTTCCTCATCTGTAAAAT GGGGAAAACAATAGAACCAACCTCACAGGATTGCCTTGACTCCATGGGTTAATATACGTG ACGTGCTTAGAACAGGGCCTGGCAAATCATAAATAGTAAGTGCTTCATAAGGGGAGCTAT TCCTCCTCCTCCTCATCCCACTCGTTTCTGGTCTTCGCCTAGACCCCACTTCCAATATCA CCCCAAGACTGGTATTCCATAAAATCAATAAATGAATGCGAATTGTCATTTCATGTCACC TTCCTGGGGCTTTTCCTTCTGTGCCCCCAGCCCTGCCCCCTTTTCTGCCACCCCGGGCAT GGGCTCCACCCTTCAGCTCCCAAAGAGCCTCAGGCACAGGGGAGCCTGAACCTGCTTTGC CACCTGGCTGTGCCCACAGCCTGCTTAGAGACCTTGGGCCTCTGGTCCTGCCCTCTAGCC AACCCCCGGCTACTACCCAGCCCTGCTGTGACCCTGTTCCCAGGACTCCCAGAATACACC AAGCCTTAGCAGGGCGGGGCCCGGGAGCCTCCATGGATCTCTTTGTCATGGGCATACGTA GCCCACAGGTGACATTCTGTCAACAGCGGCAGGAGGAAGGAGGGTTTCTTCACAGCCCTT CCACCGTCGTTACCCATTCCTTCTGTTTTTCCCTGGTCTGCCCAGCCCGTGACTATGTGC TGCGTGACTTTTGCGCACGTCACACGATTGCGTGATTAGACCATGTTGGGGATTCATTTT TTTCCTCTCTTAACAATGCCAGAAATGTGTCTCTGCATTGCCACAGTGCCATCCTAATGA CCTCAATTGTCATTCTCGAAGGCCAGTGACATTTCCTCCCAAGACAGAGCCACCAGCCCT CACTGGCCCCCTCGGTGGGACCTTCAGGCTGTCTCCAGATTTCTGCTGTTATAAATACAG CCTCGATGACTCATCCCAGACACAAAACCTGTTGGGATTTTCCCTTTAGAATAAATTCAC CAGAGTGGGACCGCTGGATGGGGGATGTTCTTGTCATCCGCATTTTCCAAACGGAGTATG AAGCCCAGAGGTGCTGGGTGACTTGCCTGGAAGCCAAGGTACCGGTGCCCGGCTCTGCCG TTTCTCACCGCTGGCCTTGAGTGGAGAAACAGATGTGCTCATTACCCTTCCTTGGTCTCA GTTTTCCTCTTTTAGAAAGTAGGGCCTTGGCCAGGGGCGGTGGCTCACGCCTGTAATCCC AGCACTTTGGGAGGCCAAGGCGAGTGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTG GCCAATATGGTGGAACCCCATCTCTACTAGAAATACAAAAAATTAGCTGGGCATGGTGGT GGACGCCTGTAATTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCGGGGA GGCAGAGGTTGCAGTGAGCCGAAATCGTGCCATTGCACTCCAGCCTGGGCAACAAGAGTG AAACTCCATCTC] ap000729.4 38028-40498 - TCATCAAGAGCCCCCCTGGCTGGGAGGTGGGTGTCTATGCTGCAGGGGCCCTGGCCCTGCTGGGAATCGC AGCTGTGAGCCTGTGGAAGCTCTGGACGTCGGGGAGCTTCCCCAGCCCCTCTCCGTTCCCCAATTACGAC TACAGGTACCTTCAGCAGAAGTACGGCGAGAGCTGCGCAGAGGCCAGGGAGAAG ap000729.4 42238-42431 phase= 0 - AGAGTGCCTGCCTGGAATGCCCAGCGGGCCAGCACGCGGGGACCACCCAGCCGCAAAGGCAGTCTCAGCA TTGAGGACACCTTTGAGAGCATCAGTGAACTGGGGCCTCTGGAGCTGATGGGCCGGGAGTTGGACCTGGC CCCCTATGGGACCCTCCGGAAGTCCCAGTCGGCCGACTCCCTGAACTCCATCTCCTCCGTGAGCAACACC TTTGGGCAGGACTTCACACTGGGCCAGGTGGAGGTGAGCATGGAGTACGACACTGCCTCCCACACGCTGA ACGTGGCGGTGATGCAGGGCAAGGACCTCCTGGAGCGGGAGGAGGCCAGCTTCGAGTCCTGCTTCATGCG CGTCAGCCTGCTGCCGGACGAGCAGATCGTGGGCATTTCTCGG ap000729.4 47393-47785 phase= 0 - ATCCAGAGAAATGCCTACTCCATCTTCTTTGATGAGAAGTTCTCCATCCCCCTGGATCCCACAGCCCTGG AGGAGAAGAGCCTGCGGTTTTCTGTATTTGGCATCGATGAGGATGAGCGCAACGTCAGCACGGGGGTGGT GGAGCTGAAGCTTTCTGTGCTTGACCTCCCGCTGCAGCCCTTCAGTGGCTGGCTCTATTTACAGGACCAG AACAAG ap000729.4 51220-51435 phase= 0 - GCCGCCGATGCTGTGGGGGAGATCCTGCTCTCCCTCAGCTACCTCCCCACAGCCGAGCGCCTCACCGTGG TCGTGGTTAAGGCCAAGAACCTCATCTGGACCAACGACAAGACCACAGCGG ap000729.4 52175-52295 phase= +1 - ACCCCTTCGTCAAGGTGTACCTGCTGCAGGATGGGAGGAAGATGAGCAAAAAGAAGACAGCCGTGAAGAG GGATGACCCCAACCCGGTGTTCAACGAAGCCATGATCTTCTCGGTGCCAGCCATTGTGCTCCAG ap000729.4 53326-53459 phase= 0 - GACCTGTCTCTCCGCGTGACGGTGGCTGAGAGCAGCAGCGACGGCCGTGGGGACAACGTGGGCCATGTCA TCATTGGGCCGTCAGCCAGTGGCATGGGAACCACACATTGGAACCAGATGTTGGCCACGCTGCGCAGGCC CGTGTCCATGTGGCACGCTGTCCGGCGAAACTAGCAACCAGGGCGGGCCAGTTGGGCAATGGAGCTGCTG *** GAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGT CCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATTGCAGCAGAGGAGTGGGCGTGGCT CTGTGTCCAGGGCCCCAGGGTCTGCTCCTGCTGAGGACCAGCTGTGGCTGGGCCAGGACAGAGGACTCAA CCCTGCTCCTCCCGGTAGGCCAGCTGCCGAGCTGGGCTATGTTCTGGAACCCAGTGAATCTTGGGGGCCA GGCACTGTGCTAGGCACCAGCAGGGGTAACACGAAGAAGACCCGGCCCTTAGGGCATCAGGAAGACTAGC TCCCCTGCCCCGGAGGATCTGCTCAGTGCTGATGGCAGCCCAGCTGTGTGGACTCAGGGGGCTCTGAGGG CTAGGGAAACAGGAAGGGCCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGGAAAAGAACTGAGC ATGTCGCAGGCAGCGGGCCCAGCCTGAGCAATGGCAGGATGTGAACTTCCCCATCGCAAATGCAGTTCTC AGCCCACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGAGACCAGGCCCGG GCAGCAGCCTACCGGCCACGTGGAACACTGGCTCCGGAGTTATTCTCTGTCAAATCTACTCCCCGGACCT CAACCATGGCAAGAACCAGAGGTCCAAAGAGGCCCAGACCCAGGTCCTTGTGCTCAGTCCTGCGCAAACC AGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAGGCCCACTGGGAGAAAGATGCCTCAGGCAGGT CTCAGCCTGGGGGTGGCAGGGGTGGGGCAGAGAGAATACTGACAGCAGAGGTCTTGGTGGGCTGCACGTG CCTGCGAAGATGTGGTGGACAAGGAGGCTCTCGGGCTGGGCCTTGGAGGGGTGGCAGCGGAAGGACAGCC CAGGTGGCTGAGGCCTGATGGGAAGCCGGGGAAGGCCAGGGTGGAAGGGCGGCTTGAGGGACGCCAGGAG AAGACTGAATGCCAGGCTAGGAAGGAGGCGGCTCTCGATCACGGGGTGGGTGCCCCCGACACCGGGTCTC CTAGCTTGAGTTCCCTAGAAGCGAAATCTGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGGGTGAGT GTTCTCAGAGAAACTTACCAGATCAAGAAAGGGAGCTCAGGCTGGATGGAGGAAGCCACGCAAGTGTGGC TTCAAGATCCATCGCCTTGGCCTGATCGCTGTGGGGGCAGGGGCCTGGAGTACGAGGGGCACCCTGGGGG CTCCCACCCAGAAGCAGAGGGGCTGGGCTGTTGCACCTCTACTGGCATCAGTCTTTGGTTACCCCCCAGC CCCAGTAGGAGGAGAGCAGGCAGAGCTTGTCATCCCCAGCCTGGTGTCCCGCAGTCCCAGGAAGCCGCTT CTTGCCTTCATGGCTGAGTGCTGGGAAGGGCTGAGCTCACCCAGGCCAGCAGGTGGGGTATCATCTGCTC GGTGGGGCCACCCACAGGTGACAGCATGGACCCTCAGGCTGGCTGCCCCTGTTCCTTGGTCCATAACTGG TGAGCTATGGAGACCCAGGCCAACAAATTATCCCCAGTGATATGGGGGGAGGAGGGGCTAGAACAAGGGC CCAGGGGACTGGAGGCAGGATGGTGGCTTTCCCTACCTGACACAGCCATGGCCCAGCCCCAAGGCCAGGC TGTCTACCCTATGGCCACAGCAGGAGGTCAGCCCAGGGCCAGGAGACACATGGCTGGACAAGGCTTTGCA GCCTGGGAGACCCCGACTTTCTCTAACCCAGTGGCTGTGCGGTGCAGGCCACTGACTCCCCCCCTGCCCT CTCCCCTCTCTCCCTCCCCCTAACTGCATGACATGTTAACTGTGTGCCCAGGACAGCCGTGGTGGGGACC GGGTATGCCAACTGGAATGATTCTAGAACCAAAATAAAGTTGGGGCAGGAAGAGGGGGCTTCCAGGGAGC ------ CCTGCTCGGCCCTGAATCACCTTCGTCTCTTCTCTAGGA ap000729.4 56166-58444 Note: RhoD gene at around 64432-79595 (bc001338) -------------------------------------------------------------------------------- 80. Homo syt11 (syt12) Hssyt11 Abundance high Chromosome 1 Size >25.7 Kb Transcript complexity affecting C2B and 3' ends MAEITNIRPSF^ DVSPVVAGLIGASVLVVCVSVTVFVWSCCHQQAEKKQKNPPYKFIHMLKGISIYPETLSNKKKIIK VRRDKDGPGREGGRRNLLVDAAEAGLLSRDKDPRGPSSGSCIDQLPIKMDYGEELRSPITSLTPGE SKTTSPSSPEEDVMLGSLTFSVDYNFPKKALVVTIQEAHGLPVMDDQTQGSDPYIKMTILPDKRHR VKTRVLRKTLDPVFDETFTFYGIPYSQLQDLVLHFLVLSFDRFSRDDVIGEVMVPLAGVDPSTGKV QLTRDIIKRNIQ^ KCISRGELQVSLSYQPVAQRMTVVVLKARHLPKMDITGLSG start2 MKLPLHRRGLCHRSVSLFLISLGAPD-join to P below ^(N)PYVKVNVYYGRKRIAKKKTHVKKCTLNPIFNESFIYDIPTDLLPDISIEFLVIDFDRTTKNEVVG RLILGAHSVTASGAEHWREVCESPRKPVAKWHSLSEY - AGAAGGCGGAGCCTACCTCTCATCAGGACCAGTCTGACTGCACCTGCATCCTTAGCTCAGCGCATCCCCG GAGCATCTTAAGAGCTGAGCGCAGCTGACAACTAGGGGCCGGACCGTCGCAGGAGGCGTCCGCTGGATAC CTTCCCCCTTCCCTGACCTAGAGCTCTACAGCTGCTGCCTCGGTACTGACCGAGGGTTCCCAGAGCTGTC TCACCATTGCAAAAACGTTATAGCAACAGCCT#CTGATTACGACATGGCTGAGATCACCAATATCCGACC TAGCTTTG *** cut from # to # below in some transcripts al139128.24 96022-96308 phase +1 - ATGTGTCACCGGTGGTGGCCGGCCTCATCGGGGCCTCTGTGCTGGTGGTGTGTGTCTCGGTGACCGTCTT TGTCTGGTCATGCTGCCACCAGCAGGCAGAGAAGAAGCAGAAGAACCCACCATACAAGTTTATTCACATG CTCAAAGGCATCAGCATATACCCAGAGACCCTCAGCAACAAGAAGAAAATCATCAAAGTGCGGAGAGACA AAGATGGTCCTGGGAGGGAAGGTGGACGTAGGAACCTGTTGGTGGACGCAGCAGAGGCTGGCCTGCTAAG CCGAGACAAAGATCCCAGGGGGCCTAGCTCTGGATCTTGTATAGACCAATTACCCATCAAAATGGACTAT GGGGAAGAACTAAGGAGCCCTATTACAAGCCTGACCCCTGGGGAGAGCAAAACCACCTCTCCATCATCTC CAGAGGAGGATGTCATGCTAGGATCCCTCACCTTCTCAGTGGACTATAACTTCCCGAAAAAAGCCCTGGT GGTGACAATCCAGGAGGCCCATGGGCTGCCAGTGATGGATGACCAGACCCAGGGATCTGACCCCTACATC AAAATGACCATCCTTCCTGACAAACGGCATCGGGTGAAGACCAGAGTGCTGCGGAAGACCCTGGACCCTG TGTTTGACGAGACCTTCACCTTCTATGGCATCCCCTACAGCCAGCTGCAGGACCTGGTGCTGCACTTCCT TGTCCTCAGCTTTGACCGCTTCTCTCGGGATGATGTCATTGGCGAGGTCATGGTGCCACTGGCAGGGGTG GACCCCAGCACAGGCAAGGTACAACTGACCAGGGACATCATCAAAAGGAATATCCAG al139128.24 104478-105304 phase 0 - AAGTGCATCAGCAGAGGGGAGCTCCAGGTGTCTCTGTCATATCAGCCTGTGGCACAGAGAATGACAGTGG TGGTCCTCAAAGCCAGACACTTGCCGAAGATGGATATCACCGGTCTCTCAGGTA al139128.24 117013-117136 phase +1 atypical gc intron donor - start2 AGACTCACATATAGTCAGTGTGTGTTTATTGTGCAATCACTAAAGAACACATGGGATGGCCATCAAAGAT ACGAACAACAGAGCCCCCCCTTTCCCAACATGAAATTACCATTACATAGGAGAGGACTGTGTCATAGGTC *** TGTCTCCCTTTTTCTTATCTCTTTGG]GGGCCCCAG]ATCCTTATGTCAAGGTGAACGTCTACTACGGCAG AAAGCGCATTGCCAAGAAGAAAACCCATGTGAAGAAGTGCACTTTGAACCCCATCTTCAATGAATCTTTC ATCTACGACATCCCCACTGACCTCCTGCCTGATATCAGCATCGAGTTCCTCGTTATCGACTTCGATCGCA CCACCAAGAATGAGGTGGTGGGGAGGCTGATCCTGGGGGCACACAGTGTCACAGCCAGTGGTGCTGAACA CTGGAGAGAGGTCTGCGAGAGCCCCCGCAAGCCTGTGGCCAAGTGGCACAGTCTGAGCGAGTACTAATCC *** TGTTCTTCTCTCCTCTAATCCCCGGGGGCCAAGCTGGGGAGGGATGTGGAGGGGAAAAAGATGACAGAGA AGTGGACTCCAAACCTCATTTTAGTTGTAGAAGAAAATTTCTTACAAAACAAATTCCACAAAGAACACCC TATATGACCACAGCTGCAGATCAGTTCTTAGCAATGATGTTTTTTTTTCTGCTTTGCAAGGCGCTAGAAT CTTTTATTTTACTTTATTTTTTTTGAGGTGGAGTTTCGCTCTTGTTGCCCGGGCTGGAGTGCAATGGTGA GATCTCAACTCACTGCAACCTCTGCCCTCCAGGTTCAAGTGATTCTCCTCCCTCAGCCTCCCAA%GTAGC TGGGATTACAGGCACCCACGAGCATGCCCGGCTAATTTTTTGTATTTTCAGTAGAGATGGGTTTCACCAT GTTGGCCAGGCTGGTCTCGAATTCCAG&ACCTCAGGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGG ATTACAGGTGCGAGCCACCGTGCCCGGCCTCTGGTTTTGTTTTGTTTTTTTTTTTTAATGGGGGACAAAA GAGAGGGAAAGACCCCTATAAATCTATATATAACAATGTAACCATATACTTGCATGTCTAATACAAACTG AAGAAATTAGCCTAACTGCCAATATCAAGTTGCAGATTTTAATCCATGGAAATTGTGTTTTGTGCTGAAT TGTATTTGCTGATTACCTGAAATTGGCTTCTTTTTATTGGGCTTCTCTGGAGAATTTCTCCCACTCCCCA CCTCTGCAGAAGAAAATTTTGCTCTTATAAAACCTCATGTTTTCATCA end 1 TTCCCATCTTTTCTTTTTATTGCCTCTTATATCTCTGCTCTTTGACCTCAAGGTCTAGAGGTCTGCAGTA AGCCAAGAAACAAAGGTGGGGTGGATGAGGCAAGGTTTGCAGGAGAAAGAGGAATTGAGAAATGGGGTAT TTTTGCTATCAGCTCTTCTGCTATGAAGTAGTAAAAGGCAGTCTATAATTAACTGACAGACCTAACTGAA GCACAGAGAATACATCAGACTTATGCATCCAAGACATCAGAACTTGGATTTTATCAAACTTGATGACTTC TCTAAAAGGAGCTTTGGAAACTTCAAATTCAGCTATAGGATAGTACCAATGAACACATCCAGCTGATCCC AAAAGCTGTTTTCAGGTATAAGGACAAGGAGAGGAGACAAGTGACGACAGCCATTCCCCTTTGCAGCTAT CTACTGTAGTGACAGCCATTTCTTGGTTGATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGC CTTTGTTTTTCTGGAAATGCCGACCATGGAGATGCTTTAGAGTCTTCTCAAATAGCTTAGATGTTGTAAT GAGGTTAGCTTTGCTTCATAAAACAGGGGCCCTCAGAAGTTCTCCTTAAATTTTTCAATAAAAATTTAGC TCTTAAAAAAA end 2 TAACAGTGTGACTGAGTGAATGAAGATAAGTTGGATTCTTTCAGAGCATTCTTTTCCTCAAAACGAGCTG CATAATTCTTGGAATTTATGTCTTACCACATGGTGGAGGGATGGAGGAACTACAGGATGCAATTCTTCTT CTACCAATGGGCAATAGAGGTTGAGAGAGATTCAGCATCTTTCTGGGATTAGAATTCAAGTCTCTTTACT CCTACAGCAGCTGTGTCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAACT TGGGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGTATTTTGGGAGGCCGAGGTGGAAAGATCGCTTG AGCCCAGGAGTTCAAGACCAGCCT#GGGCTACATGACGAAACTCCATCTCTATCAAAAATACAAAAAATT AACTAGGTGTGGTGCTGCACGCCTGTGGTCCCAG%CTATTCAGGAGGCTGAGGTGGGAGGATCATTTGAG CCCAGAGGTAGAGGCTGCAGTGAGCCATGATCATGCCACTGCACTCTGGGCTGGGTAACAGAGTGAGATC CTGTCTCAAAAATTAATTAATTAATTAATTAAAATAAACTAGGTAAACTTGGATAGGCAGTAGATATTTT TGCCCACCTGAGGAGGAACTCAGTCAAGCTGTTGCTTAACAGCTTGATCCAGGGCGTGAAAGGTTAGTTG AGACTGAAGTGTTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGGAAAGC TGAGTCTCTATGGACGGGGGGGTGATCTTGCTTTCAGTGTTCCCTCAGCTTTTGTGGATTTAAAACCATT CTGCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGCAATTCTGAGCAGTC ACAAAGCCTACTCTCTGTTCTTGTCCCTGCCAACCCCCACCCCCCATAATCTGACTCACAACTTCACCAT CAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAAATACTGTATCATAAGTAGAAG AAAATAATTTTTGTTTTCTAAAAATGCATTTTGAGATAGTTTAATGTAAATCTGACAGGAGCATTCTGAA GCCCCATTAGGAAAAAATTTAAATGGTTCCTCTTCATCGCCTTAATGTCTAAAGATCAGAAATCGCTGAG CAAACCCGCTTTTGTTTCCTTCCCAGAAACAATGCAAAACAACAGGTGGAGATAGTCTGGTCTTTGCCCT GCTGTGTGTGCCTCTGTAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC TTCCCCATTTCCTTGTAGCTTTATTCCTTGCATCTTTGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAG GGGAGGAACCAGTTGTTCTGTAGCCTAGGAACTGCCTCAGTGTCTTTGCCAGAAAAAGGCAAAGAGGCGG ACAGTGCAGGGCTCCTCCCTCCTACCTCAGGCCTGATCCATCGTGCCCTTGACTTTGCCGTCTCAAAGTT TCTTAGCTGACTTTGGCTTTCACATTTGTTCTTTCCAGAGCTAACTGATAAGAGTGGAGGAGGAATGCCT TCTCCTAAGAGTCAGTTGAAAGAAAGACAAGAGAGTCACATCTTAGCTTTTGCACAAGGCATTCGTGGTC AGGAATAGGTTAGGGAATGGTCACTTCTGATTTTCCAACAGTTGCTCCTTCTCTGAAGAGATCTTGATTC CTTTGGGAAGACAAGAATTTTTCTTAATAACAAAGGTCCCTTTATGAGTTATTCCTTCTTTCAGTTCATC TCACTGGAGCACAGCCAAGATGGACATGTTTATGGACAGTGCTCTAGATGTGAAAACAGATAGAACTGGT TTGTGGGACAGGGGCAGCTTGCTCAGGAGAGGGAATAACGCAGGTCCCTTTTCTTGGAAGGCTTGTACTA TGGCCATGACAGTGACATTGCCCTCACCATGATCCCTCTCCAAAGTGGTTGTCTTTCTTTACCTTGTGTC TTCTCTTGTAAAAATGAAACTCAAAAATAAAATAAATGTGTC AAATTTTG end 3 AAAAAAAAAGAAAACTGAAAAAGCTAACATGAATTGTGTGAAATTGCATAATGCTGTAATGCTAATCTAC AATATGTAATGCTATCTTGTATGTTGAATTTGTTAATGCACCACACAAGTGCAAAATAAAGACTGATTCA CATTA end 4 al139128.24 117536/117693/117702-118840/119481/121559/121704 fist pickup at atypical gg intron acceptor note deletions between % symbols or & symbols in some transcripts -------------------------------------------------------------------------------- 81. Homo syt13 Hssyt13 Abundance moderate Chromosome 11 Size >46 Kb MVLSVPVIALGATLGTATSILALCGVTCLCRHMHPKKGLLPRDQDPDLEKAKPSLLGSAQQ^ FNVKKSTEPVQPRALLKFPDIYGPRPAVTAPEVINYADYSLRSTEEPTAPASPQPPNDSRLKRQVTEELFILPQN^ GVVEDVCVMETWNPEKAASWNQAPKLHYCLDYDCQKAELFVTRLE^ AVTSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDR FSRHSVAGELRLGLDGTSVPLGAAQWGELKTSAK^ EPSAGAGEVLLSISYLPAANRLLVVLIKAKNLHSNQSKELLGK^ DVSVKVTLKHQARKLKKKQTKRAKHKINPVWNEMIMFELPDDLLQASSVELEVLGQDDSGQSCALGH CSLGLHTSGSERSHWEEMLKNPRRQIAMWHQLHL - GGCGGCGGGAGAGCTGCTGGCTCGCCCGGATCCCGGGAGCTGCCTGGAGGCGGGCCCGGCCCGGGGAAGG TGAGCGGCTGCGGGACCCAGCCCCTCGCCGGGAGCGGGCACCATGGTGCTGTCGGTGCCTGTGATCGCGC *** TGGGCGCCACGCTGGGCACAGCCACCAGCATCCTCGCGTTGTGCGGGGTCACCTGCCTGTGTCGGCACAT GCACCCCAAGAAGGGGCTGCTGCCGCGGGACCAGGACCCCGACCTGGAGAAGGCGAAGCCCAGCTTGCTC GGGTCTGCACAACAG ac013602.4 8492-8786 phase 0 - TTCAATGTTAAAAAGTCCACGGAACCTGTTCAGCCCCGTGCCCTCCTCAAGTTCCCAGACATCTATGGAC CCAGGCCAGCTGTGACGGCTCCAGAGGTCATCAACTATGCAGACTATTCACTGAGGTCTACGGAGGAGCC CACTGCACCTGCCAGCCCCCAACCCCCGAATGACAGTCGCCTCAAGAGGCAGGTCACAGAGGAGCTGTTC ATCCTCCCTCAGAATG ac013602.4 38932-39157 phase +1 - GTGTGGTGGAGGATGTCTGTGTCATGGAGACCTGGAACCCAGAGAAGGCTGCCAGTTGGAACCAGGCCCC CAAACTCCACTACTGCCTGGACTATGACTGTCAGAAGGCAGAATTGTTTGTGACTCGCCTGGAAG ac013602.4 40418-40552 phase +1 - CTGTGACCAGCAACCACGACGGAGGCTGTGACTGCTACGTCCAAGGGAGTGTGGCCAATAGGACCGGCTC TGTGGAGGCTCAGACAGCCCTAAAGAAGCGGCAGCTGCACACCACCTGGGAGGAGGGCCTGGTGCTCCCC CTGGCGGAGGAGGAGCTCCCCACAGCCACCCTGACGCTGACCTTGAGGACCTGCGACCGCTTCTCCCGTC ACAGCGTGGCCGGGGAGCTCCGCCTGGGCCTGGACGGGACATCTGTGCCTCTAGGGGCTGCCCAGTGGGG CGAGCTGAAGACTTCAGCGAAG ac013602.4 42100-42401 phase 0 - GAGCCATCTGCAGGAGCTGGAGAGGTCCTACTATCCATCAGCTACCTCCCGGCTGCCAACCGCCTCCTGG TGGTGCTGATTAAAGCCAAGAACCTCCACTCTAACCAGTCCAAGGAGCTCCTGGGGAAGG ac013602.4 48312-48441 phase +1 - ATGTCTCTGTCAAGGTGACCTTGAAGCACCAGGCTCGGAAGCTGAAGAAGAAGCAGACTAAACGAGCTAA GCACAAGATCAACCCCGTGTGGAACGAGATGATCATGTTTGAGCTGCCTGACGACCTGCTGCAGGCCTCC AGTGTGGAGCTGGAAGTGCTGGGCCAGGACGATTCAGGGCAGAGCTGTGCGCTTGGCCACTGCAGCCTGG GCCTGCACACCTCGGGCTCTGAGCGCAGCCACTGGGAGGAGATGCTCAAAAACCCTCGCCGGCAGATTGC CATGTGGCACCAGCTGCACCTGTAACCAGCTGCCCAGCTGCCTCCCTTCTTGGACAGCCCTGACCCGTCC *** TCTGCAACCTCCTTTCTGTGCCCCTTTCCTCATTCTGACACCCAGAAGACAGTGACAGATGTGTTTGCAA GGCTGGGATGGCTCTCTCATCATACTCTTGTTTCTTAGAAATAAGCAAGACAGAGCAGGAAATGGAATAT GCGGGTCACACTGAGGAATGCATTTTGCTCATCTGTGTTATTGAAGGAGGTGCTTATTAAATACAGTTCC TATGCCTGTTTTATAGGTGGGGTTAGGCCAGATGCAGAGAAAGCTAAATGTGGGAATCATGGATGCAAAG AAGAATTTGGCTTTTTGAAAAACAAGCATTTCAAAAATGATGAAGGAAGTGAAAGTATCCTGGATCAACT CCTAGAGTTAGAGATTGCCCAGGTGGAAAGAAACCTTAGCCAGCGTTCAATCAAGCTCACCATGCAGGGC AGTCACCCGGCAGTTCTCAAACTTTAGCATGTGAAGAGTCACCAGCAGATTCCTGGGCTCGCCTGGAGAC ATTCCTAGTCGGTATTCCTGGTCGAAGCCCAGGAGCCTTCCTTTTTAACAAGCTGATGTAGAGGGTGGAG CACTGTATGTGGAGAAATTCCTTCTACAATATTCCACACAGGTTTTTGGCCACAGTCCTTGATGGAGTCC CAAAACCATGGTGCAGCCAGTTCCAATGCTGGACACCTCAACCATCAGGGTGAAATCTGGGGCCTCAGCT TTTTAATTTAATTATTTTAATTCTTAATACTTTAATTTGTGCATTTCATAAGCCCCCTGCTCTTGGACTG AATTTTGTGCTTTTTATTGAAGAATTTTATTGTTTTTATCTTAAAATCAGTTTCTATTATCCTTGGGGAG ACCATCCCTAACAAAGTACAGGTGGGATCTCCTGTGAGTCATTGGCTGGGTTCTGATTGCTAGATGTCAC ACCCACCAGCATCACCAAAGTGACTCTGAGATAGACCGGTCCCTTCTCAGCGTTCCAGTCACTTCAGGAG GAATTTAGTTATTGACTTAGTCTATGACATCTGGCTACATGTAGGTAGAGAAGAAAGACAATTTTAAAAA GGAAATCAGGTCTTTTGCAACTGTGCCTCCCTCTGTCTGTTTTCACTTGAATGGGTAAATAACCAGCAGC TAGGTTTTGAATTCCTACCTTGTTATTCTAAACAGATGTCCACATTGTTAATTAAATCTAAATTATGAGC CTTGCTGAGTGGATACGGTACTTACACCTGAACCAGGATTCCTGGGTTCTGTTGTTGACATTGCCCTTCA GCACCTGTTTGGCCAGCTGTATAAGATAGGACTAATGACTAGGAAGCCTACCCCAATGAATGATATACTA GATGAAATAGTGTTCAAAACCTGTAGGCACTCTCTGGCTAAAAACAAACTCTGAGGCCACCAGCAGATCA TCTTTAAGCTAAGTTACTATTTTTCACCTTTTTTTTTAGACGGAGTTTTGCTCTTTGTTGCCCAGGCTGG AGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCGATTCTCCTGTCTCAGC CTCCTGGGTAGCTGGGATTACAGGTGCCCACCAACATGCCTGGCTAATTTTTGTACTTTTAGTAGAGATG GGGTTTCACCATGTTGGCCAGGCTGGTCTTCAACTCCAGATCTCAGGTGATCTACCCTCCTCGGCCTCCC AAAGTACTGGGATTACAGGCCTGAGCCACCGCGCCCGGCCTATTTTTCACTTTAATTTGGCAGCTGAGAA TGCCCAAAAAGTGCCAGAAGCATCGTGGCATTTCCAGAACCATGGATTCTGCCTTTGGACCCCTCTCTAT TAATATTAAAACTCTGGGCCTTCAGATGTCACCCTAATCCACTGCCCTAAGACAGAATTTCTGGACAAGA TGGGTAAGGGCTTCATTCCTTCAACAAGTCAAGTCATACTTGGCCTCTCCCTGAGAATCTGAGCAGGAGC CTTATAACCTGTGGTCATTATTTTTTCTTTCTGTACAGAAATAGAAAAGCATTAGAAATAACTTCTAACC ATCCTCTGAAAAAACAGAAAAAATATCGAATCCCTCTTTCATGAGAAGTCTTTTGGATAATTGGAAACCT TCATCACTGAGGTTGGCCAGCCCCTGCCAAGTGTTGTGTAGGCAAAGCACTTGTTAGTGGCTTCCTATGA AATGTTTTAGAGATCTCTTCACCATACTGGTTTCTTCTCTTTGGTTGGTGTGGGTAAAAGAAAACAAAAC ATTTCCTATAAGCTGAAAGCTGACCAGCATTCTCTTCTTGGTAACATCTACTACTCCAACCTAGAAAATT TGGATTCTAGACCAAAAATCAGGAAACATGGCTCCTTATAAATCTGTGCAGCTGCCTTATAGTACCATCA AAGGAATTTCAGGTGGGCTGGGCGGGGCCCCGATCCCAGAATTATCAACTCCACCCATCATCATTTGGTC ATGAAGCATCCTTTCATTCTTCTTCTTCTTTTTTTTGGGGGGGGCGGGGCGGGGGAGGGATCTCAAAGTT TTAGTCTTCCAGAATCCAAATTAAAGGTTGCCCCTGATGGGGGCCAGGTTCCGCCACAGAACATCTTAGA TGTCAGCCTTGACCTCACTTAGCAGGGATTACAGAAATGAGATACATTTTGAAGGAGAGTTGTCTGTTAT GTTCACTGTATTCTAAGTGCCTGGGATAAAGCTGTCTCATGGGTGCTCCATATATATTCATATATATTTG TTGAGTGAATTAATGAATTAAGAGTGGCTGGCAGAGTAGGCAGAAAAAGACACTGCAAATGGCATAAAAA TTAAAGTCCTAGCTGAGTTCTCAATGGTAAAGGCATCAGATGTCTTAGCAGTCAAGCTAGAAATTCATGA CAATGAGTATTACTATTTGCCTAATGACAACTCATTGCTCTCCATGTAAATGTAATCAACAGATGAAGAG AATATAATTGCTCTGCTTTTCCACTAAAACTCCATCTTAGTGAATTTTAAATTATCCAGAGATGTCAAAC TGCCAAATAAAAATATTTCAGTAGTCTTTGCATCAGCTTACCTTGTACCAGAAACATTTCCAATTTACTA TCAAATTATAGTAACTGAGCCTGTGTGAAGTATCTCATCATTTTCGAAAGGAACACCTTGTGTGATGCCA GTGAGCATTTCTAAAAAGGGTGTGAGGTAGAGGTAAAAATAAGGTGAGAGACCATTTCAGAATGCACTGT TGCTCAAAAAGGTGATCTGGTTCTTTCTTCAGAGATTTCTACGGGGATAGAAAATCGGGAGTCTGCCCTC ATTAATCTGTGACTCCACCTCTTGCATCAAATCAATATCTATTTGTTGAGCACTTATTGATTAAGACCTT GCATATGTCTGTCCATTTTGATTTGAGATACAACTTTTTGTGTGGGTTGAATGACAAATCACTCCAAACA AAACTGGGCACAGAGAATCAGCTAGGAGACCAGTTATTCAGGGTCCATTTCTCTTGGATGTAAAGGAGTC CTGGGTAAAATGTGGCTGTAACCTAAACCAACTAGTCCTTGTGATTTGTTTCTGCCCTCTGTGTTTCCTG TTGTCAAATGCTAAGTGTGTGTTTTGCAGTCATGAACTAAAGCACAAAAAGATGCATGAGACATTGTAGT CATATGTCTGGTGTGACACTTTGGAGCAAAAACCTTGCAGTGGTAAATAAAAAATTTCCAACAGGGT end 1 CAGCTGCCTGGTGTTTTCTTTTTTTCCGTTTTACCTAATATTTTGGCATATAAAATGCAGAAGAAATCAT CTGATAAGCACTTATGAGCCACTGCCATGTTTAATAAAACTTGACAACTACA end 2 most end at 1st site ac013602.4 50468-54524/54646 -------------------------------------------------------------------------------- 82. Homo syt14 Hssyt14 Abundance low Chromosome 1 Size >226 Kb Transcript complexity affecting Nterm, Cterm and 3' ends Note that a transcribed locus on chr4, overlapping the gonadotropin releasing hormone receptor (GNRHR) locus, encodes the C terminal portion of hsyt14 on the antisense strand. MAIE^ GGERTCGVHELICIRK^ VSPEAVGFLSAVGVFIILMLLLFLYINKKFCFENVGGFPDLGSEYSTRKNSQDKI^ - alt.Nterm YNSYMDKDEHGSSSESEDEALGKYHEALSRTHNSRLPLADSRQRNYAWETRQKYSPLSAEYDGYSSEASIDE^ GNCIQRMRRTPPLDELQPPPYQDDSGSPHLSCTPSEIGDSKCEFSHCSNSPRCSYNKCPSEGSTGHEIE SFHNKGYEEDVPSDSTAVLSPE^ DMSAQGSSSQLPKPFDPEPEAKYGTLDVTFDYDSQEQKLLVTVTAVTDIPTYNRTGGNS[WQVHLVLLPIKK QRAKTSIQRGPCPVFTETFKFNHVESEMIGNYAVRFRLYGVHRMKKEKIVGEKIFYLTKLNLQGKMSLPVILEP SYNHS^ (if readthru then: VSISSNGLNTVYVHGL-end) (if earlier pickup then: WAVTPK-end) GCDSQMSVSEMSCSESTSSCQSLEHGSVPEILIGLLYNATTGRLSAEVIKGSHFKNLAANRPP^ - alt.Nterm (TFHPLLS](D/N)GLFCCLKHLIGGQVYIIR^) sometimes skipped DTYVKLTLLNSMGQEMSKCKTSIRRGQPNPVYKETFVFQVALFQLSDVTLILSVYNKRSMKRKEMIGWISLGLN SSGEEELNHWTEMKESKGQQVCRWHALLES - AGCGCGTCCTCCGCCAGCCCTCGCGTCTGCTGCCCCCGCCATCCAGTTGGTGCGGTCCATGGCGAGCGCA TCATGGCGATTGAAG *** al022399.2 35151-35235 phase +1 - GTGGAGAGAGAACCTGTGGAGTACATGAACTTATCTGTATTAGAAAAG al022399.2 49667-49714 phase +1 - sometimes skipped, not open [AATCTGGAATCTGAGTGCATGCTGATCTCCCATTGACTTCTGTTCTATTACTGTACCCCATCAGAGAGAT GTGAGGAGTTGGTTGAAATTCAAATCGGGAACATATCCAAAGACCACAACATCCTTTGACACCAACAACT GTCTATGCTTCCTTAGAAGGAGCCACCTGACAACTGGGTGGTTCAACAAAGTGGCCCCAGGAAAG] al022399.2 50013-50217 - sometimes skipped, out of frame [ATAGGGTATTTCTCTGTGGCCAGGCTGGAGTACAGTGGCACCATCTTGGCTCACTGCAACTTCCGCCTCC TGGGTTCAAACGATTCTTCTGCCTCAGCATCCCAAGTAACTGGGACTACAG] al022399.2 62851-62971 - TATCTCCAGAGGCAGTTGGATTTTTGTCAGCTGTTGGGGTGTTTATTATCTTGATGCTGCTCCTTTTTCT *** CTATATTAATAAGAAGTTCTGTTTTGAAAATGTTGGCGGGTTTCCAGATCTTGGTTCAGAATACAGTACA AGGAAGAATTCACAAGATAAAATTT al022397.1 (83077-82913) phase +1 - ATAATTCCTACATGGACAAAGATGAGCATGGTTCATCCTCTGAAAGTGAAGATGAAGCGCTGGGTAAATA TCATGAGGCCTTATCCAGAACACACAATTCCAGACTACCACTGGCAGATTCTAGACAAAGGAACTATGCT TGGGAAACAAGGCAGAAATACAGTCCTCTATCGGCAGAGTATGATGGATACAGTAGTGAAGCATCAATAG ATGAAG al022397.1 (75671-75456) phase +1 - GAAACTGCATTCAGAGAATGAGAAGAACACCCCCGCTGGATGAATTGCAGCCACCACCATATCAGGATGA CAGTGGTTCTCCCCATCTGTCATGTACACCCTCAGAAATTGGGGACAGTAAATGTGAATTTTCCCACTGC AGCAACAGTCCAAGATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAAGTT TTCATAATAAAGGATATGAAGAAGATGTTCCAAGTGACAGCACTGCAGTCCTGAGCCCTGAA al022397.1 (2388-2117) phase 0 - GATATGTCAGCTCAAGGATCATCTTCGCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATG GCACACTGGATGTGACTTTTGACTATGACTCACAAGAACAGAAGCTTCTGGTAACAGTGACAGCTGTCAC AGACATCCCAACATATAACAGGACAGGTGGCAACTCATG[GCAAGTACACCTTGTTCTTCTACCTATAAA GAAACAGAGAGCAAAAACCAGCATCCAGAGAGGACCATGCCCTGTCTTCACAGAAACATTTAAATTTAAT CATGTTGAATCTGAGATGATTGGAAATTATGCAGTTCGGTTTAGACTGTATGGTGTACATCGCATGAAAA AAGAAAAGATTGTGGGGGAAAAGATTTTTTATTTAACAAAATTGAATCTTCAAGGGAAAATGTCATTGCC TGTGATATTGGAACCTTCTTACAATCATTCT[GTGAGTATCTCATCAAATGGCCTGAATACAGTTTATGT TCATGGTTTATAGTATGCACAATTTTAAAAATCTTTAATCAAGCCAACAAGTTTGTCAGTCTATTTTTTT *** ACATAGTAATCATGCCTTTACAAAAATATCTAAGCCCTGGATAGATAGATATACTTTTTCTTACCTAAAA AAGTTGCCCTTGAAGATAATTTGTGATTTATGTCTTTTATTTTATCCTTCACAGAGTTTTGGCCCAGGGT TTTACATGTTTTTTGTTGTTGTTGTTGAACATTTATTAAATGTTTGATTATGAAGTCATCC end1 al513263.9 5307-5485/5756/6065 ealier pickup (atypical gc donor) results in frameshift and termination in the next exon second pickup is in frame, phase 0 - GGCTGTGACTCCCAAATGAGCGTGTCAGAAATGTCGTGTAGTGAAAGTACATCCTCATGTCAGTCTCTTG *** AACATGGCTCAGTTCCAGAAATTCTTATTGGCCTGCTTTATAATGCCACAACTGGAAGACTATCAGCAGA AGTGATAAAAGGCAGCCACTTCAAAAATTTGGCAGCAAACAGACCACCCA al513263.9 61016-61205 phase +1 equivalent chromosome 4 region ac096727.3 (121102-120915) - [CTTTCCACCCCCTGTTGTCAG]ATGGACTGTTCTGTTGTCTAAAACACTTGATAGGTGGACAGGTTTAT ATAATCCGAG] al513263.9 64695/64716-64772 atypical tg acceptor at start phase +1 - ATACATATGTTAAGTTAACTCTACTGAATTCCATGGGTCAAGAGATGTCCAAATGCAAGACATCCATCCG CAGAGGGCAGCCAAATCCAGTATATAAGGAAACTTTTGTCTTTCAAGTGGCCCTATTTCAGCTTTCTGAT GTGACACTCATACTGTCTGTGTATAACAAACGCAGCATGAAAAGAAAAGAGATGATAGGCTGGATTTCTT TAGGTCTCAACAGCTCTGGAGAAGAAGAACTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACAGCA AGTATGTAGATGGCATGCGTTGCTAGAGTCATGATGAATAGAATAAGCAAGCAGTTACCATCAAAGGCAG *** CATATTTCCAATTCCAACATTACTGTTTCTACCAAGTCCCATTAGAAGAGCTGTTCTTTGAAGAATCATA TTCAACCTTCTACCAAAATGCTTTAAGTTCTATGGAAAGAACGTCTCATACTGACATAAATGAAGAAAAT ATGTGTATCTAGTAGAGCTTGTTTAGGAAACTGAGAAACGTACACTATCATTGCTAAACTAACAGTCCTC CAGAAATTTAATAAGATGTTTTTGATTTGAAGTTAATTTTAATTTAGCAAAAGAGCCAGTCATTTTATGA AAAATCAAAATTATAAGTGATTTTAAAAACCAGAATTTTAGTTGCAATACAATTTTAATATCACCCTACA TATTATTTATAAAACATAGTTTGACTGGCCAGTCCCTGGTGTTTGTAATGTTCTTTAATATGAAAAAGTA GTTCTCCAACTCTATCATAAGTCATATCTAATGGTGAAGGGTTTCAGTCACATTGAAAATTGTTTTATTT CAGGCATGTTCCCTTTGTGCACTTAGGTTCATTGTGCCTCAGTTCCTCTCAAAAGCACTAAATCTAAGTG CAAACAAGTATTCATTTTCATACAGGAATTTTTTTAATATGTTATTTTTTTAAAAGTTCATTTTTCATTT GCCTCCGCTTTCGCCTGATCCAAAGAGACCAAGTCACTGTACTGGTCCCTTGCAAGTCTTCTAGACAGGT TGTACTGTAGAACTACGTAACTTTCTGTTGAAAGCACTTCCTGTATTCTTGTATTCCAATGTAGGAAGCT AATAGAGCAGGACTTTACTTTCAAATTTCTTTCAGTGATTGACTCTTCAAAATTGCAGTAGTGTGAAAAT ACATTTTTTACAAACTGAAAATACAGTAGATAAGCTGTCGAAAATGGAAAACAATTCAATTTTAATTTTC TGCTCTGAGTATTTAGTAACCAACACTGCGTAAAGCAGGTAGCATTCAAAATAAGAAACTGTTCTCTCTC TAAATCTTCACTCTTACTTCAATTTATATTTGTGATATGAAGACTATCCAGTTCTCAGTTTGAATTGGAA CATCATGTTAAAAACAGTTATGAGATTCCTTATGAAGTTTCTAGTAACTTGTAACTAGACTTTATGAAAT TAACAGATAAAGTTCTTCAACGTG end 1 ATGTCATCTTGTGCCTTTCATGTAAGTTAAATTTGCTCATACAGCTTGAACGTTGTATTTGCAAAATTAA GCCTTCGATTTTTATAAATGTAAAGATTCCTCAGAACAGTGTCGCAAGATCTTTATTTCCTCTGAAGTAT GTAAAAGTTGTATAATGTGCTAACTTTTTAATGGCAAGGCACTTTCATTTGTTTTTATATTTAGGAACTC TAATCAGGAATATTATAAGCTGTTTTCTTTTTAATTTTGCTTCTTACCTAATATATCATTTTATGCATAT ACTTTATCAGAGTATGTTTTATATATATTAAAAATAGTTTCTTTTTTCTCCTTCTCATTTCTAGTTAAAA TAGACAAAAACATACTATTTACCAGTTACTAAAAAGCAGTATATCATTGCTTCTAGTCCCAACTAAGTAC TATATATTATTGTAAACTAGAACTTGTTATTACCATAATAACAAAACAATGCGTAGATATTACTTCAGCT TGGCTGTACTGAAAGGCCTTAAAAGAAACCCAAAAAGACCGTGAACTTCTGTATTTTTTTAGTTTAAAAA ATGGCAGCTCTATGCATTCATACACATGAATTATAAGAAAAAATACAAATGCTATATTGGATGACATGAG GTTTGAGAATGTGTGTTACAGGGCTGCATTAAAGGGAAAAATCCATCTTTTATTGTTACATCAATGAGCT TTTTCCAGGATTTTTCAAATAAACAAGTAAGAGTTAGAACC end 2 TGAATCAAATGGCAAAATATCTCATTTAAGTGTTTTCAGCAACAGTATGAAAAAAGACTTGAAGAGGGGA TGTAGATTTTACTGAGAAATTGGACTTAGGCATTTGAAGCTATAATGAACTTTTTAGACTTTGAAACAAC TGACTGCATTGCTAACAACTGTTATCTTCCTAATAAAAAGAGTTATCAGTCTTATCTGTAACTGTAACAG AGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACCTAACTAAT TGTTATTTGTTAAATCTACCTTTTTTCAGACTATTCCCAGAATTGTGTGTGTGATTTGATACATCCCTAG GGATTTATCTGGCATAAGTATCAAATCCTTCATGGCTTAAAAATTAATAAACAGTTTTTTAATATTTCTG GAAAGACCCTACCTCCACCCCAGCTGCCAAGTCCTCAAAGATTATAAATTATCTATATGAGTGTATGTAT CTGTATACACACATGCACCATTACACATACAACATAAATATGTATATGTATATTCATTTGTAAAGGCAAA GGTGCCCTGGCTTTTTCAGATAACTGAATAGAAAAACATTTCATACATTTAGGATTATTTTTCTCCTCTA TGTATTTACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACACAGCAAAAT ATACATTTGTTTCTGTAGATTGACACAACTTATAATAATTACTCCCAAAAAGTTGTCTGTTCTTTTAGAA AAGGATTAAATAAGGCTCAGGGGACCCACTTCACTCTACTGAATCTAATGTACGAGACAGTACTACTGCT TCTTTGTGTGCTTGAATTTGCATGAAAGCTTAATAGCAAAATCTTCTATCTCAGTAATTATAGCAAATAG GGACCTACTGGTAGGGAGCAGGTGTTGGCTCAGAAACCTGAAAAAGACAACCCACTTTCATACAGTTCTA TTAAAATCCCCTAAGTTTTCTAATAAAATGATATAGTCCAAATATGGCAATCGACTGGCATTTATGGGAG CCTCTAAACCTGGAATTATGGGGTTTATTTTTCTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCA GTAAACAAAATGTATGTCAAATCAGTAAAGAATTTGTTTAGCATAATATTGCCTTATCTTTCAGAAGCTT TCTTCTATATTCTTGTGTCTTCAGTACAATCCACTTTTGTTTGAAATCCATTTGCATATTATCTTACTGT GCATTTAGTGAATTCTCAATAATGTTGTATTTGCTGACAAGAATAATAAATTGGACCACAATT end 3 al513263.9 66024-67517/68258/69581 equivalent chromosome 4 region ac096727.3 (120914-118672) -------------------------------------------------------------------------------- 83. Homo syt16 (syt14r) Hssyt16 Abundance low Chromosome 14 Size >289 Kb Transcript complexity affecting Nterms MATD^ ITPEAIGFLSAVGVFIVLLAVLFLFINKKLCFETIGGLPFLEHRGKRKHSKDKTGIHKGL^ alt.Nterm MVLAMASQDVQNFFQPFSSWISRVYEALQQAGDMLSASLVNISKQDSKLSDKLDQDLD NIQIQETYFEDEEQDNDWSQEDANSLFLEVDHFSCCNSDLQDSAQNSSPSLSQHAKDSCS TMSQWPNWASDDRKLPHVLSSIAEEEHHLEKQRSGLQHGFDSQLPGTLETVNGKKQ^ VNSFGDDEELSTSSDSDEEVIKQFEISVSRSQSFRSVTSEKGKQTGLEQKPKFSRSLLTHGEDGTEVSACE^ DLDGASQRRYSENLSYGEDDHIPAHSQSPCERGDAKHHGTSHQESSVVQSLRRQSTEGSLEMETA FNSRGFEDSYATDSSSMWSPE^ EQDRTNLQVPSGVSEPISKCGDLDVIFEYRAASQKLTVTIVRAQGLPDKDRSGVNSWQVHVVLLPGKKHRG RTNIQRGPNPVFREKVTFAKLEPRDVAACAVRFRLYAARKMTRERMMGEKLFYLSHLHPEGEMKVTLVLEPRSNIS^ - alt.Nterm SGGSPLSPSAVSHSDSTSSTQSLSHGGAPELLVGLSYNATTGRLSVEMIKGSHFRNLAVNRAP^ DTYGKLFLLNSVGQEMSRCKTSIRRGQPNPVYKETFVFQVALFQLSDVTLMISVYNRRTMKRKEMIGWI ALGQNSSGEEEQDHWEEMKETKGQQICRWHTLLES - start 1 GAGGGGCTGTGCGCGGCGCGGCCCCCGAGCGCACCGGGCCTGCCGAGGAGCGCGCGCCCGGCCGGGCTCG GCGCCGGTTTCCCGAACCTGGGCGGCCGTCGGGCAGCCCCCTCGTCCGACCATGGCGACTGACA *** al137918.4 (144500-144367) phase +1 - TCACTCCTGAAGCCATTGGCTTCTTGTCTGCTGTTGGGGTCTTTATTGTTCTTCTGGCCGTCCTCTTCCT CTTCATCAACAAGAAGCTGTGTTTTGAAACGATAGGAGGCCTTCCTTTCCTGGAGCATCGAGGGAAAAGA AAGCATTCTAAAGACAAGACTGGGATTCACAAGGGGCTGG al356018.5 41688-41867 phase +1 - start 2 GGGTCTGAGGTTGTAACTTTAACAGGTGTAAGTATTTCTTTCCTCTGTTTCAGCTGGAAGTTTTGAGAGT GAAATATTCACAGCCATTAAGAGACCTCCAAATTAATTTCTCAACATGCTTATTCTATAGTTCACATTCA ATCCAGAGCACTGAAGGAACTGAACAACTGGACACTGTAGACATCAGATAGCTGGCCATGGTGTTGGCCA *** TGGCGTCTCAGGATGTTCAGAACTTCTTCCAGCCTTTCTCTTCCTGGATATCTCGGGTTTATGAAGCTCT CCAGCAAGCAGGAGATATGTTATCTGCTTCGCTGGTTAACATAAGCAAACAAGACTCTAAATTGAGTGAC AAACTAGATCAGGACTTAGATAATATTCAGATTCAGGAAACGTACTTTGAAGATGAAGAACAAGACAATG ATTGGAGTCAAGAGGATGCAAATTCCTTGTTTCTTGAAGTGGATCATTTCTCATGTTGTAATAGTGATTT GCAGGACTCTGCCCAAAATTCAAGCCCAAGCCTTAGCCAACATGCAAAGGACTCATGTTCCACAATGTCC CAGTGGCCCAATTGGGCCAGTGATGACCGCAAGTTACCACATGTGCTTTCTTCTATTGCGGAGGAAGAGC ATCACCTTGAAAAGCAAAGAAGTGGCCTTCAACATGGCTTTGACAGCCAGCTCCCTGGTACTTTAGAAAC TGTTAATGGAAAAAAGCAAG al356018.5 67379-68098 phase +1 - TCAACAGCTTTGGGGATGACGAAGAGCTGTCCACATCTTCTGACAGTGACGAGGAGGTGATCAAACAATT TGAGATTTCCGTGTCCCGGTCCCAGAGTTTCCGTTCAGTGACATCTGAGAAAGGAAAGCAGACAGGATTG GAGCAGAAACCAAAATTCAGCCGTTCGTTGTTGACACACGGAGAAGATGGCACAGAAGTATCTGCCTGCG AAG al390816.4 33735-33947 phase +1 - ATTTGGATGGAGCCAGCCAACGGCGTTATTCTGAGAATCTCTCCTACGGTGAAGATGACCACATCCCTGC TCACTCACAGTCCCCATGTGAAAGAGGGGATGCCAAACACCACGGCACATCTCACCAAGAGTCCAGTGTG GTCCAAAGCCTCAGGCGCCAATCCACAGAGGGCAGCTTGGAGATGGAGACAGCTTTTAATAGCCGGGGAT TTGAAGATTCCTATGCCACTGACAGCTCCTCCATGTGGAGTCCAGAG[GCAAGTTATTTGTTTTTCATTC TTTCATTGGTTCCCTTTCCCCTTCCCCTCTTTCCACTCTCCTTTCTCATCTCTCTAAAAAAAAAAAAA end 1 al390816.4 39267-39523/39613 atypical gc donor phase 0 - start 3 TGAATCTTAAAAGAAAAGGATATTTATTAGATGTCTACTGTCTGTCAAGTCCTCTACTTTTTACAACATC CCTACACAGAAG al390816.4 43479-43560 - GAACAGGACAGGACCAATTTGCAGGTGCCATCCGGGGTCTCAGAGCCCATCTCAAAGTGTGGTGACCTAG ATGTCATCTTTGAATATAGAGCCGCCAGCCAGAAGCTCACAGTGACCATTGTGAGGGCACAGGGCCTCCC AGATAAGGACCGAAGTGGTGTCAACTCCTGGCAAGTTCATGTAGTGCTGCTGCCTGGTAAGAAACACAGG GGCAGGACGAACATACAGAGAGGGCCCAACCCCGTCTTCAGGGAGAAGGTCACCTTTGCCAAGCTGGAGC CCAGAGATGTGGCTGCCTGTGCTGTCCGCTTCCGCCTGTACGCTGCCCGGAAGATGACCCGAGAGAGAAT *** GATGGGAGAGAAACTATTCTATCTCAGCCACCTGCACCCAGAAGGGGAAATGAAAGTGACTCTGGTTCTG GAGCCAAGAAGTAATATAAGC al390816.4 44966-45406 phase 0 - AGTGGAGGGTCTCCGCTCAGCCCATCTGCGGTTTCTCACAGTGATAGTACTTCATCCACGCAGTCGCTGT CTCATGGAGGGGCGCCAGAGCTGTTGGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGA AATGATCAAAGGCAGCCATTTCCGAAACCTCGCTGTTAACCGAGCACCTG al390816.4 48328-48517 phase +1 - ATACATATGGAAAACTCTTTCTCCTCAATTCTGTGGGTCAAGAGATGTCCCGTTGCAAGACGTCCATTCG GCGTGGTCAGCCCAATCCTGTCTATAAGGAGACCTTTGTTTTCCAGGTGGCCCTCTTTCAGCTGTCTGAT GTCACGTTGATGATTTCCGTTTATAACAGGCGTACTATGAAGCGTAAAGAGATGATTGGCTGGATTGCCC TGGGCCAGAACAGCAGTGGAGAGGAGGAACAAGATCACTGGGAGGAGATGAAGGAAACCAAAGGCCAGCA GATCTGCAGATGGCACACTTTGCTGGAATCCTAGGTTTGCTAACCTGCATTTGTGTGCTGTGTCCACCTT *** GGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTC CACTAACCCCTAGGACATTGTGAGTGGGAGTTTTGGGTTTCTCAATGGTCTGATTTGGATTTAAATATTG TAATTTTAAAAACACACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACTG ATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGGGGTGAAGCTTCTTCTGCTGTC TCTGTTTGCTTGAAGAGTAACCTGAGATTGCAAGGGAGCTGTTAATTGTTACTATTTGCAACCATTTAGG TGGATGAATCAGAATTTTCTTAATATGGTACAAAAAACTCCAAAATATAGATATGAATCAGATGCTGAGC CTCATAAAAGAATCAAACTCTAATCCATAAACTCTTATTTCACATTTTTCTCTTTATCAAAGAAACCTAT TTACCTAACGAGTAAATATTATAAACTTGCACTTTTAAAATAAATTTGTATTAATTAAATACCTCTTTTA TCTTATATTTTGTGGTTTCTATGAGATTTGGTTAGATGAATCATTTTGAAGCAAGAAAAGAGTTCAGAAA CTACTGTTTTAAGACAACTTGTCTCCTTTTGAATATGTAAGATTTCAAACTTGTGACTTTCAAGGTTTTT ATGCTGTCTTTCTCACCCAATAAGTTCTTACAGAATAAGAAAACAAAAAACAAGACTACTGCAGTCATAG ATTTATTGATTTTTTCTGCTTCTGGTGTTCTTTTGGATTATCCTTTTTCTATGTTCAATTATATATACTC ATATATGAATATTTTGAATGTACTGCATGTAAACCATGCTCTTTTTAAACTGAGTATTTTCCATCACTAG AGCATAGTAAATTGTACACAGTGAGTCCTTAATAAATATTGATTTGATTGACTCTT al390816.4 64526-65841 -------------------------------------------------------------------------------- 84. Homo syt15 Hssyt15 Abundance low Chromosome 10 Size >16 Kb Transcript complexity affecting Cterm MA^ EQLALVIGGTIGGLLLLLLIGASCCLWRRFCATLTYEELPGTPAMATTAASSGQRDRPCQPHARTQLS^ RPPAVPFVVPPTLQGRDWVPLHSGEWADAPWDPCPASELLPHTSSGGL^ GDACMVGAINPELYKFPEDKSETDFPDGCLGRLWFSVEYEQEAERLLVGLIKAQHLQAPSETCSPLVKLY LLPDERRFLQSKTKRKTSNPQFDEHFIFQ^ readthrough in bm690782: VQPLEQAGSGALRVAGKVQTYRRAQPPVPARALQPPGPLMPPAH... VSSKTITQRVLKFSVYHVDRQRKHQLLGQVLFPLKNETLVGDCRRVIWRDLEAESLE^ PPSEFGDLQFCLSYNDYLSRLTVVVLRAKGLRLQEDRGIV^ SVFVKVSLMNHNKFVKCKKTSAVLGSINPVYNETFSFKADATELDTASLSLTVVQNMEGD readthrough in aa366967: SKATPYPGLLGWGPRGAAECSGRVSASCPDLRRSCTSSLPG-end ^KSQQLGRVVVGPYMYTRGRELEHWDEMLSKPKELVKRWHALCRTTEP alt.Cterm ^KQATTVELFLFHLTSG alt.Cterm - ATGGCGG *** al356056.22 (157922-157916) phase +1 - AGCAGCTGGCCCTGGTGATTGGGGGCACCATCGGGGGGCTGCTGCTGCTGCTGTTGATCGGGGCAAGCTG CTGTCTGTGGAGAAGGTTCTGTGCCACCCTCACCTATGAGGAGCTGCCTGGGACACCAGCCATGGCCACC ACAGCTGCCTCCAGTGGGCAGCGGGACAGGCCCTGCCAGCCGCATGCTAGGACCCAACTGAGCAG al356056.22 (156927-156723) phase +2 - GCCACCAGCTGTGCCATTCGTGGTGCCCCCAACCCTTCAAGGCCGAGATTGGGTGCCCCTGCACAGTGGA GAGTGGGCCGATGCCCCATGGGACCCCTGCCCGGCATCAGAGCTGCTGCCTCACACCTCCAGCGGCGGCC TTG al356056.22 (156197-156055) phase +1 - GAGATGCATGTATGGTGGGGGCCATCAACCCAGAGCTGTACAAGTTCCCGGAGGACAAAAGTGAGACCGA CTTCCCCGACGGCTGCCTGGGGCGGCTGTGGTTCTCGGTGGAATATGAGCAGGAGGCTGAGCGGCTGCTG GTGGGCTTGATCAAGGCACAGCACCTGCAAGCCCCCTCGGAGACCTGCAGCCCCCTGGTGAAGCTCTACC TGCTGCCCGATGAGCGGCGCTTCCTCCAATCCAAGACCAAACGCAAAACCTCCAACCCGCAGTTTGACGA GCACTTCATCTTTCAG al356056.22 (155195-154900) phase 0 - bm690782 readthrough GTACAGCCTCTGGAGCAGGCAGGGTCTGGTGCCCTCCGCGTTGCTGGGAAGGTGCAGACCTACAGGAGAG CCCAGCCTCCTGTACCAGCCAGGGCTCTGCAGCCCCCGGGACCCTTGATGCCACCAGCTC end bm690782 al356056.22 (154899-154770) - GTGTCCAGCAAGACCATCACCCAGAGGGTGCTGAAGTTCTCCGTCTACCACGTGGACAGGCAGAGGAAGC ACCAGCTCCTGGGCCAGGTGCTCTTCCCCTTGAAGAATGAGACCCTAGTGGGGGACTGCCGGCGTGTCAT CTGGAGAGACCTGGAGGCCGAGAGCCTGGAG al356056.22 (153359-153189) phase 0 - CCCCCCTCGGAGTTTGGCGACCTCCAGTTCTGCCTCAGCTACAACGACTACCTGAGCCGCCTGACGGTGG TTGTGCTGCGTGCCAAGGGCCTCCGGCTCCAGGAGGACAGAGGCATTGTCA al356056.22 (152596-152476) phase +1 - GTGTGTTTGTCAAAGTGTCTCTGATGAACCACAACAAGTTTGTCAAGTGCAAGAAGACTTCAGCTGTGCT GGGCTCCATCAACCCTGTGTACAATGAGACCTTCAGCTTCAAGGCCGATGCCACCGAGCTGGATACCGCT AGCCTCAGCCTGACTGTGGTGCAGAACATGGAAGGGGACA al356056.22 (151493-151314) phase +1 - aa366967 readthrough GTAAGGCCACACCCTACCCTGGGCTGCTGGGATGGGGACCACGAGGGGCTGCCGAGTGTTCAGGCAGAGT GAGTGCCTCCTGTCCTGACCTCAGAAGGAGCTGTACGAGCTCCCTCCCTGGTTAAGGAAA *** al356056.22 (151313-151184) - AGAGCCAGCAGCTGGGCCGAGTGGTGGTGGGCCCCTACATGTACACCCGCGGCAGAGAGCTGGAGCACTG GGACGAGATGCTCAGCAAGCCCAAGGAGCTGGTGAAGCGCTGGCATGCGCTCTGCCGCACCACGGAGCCC TGACCCTTCGCCCAGCACCGCGGTTCCGCTTTGGGAGCCGACCATCCTCGCAGTTGCATGTGACAGCCAC *** AGCCACACGCATGGACGTTTCATCCAACAGCTCCCCGAGCTGCCAGCCAGCCCGAGCCAGGAGGACGTGA GTGCTGATATGCAGGAGAGAAGAGGGGACAAAGAAGCCCTGGCCCGGTCAGCGGCTCTGGCCATACAGCC TTCCGACACACTCCCTCCTCCTTATCTGCGGGGCTGCCTGGGCTCGGAATCCCGGCTCCTGGTCCTCACA GCCCTGATTTGGACCAGAATCTCAGATGCTCAGAAGAAAGATCCTGTTTAGTGATGACCCAGCTCTACCT GCTGAATGGACCTGCAGGGTAAACTTGGGTGCCTCCATCTGGGAAAGCTGATGATGTGTTCATGCAGTCG ATGACCCTCACTGCTTTTTCAGCCAGGGTTTCTCTGCCTTCTGCCTGGCAGAGAAAACACACTGCTATGG GGAAAATCACAGGGAGGGCGCTGTGACCAGCGCACTCAGGCACCAAGTGTCGGCATGGCTCACTGTGCTG GGTGAAGGCCTCCCCGAGCATTAGGTCCTCCACGGGGCTGTGTCAAATGCCCTCCCACATTGTGTCAAGT CTGCCCATGGCCCACCCTCCCCACAGTCCAAAACCACACAGCCCTGGTTCTCCAGCTGTTCTGCTGCTGT TTCTGTGCTCTCCCTGATTAAGAGCATTCAGTTCCTGGGCTCTCCCTTTGAGCAGGAAATGGTGAAAGCA TGTGGCTATGGTATAGCCCACAGGGCTGAGATTGCTGTGTTGCAGTATTGATGTAAAATTTGTTAAGAAG GAAGTACCCACAGATCACTGCCATCAACTCCCCAGAAGTTGCACTCAAGCTAGTGAGCAGCCCTTGTGCT TGTCACAGTTACTGTAACAGGTAGTGTGTATTTGCACCTGGCATCGTGCAGCCTGCACGTCAACACGTTG TTTTGTGTAACTAGAACAGCACATGGAACCACTATCTCTTTCTCTTTTTTCCTTCTTTTTCTTTTTTTTT TTTTTATTTTAATTTTTTGAGACGGAGTTTCCCTCTTGTCACCCAGGCTGGAGTGCAATGGCGTGATCTC GGCTCACTGCACCCTCCACCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATT ACTGGCGCCCGCCACCATGCCTGGCTAATTTTTTTTATTTTTAGTAGAGACGGAATTTTACCATGTTGGC TAGGCTGGTCTCAAATTCCTGGCCTCAGGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAG GCATGAGTCACCGCACCCAGCCCGACCAGTATCTTTTTCTTATGCAGTGAAACAACTTTAGCAAAAGAGG CAATGAATGTTATACTGAGTTTCTACCTCTTTAACTCCACCTCCAATTTCTGTCAATCTACAAACACAAG TGTCGCCTCGCAGTGTTTCGTATGAACAGAATATCTTGTGTTTGCTTTTTGTCACTTATTTCACTTGCAC ATTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGGCTGG AGTGCGGTGGCGCGATCTAGGCTTACTGCAAGCTCCGCCTCCCGGGTTTACTTACACCACTGTCCTGCCT CAGCCTCCGGAGTAGCTGGGACTACAGACACCTGCCACCACGCCCTGCTAATTTTTTGTATTTTCAAGTA GAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCTACCCGCCTCGGCC TCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCCCACTTGCACATTTTCAAAGTAGTCCG CAAAGCTGTAGTTTCTAATAGCTTCATAGCTCACATGTAATAGGGGTTCTCTGTGTGTTTATAG]AGCAG GCTACTACAGTGGAACTGTTTCTGTTTCATCTGACATCCGGATAGATGCCAGCCACCCCCACATTCCAAG *** [GTGAGATTTCTGACTAGCAGTGACTTTTCTAGGGCCGCTTGGAAAAGTTGATAAGTATCCTTTTCTGCAGG ACAGAGTAGACTGGTATCTCTGACTCATCCCTGAAAAATCTAAATGGCAAGAGACTAGCTGGCTCTCTGC TCTGATGGGGAGGAGGTTGTTGTTTGGGCTGTTCTCTACAGACATAGTCAGGGCAAAAAGCATACGCATG CTTCCCATGGACCAGAGAAACCTGGCCTGGGTTGTCTCAAATCCTGTCCACAAGGCAACTCCAGAAGAAA GAAGCCCTTTACATTTCCATAAAACACTTTAGAATCAGCTAGTCAATTTCCACAAAATAAAGTGCTAGAA TTTGATTGGATTTAATTGATTATGTAGAACAATTTGGGGGCCATTTGACATCATTAAAATATTCAATCTT CCTATTCATTAACATGGTATATCTCTTCACTTTAAGTCTTTTGTATGTTTCTCAGAACTATTTTTGTGGT TTTCAGTAAAGTGTTCTTGCACATCCTTCAATAGATTTATTCTTAGACGTTTTATATTTGTTTATGGCTA GTATATACAGATTCTGTTGCTACAAAACTATGTTGACCTTGTTATCCAGTGAGAGGCTTTGTGACATTCA TTTAAATTGTAATAATTTGCAGATTATTTTTGTATAATCATGTCCTCTGTGAATGACAGTTTTATTTCTT CCTTTCTTAATCTTTATGCCTTATTTAGCTCTTGCCAAACTGCAGTGGCTGAGCAATTGGACAAGATAAA GAAATAAAAGTGATCCAGATCATAAAGAAAGAAGTAAAACTATATCTGCACATGACATAATCTTGTCTAT GGAAAATCCTAAGGAATCCACACACAAAAAAACTACTAGAGCTAATAAGTTTGGCAAGGTTGCAAGATAT AAAATTGGTATACAAATTGCAGTGGCTAGGACCTCCAGCAGAATGCTGACTATAAGTAGTGATAGTGGGT ATTCTTGTCTCATCCTCAATCTCAGGGGTGGTGGGTGTGGCATGTGGAGAGTTGTCAATATTCACCATGA AGTTTGATGGTTGTTATAGGATTTTTAATGTACTCATTAACATATATTCTCAAGCTGTTAAAAAGATTTT TTTAATTACAAATAAGGTTAAATTTCTCTCAAATACTTACTCTGCACCTTTTGAAATAATTTTATTTTTC TCCTTTATTCTTTGGATGTGATGACTTATACTAATTGACTGTTGAATGTCAAACCAAACTTAACATTCTT GTAATAGAAACCAGCAGGGTGTGTACACTTTTGTGTGTGTGCGCAGGTTTATACACATAAACACAACAAT ACTTGGACTTATTTATTTAAAATTTAGATTTATTAGAGGGAGCATGGCCATAAAATAAAATAAAATAAAA TTTAGATTTAAGTCGAGCTCAGTGGCTCACATCTATTATCCCCGCACTTTGGAAGGCCAAGGCAGGTAGA TTGTCTAAGCTCAGGAATTTGAGACCAACGTGGTGAAACTCGGTCTCTACAAAAACCACAAAAATTAGCC AGGTATGGTGTCACATGCCTGTTGTCCCAGCTACTTGGAGGGCTGGGGCAGGAGTATTGCGTGAGCCCGG GAGGTTAAGGCTGAAGTGAGTCATGTTCACGCCACTGCACTACAGCTTGGATAACAAAGCGAGACTCTGT CTCCAAAAATAAAATAAGTAAATAAATAAATAAATAAAATTTAGATCAATTTGCTGTTATATTTTTATAT AAACTATGTTTATGACATAAGTATAAACAAAAAAATAAAATAAGTAAATAAATAAATAAAATTTAGATTA ATTTGCTGTTATATTTTTATATAAGCTATGTTTATGACAGACTTTCCTATAATATTCTTATCATAATGTT CTTGCACTTGAAAGAATGTGCATTCTGCAGTTGTGTGCAGGTGTTATGTGTATTTCAACTGGGTCAAGTT TGTTAATCAGGTTGGTCAAATTATCTACATCTTTACTGATATTTTTGTCTGTTTTTCTATAAATTACTGA GAGAGGATAAAGCCTGCCACTGTTATTATGAATTTGTTTATTTCTCCTTTGAGTTTTGTTAGTTTTTGTT TTATGCATTTAGAGGTTGTGTTATTAGGCTCATACCCATTTAAAATTGACGTTTTCTGGTAGAGTGAACC TTTATTATGTGAAATGGCTTTCTCTACCACTCACAATGGTATTTTTTTCACTTTCCCCCTTATTTTTGAA TTTTCAATGTTCTTATAATGATGTCATGTCTCTTGAATAGAGTTGTTTTAATCAAGTCTGTCAAATTTTG TCTTTTGTGTATTTCGTGAATTTACATTTATTGTAATTACTGATATAGTTGTGTTCATAAATACCATCTT ACTACTTGTTTCCATTTGTCTTACCCATTTTTGTTTTTATTTTTTCTTTTCTGTTGCTTTCTTTCTGATT ATTTTTTTAATTCCGTTTCCCCCCCTACCATTGGTTCTACTTACACATTCTTTTATAATTTCTTTAGTGG TTTCCTCCACAGATTACAACTTCTGTACATTATTATAATCTAATACAAATTTTACTTTTTATTGTTTCCC AGACAATGCTATGATCTCACAATACTCAATCTCTATTTACCTCCATTCTACTCTTGCATGTATATTATTA TTACTCATTTTAATTTCACATATATTTTACACCTAACGAGACATTATTATTATTGCTATGTGCAGTCAAT ATTCATTTGTATTCACCCACATATTCACTCTGTTTTTTTTTATTATTTCCTGCATTTCTGTGATTCTATC ATAGATCAGTTTTCTTCTACCTGAAGAATTCCCTTTAGTATTTTTTGTGTATGCACATCTGCTGGCAGCA AATTTTCTCAGGTTTTTTTGTGTTTTTTTGTTTGCTTGTTTTTGAGACAGGGTCTCACTCTGTCGCCCAG GCTGGAGTGCAGTGGCATGATCATGGTTCACTGTAGCCTCAACCTCCTAGGTTCAAGCAGTCCTCCCACC TCAGCCTCCCGAGTAGCGGGACTACAGGCAGGCACCACCATACCTGGCTAATTCTTTTGTATTTTTTGTA GAGAAGGGATTTCACCATGTTGCTCAGGCTGGTCTCAAACTCCAGAGCTCAAACAGTCTGCCTGCTTTGA CCTCCCAAAGGACTGGGATTACAGGCCACCTCACCCAGCCTTTCTCAGTTTTTGAATAGAAACATCTATT TCAAATTCATTTTTAAGTATATTTTGTGAATATAGGATTACAGGTTGACACTTTTTTCTTTGAGGAACTT CAGAATGGCACTCCATTATCTTCTCACTTCCATCATTTCTGTTGACAAGTGATTTTCAGTGCTATTGTTT CTCCTTTGAGAGTAATGTGTCAGTAACATGCACTGGCTCACGCCCGTCATCCCAGCACCCTTGAGCCCAG GAGTTCAAAACCAGCCCAGGCAACAGAGCAAGATCCCCCCCCTCTACAAAAGAAAATGACAGGAGGGAGG CAGGAAGGAGGAGAGAGGGAGGGAGGGGAAAAGAAAAAAGAAAAGAAGAAATGTGTCCCTCCTACCTGCC TCTAGCTGCTTTTACTGTTTTTTCCTTGTCTTTCATTTGCAGCAGTTTAAGTATAGTGTGCCTGGGTTGG GTGCGGTGGCTCACGCCTATAATCCCAGCAGTTTGGGAGGCCAAGGCCAGTGGATCACCTGAGGTCAGAA GTTTGAGACCAACCTGGCCAACATGGTGAAACCCCGTCTCCACTAAAAAATCCAAAAATTAGCCAGGCAT GGTGGCGCGTGCCTGTAATCCCAGCTATTCGGGAGACTGAGGCAGGAGAATCGCTTGACCTTGGGGAGGC GGAGGTTGCAGTGAGCTGAGATCGCGCGCCACCGTACTCCAGCCTGGGTGACAAAGAAAAACTCCGTCTC AAAAAATAATAATAAAAAAAAAGTATAGTGTGCCTGGATGCAGTTTTGTTTTTATTTATCCTGCTTGGGG ATCATAAAGCTTTATCAGTTTTGGAAAGTTCTCAGGCTATATTTATTTAACTGTTCCTTCTGCCCCATCT TCCTCCCTTCTAAGACTCCAGTTACATATGTGTTAGGCCTGTTCACCACCTCCCACAAGTATCTTATGTT CTTTGCTGTATTTTCCATACTCTTTGTCTCTGTTCTTCAGCTTAGAGTTTTTATTCTGTCCTATATTACA GTTCAAAGAATGTTCCTTCTGCTAAATCTAATTGTAGTTAACCCATATGCTAAGTAGTTAATTTCAATTA TTGTATTTTTAAGTTTTAAATTTCCATTTCATTCTTTCTTATAG]ATTCCAGTTCTTTGATGAAAGTCTCT ATTCCACCCATCAAGTCTGTGTCTGATAACACCAATATCTGGGTCATTAGTGGCTCCGTTTTGTTGTGTC TGTTTTCCCCTCCTTCCTGTTTTGTGGTGTGTTTGATCACTTATTGTTGAATGCTAACCATTATAATAAA TTTTAGTGGCTCCAGGAAACAT end 1 GATCTGAAAACAATGTCTGTCTCAAGGGAGGGTTTACCATGTCATCTG ATAGACAGAGTGGGAAGATTTTACCTTAATCCAATGGTACCGAACTGACTAGAGTCTATGTTGCAGTTTT TGGAAGGCTTCATCTCCATCTCTGGTTTGCCCGTCTATCTAGAGTGTGGTCCTCCAAGGATTCCAACTGA GTGTCTGATGTGATTATTAGGCTTCTTTTCCTTGGTGGGTCCTGAACTCCAACTTTTATCTCATTAATAT GACACTGCCAAAACCTGCTGCTTTTCATAGCCTTTCTGCATAGCTTAACTCAGCAGATGCCTCAAGGGGA AAGTGTTCCTTTTCTGTGTCTCCCTTCTACATGATATCTCGGCCCCTTCAGTTCCAGCTGCCTTGACAAC CTCAGTCTCCATTTCTTGTCTCTCCAGCTGAAGACGACTCTGCTGCCTTTGCTGCCTCTTAGCTATGGCC GTCTGCCCAAATGCTCGGCCTCTTAGCTAAAATCAGCACGTTTCCTGAAGGGAAAAGTAGTTCACAGAGG GCCAGCTTGCCTCCTTGTGTTTTTCTTCTTTTGAGATTATGACCCTTCAAATGTTTGTTAACTGGGAAGC TTTCCAAAAACTTTTTAAAAAAGTTTTCTGTGTTTTATTCAGCCTTTCCAGTTGTTCTTGGAATGAGTGT TGGTCTGCCTCAAGCAGAAAAAAAATTCTCAGAATTCTTTTCTCAGAAAAAGGATTCTCAGCAGAGAGTG ATTTTATACAGGGAATGGGATTAAACAATTCTTGGGAAAGCTGGTGAAGCCAACGAGGGAACAGTTACTT TTATCAGTGTGCAATTTTTTTGCTATAATGGTGCATAACAACTAATCACAACATGTCAATGCCATACTTA AATAAGCACTCATTTCTAACACATCTGTGGGTTGGCTGGAGGTGGTCTGAGCTAGGGTA al356056.22 (149586/147492/143102-147418/141968) -------------------------------------------------------------------------------- 85. Arabidopsis sytB AtsytB Abundance low Chromosome 1 Size >2.7 Kb Agrees with T20H2.13/At1g20080 gene prediction http://www.arabidopsis.org MGIISTILGVIGFGFGTTIGIVIGYYLFIYFQSTD^ DPEIKPLVELDSETIATMFPEIPMWVKNPDFDR^ IDWLNKLIGHMWPYMDK^ AICKMAKSIAKPIIAEQIPNYKIDSVEFEMLTLGSLPPSFQ^ GMKVYATDDKEIIMELSVKWAGNPNIIVVAKAFGLKATVQ^ VIDLQVYATPRITLKPLVPSFPCFANIFVSLMDK^ PQVDFGLKLLGADVMAIPGLYRFVQ^ EIIKDQVANMYLWPKTLNVQIMDPS^ KAMKKPVGLLSVKVIKAIKLKKKDLLGGSDPYVKLTLSGDKVPGKKTVVKHSNLNPEWNEEFDLVVKEPE SQELQLIVYDWEQ^ VGKHDKIGMNVIQLKDLTPEEPKLMTLELLKSMEPKEPVSEKSRGQLVVEVEYKPFKDDDIPENIDDPNA VEKAPEGTPSTGGLLVVIVHEAEDLEGKYHTNPSVRLLFRGEERKTK^ RVKKNREPRWDEDFQFPLDEPPINDKLHVEVISSSSRLIHPK^ ETLGYVVINLGDVVSNRRINDKYHLIDSKNGRIQIELQWRNSS - ATGGGAATAATCAGCACAATATTGGGTGTGATTGGTTTTGGATTTGGAACAACGATCGGAATCGTCATTG *** GTTACTACTTGTTCATCTATTTCCAGTCTACTGAT phase 0 ac022472.2 (49700-49596) - GATCCTGAGATCAAGCCATTGGTGGAGTTAGATTCAGAGACTATAGCAACAATGTTCCCTGAAATACCTA TGTGGGTGAAAAATCCTGATTTTGATCGT phase 0 ac022472.2 (49403-49305) - ATTGACTGGCTTAACAAGCTTATTGGCCATATGTGGCCTTATATGGACAAA phase 0 ac022472.2 (49219-49169) - GCTATCTGTAAGATGGCCAAGTCAATAGCCAAACCCATTATCGCTGAGCAAATTCCAAACTACAAAATCG ATTCAGTTGAATTTGAAATGCTCACTTTGGGTTCATTACCACCAAGTTTCCAAG phase +1 ac022472.2 (49067-48944) - GAATGAAAGTATATGCAACTGATGACAAAGAAATTATCATGGAGTTGTCAGTGAAATGGGCAGGGAACCC TAATATCATTGTTGTAGCCAAAGCATTTGGGTTAAAAGCTACTGTTCAG phase 0 ac022472.2 (48850-48732) - GTGATTGATTTGCAAGTTTACGCTACTCCAAGGATTACTCTGAAGCCTTTGGTTCCATCATTCCCCTGTT TTGCCAACATATTTGTCTCTCTTATGGATAAG phase 0 ac022472.2 (48658-48557) - CCACAAGTCGATTTTGGACTGAAGTTACTAGGTGCAGATGTAATGGCGATTCCTGGCTTATACCGATTTG TCCAG phase 0 ac022472.2 (48476-48402) - GAAATCATTAAAGATCAGGTTGCAAACATGTACCTATGGCCAAAGACTTTGAATGTTCAAATAATGGATC CTTCTAA phase +2 ac022472.2 (48297-48221) - AGCTATGAAGAAACCTGTTGGATTGCTTAGTGTGAAGGTCATAAAGGCAATAAAGCTTAAGAAGAAGGAT CTTCTGGGTGGATCAGATCCTTATGTGAAATTAACACTCTCTGGAGACAAGGTTCCTGGTAAGAAGACAG TTGTTAAACACAGTAATCTGAATCCTGAATGGAACGAAGAATTCGATTTGGTTGTTAAAGAACCAGAGAG CCAAGAGCTACAGCTCATTGTTTATGACTGGGAACAG phase 0 ac022472.2 (48134-47888) - GTTGGTAAACATGATAAGATAGGAATGAATGTGATTCAACTCAAAGACCTTACACCAGAGGAGCCAAAAC TCATGACACTCGAGCTCTTAAAATCCATGGAACCAAAAGAGCCAGTTAGCGAGAAATCGCGTGGACAGCT CGTGGTTGAAGTCGAATATAAACCTTTTAAGGATGATGATATTCCAGAGAACATTGATGATCCAAATGCA GTAGAGAAAGCACCAGAAGGCACACCTTCTACTGGTGGCTTGCTTGTGGTGATAGTTCACGAAGCTGAAG ATCTAGAAGGCAAATATCACACTAATCCTTCTGTTCGTTTGCTATTCAGAGGAGAAGAGCGTAAGACAAAG phase 0 ac022472.2 (47809-47459) - CGTGTGAAGAAAAACAGAGAACCGAGATGGGATGAAGATTTTCAGTTCCCATTAGATGAGCCTCCCATAA ACGATAAGCTACACGTTGAAGTCATAAGTTCTTCTTCAAGACTAATTCATCCCAAG phase 0 ac022472.2 (47374-47249) - GAAACTCTTGGTTACGTGGTGATAAATCTTGGGGATGTTGTGAGTAATCGGAGAATCAACGATAAGTATC ATCTGATTGATTCCAAGAATGGTCGTATTCAGATTGAGCTTCAGTGGAGAAATTCTTCTTGA *** ac022472.2 (47155-47024) -------------------------------------------------------------------------------- 86. Arabidopsis sytA AtsytA Abundance high, but no evidence for expression of alt.Cterms Chromosome 2 Size 3.4-12.7 Kb Agrees with gene prediction F26H11.25/At2g20990 but alt. splicing predicted here Possible transcript complexity affecting C2B MGFFSTILGFCGFGVGISLGLVIGYVLFVYLLPNDVK^ DPEIRSIADQDPKAMLRMLPEIPLWVKNPDFDR^ VDWINRFLEYMWPYLDK^ AICKTAKNIAKPIIEEQIPKYKIDSVEFETLTLGSLPPTFQ^ GMKVYLTDEKELIMEPCLKWAANPNILVAIKAFGLKATVQ^ VVDLQVFAQPRITLKPLVPSFPCFANIYVSLMEK^ PHVDFGLKLGGADLMSIPGLYRFVQ^ EQIKDQVANMYLWPKTLVVPILDPA^ possible alt.Cterms KAFRRPVGIVHVKVVRAVGLRKKDLMGGADPFVKIKLSEDKIPSKKTTVKHKNLNPEWNEEFKFSV RDPQTQVLEFSVYDWEQ^ VGNPEKMGMNVLALKEMVPDEHKAFTLELRKTLDGGEDGQPPDKYRGKLEVELLYKPFTEEEMPKG FEETQAVQKAPEGTPAAGGMLVVIVHSAEDVEGKHHTNPYVRIYFKGEERKTKHVKKNRDPRWNEE FTFMLEEPPVREKLHVEVLSTSSRIGLLHPK^ ETLGYVDIPVVDVVNNKRMNQKFHLIDSKNGKIQIELEWRTAS alt 1 [KALRRHVGILHVKVVKAVVQRKKVQMGMINPYVQIELSEDKISSKKTTVKHKNLNPEWNEEFKFSV RDPKTQVLEFNVYGWEK^IGKHDKMGMNVLALKELAPDERKAFTLELRKTLDGGEEGQPGKYRGKLE VELLYKPFTEEEMQAVQKAPEGTPVAGGMLVVIVHSAEDVEGKHHTNPYVHIYFKGEERKTKNVKKN KDPKWNEEFSFMLEEPPVHEKLHVEVFSTSSRIGLLHPK^ETLGYVDIPVVDVVNNKRMNQKFHLID SKNGKIQIELDWQTAF] alt 2 [KGKLEVELLYKSFTKEEMQAVQKAPEGTPAAGGMFVVIVHSAEDVEGKHHTNPYVHIYFKGEERKT KHVKKNKDPKWNEEFSFMLEEPPIHEKMHVKVFSTSSRIVFVLRC^ASVEAAYVPFEGIKPMLAHHD EGVLTCHVMVRESFEEINMAWRAWKLVRQGAGSSGSWFVRRRFVRELVRQEAVRQGAGLSGSRFVKE PVRQGAGSSGVGVWPLKSQGRPSDLRFFLKSTFSSFKFHDHYKIIK] - GCGCACACAAAGTTTGCTTGCCTTCTGGGCTTCACGATTCTCACGACATCTGTTTATCTTCTCCGATTTCCACG TCCATGGATCTCAGTCAATGTTCCTTAATCTCTCTTTTCGATTAGTCCAATCTCCACTAATCTCTGACCTCAGA TCGCTTCCGACGCCGCTGAACTGTGTCCGTCTTGATCTGTGTTTAGGAGAAAGCTTCTAGGGTTTTTGTTTTGG TTGCTGAGTAGAATTTGTTGGATCTGAAACGGAAATCAAAATGGGCTTTTTCAGTACGATACTAGGATTTTGTG *** GATTTGGAGTTGGGATTTCATTGGGACTTGTTATTGGTTACGTTCTCTTCGTCTACTTGCTCCCCAACGACGTC AAG phase 0 ac006234.4 (17133-16761 - GATCCTGAAATTCGTTCAATAGCTGACCAAGATCCCAAAGCTATGCTACGGATGCTTCCAGAGATACCTCTATG GGTCAAAAATCCGGATTTCGATCGT phase 0 ac006234.4 (16489-16391) - GTTGACTGGATAAACAGATTTCTCGAGTACATGTGGCCTTATCTCGACAAG phase 0 ac006234.4 (16297-16247) - GCCATATGTAAGACTGCAAAGAATATAGCAAAACCGATCATTGAGGAGCAGATACCAAAGTACAAGATTGACTCTGT TGAATTTGAAACACTTACTCTAGGCTCTTTACCCCCTACATTTCAAG phase +1 ac006234.4 (16151-16028) - GGATGAAAGTTTATCTCACGGATGAGAAAGAGTTGATTATGGAACCATGCTTGAAATGGGCCGCAAATCCCAATAT CTTGGTTGCCATCAAGGCATTTGGGTTGAAGGCAACAGTTCAG phase 0 ac006234.4 (15876-15758) - GTGGTCGATCTGCAAGTTTTTGCTCAGCCTCGTATCACTCTCAAGCCATTAGTTCCAAGTTTCCCTTGTTTTGCCAAT ATCTATGTGTCTCTTATGGAGAAG phase 0 ac006234.4 (15656-15555) - CCACATGTTGATTTTGGACTGAAGCTTGGTGGAGCAGATCTTATGTCAATCCCTGGCCTCTACAGATTTGTTCAG phase 0 ac006234.4 (15442-15368) - GAGCAAATCAAGGATCAAGTTGCGAACATGTATCTCTGGCCTAAGACCCTTGTAGTTCCAATCCTTGACCCTGC AAA phase +2 ac006234.4 (15056-14980) - [GGCGTTCAGAAGGCCTGTTGGAATTGTCCATGTGAAAGTTGTGAGGGCTGTGGGGCTGAGGAAAAAAGATCTGAT GGGCGGGGCAGATCCATTCGTGAAAATCAAGCTCTCTGAAGATAAGATTCCTTCTAAGAAGACAACAGTTAAACA CAAGAATTTGAATCCTGAATGGAATGAGGAGTTCAAATTCTCGGTCAGAGATCCCCAGACTCAGGTTCTAGAGTT CAGTGTGTATGACTGGGAACAG] phase 0 ac006234.4 (14892-14646) - [GTTGGGAATCCCGAGAAGATGGGTATGAATGTATTAGCTCTGAAAGAAATGGTGCCTGACGAACATAAAGC ATTCACCTTGGAACTGCGTAAGACTCTGGACGGCGGTGAAGATGGGCAGCCTCCTGACAAGTATAGGGGGA AGCTGGAGGTTGAACTCTTGTATAAGCCATTCACGGAGGAAGAAATGCCCAAAGGCTTTGAAGAAACGCAA GCCGTGCAGAAAGCTCCAGAAGGCACACCGGCTGCTGGAGGAATGCTTGTGGTAATAGTGCATTCGGCTGA GGATGTTGAAGGAAAGCACCATACCAATCCTTACGTGCGCATCTATTTCAAAGGAGAAGAGAGAAAAACAA AGCACGTGAAGAAGAACAGAGACCCAAGGTGGAATGAGGAGTTCACCTTTATGCTCGAGGAGCCTCCAGTC CGTGAGAAGCTGCACGTTGAAGTGCTGAGCACCTCTTCCAGGATAGGTCTATTGCATCCCAAG] phase 0 ac006234.4 (14573-14085) - [GAAACACTGGGGTATGTGGATATTCCAGTGGTGGACGTGGTGAACAACAAAAGGATGAATCAGAAGTTTCAC CTTATTGATTCTAAGAACGGAAAGATCCAAATCGAGCTCGAGTGGCGAACTGCCTCTTGATTTCTGAGTTGA *** TTCGAGAACAAACAAAGAGATAATTGGTTTGATGTTGTTAAAAACTATGTGTTGTTGTACAAAATGGGCTTT AACTCTTAAAAACCAACATTCAGATTTGCAGAGCCTTCTTTT] ac006234.4 (14000-13743) - alt 1 [AGCATTAAGAAGGCATGTTGGAATCCTCCATGTGAAAGTTGTGAAGGCTGTGGTTCAAAGGAAAAAAGTTCAGATG GGCATGATAAATCCATACGTGCAAATCGAGCTCTCTGAAGATAAAATTTCATCTAAGAAGACAACTGTTAAACACA AGAATTTGAACCCTGAATGGAATGAGGAATTCAAATTCTCGGTCAGAGATCCCAAGACTCAGGTTCTAGAATTCAA TGTGTATGGCTGGGAAAAG] phase 0 ac006234.4 (10827-10581) - alt 1 [ATTGGGAAGCACGATAAGATGGGTATGAATGTATTAGCTTTGAAAGAATTGGCGCCTGATGAACGTAAAGCATTCA CCTTGGAACTGCGTAAGACTCTGGACGGTGGTGAAGAAGGGCAGCCTGGCAAGTATAGGGGGAAGCTGGAGGTTGA ACTCTTGTATAAGCCATTCACGGAGGAAGAAATGCAAGCGGTTCAGAAAGCTCCAGAAGGCACACCGGTTGCTGGA GGAATGCTTGTGGTAATAGTGCATTCGGCTGAGGATGTTGAAGGAAAGCATCATACCAATCCTTATGTGCACATCT ACTTCAAAGGGGAGGAGAGAAAAACAAAGAATGTGAAGAAGAACAAAGACCCAAAGTGGAATGAGGAGTTCTCCTT TATGCTCGAGGAGCCTCCAGTCCATGAGAAATTGCACGTGGAAGTGTTTAGCACCTCTTCTAGGATAGGTCTATTG CATCCCAAG] phase 0 ac006234.4 (10504-10040) - alt 1 [GAAACACTAGGGTACGTGGATATTCCGGTGGTGGACGTGGTGAACAACAAAAGGATGAATCAGAAGTTTCACCTTA TTGATTCTAAGAATGGAAAGATCCAAATCGAGCTTGACTGGCAAACTGCCTTTTGA] *** ac006234.4 (9959-9828) - alt 2 GGGGAAGCTGGAAGTTGAACTCTTGTATAAGTCATTCACGAAGGAAGAAATGCAAGCGGTTCAGAAAGCTCCAGAA GGCACACCGGCTGCTGGAGGAATGTTTGTGGTAATAGTGCATTCGGCTGAGGATGTTGAAGGAAAGCACCATACCA ATCCTTACGTGCACATCTACTTCAAAGGGGAGGAGAGAAAAACAAAGCATGTAAAGAAGAACAAAGACCCAAAGTG GAATGAGGAGTTCTCCTTTATGCTGGAGGAGCCTCCAATCCATGAGAAAATGCACGTGAAAGTGTTTAGCACCTCT TCCAGGATAGTGTTTGTACTGAG phase +2 ac006234.4 (5590-5264) - alt 2 ATGCGCCTCGGTAGAGGCTGCCTACGTACCCTTTGAAGGGATCAAGCC phase +2 ac006234.4 (5156-5109) - alt 2 AATGTTGGCTCATCACGACGAGGGAGTCTTGACTTGTCACGTAATGGTGAGGGAGTCTTTCGAAGAGATTAACATG GCATGGAGAGCTTG phase +2 ac006234.4 (4831-4742) - GAAGCTGGTTCGTCAGGGAGCTGGTTCGTCAGGGAGCTGGTTCGTCAGGAGGCGGTTCGTCAGGGAGCTGGTTCGT CAGGAGGCGGTTCGTCAGGGAGCTGGTTTGTCAGGGAGCCGGTTCGTCAAGGAGCCGGTTCGTCAAGGAGCCGGTT CGTCAGGAGTCGGTGTGTGGCCTCTAAAATCTCAGGGTCGACCCTCTGATTTGAGATTTTTTCTTAAATCAACTTT CTCTAGCTTCAAGTTTCACGATCATTACAAAATAATAAAATAA *** ac006234.4 (4658-4388) -------------------------------------------------------------------------------- 87. Arabidopsis sytC AtsytC Abundance moderate Chromosome 5 Size >3 Kb Does not agree with gene prediction F21E1.140/At5g04220 http://www.arabidopsis.org MGFFTSVLGIIGFVIGIPIGLILGFFVLIYSQPSHQE^ YPPARPLVETSISVLLDLLPDIPLWMKNPDYER^ VDWFNKFISYMWPYLDKAVCGIIRSSVQPLFADYIGTFCIESIEFENLSLGTLPPTVH^ GVKFYETNEKELLFEPSIKWAGNPNIVLVLKVLSLRIRVQ^ LVDLQFFAIVRVALKPLLPTFPCFGMVVVSLMEK^ PHVDFGLKVLGGDLMSIPGLYRYVQ^ ETIKRQVSSMYHWPQVLEIPILDSS^ TASVKKPVGLLHVSILRARNLLKKDLLGTSDPYVKLSLTGEKLPAKKTTIKKRNLNPEWNEHFKLIVKDPN SQVLQLEVFDWDK^ VGGHDRLGMQMIPLQKINPGERKEFNLDLIKNSNVVMDSGDKKKRGRLEVDLRYVPFREESIKRRKESREE KSSEDDDFLSQAGLLSVAVQSAKDVEGKKKHSNPYAVVLFRGEKKKTK^ MLKKTRDPRWNEEFQFTLEEPPVKESIRVEVMSKGTGFHFRSK^ EELGHVDINLDDVVDNGRINQKYHLINSRNGIIHIEIRWTTS - AAAATCTCGTGATTTTTTTTTGTTTCTCTTATGCAAAAAAAAAAAAGAGTAACCAATCGGAAAAAACCTT TTAGTCACATAGAAAAAGATTTTGGCGGTTGGAAACAGAAGGGCTCTCTCTTCTTCGTTACCGTTTTGGA CCCGATTCCTTCTCCTTCGTGTTTCCTTATTACTGACTCTGACTCGTTCTTTCTTTTATTAATTCTCTTG CTTTTTTTTTCTTTAAAGATTTTCATCGGGAAAAACAAAACAAAAACATGGGTTTCTTCACCAGTGTGTT *** GGGGATCATCGGTTTTGTAATCGGAATCCCTATCGGACTCATCCTTGGTTTCTTCGTCTTGATTTATTCT CAGCCTTCACACCAAGAG phase 0 al391716.1 (62423-62057) - TATCCACCTGCGAGGCCACTAGTTGAGACTAGTATCAGTGTTCTTCTTGATCTTTTACCAGACATTCCAT TATGGATGAAGAATCCAGATTATGAAAGA phase 0 al391716.1 (61828-61730) - GTGGACTGGTTCAACAAATTTATCTCATACATGTGGCCTTACCTCGATAAGGCTGTTTGCGGGATCATCC GGAGTTCTGTACAACCTTTATTTGCAGATTATATTGGCACCTTCTGTATAGAATCCATTGAGTTCGAAAA TTTGAGTCTTGGAACGCTTCCACCTACAGTTCACG phase +1 al391716.1 (61633-61459) atypical gc donor - GTGTTAAGTTCTATGAGACCAATGAGAAGGAGCTTCTGTTTGAACCATCAATCAAATGGGCAGGCAATCC CAACATTGTTTTGGTGCTAAAGGTTCTGTCTTTACGAATTAGAGTTCAG phase 0 al391716.1 (61377-61259) - CTAGTAGATCTCCAGTTTTTTGCAATAGTGCGTGTAGCTTTGAAGCCTCTTCTGCCGACATTCCCTTGTT TCGGAATGGTTGTAGTTTCGTTAATGGAAAAG phase 0 al391716.1 (61180-61079) - CCACATGTTGATTTTGGATTGAAAGTGCTTGGTGGAGATCTCATGTCCATACCGGGGCTCTACAGATATG TTCAG phase 0 al391716.1 (60999-60925) - GAAACTATTAAAAGGCAAGTTTCAAGCATGTACCATTGGCCACAAGTGCTTGAGATACCTATTCTTGATT CTTCAAC phase +2 al391716.1 (60812-60736) - AGCGTCTGTAAAGAAGCCTGTTGGATTACTACATGTGAGCATTCTTCGAGCTCGTAATCTCCTCAAGAAG GATTTGTTGGGAACATCCGACCCTTATGTCAAGCTTAGCTTAACTGGAGAAAAGCTTCCAGCAAAGAAAA CCACCATAAAGAAGAGGAACTTAAACCCGGAATGGAACGAACACTTTAAGCTCATCGTCAAGGACCCAAA CTCACAAGTCCTTCAACTAGAAGTCTTTGACTGGGACAAG phase 0 al391716.1 (60644-60395) - GTCGGTGGGCACGACAGATTAGGAATGCAGATGATCCCTTTGCAAAAGATTAACCCGGGTGAGAGGAAGG AGTTTAATCTTGATCTGATTAAGAACTCAAATGTTGTTATGGATTCTGGAGACAAGAAAAAAAGAGGAAG ATTAGAGGTTGATCTCAGGTATGTGCCATTCAGAGAAGAAAGCATTAAGCGTAGAAAAGAGAGCAGAGAA GAGAAATCATCAGAGGACGATGATTTTCTCAGCCAAGCCGGTCTACTCTCGGTTGCAGTCCAATCTGCAA AAGATGTCGAGGGCAAGAAGAAACACTCGAACCCTTATGCTGTTGTTCTCTTCAGAGGAGAAAAGAAGAA AACTAAG phase 0 al391716.1 (60312-59956) - ATGCTGAAGAAAACACGAGACCCTCGATGGAACGAGGAATTCCAGTTTACACTAGAGGAGCCTCCAGTGA AAGAGAGTATACGCGTTGAGGTCATGAGTAAAGGAACCGGCTTTCACTTTCGATCCAAG phase 0 al391716.1 (59874-59746) - GAGGAACTAGGACATGTAGACATAAATCTGGACGATGTAGTTGACAATGGAAGGATCAACCAGAAATACC ATCTTATCAATTCCAGAAACGGCATTATTCACATTGAGATCCGTTGGACAACTAGTTAACAAAACTGATA *** ACAATTCTGGCATGAAGTTTTGTTCTAGTATGGCCTTTGTAAAATCTTGCATGTACTTGATCAAAATCAT ATAATTTTAATAAAATTTCGAAGTACATATTAAATGTTG al391716.1 (59660-59412) -------------------------------------------------------------------------------- 88. Oryza Diverged tandem duplicate of 89. No transcripts Chromosome 1 Size >4.6 Kb Does not agree with gene prediction P0454H12.27/OJ1529_G03.5 (http://www.ncbi.nlm.nih.gov) MGIVSMVLSFIGFCIGFSVGIVIGYFLFIYFQPTDVFQPTDVK^ NVKVRPLVEYDSDSLDDTLPEIPLWLKNPDYDR^ LDWLNRFLELMWPYLNK^ AICRIAQDVANPIIAKNKEKYKIDYIKFETFTLGSLPPTFQ^ GVKVQVTNEQELVMEPSLKWAGNPNTTVVVKAYGLKATIQ^ VVDMQVFVLPRITLKPLVSSFPCFANILVSLMEK^ PHVDFGLKLLGADVMAIPVLYKFVQ^ ETIMDQVASMFLWPKTLEVPIMDPS^ KASKKPVGILLVKVLRAQNLREKGPLGKRDPYVKLKMSGSKLPSKKTAVKHSNLNPEWNQEFKFVIRDPET QELDINVFDWEQ^ FGKDEKLGMCKISLKKLTPGTEVITDNLIKTMEPNGIQNEKSAGEITLELTYKPFKEGNIQKEDPGGLLYV VVHEAKELEGKCNTNPYVKLTFKGVEKKTK^ VVKENRNPRWKEEFEFECEETPANDKLHVEVLGTKKALIRNK^ ESLGHIDISLADVIINKRIIEMYDLINSKRGQIQIEFQWKSS - ATGGGCATAGTCAGCATGGTGCTTAGTTTCATTGGATTTTGCATTGGATTCTCAGTTGGTATTGTTATCGG *** TTACTTCCTCTTCATCTACTTCCAGCCAACCGATGTGAAG phase 0 ap003255.3 (159386-159276) ap003446.3 (29578-29468) - AATGTCAAAGTTCGCCCACTGGTGGAATATGACTCAGATTCTTTGGATGACACCCTTCCTGAAATTCCTT TGTGGCTCAAGAATCCTGACTATGATAGA phase 0 ap003255.3 (158860-158762) ap003446.3 (29052-28954) - CTTGATTGGCTGAACAGGTTTTTGGAGTTGATGTGGCCTTACCTCAACAAG phase 0 ap003255.3 (158649-158599) ap003446.3 (28841-28791) - GCTATCTGCAGAATTGCACAGGATGTTGCAAATCCAATCATTGCAAAGAACAAAGAGAAGTATAAAATAG ACTATATTAAGTTTGAAACATTTACTTTGGGTAGCTTACCACCAACCTTCCAAG phase +1 ap003255.3 (158535-158412) ap003446.3 (28727-28604) - GAGTGAAAGTCCAAGTTACAAATGAGCAGGAGTTGGTTATGGAACCCTCTCTTAAATGGGCAGGAAATCC CAATACCACTGTTGTTGTAAAGGCTTACGGGTTGAAAGCAACTATCCAG phase 0 ap003255.3 (157152-157034) ap003446.3 (27344-27226) - GTTGTGGATATGCAAGTCTTTGTTTTGCCTCGTATTACTCTAAAGCCTTTGGTGTCTTCATTTCCTTGCT TTGCAAATATCCTTGTTTCTCTCATGGAGAAG phase 0 ap003255.3 (156950-156849) ap003446.3 (27142-27041) - CCACATGTTGACTTTGGCCTAAAACTTCTTGGAGCAGATGTAATGGCTATTCCTGTTCTTTACAAATTTG TTCAG phase 0 ap003255.3 (156765-156691) ap003446.3 (26957-26883) - GAGACCATCATGGATCAAGTTGCTAGCATGTTTTTATGGCCAAAGACCCTTGAAGTGCCTATAATGGATC CCTCAAA phase +2 ap003255.3 (156532-156456) ap003446.3 (26724-26648) - GGCTTCTAAAAAGCCTGTTGGTATTCTATTAGTGAAAGTTTTAAGAGCTCAAAATCTTCGAGAGAAGGGT CCGTTGGGTAAACGAGATCCGTATGTGAAGCTCAAGATGTCAGGTAGCAAGCTTCCATCCAAGAAAACAG CAGTGAAGCACAGTAACCTTAATCCAGAGTGGAATCAAGAGTTCAAGTTTGTCATCAGAGACCCTGAAAC TCAGGAACTGGATATTAATGTCTTCGACTGGGAACAG phase 0 atypical gc donor ap003255.3 (156388-156142) ap003446.3 (26580-26334) - TTTGGAAAGGATGAAAAATTGGGCATGTGCAAGATTTCGCTGAAAAAACTTACCCCAGGGACTGAAGTTA TAACTGATAACTTGATTAAGACCATGGAACCGAATGGTATACAGAATGAGAAGTCTGCTGGTGAAATTAC TCTGGAGCTGACATATAAGCCTTTCAAGGAAGGCAATATACAGAAAGAAGATCCTGGAGGGCTGCTTTAT GTTGTTGTTCATGAAGCTAAAGAACTTGAAGGAAAATGTAACACGAATCCATATGTAAAACTAACTTTCA AAGGAGTAGAGAAGAAAACAAAG phase 0 ap003255.3 (156053-155751) ap003446.3 (26245-25943) - GTGGTCAAAGAGAACAGGAATCCACGATGGAAGGAAGAATTTGAGTTTGAGTGTGAGGAAACCCCTGCAA ATGATAAGCTACATGTTGAAGTCCTAGGTACCAAAAAAGCGTTGATACGCAATAAG phase 0 ap003255.3 (155636-155511) ap003446.3 (25828-25703) - GAAAGTTTAGGCCACATTGATATTAGCCTCGCAGATGTGATCATCAACAAACGGATCATTGAAATGTACG ATCTCATCAACTCAAAGCGTGGCCAGATTCAGATTGAGTTCCAGTGGAAATCTTCGTAG *** ap003255.3 (154862-154734) ap003446.3 (25054-24926) -------------------------------------------------------------------------------- 89. Oryza Diverged tandem duplicate of 88. Abundance low Chromosome 1 Size >5.7 Kb Does not agree with gene prediction OJ1529_G03.6 Transcript complexity affecting Nterm MGIVSMLIDFSGFCFGFSAGIVIGYFLFIYFQPTEVK^ DVKVCPLVEYDSNSLDGILHEIPLWVKNPDCDR^ IDWVSRFLEMMWPYLNK^ - alt.Nterm AICKTAQDIANPIIAENKEKYKIDSIEFETLTLGSLPPTFQ^ GMKAYVTEEQELIMEPSLKWAANPNVTVVVKAYGLKATIQ^ VVDLQVFASPRITLKPLVATIPCFAKILVSLMEK^ PHVDFGLKLLGADVMAIPILYSFVQ^ ETIKKQVASMYLWPKTLEVPIMDPS^ KASKRPVGILLVKVLRAQNLQKKDLLGKSDPYVKLTMSDDKLPSKKTTVKRGNLNPEWNEDFKFVVTDPET QELEIKVFDWEQ^ VGKHDKMGMNKILLKELPPEETKVTTYNLLKTMDPNDIHNEKSRGQITLEMTYKPFKEDDIEKDVQGTDVV GKAPDGTPAGGGLLYVVVHEAQDLEGKHHTNPYARIIFKGNEKKTK^ VIKKNRDPRWEEEIEFVCEDPPANDKLHVEVLSKPPKKWLIHGK^ ETLGYIDINLADVISNKRINETYHLIDSKTGQIQIELQWRTS - alt. start used instead of the next exon in ak107799 GATTGTCTGGAGTGCGACCTCGCGCTGTCGCGCATGGCGTAGTGGCGGCGTTCCTCCCTCCCTCTCGTCT CGACTTGCCGCCGCGTCGGCGCCCCGTGCATATGGCCCGCCGTCGCTGGCCCTCGCTCGCTGAGAGCGCC ATCCGCCGACGGCGTACGGACCACCCTCTCCTCGCCGGCGCCTTTCTTTTCCCCGCCGCATCCCCGGTTT CGGTTTCCCGTCGGCAAGAGATGAATCCCACGGACACCACGCCATCGGCGGCCGATTCGAGACGGAG phase 0 ap003446.3 (36376-36100) - ATGGGCATAGTCAGCATGTTGATTGATTTCTCTGGGTTTTGTTTTGGATTCTCAGCTGGTATTGTTATTG *** GGTACTTCCTCTTCATCTACTTCCAGCCAACCGAGGTGAAG phase 0 ap003446.3 (35225-35115) - GACGTCAAAGTTTGCCCACTGGTGGAATATGACTCAAATTCTTTGGATGGCATCCTTCATGAAATTCCTT TGTGGGTCAAGAATCCTGACTGTGATAGA phase 0 ap003446.3 (34605-34507) - ATTGATTGGGTGAGCAGATTTCTGGAGATGATGTGGCCTTACCTCAACAAG *** phase 0 ap003446.3 (34390-34340) - GCTATCTGCAAAACTGCACAGGATATTGCAAATCCAATTATTGCAGAGAATAAAGAAAAATATAAAATAG ATTCTATTGAGTTTGAAACACTTACTCTGGGTAGTTTACCACCAACCTTTCAAG phase +1 ap003446.3 (34239-34116) - GAATGAAAGCATATGTTACAGAAGAGCAGGAGTTGATAATGGAGCCATCTCTTAAGTGGGCAGCAAATCC GAATGTCACTGTTGTCGTAAAGGCTTATGGATTGAAAGCAACTATCCAG phase 0 ap003446.3 (33484-33366) - GTTGTGGATCTACAAGTCTTTGCTTCACCTCGTATTACTCTAAAACCTTTGGTGGCTACAATCCCGTGCT TTGCAAAAATCCTTGTATCTCTCATGGAGAAG phase 0 ap003446.3 (33264-33163) - CCACATGTCGATTTTGGGCTAAAACTTCTTGGAGCAGATGTAATGGCTATTCCTATTCTTTACAGTTTTG TTCAG phase 0 ap003446.3 (33079-33005) - GAGACCATCAAGAAGCAAGTTGCGAGCATGTATTTGTGGCCAAAGACACTTGAAGTGCCTATAATGGATC CCTCGAA phase +2 ap003446.3 (32148-32072) - AGCTTCTAAAAGGCCTGTCGGTATTCTACTTGTGAAAGTTTTAAGAGCTCAAAATCTGCAAAAGAAGGAT CTGCTGGGTAAATCAGACCCATATGTGAAACTTACAATGTCAGATGACAAGCTTCCATCCAAGAAAACAA CAGTGAAGCGCGGTAATCTTAATCCAGAGTGGAACGAAGATTTCAAATTTGTTGTGACAGATCCTGAAAC TCAAGAACTGGAAATTAAAGTCTTCGACTGGGAACAG phase 0 ap003446.3 (31983-31737) atypical gc donor - GTTGGAAAGCACGACAAGATGGGCATGAACAAGATTCTGTTGAAAGAACTTCCCCCAGAGGAAACTAAAG TTACAACCTATAACTTGCTTAAGACCATGGATCCAAATGACATACATAATGAGAAGTCTCGTGGTCAAAT TACTCTGGAGATGACATATAAACCTTTCAAGGAAGACGATATAGAGAAAGATGTCCAAGGTACAGACGTA GTAGGGAAAGCTCCTGATGGTACTCCAGCTGGTGGTGGGCTGCTTTATGTTGTTGTTCATGAAGCTCAAG ATCTTGAAGGCAAGCATCACACTAACCCATATGCAAGAATAATTTTCAAAGGAAACGAGAAGAAAACGAAG phase 0 ap003446.3 (31654-31304) - GTGATCAAGAAAAACAGGGATCCGCGATGGGAGGAGGAGATTGAGTTTGTTTGTGAGGATCCCCCTGCAA ATGACAAACTACATGTTGAAGTCCTAAGTAAACCCCCCAAAAAATGGTTGATACATGGCAAG phase 0 ap003446.3 (31202-31071) - GAAACTTTAGGCTACATTGATATAAACCTCGCAGACGTGATCAGTAATAAGCGGATTAATGAAACGTACC ATCTCATCGACTCAAAAACCGGTCAGATTCAAATCGAGTTGCAGTGGAGAACTTCATAG *** ap003446.3 (30830-30702) -------------------------------------------------------------------------------- 90. Oryza Abundance moderate Chromosome 9 Size >9.6 Kb Transcript complexity affecting 5'UTS MGVISTVLGFSGFGFGFSAGIVIGYYFFIYFQPTDVK^ DVKVRPLVEYDSISLDGILPEIPLWVKNPDYDR^ IDWLNRFLEMMWPYLNK^ AICRTALDIAKPIIEENRKTYKLESIEFESLTLGSLPPTFQ^ GMKVYVTEEQELIMEPSLKWAANPNVTVVVKAYGLKATVQ^ IVDLQVFASPRITLKPLVPTFPCFAKILVSLMEK^ PHVDFGLKLFGADLMAIPGLYRFVQ^ ETIKKQVASMYLWPKTLEVPIMDPS^ KASKKPVGILLVKVLRAQNLRKKDLLGKSDPYVKLKMSDDKLPSKKTTVKRSNLNPEWNEDFKFVVTDPET QALEINVFDWEQ^ VGKHEKMGMNNILLKELPADETKVMTVNLLKTMDPNDVQNEKSRGQLTLEVTYKPFKEEDMEKEGIDNADV VEKAPDGTPAGGGLLYIVVHEAQDLEGKHHTNPYAKIIFKGEEKKTK^ VIKKNRDPRWEDEFEFVCEEPPVNDKLHIEVLSKASKKGLIHGK^ ETLGYIDISLADVISNKRINEKYHLIDSKNGQIQIEMQWRTS - start1 ak068006 ACTTTTCTCAGCACGTAGTGGTCGGCCGAGAGCCTCGTCGAAGAGGGCGCTGCCGCCATCCCGTTCCCGG CGACCGCCGCCGCCGCAGGCCAGTAGTCGTTGAGCAGCATCTTGATGCCGTCCACCAGTTGCATTGCACC CACGAGCGGCGCCTGCTGCTGCACGGCTATCAGCTCGGCGTCGCTGAACACCTTGCGGCAAGCGGCCGTT GACCTCGACGCCGCCACCGCCGCCGCCGCCGCCGCACGTGCTCTCTCTGCAGTCTGCGCTGCGTCAGCTC TCGCCGCGCGTCGGCTCTCCGGCATCGACCCTGCCAAATCCTTCCTTCTGCTCGCTCCCCAAG ap006149.2 (13632-13290) - start2 ak065681 ACACACCTTGGATCGCGGCCTCACGCGCGTGAGGCGCCGCAACGCAACGTGCGACCCCGACCTCTCCTCC TCCACCTCGGCTTCCCCCCAAATTCCATCTCCTCGCCTCGGCGAATCCGATTCCGAGCACTCACAACCGG ATCGGAGCGAGTTCCATGGCCTGAATCTCAGGGGGGGTGACTGGCCGAGGAGCGGGCTCTCTCTCTCACTG ap006149.2 (9689-9479) - start3 ak068206 TTGCTCTGAATTTTGCTTATGCCGGGATATTTTGATGCTCTCACGCAAAAAGCTGAATAGAGTATTTTCA CCAAAAAAAAAAAAGAGGAG ap006149.2 (8311-8224) - CCTTAGGCTGAAATCTGCTATAACTTTGGAGGTACTAAAACGAGTCTGAGATGGGTGTGATTAGTACGGT *** GCTTGGTTTCTCTGGGTTTGGCTTTGGATTCTCCGCTGGTATTGTCATCGGATACTACTTCTTCATCTAC TTCCAGCCAACTGATGTCAAG phase 0 ap006149.2 (8088-7928) - GACGTCAAAGTTCGCCCACTTGTCGAATATGACTCAATATCGTTGGACGGTATCCTTCCTGAAATTCCTTT GTGGGTCAAGAATCCTGACTATGATAGA phase 0 ap006149.2 (7434-7336) - ATTGATTGGCTGAATAGATTTTTGGAGATGATGTGGCCTTACCTCAACAAG phase 0 ap006149.2 (7220-7170) - GCGATCTGCAGAACTGCACTGGATATTGCAAAGCCAATCATTGAAGAGAACAGGAAGACGTATAAACTAG AATCTATTGAGTTTGAATCACTTACATTGGGTAGCTTACCACCCACCTTTCAAG phase +1 ap006149.2 (7073-6950) - GAATGAAAGTGTATGTCACAGAAGAACAAGAATTGATAATGGAACCATCTCTTAAGTGGGCTGCAAATCC CAATGTCACTGTTGTTGTAAAGGCTTATGGGTTGAAAGCAACTGTCCAG phase 0 ap006149.2 (6536-6418) - ATTGTGGATCTGCAAGTCTTTGCTTCACCTCGTATTACTCTGAAGCCATTGGTCCCTACATTTCCTT[GCT] TCGCAAAAATCCTTGTTTCTCTCATGGAGAAG phase 0 ap006149.2 (6308-6207) but (6241-6239) removed in ak068206 - CCACACGTTGACTTCGGGCTGAAACTTTTCGGAGCAGATTTAATGGCTATCCCTGGTCTTTACAGATTTG TTCAG phase 0 ap006149.2 (6134-6060) - GAGACCATAAAAAAGCAAGTTGCGAGCATGTATTTGTGGCCAAAGACATTGGAAGTTCCCATAATGGATC CCTCAAA phase +2 ap006149.2 (5654-5578) - AGCTTCTAAGAAGCCTGTTGGAATTCTACTTGTGAAAGTTTTAAGAGCTCAAAACCTGCGAAAGAAGGAT CTGTTGGGTAAATCGGACCCATATGTGAAACTTAAGATGTCAGATGACAAGCTTCCGTCCAAGAAAACAA CAGTGAAGCGTAGCAATCTCAATCCAGAGTGGAATGAGGATTTCAAATTTGTTGTGACAGACCCTGAAAC TCAGGCACTGGAAATTAATGTCTTTGATTGGGAACAG phase 0 ap006149.2 (5496-5250) - GTTGGCAAGCATGAGAAAATGGGCATGAACAACATTCTGTTGAAAGAACTTCCCGCAGATGAGACTAAAG TCATGACTGTTAACTTGCTTAAGACGATGGATCCTAATGATGTACAAAATGAGAAGTCCCGTGGTCAGCT TACTCTGGAGGTGACATATAAGCCTTTCAAGGAAGAGGATATGGAGAAAGAAGGCATCGATAATGCTGAT GTGGTGGAGAAAGCTCCTGATGGTACTCCAGCTGGTGGAGGACTGCTTTATGTTGTTGTTCATGAAGCTC AAGATCTTGAAGGAAAGCATCACACAAACCCATATGCAAAGATAATTTTCAAAGGAGAAGAGAAGAAAAC AAAG phase 0 ap006149.2 (5160-4807) - GTAATCAAGAAAAACAGGGATCCACGGTGGGAGGACGAATTCGAGTTTGTATGCGAGGAACCCCCTGTAA ATGATAAACTGCATATTGAAGTTCTAAGTAAAGCTTCAAAGAAAGGATTGATACACGGCAAG phase 0 ap006149.2 (4690-4559) - GAAACCTTAGGCTACATTGATATAAGCCTCGCAGATGTGATCAGCAACAAGCGGATCAATGAGAAGTACC ACCTCATTGATTCCAAAAATGGTCAGATTCAGATAGAGATGCAGTGGAGAACTTCATAGCAACCGTGATG *** AAGTAGGTGAAATGCTTGAACTTCGTGAGATACAGGATGATACATATGAATGTTGTTGCTACAAACAGAG TTTGGCCAATACCTGTGATTGAGTTCTGTAGATATTTACTTCTTTGTGTCCAGGCATCTGTTTTACCTTG TTGAGATATTTTGTTATTTTTTCAAAATTGTGTTGAGAACAACGTAGAAGCAACCATGCTATTGGCATCG GAAGTGGAATTAGATGTGAGATGTAATGACCCATTATCCTTCAATGCAGATAAACATAGAATTCTGGCAG AGTTGAATTCTTTTAAAAAGAAGTTGTGCGTTCGACAAAA ap006149.2 (4453-3994) -------------------------------------------------------------------------------- 91. Oryza sytB OssytB Abundance moderate Chromosome 2 Size >7.7 Kb MGFFRTVLGFFGFGVGVTMGLVIGYYLFIYFQPTDVK^ DPVIRPLVELDTKSLESMLPEVPHWVKNPDFDR^ IDWLNKFVENIWPYLDK^ AICKTAKEIAKPIIAENTAKYKIDSVEFETLTLGSLPPTFQ^ GMKVYTTDEQELIMEPSIKWAGNPNITVVVKAFGLKATAQ^ VIDLHVFALPRITLKPLVPSFPCFAKIVVSLMEK^ PHVDFGLKLLGADLMAIPGLYVFVQ^ EIIKTQVANMYLWPKVLEVPIMDPA^ KAQKKPVGILHVNIVRAVKLTKKDFLGKSDPYVKLKLTEEKLPSKKTSVKRSNLNPEWNEDFKLVV KDPESQALELTVYDWEQ^ VGKHDKIGMSVIPLKELIPDEAKSLTLDLHKTMDANDPANDKFRGQLTVDVTYKPFKEGDSDVDTS DESGTIEKAPDGTPEGGGLLVVIVHEAQDVEGKHHTNPYVRIVFRGEERKTK^ HIKKNRDPRWEQEFQFVCEEPPINDKMQIEVISRPPSIGIHSK^ ENLGYVVISLADVINNKRINEKYHLIDSKNGRIQLELQWRTS - GCTGTTACTGTGCGCGCTGCAACGCATCCTCTCCTCTCCTAGATCCCATCCGCATCTTCTTCCTCGTTTG ACATTGCCCCTGTTGCTTGCTTCACGTCTCCTCTTCATGTGATCTGAGGCGCTCGCTTTCGGATTCTTGC TCTTCTCGGCGGCTCGCGTTGGGGGAGCGGTGGTGGGGAGGAGATGGGGTTTTTCCGCACTGTGCTGGGT *** TTCTTCGGGTTTGGGGTGGGAGTTACCATGGGGCTTGTGATTGGGTACTACCTCTTCATCTACTTCCAGC CCACCGACGTCAAG phase 0 ap004855.1 104008-104301 - GACCCTGTAATCAGGCCACTTGTTGAACTTGATACAAAATCTCTAGAAAGCATGCTTCCTGAGGTTCCTC ATTGGGTGAAGAATCCAGACTTTGACCGG phase 0 ap004855.1 105372-105470 - ATTGATTGGCTTAACAAGTTTGTCGAAAACATTTGGCCTTATCTTGACAAG phase 0 ap004855.1 105585-105635 - GCAATATGTAAAACTGCAAAGGAAATCGCTAAGCCAATTATTGCTGAGAACACTGCCAAGTATAAGATTG ATTCGGTTGAATTTGAGACATTAACATTAGGTTCATTACCACCAACATTTCAAG phase +1 ap004855.1 105715-105838 - GGATGAAGGTCTACACCACAGATGAGCAAGAACTTATAATGGAACCTTCCATCAAGTGGGCTGGAAATCC GAATATCACTGTTGTTGTCAAAGCATTTGGGCTAAAAGCAACTGCACAG phase 0 ap004855.1 108179-108297 - GTTATTGATTTGCATGTTTTTGCTCTACCACGCATAACGTTGAAGCCCTTGGTGCCTAGCTTTCCTTGTT TTGCTAAAATAGTTGTTTCACTTATGGAGAAG phase 0 ap004855.1 108441-108542 - CCACATGTTGATTTTGGTCTGAAACTCTTAGGAGCAGATCTCATGGCAATTCCAGGTCTCTATGTATTTG TTCAG phase 0 ap004855.1 - GAGATTATCAAGACTCAGGTAGCAAACATGTACTTGTGGCCAAAAGTACTTGAGGTGCCAATCATGGATC CAGCAAA phase +2 ap004855.1 109032-109108 - AGCACAAAAGAAGCCTGTTGGAATTTTGCATGTTAACATCGTACGGGCTGTCAAACTCACCAAAAAGGAT TTTCTGGGAAAATCGGATCCATATGTGAAGTTAAAGCTAACAGAGGAAAAACTCCCATCAAAGAAAACGT CAGTGAAGCGAAGCAACTTGAACCCTGAATGGAATGAAGATTTCAAATTAGTTGTCAAAGACCCAGAATC TCAGGCTCTTGAGCTTACTGTTTACGATTGGGAGCAG phase 0 ap004855.1 109200-109446 - GTTGGGAAGCACGACAAGATTGGAATGAGTGTTATCCCATTGAAAGAGCTTATTCCTGATGAGGCAAAGT CACTTACACTTGACTTACACAAGACTATGGATGCTAATGACCCAGCAAATGACAAGTTCCGGGGGCAGCT CACTGTTGATGTAACATATAAGCCTTTCAAGGAAGGTGATTCTGATGTTGATACAAGTGATGAATCTGGC ACCATTGAAAAAGCCCCTGATGGCACACCGGAAGGTGGTGGTTTGCTGGTAGTTATCGTTCATGAAGCAC AAGACGTTGAAGGAAAGCACCACACTAATCCATATGTAAGAATTGTGTTTAGAGGTGAAGAAAGGAAGAC CAAG phase 0 ap004855.1 109527-109880 - CATATTAAGAAGAATCGTGATCCACGTTGGGAGCAAGAATTTCAGTTTGTCTGCGAGGAACCACCCATAA ATGATAAAATGCAAATTGAAGTCATTAGCAGACCACCAAGCATCGGTATACATTCCAAG phase 0 ap004855.1 110016-110144 - GAAAATCTTGGCTATGTTGTCATAAGTCTTGCAGATGTTATAAACAATAAGAGGATCAATGAGAAATATC ATCTAATTGACTCGAAAAATGGCCGCATCCAGTTGGAATTGCAGTGGAGAACATCTTAGAACTCACGGGC *** TGAAATCTTGTAAAGTTTCTTGTTTAGAATGCTTTCTACACTTGTATGTATCATTTGGCAGACATATCTT ACCTTCTGAATTATTCCACTTTTAAAACTATGCTTTTCATTGTTTCCCCCAGATTCTCACTGGTTGGTAT ATATGATTATGAACAGAAACCAGGAAGCCTGAACTAATTATGGAATTGGTATTCTGTATGAGAATCGATG AATTTGTGTTA ap004855.1 111459-111819 -------------------------------------------------------------------------------- 92. Oryza sytC OssytC Abundance moderate Chromosome 6 Size >5.9 Kb Transcript complexity affecting Nterm and Cterm MGLVGGLLGFGVGLPLGIAVAYLVYLRLFAPRRRLQ^ DPIIRPLRDLDSETLQTTIPDIPLWVKCPDYER^ VDWINKFIFDMWPFLDK^ AICNTIRSVIRPTFDQYVGQYGIKSIEFGHLTLGALPPTFQ^ GIKVYEMREKELVIEPVIRWASIANVIVKVKVHSFQVSAQ^ LLDLHIMLTPRVTLKPLVPSFPCFANLCVSLMEK^ PHIDFGFKLLGGDVMAIPGLHRFVR^ EKISKQIANLYHWPKLIQIPILDEA^ SGATKKPVGILHVKVIRAMNLLKMDLLGKSDPYVKLRLSGEKLPSKKTS IKMSNLNPEWNEHFRFIVKDPETQILELRMFDWEK[V-end VKMHDKLGMQVVPLRLLTPYESKLFTLDLLKSMDPNDPHNKKNRGKLVVELTFDPFRDDSNSTILM - alt.Nterm SDGEGNVSVKRDVPPSGGLLLVSVENAEDVEGKRHTNPYAVVHFRGERKETK^ IIKKTRDPRWNEEFQFMVDEAPVDDKIHIEVVSKRRGLRLPFRNK^ ESLGHVDINLVDVVNNGRINEKYHLINSRNGMVHVEMKWSTV - CTTTTGGCGCGTTGCTGGCTCCCGCTCACGCCTCGTCTCGCTCGACGTCTCCGAGGAGGCGAGGAGCTCG AGCTCGCCGCCTCGCCGGCCGGCCATTACTTTATCCGCGGCGGGTAGCTGGGGAGGGAGGGGAGGCGGCC GGCCACCAACCCATCGTCGTCTTGTGGTTTCCCATGCGGTTGCCGCCGCGGGCGCCGCTGCATTCGCGGG AGCGGGCGGGAACGGGATGGGGCTCGTCGGTGGCCTCCTCGGCTTCGGCGTCGGCCTCCCCCTCGGCATC *** GCCGTCGCCTACCTCGTCTACCTCCGCTTGTTCGCCCCTCGCCGCCGTCTCCAG phase 0 ap004277.1 73390-73723 - GATCCTATTATTAGACCACTACGCGACTTGGATTCTGAGACATTACAGACAACTATACCAGATATTCCGT TGTGGGTGAAGTGTCCAGATTATGAACGG phase 0 ap004277.1 75093-75191 - GTTGACTGGATTAACAAGTTTATTTTTGATATGTGGCCCTTCCTTGATAAG phase 0 ap004277.1 75895-75945 - GCAATCTGCAACACAATAAGAAGTGTAATCAGACCAACATTTGATCAATATGTTGGACAATATGGAATAA AATCAATTGAATTTGGGCACTTAACACTTGGGGCTCTTCCTCCTACGTTCCAAG phase +1 ap004277.1 76101-76224 - GAATTAAAGTTTATGAAATGAGAGAAAAAGAGTTGGTAATTGAACCTGTGATTCGGTGGGCCAGCATAGC AAATGTAATTGTGAAAGTGAAGGTGCATTCTTTCCAAGTGTCGGCTCAG phase 0 ap004277.1 76472-76590 - CTTTTAGATTTACATATAATGCTGACACCACGTGTGACTCTGAAGCCTCTTGTGCCAAGCTTTCCCTGCT TTGCAAACTTGTGTGTTTCACTGATGGAGAAG phase 0 ap004277.1 76661-76762 - CCACATATCGACTTTGGATTCAAATTGTTGGGTGGAGATGTCATGGCAATACCTGGCTTGCATCGGTTTG TCCGG phase 0 ap004277.1 76831-76905 - GAGAAAATATCAAAGCAAATCGCAAACTTGTATCACTGGCCTAAGCTTATACAAATTCCTATTTTAGATG AAGCGAG phase +2 ap004277.1 77097-77173 - TGGTGCGACAAAGAAACCAGTTGGAATATTACATGTAAAGGTAATTCGAGCCATGAATCTTCTCAAGATG GACTTGCTTGGAAAATCTGATCCCTATGTCAAGCTCCGTTTGAGTGGTGAGAAACTGCCTTCAAAGAAGA CGTCTATTAAGATGAGCAACCTGAATCCTGAGTGGAATGAACACTTCAGATTTATAGTCAAGGATCCTGA AACACAAATCCTTGAGCTCCGCATGTTTGATTGGGAAAAG[GTTTAGCTTTGCT *** phase 0 ap004277.1 77627-77876/77889 second pickup introduces translation stop, c26570 - GTTAAAATGCATGATAAACTGGGTATGCAAGTAGTTCCCCTCCGCTTGCTTACTCCTTATGAGAGTAAAC *** TGTTCACACTTGACCTTCTGAAAAGCATGGACCCAAATGATCCTCATAACAAGAAGAACAGAGGAAAGCT TGTCGTAGAGCTGACATTTGATCCCTTCAGAGATGACAGCAACAGTACCATTCTGATGTCAGATGGTGAA GGCAATGTCAGTGTAAAAAGGGACGTCCCACCTAGTGGAGGGTTGCTGTTGGTTTCAGTAGAAAATGCAG AAGACGTCGAGGGAAAGCGTCATACTAATCCGTATGCCGTGGTTCATTTTAGGGGAGAAAGGAAGGAAAC GAAG phase 0 ap004277.1 78018-78371 - ATAATCAAGAAAACAAGAGATCCAAGATGGAACGAAGAGTTTCAGTTCATGGTTGATGAGGCTCCTGTGG ATGATAAGATCCACATCGAAGTAGTAAGCAAACGCCGTGGGCTCCGGCTTCCCTTCCGCAATAAG phase 0 ap004277.1 78514-78648 - GAATCATTGGGGCATGTGGATATAAACCTAGTGGACGTCGTGAACAACGGACGGATCAACGAAAAATACC ATCTGATCAACTCGAGGAACGGGATGGTACACGTCGAGATGAAATGGAGCACTGTATGACAATGATTCGG *** TATTCTGAAGAGTCTCACCTGTATGATTATACCTGTCGCTGTACATATACAGTCGCCATACTCCGTGTGG GCCATGTATGTTGTAACTTTAGCCCTAATCCTCTACTCTCTCGCTCTTTTCGTGATCCATTTTGGGCGCT TTTTAGCGTGCTGTAACGTCAATGATAGTGGCGTGATCACTTGCTTGTAAAGTCACGCGGCAATGCGTTC GTTGATCTCTCTTTCAGTGTTTTTATCATTCTTTTTGGCTGCCTGTATGGCACCCATCAATGTTGTGTCG TTCGATCACGCCTGAAAGTGGCTCATTTATTGAATATATATTACTCT ap004277.1 78804-79270 -------------------------------------------------------------------------------- 93. Arabidopsis sytD AtsytD chromosome 5 agrees with gene prediction T5K6_80 http://www.mips.biochem.mpg.de/proj/thal/ agrees with gene prediction nm_121148 http://www.ncbi.nlm.nih.gov no evidence of expression MGFLFGLFIGIAVSFGLVVAFARYSSVRSTRRADL^ AKTIAAFARMTVQDSRKLLPGDFYPSWVVFSQRQKLSYSKCL^ LNWLNLELEKIWPYVNE^ AASELIKSSVEPVLEQYTPAMLASLKFSKFTLGTVAPQFT^ GVSILESESGPNGITMELEMQWDGNPKIVLDVKTLLGVSLPIE^ VKNIGFTGVFRLIFKPLVDEFPCFGALSYSLREK^ KGLDFTLKVIGGELTSIPGISDAIEETIRDAIE^ DSITWPVRKIIPILPGDY^ SDLELKPVGKLDVKVVQAKDLANKDMIGKSDPYAIVFIRPLPDRTKKTKTI^ SNSLNPIWNEHFEFIVEDVSTQHLTVRVFDDEGVGSSQLIGAAQVPLNELVPGKVKDIWL KLVKDLEIQRDTKNRGQ^ LELLYCPLGKEGGLKNPFNPDYSLTILEKVLKPESEDSDATDMKKLVTSKKKDVIVRGVL SVTVVAAEDLPAVDFMGKADAFVVITLKKSETKSKTRVVPDSLNPVWNQTFDFVVEDALH DLLTLEVWDHDKFGKDKIGRVIMTLTRVMLEGEFQEWFELDGAKSGKLCVHLKWTPRLKL RDAS - ATGGGTTTTCTCTTTGGTTTGTTCATAGGAATCGCGGTTTCTTTCGGTTTGGTCGTCG *** CATTTGCTCGCTACTCTAGTGTCAGATCCACTCGTCGAGCTGATTTG phase 0 al391222.1 83542-83646 - GCAAAGACCATTGCTGCATTTGCAAGAATGACAGTTCAAGATTCGAGAAAACTTCTCC CGGGAGATTTTTATCCTTCTTGGGTTGTGTTTTCTCAGAGACAAAAGTTGAGTTATTC TAAATGTCTT phase 0 al391222.1 83734-83859 - TTAAATTGGCTTAATCTTGAACTTGAAAAGATCTGGCCTTATGTAAATGAG phase 0 al391222.1 83931-83981 - GCAGCTTCTGAGCTGATTAAAAGCAGTGTGGAACCAGTACTTGAACAGTATACACCAG CTATGTTAGCATCTCTCAAGTTCTCTAAATTCACACTTGGGACTGTGGCTCCTCAGTT CACAG phase +1 al391222.1 84082-84202 - GAGTTTCTATCTTAGAAAGTGAAAGTGGACCTAATGGAATCACAATGGAACTTGAAAT GCAATGGGATGGTAATCCAAAAATCGTGTTGGATGTCAAAACCTTACTTGGCGTGTCT CTACCTATTGAG phase 0 al391222.1 84510-84637 - GTCAAAAACATAGGATTCACAGGTGTTTTCAGGCTGATTTTCAAACCTCTTGTTGATG AATTCCCTTGCTTTGGGGCACTTTCTTATTCACTCCGCGAGAAG phase 0 al391222.1 84717-84818 - AAAGGGCTTGATTTTACCCTCAAAGTTATAGGTGGTGAATTAACATCAATTCCAGGGAT TTCAGATGCAATCGAA phase 0 al391222.1 84893-84967 - GAAACTATTCGTGACGCCATTGAAGACAGTATAACATGGCCAGTTAGGAAAATTATACC TATTTTACCAGGAGATTACAG phase +2 al391222.1 85057-85136 - TGATCTGGAGTTGAAACCTGTTGGAAAATTGGATGTGAAGGTTGTGCAAGCAAAGGACTT AGCTAACAAAGACATGATTGGAAAATCTGATCCTTACGCTATTGTATTCATTCGCCCTTT GCCTGACAGAACCAAAAAGACCAAAACTATT phase 0 al391222.1 85212-85362 - AGTAACTCGTTGAATCCGATTTGGAATGAACATTTTGAGTTCATTGTGGAAGATGTCTCA ACTCAACATTTGACAGTAAGAGTCTTTGACGACGAAGGAGTTGGATCTTCTCAGCTTATT GGGGCTGCTCAAGTACCGTTAAATGAACTCGTACCCGGGAAAGTTAAAGATATTTGGTTG AAGTTAGTCAAGGATTTAGAGATCCAAAGGGATACAAAAAATAGGGGTCAG phase 0 al391222.1 85457-85687 - TTGGAGCTCTTATATTGTCCCTTAGGCAAAGAAGGCGGATTGAAGAACCCGTTTAACCCG GACTACTCATTGACCATTTTAGAGAAGGTACTGAAGCCGGAAAGCGAGGATTCGGATGCC ACGGATATGAAAAAACTGGTGACCTCGAAGAAAAAAGATGTGATAGTGAGAGGAGTGTTG TCTGTGACAGTGGTGGCAGCTGAAGACTTACCAGCTGTAGATTTTATGGGAAAAGCAGAT GCATTTGTGGTAATCACATTGAAGAAATCAGAAACGAAATCCAAGACAAGGGTAGTACCG GATAGCTTGAATCCGGTTTGGAACCAGACGTTTGATTTTGTAGTGGAAGATGCTTTGCAT GATCTATTGACGCTTGAAGTATGGGACCATGACAAATTTGGCAAGGACAAGATAGGGAGA GTGATAATGACATTGACGCGAGTGATGTTAGAAGGAGAGTTTCAAGAGTGGTTTGAGTTA GATGGAGCTAAATCAGGGAAGCTTTGTGTCCATCTTAAATGGACTCCTAGGCTTAAGCTC AGAGACGCCTCTTGA *** al391222.1 85807-86361 -------------------------------------------------------------------------------- 94. Arabidopsis sytE AtsytE chromosome 1 does not agree with gene prediction T25N20.15 http://www.mips.biochem.mpg.de/proj/thal/ cDNA/est evidence MGFIVGVVIGLLVGIAIIIGFVKLENSRSKLRSEL^ ANTVAAFARMTVEDSRKLLPPEFYPSWVVFSERQK^ RNA editing? LTWLNHHLTKIWPYVDE^ AASELIKASVEPVLEQYRPAIVASLTFSKLTLGTVAPQFT^ GVSVIDGDKNGITLELDMQWDGNPNIVLGVKTLVGVSLPIQ^ VKNIGFTGVFRLIFRPLVEDFPCFGAVSVSLREK^ KKLDFTLKVVGGDISAIPGLSEAIE^ ETIRDAVEDSITWPVRKVIPIIPGDY^ SDLELKPVGMLEVKLVQAKNLTNKDLVGKSDPFAKMFIRPLREKTKRSKTI^ NNDLNPIWNEHFEFVVEDASTQHLVVRIYDDEGVQASELIGCAQIRLCELEPGKVKDVWL KLVKDLEIQRDTKNRGE^ VHLELLYIPYGSGNGIVNPFVTSSMTSLERVLKNDTTDEENASSRKRKDVIVRGVLSVTV ISAEEIPIQDLMGKADPYVVLSMKKSGAKSKTR^ VVNDSLNPVWNQTFDFVVEDGLHDMLVLEVWDHDTFGK^ DYIGRCILTLTRVIMEEEYKDWYPLDESKTGKLQLHLKWMAQSIYRDS - AGAAAAGAAATAAATTACTTCTCTTTTATTTTTCATTCGGTTTAGCTCGTGGAACTGAAT CTGGTGTGTTTGTTGATCAGAGTAATACGGACATTGCAATTTTTCTAAATCCGGCGATTA AATATGGGTTTCATAGTCGGCGTTGTAATCGGACTCCTCGTCGGAATCGCAATCATCATC *** GGCTTTGTCAAGTTGGAGAATTCTCGATCCAAGCTTCGCTCTGAACTT phase 0 ac005106.2 57048-57227 - GCGAATACGGTGGCTGCTTTTGCGAGGATGACGGTGGAGGATTCCAGGAAGCTTTTGCCT CCTGAGTTTTATCCTTCCTGGGTTGTCTTCTCCGAGCGTCAGAA(g) all transcripts have extra g phase (0) ac005106.2 57358-57462(includes g) - TTGACTTGGCTCAACCATCACTTGACAAAGATCTGGCCTTATGTTGATGAG phase 0 ac005106.2 57600-57650 - GCAGCCTCTGAGCTTATAAAGGCATCCGTGGAGCCTGTTCTTGAGCAATATAGACCTGCC ATTGTGGCCTCCTTAACATTTTCTAAGCTTACTCTCGGTACAGTGGCACCTCAATTTACAG phase +1 ac005106.2 57771-57891 - GTGTTTCCGTTATCGACGGTGATAAAAATGGGATTACCTTGGAACTTGATATGCAATGGG ATGGAAACCCAAATATAGTACTTGGCGTCAAGACCTTAGTTGGTGTATCCCTCCCCATTCAG phase 0 ac005106.2 58304-58425 - GTGAAAAACATCGGATTCACTGGTGTTTTCAGGCTAATTTTTAGGCCACTAGTTGAGGAC TTTCCCTGCTTTGGAGCTGTCAGCGTTTCTCTTAGAGAAAAG phase 0 ac005106.2 58583-58684 - AAAAAATTGGACTTCACCCTTAAGGTTGTTGGAGGTGATATTTCAGCAATTCCTGGACTT TCTGAAGCTATTGAG phase 0 ac005106.2 58915-58989 - GAAACAATTCGGGATGCCGTGGAAGATTCTATCACATGGCCTGTTCGGAAGGTCATCCCA ATTATACCTGGTGATTATAG phase +2 ac005106.2 59402-59481 - CGATCTGGAGCTAAAGCCTGTTGGAATGTTAGAGGTGAAGCTTGTGCAAGCAAAGAACTT GACCAACAAAGATCTAGTTGGAAAATCAGACCCCTTTGCTAAAATGTTTATACGCCCTTT GCGTGAAAAGACTAAAAGAAGCAAGACAATT phase 0 ac005106.2 59677-59827 - AACAATGACCTGAATCCCATCTGGAATGAGCATTTTGAATTTGTTGTGGAAGACGCGTCA ACTCAACATTTAGTGGTCAGAATATATGATGACGAGGGTGTACAAGCATCTGAGCTTATT GGTTGTGCCCAAATCCGGCTTTGTGAACTTGAACCTGGTAAAGTGAAAGACGTCTGGTTG AAGCTGGTCAAAGATTTGGAGATCCAGAGAGATACTAAGAACCGTGGAGAG phase 0 ac005106.2 59901-60131 - GTTCACCTTGAGCTCCTTTACATCCCTTATGGTTCGGGAAACGGCATTGTAAATCCCTTT GTCACTTCATCGATGACGTCCTTAGAGAGGGTGCTCAAGAATGATACAACAGATGAAGAA AATGCATCAAGCCGTAAAAGAAAAGATGTCATTGTAAGAGGAGTTCTCTCTGTGACAGTG ATATCTGCAGAAGAGATACCAATACAAGATCTGATGGGGAAAGCTGATCCATATGTTGTT CTCTCGATGAAGAAATCAGGTGCCAAGAGCAAAACTCGG phase 0 ac005106.2 60233-60511 - GTCGTCAATGACAGCTTGAACCCGGTATGGAACCAGACTTTTGATTTTGTAGTTGAAGAC GGGTTACATGATATGCTAGTCCTTGAAGTCTGGGACCACGACACCTTTGGAAAG phase 0 ac005106.2 60602-60715 - GACTACATTGGGAGATGTATCCTCACGTTGACAAGGGTTATAATGGAAGAGGAGTACAAA GACTGGTACCCATTAGACGAATCCAAAACGGGCAAGCTTCAGCTGCATCTGAAGTGGATG GCTCAATCAATTTATCGTGATTCCTAAGCTTAATCGGTAGAATCAATTTATCGTGATTCC *** TAAGCTTAATCGGAAGATTCACAACTTCGAATGTACATGTTGTCTAGTAGCGTCAAACGG ATGTGTTTTGTCAAACAAAGACGAGTCTGCATGTAGCCCAGAAGCTGTGGACTCGGAATA TGAGTTTTCCTCTTTTTTTCTGAAAACCCTAGACAATACTCGTGTACGTTTGCCTCATAA GCTCAGATGTCATAAGGGGTTTGATCTTTGCGTGCATCACAATCCTTCAATAATTTTTTA CCTTTTACCCT ac005106.2 60867-61297 -------------------------------------------------------------------------------- 95. Oryza chromosome 4 cDNA/est evidence agrees with gene prediction OSJNBa0033G05.21 http://www.ncgr.ac.cn MGFLVGLVLGIAAGVALIVGFARAENSRAARRRQL^ AATIASFSKMTIEDSRKLLPADLYPSWVVFSTQQK^ LKWLNQELIKIWPFVNA^ AASELIKTSVEPVLEQYRPIILASLKFSKLTLGTVAPQFT^ GVSIIENDESGIVMELEMNWDANPSIILDVKTRLGVSLPIQ^ VKDIGFTGVFRLIFKPLVDQLPCFGAVCFSLRKK^ KKLDFRLKVIGGEISAIPGISDALE^ DTIKNAIEDSITWPVRKVIPIIPGDY^ SDLELKPVGTLEVKLVQARDLTNKDLIGKSDPFAIVYVRPLPDKMKRSKTI^ NNDLNPIWNEHFEFIVEDADTQTVTVKIYDDDGIQESELIGCAQVTLKDLQPGKVKDVWL KLVKDLEIQRDRKDRGQ^ VHLELLYCPFDMKEETPNPFRQQFSMTSLERTMTSMENGSGSNGFNRLSSRKKKEIIMRG VLSVTVISGEDLPAMDMNGKSDPYVVLSLKKSKTKYKTR^ VVSESLNPVWNQTFDFVVEDGLHDMLMLEVYDHDTFSR^ DYMGRCILTLTKVLIEEDYKDSFKLEGAKSGKLNLHLKWSPQPIFRDSREEDSLRFR - ATGGGGTTCCTGGTGGGGTTGGTGCTGGGGATCGCGGCGGGCGTGGCTCTCATAGTGGGC *** TTCGCCCGCGCCGAGAACTCCCGCGCCGCCCGCCGCCGGCAGCTG phase 0 al606454.3 122964-123068 - GCTGCCACAATTGCTAGTTTCTCCAAGATGACTATTGAAGATTCACGGAAGTTACTCCCA GCTGACCTGTACCCTTCCTGGGTTGTTTTCTCAACACAGCAAAAG phase 0 al606454.3 123771-123875 - TTAAAATGGCTCAATCAAGAGCTGATAAAAATATGGCCATTTGTGAACGCG phase 0 al606454.3 123965-124015 - GCAGCATCAGAACTGATCAAAACCTCCGTGGAGCCTGTTCTTGAACAATATCGACCAATA ATCTTAGCTTCTCTCAAGTTCTCAAAACTCACTCTTGGTACTGTTGCACCACAGTTTACT G phase +1 al606454.3 124116-124236 - GTGTTTCGATCATTGAGAATGACGAATCAGGCATTGTCATGGAACTAGAGATGAATTGGG ATGCCAATCCAAGTATCATACTAGACGTAAAAACTAGACTTGGCGTGTCACTTCCAATAC AG phase 0 al606454.3 124782-124903 - GTGAAAGATATTGGCTTTACAGGAGTTTTCCGCTTGATCTTCAAGCCACTTGTTGATCAG TTGCCCTGCTTTGGAGCAGTTTGCTTTTCTCTACGAAAGAAG phase 0 al606454.3 125319-125420 - AAAAAGCTGGATTTCAGACTGAAGGTCATTGGTGGTGAAATTTCTGCTATACCTGGGATT TCGGATGCTCTTGAG phase 0 al606454.3 125513-125587 - GACACAATAAAAAATGCTATAGAAGACTCAATAACATGGCCTGTAAGGAAAGTCATTCCT ATAATACCTGGGGACTACAG phase +2 al606454.3 125678-125757 - TGATTTGGAACTAAAGCCTGTTGGTACATTGGAAGTCAAGCTAGTACAAGCGAGGGATTT GACGAACAAAGATCTGATAGGAAAATCTGACCCTTTTGCAATTGTGTATGTACGACCCTT GCCAGATAAAATGAAGAGAAGTAAAACAATT phase 0 al606454.3 125888-126038 - AACAACGACTTGAACCCTATCTGGAATGAACACTTTGAGTTTATTGTTGAAGATGCAGAT ACTCAGACTGTGACAGTGAAGATTTATGATGATGATGGTATTCAGGAATCTGAATTGATT GGCTGTGCTCAAGTTACTCTGAAGGATCTACAGCCAGGCAAAGTGAAGGATGTCTGGTTG AAGCTTGTAAAAGACTTGGAGATTCAAAGGGACCGGAAAGATCGGGGTCAG phase 0 al606454.3 126137-126367 - GTGCATCTTGAGCTACTCTACTGCCCATTTGACATGAAGGAGGAGACTCCAAATCCTTTT AGACAGCAGTTTTCTATGACATCCTTGGAGAGGACAATGACGAGCATGGAAAATGGGTCA GGGAGCAATGGTTTTAACAGGTTGTCTTCCAGGAAGAAAAAAGAAATCATTATGCGGGGA GTTTTGTCAGTAACTGTGATATCTGGGGAAGATCTGCCAGCAATGGATATGAATGGAAAG TCTGACCCATATGTTGTACTTTCACTCAAGAAATCAAAAACCAAGTACAAGACAAGG phase 0 al606454.3 126508-126804 - GTTGTGAGCGAAAGCTTGAATCCAGTTTGGAACCAAACTTTTGATTTTGTTGTCGAAGAT GGTTTACATGATATGCTTATGTTGGAAGTATATGATCATGATACTTTTAGTAGA phase 0 al606454.3 126925-127038 - GATTACATGGGACGGTGCATCCTAACATTAACGAAGGTCTTGATCGAAGAAGATTACAAG GACAGCTTCAAACTGGAGGGAGCAAAGTCCGGGAAACTGAACTTGCATCTGAAGTGGTCG CCGCAACCAATCTTCCGTGATTCGCGAGAAGAGGACAGCTTAAGATTCAGATGAGTTTTG *** TATGCGCGGAGAGTCATAGATGCGTGTGGGCATCTGGTTTCTGCGGGCCGGATGTGATGA GGGTTTCCTCCTGAAAACCTGATGAGTTCAGTCATCTCTTTTTTGCGGTGCAATTT al606454.3 127144-127439 -------------------------------------------------------------------------------- 96. Oryza chromosome 8 does not agree with gene prediction P0045D08.22 http://rgp.dna.affrc.go.jp cDNA/est evidence MAFLLGAFLGLVLGVAVVMAFARLENTRAEQRREL^ AATVSSFSKLTVEDLRKLIPLELYPSWVSFTQKQKLK^ RNA editing? WLNQELVKIWPFVNE^ AASELIKTSVEPIFEQYKSFILSSLHFSKLTLGTVAPQFT^ GVSILDSDSSGITMELELQWDGNPNIVLDIQTTLGISLPVQ^ VKNIGFTGVLRLVFKPLVAELPCFGAVCCSLREK^ SKVDFTLKVIGGEMTAIPGISDAIE^ GTIRDTIEDQLTWPNRIVVPIVPGDY^ SDLELKPVGLLEVKLVEARDLTNKDLVGKSDPFAVLYIRPLQDKMKKSKTI^ NNDLNPIWNEHYEFVVEDTSTQRLTVKIYDDEGLQASELIGCARVDLSDLQPGKVKEVWL DLVKDLEIQRDKKRRGQ^ VHLELLYYPFGKQEGVSNPFADQIQLTSLEKVLKTESNGFDVNQRKNVIMRGVLSVTVIS AEDLPPMDVMGKADPFVVLYLKKGETKKKTR^ VVTETLNPIWNQTFDFVVEDALHDLLMVEVWDHDTFGK^ DYIGRCILTLTRVILEGEFQDEFVLQGAKSGKLNLHFKWTPQPIYRDRDRDQ - ATAAAAAAATTGGAAAAAGAGAAATAGAAAAGGAAGCGCACCACCGCTCTCGGCTCGCCT TCCCTTGGTTCCCGCACCTTCTCCTCCGCATCGAGGCAAATCAATCAATCCAATCCATCC CACACACCGCCCATCTCCCTGGCGGGCAGCCTCGGCCTCGCGAGGGAGGGGAGGAGGAGG AGAGTGGCGGCGGCGGCGGCGCGCCATGGCGTTCCTGCTCGGCGCCTTCCTCGGGCTGGT *** GCTCGGCGTCGCCGTTGTCATGGCGTTCGCGCGCCTCGAGAACACCCGCGCTGAGCAGCG CCGCGAGCTG phase 0 ap004458.2 (93589-93280) - GCTGCTACTGTTTCATCCTTCTCAAAGTTGACTGTAGAAGATTTAAGGAAACTAATTCCT CTTGAGTTATATCCATCATGGGTGTCTTTCACTCAAAAGCAAAA(g) transcripts all have extra g phase (0) ap004458.2 (90138-90034)includes g - CTTAAATGGCTGAATCAAGAATTGGTAAAAATCTGGCCATTTGTCAATGAG phase 0 ap004458.2 (89942-89892) - GCTGCATCAGAACTGATAAAAACTTCTGTGGAGCCTATTTTTGAGCAGTACAAGTCATTC ATTTTGTCCTCACTCCATTTCTCAAAGTTGACACTTGGAACAGTTGCCCCTCAGTTTACA G phase +1 ap004458.2 (89736-89616) - GAGTTTCAATTTTGGATAGTGATAGTTCTGGTATCACTATGGAGCTTGAGTTGCAATGGG ATGGCAATCCAAATATAGTACTGGACATTCAAACAACACTTGGAATCTCACTTCCTGTGC AG phase 0 ap004458.2 (86770-86649) - GTGAAAAATATTGGATTCACAGGAGTACTTCGCTTAGTTTTTAAGCCTCTGGTTGCAGAA CTGCCTTGCTTTGGAGCTGTTTGCTGTTCTTTGAGAGAGAAG phase 0 ap004458.2 (85742-85641) - AGCAAGGTCGATTTTACCCTCAAGGTTATTGGTGGTGAGATGACAGCAATTCCTGGAATT TCTGATGCAATTGAG phase 0 ap004458.2 (85562-85488) - GGAACGATACGTGATACCATTGAGGATCAGTTGACATGGCCTAATCGCATAGTTGTACCT ATTGTGCCTGGAGATTATAG phase +2 ap004458.2 (85408-85329) - TGACTTGGAGCTGAAACCAGTTGGACTATTAGAAGTAAAACTTGTGGAAGCTAGGGACTT GACGAACAAGGATCTTGTGGGGAAGTCTGACCCTTTTGCTGTGTTATACATTCGGCCATT GCAAGATAAAATGAAGAAAAGCAAAACAATA phase 0 ap004458.2 (85243-85093) - AATAATGATTTGAACCCCATCTGGAATGAGCACTACGAATTTGTGGTCGAGGACACATCT ACCCAGCGCTTGACTGTGAAAATTTATGATGATGAAGGACTCCAGGCATCTGAGCTTATT GGCTGTGCTAGAGTGGACTTGTCTGATCTTCAGCCTGGAAAAGTCAAAGAAGTTTGGTTG GACCTTGTCAAGGACCTGGAAATCCAGCGGGATAAGAAACGTCGCGGGCAG phase 0 ap004458.2 (85003-84773) - GTACACCTGGAGCTCCTGTATTACCCTTTTGGTAAACAGGAAGGGGTTTCCAATCCTTTT GCAGATCAGATTCAGTTAACTTCTTTGGAGAAGGTCCTCAAGACTGAGTCTAACGGATTT GATGTTAACCAGAGGAAAAATGTTATTATGAGAGGAGTCCTATCAGTAACTGTTATCTCA GCAGAGGACTTGCCACCAATGGATGTGATGGGCAAGGCTGACCCATTTGTAGTCCTGTAC CTGAAGAAGGGAGAAACCAAAAAGAAGACAAGG phase 0 ap004458.2 (84570-84298) - GTTGTAACTGAGACACTGAATCCAATATGGAATCAGACGTTTGATTTTGTTGTTGAAGAT GCCTTGCATGATTTACTCATGGTGGAAGTATGGGATCATGATACGTTTGGAAAG phase 0 ap004458.2 (84192-84079) - GATTACATAGGGAGATGCATCTTGACACTTACGAGAGTAATACTCGAAGGCGAGTTTCAG GATGAGTTTGTTTTGCAAGGTGCTAAATCCGGAAAGCTGAACTTGCACTTCAAGTGGACG CCGCAGCCAATTTATCGTGATCGTGATCGGGACCAGTGAAATCTGTGTAGATACATCACG *** TCAAGCAGCTGATAAATATTTCTTCCCCTACGGTGCCTGTACATTAGTTTTTCTGTACAG TTAATTCACTTATCTTGTAGCAACAAGGTGTAATGGAATAAAAGAATGGTGGTTTCATGT TCCGACGGAAATGCGATGTGCTATGAATGGAGGGTTGCAGAAAGATGGATGGTAACACGG GGAGATGGGTTACCCAAGTATGGAAACATTAAGTTCATCATGCAAGCAGATACTTTATGC ATCTTCTACTGGTAAAACTAAACGTGTTTGTCTTTAAAATGCAACTTGTAATATAATTCC TTGTACTAACAATTACTACCTCCGTCCCATAATAATTGC ap004458.2 (83471-82953) -------------------------------------------------------------------------------- 97. Arabidopsis sytF AtsytF chromosome 3 Abundant cDNA/est evidence does not agree with gene prediction MYF24.9 kaos@kazusa.or.jp MGRRIKRKGLINTEAAREFINHLVAERHSLLLLVPLVLAFWAIERWVFAFSNWVPLVVAV WASLQ^ YGSYQRALLAEDLTKKWRQTVFNAS^ TITPLEHCQWLNKLLSEIWLNYMNKKLSLRFSSMVE^ KRLRQRRSRLI^ ENIQLLEFSLGSCPPLLGLHGTCWSKSGEQ^ KIMRLDFNWDTTDLSILLQAKLSMPFNRTARIVVNSLCIKGD^ ILIRPILEGRALLYSFVSNPEVRIGVAFGGGGGQSLPATELPGVSSWL^ VKILTETLNKKMVEPRRGCFSLPATDLHKTAIGGIIYVTVVSGNNLNRRILRGSPSKSSE IGEGSSGNSSSKPVQTFVEVELEQLSRRTEMKSGPNPAYQSTFNMILHDNTGTLKFNLYE NNPGSVRYDSLASCEVK^ MKYVGDDSTMFWAVGSDNGVIAKHAEFCGQEIEMVVPFEGVSSGE^ LTVRLLLKEWHFSDGSHSLNSVNSSSLHSLDSSSALLSKTGRKIIVTVLAGKNLVSKDKS GKCDASVKLQYGK^ IIQKTKIVNAAECVWNQKFEFEELAGEEYLKVKCYREEMLGTDNIGTATLSLQGINNSE^ MHIWVPLEDVNSGEIELLIEALDPEYSEADSSKGLIELVLVEARDLVAADIRGTSDPYVR VQYGEKKQRTK^ VIYKTLQPKWNQTMEFPDDGSSLELHVKDYNTLLPTSSIGNCVVEYQGLKPNETADKWII LQGVKHGEVHVRVTRKVTEIQRRAAQVLAHRLTKLCYCPTR - GCTATCACAATGTTCAATTTGTCTAAAGATCCGTTACCTCTCTATGCGAGAGAAGCTGTG AGAGAGTTTCCGACAAGTAACTAGGAGATCGTAATTCTTGTCTGAAAAACAACTTTTTTT ATTCGAAACTTCTCTCACAGATTTTTCTCAGTTTTTCCAGAAATTTTGTTCTTCTTCGTC CACTCACCGTGGATCTCTCTAGTTTGTTGAAGAAATCAAATTGTGGAATAAATAAAAAAA CAGAGAAATAAATACTGCAAGGAAAGTTTCTTACTTCGTCACTTTGACCCAGAAAGCTTT CAGATTTTCCCGGAAAAGAAATCTGCTGGAGAAATTTCATTGACTGACTTATGGATTTGT GAAGAAGCTTGAAGGCGAATCGAAGAGATGGGTCGGAGAATAAAGAGGAAAGGTCTGATA *** AACACGGAAGCTGCAAGAGAATTTATCAATCATCTAGTTGCTGAGAGGCATTCGCTGTTG TTGCTGGTTCCTTTGGTCTTAGCTTTCTGGGCAATTGAAAGATGGGTCTTTGCTTTCTCC AATTGGGTTCCTCTCGTTGTCGCCGTCTGGGCTTCTCTTCAG phase 0 ab026658.1 24090-24671 - TATGGAAGTTACCAAAGGGCACTACTTGCAGAAGATCTAACCAAGAAGTGGAGGCAAACC GTTTTCAATGCGTCG phase 0 ab026658.1 25127-25201 - ACGATAACTCCATTGGAACATTGTCAATGGCTGAACAAGTTACTGTCTGAAATTTGGCTA AACTATATGAACAAGAAACTCTCTCTTAGGTTTTCTTCTATGGTGGAG phase 0 ab026658.1 25295-25402 - AAACGATTGAGGCAACGAAGATCAAGATTAATC phase 0 ab026658.1 25514-25546 - GAAAATATACAATTGTTGGAGTTTTCTCTTGGCTCATGCCCTCCTTTGCTAGGACTACAT GGAACTTGTTGGTCAAAATCAGGGGAACAG phase 0 ab026658.1 25642-25731 - AAAATCATGCGATTGGATTTCAACTGGGACACAACGGATCTAAGTATTTTGTTGCAAGCC AAGTTATCCATGCCGTTTAATCGAACAGCACGAATCGTTGTCAACAGTCTCTGCATCAAG GGAGAT phase 0 ab026658.1 25816-25941 - ATTCTGATCAGACCGATTCTTGAAGGAAGAGCATTGCTTTATTCCTTTGTATCGAATCCT GAAGTTAGAATCGGAGTTGCTTTCGGTGGTGGCGGTGGCCAATCTCTCCCCGCTACAGAG CTTCCTGGTGTCTCCTCTTGGCTG phase 0 ab026658.1 26022-26165 - GTAAAGATTCTAACGGAAACTTTGAACAAGAAGATGGTAGAGCCACGCCGGGGATGTTTC TCGTTACCCGCAACAGATCTTCACAAAACAGCCATCGGGGGAATTATCTACGTAACCGTT GTATCTGGTAACAATCTTAACCGCAGAATTCTTCGGGGAAGCCCCTCGAAAAGTTCTGAG ATCGGAGAAGGTAGCAGCGGAAATAGCAGCAGCAAACCTGTTCAAACATTTGTGGAGGTC GAACTCGAGCAACTTTCTCGACGAACCGAGATGAAGTCAGGACCGAATCCAGCTTATCAG TCGACATTTAACATGATCTTACACGACAATACAGGGACACTCAAGTTTAACCTCTATGAA AATAATCCTGGGAGTGTCAGATATGACAGTCTCGCTAGCTGTGAAGTTAAG phase 0 ab026658.1 26254-26664 - ATGAAATATGTAGGTGATGATTCAACGATGTTTTGGGCCGTTGGATCTGATAACGGTGTG ATTGCAAAACACGCTGAGTTCTGTGGTCAAGAAATCGAGATGGTTGTTCCGTTTGAAGGA GTTAGCTCCGGAGAG phase 0 ab026658.1 26744-26878 - TTGACTGTCCGGCTACTTCTAAAAGAATGGCACTTCTCTGATGGCTCACATAGCTTGAAT AGCGTTAATTCGAGTTCATTACACTCCCTCGACAGCTCGTCTGCCCTCCTCTCGAAAACC GGCCGGAAAATTATCGTGACGGTTTTGGCTGGAAAGAACCTTGTTTCTAAAGATAAGTCC GGAAAATGTGATGCCTCTGTCAAGTTACAGTACGGAAAA phase 0 ab026658.1 26982-27200 - ATTATACAAAAGACGAAGATAGTGAACGCAGCAGAGTGTGTGTGGAACCAGAAATTTGAG TTCGAAGAGTTAGCCGGAGAAGAATATTTAAAGGTGAAATGCTATAGAGAAGAGATGCTT GGCACGGACAACATCGGTACAGCTACATTGAGTCTTCAAGGAATCAATAACAGCGAAATG CATATATGGGTTCCGCTTGAAGATGTTAATTCTGGAGAAATAGAGCTTTTGATCGAAGCT TTGGATCCCGAGTACAGCGAA phase 0 ab026658.1 27291-27551 - GCGGATTCTAGTAAAGGCTTGATTGAATTGGTTCTCGTTGAAGCGCGGGATCTTGTGGCC GCGGATATTAGAGGAACCAGTGATCCTTATGTTAGGGTTCAATATGGAGAGAAGAAACAG AGGACAAAG phase 0 ab026658.1 27631-27759 - GTGATTTATAAGACGTTGCAACCAAAATGGAACCAGACAATGGAGTTTCCAGATGATGGG AGCTCCTTGGAGCTACATGTGAAAGACTATAACACTCTGCTTCCGACTTCAAGCATCGGT AACTGCGTTGTGGAGTACCAAGGGTTAAAGCCAAATGAGACTGCCGATAAGTGGATAATT CTCCAAGGAGTGAAACACGGGGAGGTCCATGTCAGAGTCACGAGGAAAGTCACGGAGATT CAGAGACGCGCAGCGCAGGTCCTGGCACACCGTTTAACAAAGCTCTGTTACTGTCCAACC AGATGAAGCAGGTGATGATAAAGTTTCAGAATTTGATTGACGATGGAGATCTTGAAGGTC *** TTGCTGAAGCTTTAGAAGAGCTGGAAAGTTTGGAGGACGAACAAGAACAGTATTTGCTCC AGCTTCAGACAGAGCAATCGCTGCTTATCAACAAGATCAAAGACCTTGGTAAGGAGATTC TTAACTCATCCCCAGCTCAAGCCCCGTCTCGAGATTCTTAACTCGTCCCCAGTTCAAGCC CCGTCTCATTCCCCATCTCGATCAGGCTCGGGTTCGGGGACAGGATCCTCCTATAACCGG AGATTACCCGCACCAATGTAGTCACTTGTTTTTCCCGATCAAACAATCATCTATGATGTA TATAGATAGATATGTAGGGGCATTGGATAAAATGTTCAGAGAGAGTTGAGCCCTTGTTAC AAAGTTAGATACATATGATATGTAACATATCAAATCTGTAAGTTTCTTATTATTCCCTTT GTTATTCTGTAACAATAAAAACTGTTGTAATTGTTTGTAAAACTGTTGTTCTGTGTCTAG GCTGATCAGTCATTTACAGAAGCAAAATAGTTCTTTTGACCTCAA ab026658.1 27850-28735 -------------------------------------------------------------------------------- 98. Oryza sytF OssytF chromosome 1 cDNA/est evidence no gene prediction for this area http://rgp.dna.affrc.go.jp MAKKKLKKLHAKDALEFFNQVMVEQPLLPFLVPLVLFAWFVERWVVPFSNWVPLLAAVWA TIQ^ YGRFKRRSAIEDLNKRWKHLILNTT^ PTTPIEPCEWLNKLLVEVWPNYMEPKLSKKFQSTVE^ KRLKHRKPKLI^ DKIELQEFSLGCCPPTLGEHGMRWMTSGDQ^ KVMRLGFDWDSNEMSVMFLAKLAKPLIGAARIVINSIHIKGD^ LLLLPILDGEAILYSFESTPEVRIGVAFGSGGSQAVPGMELPGVSTWL^ VKLLTETIVKTMVEPRRLCFSLPPVDLRKRAVGGVLSVTVVSASNVGRNTTNEIGIRQSS SGGSTSGIADNKVSQTFIEVEVGSLVRKTSTSKGPNPAWNSTFNLVLHGETGVVKFNLYE LDSGGVKVTYLTSCEIK^ VKYVLDDSTIFWAIGHNSGAVAKRTELCGQEVGMVVPFEDIRGE^ LTVTLVLKEWQFSDGSVTLSNSLSNGSHSSFDVSPKLQSRTGRKLRVAVVEGKALAVNGK SGKCDPYVKVQYGK^ ALYKTKTLSHTTRPVWNDKFEFDEITGGEYLKIKCYSADTFGDESIGSARVNLEGLLDGD SREVWVPLEKVDSGEIRLQIEPIKSDFNGILK^ TSSGRVEATWIELVIIEARDLIAADLRGTSDPYVRVHYGSKKKRTK^ VVYKTLSPDWNQTFEFPETGEPLILHVKDHNAVLPTASIGQCTVEYSMLPPNQPAVKWIP LQGVKSGEVHVKITRKVPHLEKKTSFQTDASSLGKGHKISSQ^ MRDSLKKFTGLVDEGGDTEAMSLALTEIESIQDEQDMYIQQLEREKAALLRKIQELGSEI VRTSSGPARMPY - TTATCAGAGAAGAGAGCTTTGCTGAATTCACAGAGCAGCAGGGAGGAGAGATGGCGAAGA *** AGAAGCTGAAGAAATTGCATGCCAAGGATGCACTAGAATTTTTCAACCAGGTCATGGTGG AGCAGCCCTTGCTCCCCTTCCTGGTCCCTCTTGTCTTGTTTGCATGGTTTGTTGAACGAT GGGTTGTGCCATTCTCAAACTGGGTTCCCCTGTTGGCTGCTGTATGGGCAACAATTCAG phase 0 ap002538.2 35227-35465 - TATGGGAGGTTTAAAAGGAGGTCAGCCATAGAAGATTTGAACAAACGATGGAAGCATCTT ATACTGAATACAACA phase 0 ap002538.2 35757-35831 - CCTACGACGCCAATAGAGCCTTGCGAGTGGTTGAACAAACTTTTGGTAGAAGTTTGGCCC AATTATATGGAACCAAAACTGTCAAAGAAGTTTCAATCTACTGTTGAG phase 0 ap002538.2 35912-36019 - AAACGTTTAAAGCATCGAAAACCAAAACTAATA phase 0 ap002538.2 36476-36508 - GATAAAATAGAGTTACAGGAATTCTCACTTGGTTGTTGTCCACCTACCTTGGGGGAGCAT GGGATGCGCTGGATGACTTCAGGTGACCAG phase 0 ap002538.2 36590-36679 - AAAGTCATGCGCTTGGGTTTTGATTGGGACAGCAATGAGATGAGTGTAATGTTTTTGGCA AAATTAGCAAAACCACTGATTGGCGCTGCTCGAATTGTTATAAACAGCATTCACATCAAG GGAGAT phase 0 ap002538.2 37199-37324 - CTTCTACTGTTACCCATCCTTGATGGTGAAGCTATTCTTTATTCTTTTGAATCCACTCCA GAAGTCAGGATAGGAGTGGCATTTGGAAGTGGTGGAAGCCAAGCAGTTCCTGGTATGGAG CTACCCGGTGTCTCAACATGGCTG phase 0 ap002538.2 37814-37957 - GTTAAGCTTTTGACCGAAACCATAGTGAAGACAATGGTTGAGCCTCGCAGATTGTGTTTT TCTTTGCCACCAGTAGATTTAAGGAAACGAGCAGTTGGAGGTGTTCTTTCAGTCACAGTT GTTTCAGCTAGTAACGTTGGGAGAAACACAACTAATGAAATAGGGATCCGCCAAAGCTCA AGTGGAGGTTCTACATCTGGAATTGCTGATAACAAGGTATCACAGACATTTATTGAGGTA GAAGTTGGTAGTTTAGTGAGAAAAACAAGTACAAGCAAGGGTCCAAACCCTGCATGGAAT AGCACATTTAACCTGGTATTGCATGGAGAGACAGGTGTTGTCAAGTTCAATCTGTATGAA TTGGACTCTGGTGGTGTTAAGGTCACCTACTTGACAAGCTGCGAGATAAAG phase 0 ap002538.2 38076-38486 - GTCAAGTATGTTCTAGATGATTCAACAATATTTTGGGCTATAGGACATAATTCTGGTGCT GTTGCAAAACGTACTGAGCTTTGTGGACAAGAAGTTGGAATGGTTGTTCCATTTGAGGAC ATCAGGGGCGAG phase 0 ap002538.2 38591-38722 - TTAACTGTCACTCTTGTGCTAAAAGAATGGCAATTCTCTGATGGCTCAGTTACGTTGAGC AATTCTCTGAGCAACGGATCCCACTCTTCATTTGATGTATCGCCCAAGCTTCAGTCCAGA ACAGGACGGAAACTCAGAGTTGCAGTAGTTGAGGGTAAAGCCCTTGCAGTTAACGGTAAA TCTGGAAAGTGTGATCCATATGTGAAAGTGCAGTATGGAAAG phase 0 ap002538.2 39481-39702 - GCTCTATACAAAACAAAAACACTATCTCATACAACTCGACCGGTTTGGAATGATAAATTC GAGTTTGATGAGATCACTGGTGGTGAATATCTCAAGATCAAATGCTATAGTGCAGATACA TTTGGAGACGAAAGCATTGGCAGCGCAAGAGTAAATCTAGAAGGACTTTTAGATGGTGAT AGCCGTGAAGTATGGGTTCCACTTGAAAAGGTGGATTCAGGAGAGATCAGGCTTCAAATA GAGCCAATAAAGAGTGATTTCAACGGTATCCTGAAG phase 0 ap002538.2 39783-40058 - ACTTCAAGTGGTAGAGTTGAAGCTACCTGGATTGAGCTAGTGATAATTGAAGCTAGGGAT CTTATTGCTGCTGATCTCAGAGGCACTAGTGATCCTTATGTCAGGGTGCATTATGGGAGC AAGAAGAAGCGAACTAAG phase 0 ap002538.2 40347-40484 - GTTGTTTACAAAACACTCTCTCCAGATTGGAACCAGACATTTGAGTTTCCAGAAACAGGA GAACCCCTGATTTTACATGTCAAGGACCATAATGCAGTCCTTCCAACTGCTAGTATAGGC CAATGCACTGTCGAATACAGCATGCTTCCTCCAAATCAGCCCGCCGTAAAATGGATACCA CTCCAAGGAGTAAAAAGCGGAGAAGTCCATGTAAAGATCACGCGAAAAGTACCACACTTG GAGAAGAAAACAAGCTTTCAGACTGATGCATCTTCCCTTGGCAAAGGGCACAAGATATCA TCGCAG phase 0 ap002538.2 41003-41308 - ATGAGAGATAGCCTGAAGAAATTCACAGGTTTAGTTGATGAGGGTGGCGACACAGAGGCC ATGTCACTGGCCTTGACAGAGATTGAAAGCATCCAGGATGAGCAAGACATGTACATACAG CAGCTTGAGCGGGAGAAAGCGGCTTTGTTGCGTAAAATACAAGAGCTTGGTTCTGAAATC GTCAGAACATCCTCTGGTCCGGCAAGGATGCCCTACTAGTTAACAACCAATACACAGGAA *** CAAAGAATAGCCTTCACAGTTGTATTCATTGGCAAAGACCTGAATTATTTACATAGAACT ATACTCTAGTGCAGATATGTTTTTGAACGAACCGGCACAGAGTGTGCCAATTTCATTGAA TATAGCATAGTGCAGATATGTTACCATGTAAGTAGATACACAGCAAGCAAACCACAAACT CAAGACTCAGTGCAGTATATTTTGTAGTGCTGAAAGACCAATCAGTCCATGTAACTTACT CTATAATCTATATATATGTACACATCAATACATACAGACAATTTAGGTGAATCCTG ap002538.2 41434-41969 -------------------------------------------------------------------------------- 99. Ceratopteris Partial amino acid sequence from 2 ests be642184 and be642373 TLQSLLPEIPLWVKNPDYDRVDWLNKFVRDLWPYLDKAICKTIQETTQSMVEEYSAKFKF DSIEFEHLTLGAFPPTLEGIKAFDTQESEMIIEPALKWAGNPDILIAVKVFGIRATIQLV DLQFFGIVRLTFKPLLPTFPCFSKIAISIMEKPQVDFGLKLFGGDLMAIPVLYGFVQDLI KEEIAKLYLWPKIFELVLLDESEVSTKKPVGIVEVKVLYARNLRKADIMGKSDPYLKISL VKKVLKKTQVKKNTLNPDWNETHTLVVQDPSIQVLEFHAYDWEKISSHDKLGMATFSLAS LEPDVPEHLTLNLRKNMDDNGSVNQKSWGQLVVEVTYKPFKQDLPVQNETETVAPEGTPQ AGGLLVITVHGAHGLEGKHHTNPYAKVVYRGEEYKTKPLKKNRNPRWPDGKFEICCDNPP LNEMVRIEIMTKSSGFGMHLKESLGYKDIMLADVGENSVSMKNLRQITSKWQSTH -------------------------------------------------------------------------------- 100. Physcomitrella Partial amino acid sequence from 2 ests bj166699 and bj602006 C-terminus complete LQTVPLFKNMDPNDEANSKKRGELTFEMNLRLFKEDDTEEDIKAKSMDDGQFANGVKSSE GGLLSVIIHQAQELEGKHHTNPFVEVNFRGDKKKTPVVKKNKNPRWDQLFTWQLDDPPVS DSLHIEVLSKGSSLNMVHRHEILGSVNIPLGDVVKNKNINSKYGLANSHGMIQVELKWKP V -------------------------------------------------------------------------------- 101. Physcomitrella Partial amino acid sequence from 12 ests bj597798,bj598213,bj585764,bj595702,bj609430,bj595777,bj599408,bj607095, bj596625,bj587600,bj171961,aw145652 C-terminus complete HEKMGMVIVPLSELVENVPKLYNGLKLLKNVDXNDEKNLKSRGEITFEILFKPFKDDDDS DDQGEAAADGSQMTPEGTGGGLLTVTIVQAEGLEGKHHNNPFVELHFKGDKRKTHVVKKN REPRWDAEFTWNLEEAPENEHLLLEVHSRGSSMNMVHRQESLGHADISLRDLRGMSKRIN ETYTLVDGHGKIQVVLDWQAV -------------------------------------------------------------------------------- 102. Pinus Partial amino acid sequence from 7 ests bq290916,bf779042,bq702468,bf010852,aw226220,aw758642,cd024158 N-terminus complete MGFVSTLVGFFGFGVGVTIGVIIGYFLFIYFQPTDVKDPIIRPLGELDSKTLEGLLPEIP LWVKNPDYDRVDWLNTFIHDMWPYLDKAICRKIRDTTKPMIDQYVGKFKIESIEFETLTL GTLPPTLQGMKVYETQEKELIMEPALKWAGNPNVIVAVKAFGLRATLQMVDLQVFAVPRV TLKPLVPSFPCFAKIFV -------------------------------------------------------------------------------- 103. Pinus Partial amino acid sequence from 1 est bm427788 DSKDLQRLLPEIPLWVKNPDYDRVNWINRFIFEMWPYLDKAICKMIRDTTMRTVDQYIGQ YKIESIEFETLTLGTMQPTLXXIKVFDTXXXEMXXEPXLR -------------------------------------------------------------------------------- 104. Pinus Partial amino acid sequence from 1 est aw784097 KLPSKKTTVKQSNLNPEWNEEFNFVVKDPESQALELTVYDWEKVGSHEKMGMQAYHLKEL TPSETRSVTLNLLKTLDPNDPQNIKPRGQITLEMTYNPFKEEENLPXXEDDSVVEKAPXX APXGGGXLVVRVIEAXXVE -------------------------------------------------------------------------------- 105. Pinus Partial amino acid sequence from 3 ests bi202834, bq702119, bf609097 LEPGKLKDIHLPLVKDLANRKPDTKNRGQVHLELIYRQFGEENSFGGLFTAGAQPFGMTS LEKVLTHGMNGQRLSSLSPGKRKDIIRGVLSVTVKRAENLISTDLGGKADPYVVLTMKKT DAKKKTRVVPKNLNPEWDQTFDFVVEDALHDMLIVEVWDHDTFSKDFMGKLALTLTKVLH EGEYDGDFPLDVCNPDEYFYLKEQ -------------------------------------------------------------------------------- 106. Physcomitrella sytF PpsytF Partial amino acid sequence from 1 est bq827116 AALHDNLGTVRLNVYEQGHNNVNYDFLGSCEVKVKYVDDDSTIFWAVGPAQSVLISRVPC CGKEVELTIPLENATSGELTVKLLLKEWQFSDGSKAVANYNPALVIHDQQNA -------------------------------------------------------------------------------- 107. Ceratopteris sytF CrsytF Partial amino acid sequence from 1 est be643481 MKPSRMWSSVSTVFTPSSSYAVLLIVAVLASWYVERWCISSSSNWVPLLFILWATIKYEK YRHKVLSEEINRRGRWTMEKSQPLTPLEPCEWLNKLLMDVWANYMEPKLSYKFSSMMMKK LKAKKPNFIESVEVREFSPRFTTLLLGLDRLYWTKEENEAGLHTGCLWD -------------------------------------------------------------------------------- 108. Arabidopsis CaLB chromosome 3 pseudogene1 start 22257 repeat1 20355-30507 pseudogene2 start 83437 repeat2 81535-91669 genuine locus agrees with gene prediction T27I15_140 http://www.mips.biochem.mpg.de/proj/thal/ except 5'UTS exon added here cDNA/est evidence MGLISGILFGIIFGVALMAGWSRMMTHRSSKRVAK^ AVDMKLLGSLSRDDLKKICGDNFPQWISFPAFEQ^ VKWLNKLLSKMWPYIAE^ AATMVIRDSVEPLLEDYRPPGITSLKFSKLTLGNVAPKIE^ GIRVQSFKEGQVTMDVDLRWGGDPNIVLGVTALVASIPIQ^ LKDLQVFTVARVIFQLADEIPCISAVVVALLAE^ PKPRIDYTLKAVGGSLTAIPGLSDMID^ DTVDTIVKDMLQWPHRIVVPIGGIPVDL^ SDLELKPQGKLIVTVVKATNLKNKELIGKSDPYATIYIRPVFKYKTKAIENNLNPVWDQT FELIAEDKETQSLTVE^ VFDKDVGQDERLGLVKLPLSSLEAGVTKELELNLLSSLDTLKVKDKKDRGSITLK^ VHYHEFNKEEQMAALEDEKKIMEERKRLKEAGVIGSTMDAVGMVGSGLGAGVGMVGTGIG TGVGLVGSGVSSGVGMVGSGFGAVGSGLSKAGRFMGRTITGQSSKRSGSSTPVNTVPEND GAKQQ - TTTATCTCACTCTCTGGCCTACCAAAAATACTTCAATGCGTTCTTAATTTTGTTCTGATT CTCCCCACTTGACCAACCCCGTGAGGATAAACTGTTGCCGACGCTTCTCGCCGATAACAC CGGTTTTGTTGTGACGGAAAG al358732.1 95047-95187 - GAAAAATGGGTTTGATTTCTGGGATTCTGTTCGGGATTATCTTCGGCGTAGCTCTAATGG *** CTGGCTGGAGTCGTATGATGACTCACCGATCGTCCAAGCGAGTCGCCAAG phase 0 al358732.1 95276-95385 - GCAGTTGATATGAAACTACTAGGCTCTCTTAGCAGAGACGATTTGAAGAAAATTTGTGGT GATAATTTCCCTCAATGGATATCGTTTCCAGCATTTGAACAG phase 0 al358732.1 95783-95884 - GTCAAATGGCTGAATAAACTACTGAGCAAGATGTGGCCATATATTGCAGAG phase 0 al358732.1 96182-96232 - GCAGCAACAATGGTAATAAGAGATTCTGTTGAACCTCTGCTTGAAGATTACAGACCACCA GGAATTACTTCCCTGAAGTTCAGCAAATTGACGTTGGGTAACGTAGCACCAAAGATTGAAG phase +1 al358732.1 96595-96715 - GTATTCGTGTTCAAAGTTTCAAGGAAGGTCAAGTCACAATGGACGTTGATCTTCGATGGG GTGGTGATCCAAATATTGTTTTAGGTGTGACAGCACTTGTTGCCTCCATACCCATTCAG phase 0 al358732.1 96920-97038 - TTGAAGGATCTTCAAGTTTTCACAGTTGCACGTGTTATCTTTCAACTTGCGGATGAGATT CCTTGTATATCTGCTGTTGTTGTTGCTCTACTTGCTGAG phase 0 al358732.1 97136-97234 - CCAAAACCAAGAATTGATTACACTCTGAAGGCTGTTGGTGGAAGCTTAACAGCAATTCCTG GACTATCTGATATGATTGAT phase 0 al358732.1 97336-97416 - GATACTGTTGATACTATCGTCAAAGACATGCTTCAGTGGCCTCATAGAATTGTTGTTCCCA TTGGTGGTATTCCTGTTGATTTAAG phase +2 al358732.1 97510-97595 - TGATTTGGAGCTTAAGCCACAGGGAAAGCTTATAGTAACAGTTGTGAAAGCAACTAACTTG AAGAATAAGGAATTGATTGGAAAATCTGACCCTTATGCTACCATCTACATTCGTCCTGTAT TCAAGTATAAAACAAAGGCAATCGAGAACAATCTGAATCCTGTCTGGGATCAAACATTCGA ATTGATTGCAGAGGACAAAGAAACCCAGTCGCTCACTGTAGAG phase 0 al358732.1 97796-98021 - GTATTTGATAAAGACGTAGGTCAAGATGAGCGCCTTGGACTTGTGAAACTTCCCTTAAGC AGTTTGGAAGCCGGAGTTACAAAAGAACTGGAGCTAAATCTGTTGTCTTCACTTGATACT TTGAAAGTAAAAGATAAGAAAGATAGAGGAAGCATAACTCTTAAG phase 0 al358732.1 98114-98278 - GTACATTATCATGAGTTCAACAAAGAGGAGCAAATGGCTGCGTTGGAAGACGAGAAGAAG ATCATGGAAGAAAGGAAGAGACTGAAGGAAGCAGGAGTGATAGGTAGCACAATGGATGCA GTCGGGATGGTGGGAAGTGGGCTCGGTGCTGGTGTAGGAATGGTTGGGACCGGTATTGGC ACAGGAGTCGGATTGGTTGGAAGCGGTGTGAGCTCGGGTGTTGGGATGGTTGGTAGCGGT TTTGGAGCGGTCGGTAGTGGATTGAGCAAAGCAGGGAGATTTATGGGAAGAACAATCACA GGTCAGTCTAGCAAACGTAGTGGCTCCTCAACACCTGTGAATACCGTTCCAGAAAACGAT GGTGCAAAACAGCAGTGAGTAAACTTTGGGTTTAAGCAAGATTTGTGATCATGACTTCGT *** TTTTACTCTTTATTGTTCTGTTTTTTTCCCCTTTAACTCTCTCGAACTTGATTTCTGGAT TCACTGCAGTAATTTGTTTTCGTTGTGAGCCTTCAAATTAAAATCTTGTACAAAAGTCAT TTGCTTAATCGTCCTATAAACAA al358732.1 98351-98913 -------------------------------------------------------------------------------- 109. Arabidopsis chromosome 1 cDNA/est evidence does not agree with gene prediction F14I3.13 arab@sequence.stanford.edu MIPQTSSSNFDFRLPVDVSCTLLCPCSNELRAVFFTRSRVLRPSVKISNFRFISCGFRGN SKNLRLTDSSRKAANRFVIARFTNEFEDEGSSKESNDQANFSNFREDPIVDKLRTQLGVI HPLPSPTINRSVISLFVFFFFVGVAFDKLWTWRKRQRETGGDGNQRGVGPWPQVPTSFSL FLEKDLQRKESVEWVNMVLGKLWKVYRAGIENWLVGLLQPVIDDLKKPDYVQRVEIKQFS LGDEPLSVRNVERKTSRRANDL^ QYQIGLRYTGGARMLLMLSLKFGVIPIVVPVGVRDFDIDGELWVKLRLIPTQPWVGAVSC SFVSLPKVTFQLAAFRLFNLM^ GIPVLS^ MFLTKLLTVDLPRLFVRPKKIVLDFQKGKAVGPVLEDLKSGEMQEGNKDFVGELSVTLVD AQKLRYMFF^ GKTDPYAILRLGDQVIRSKRNSQTTVIGAPGQPIWNQ^ DFQFLVSNPREQVLQIEVNDRLGFADMAIGTGE^ VDLRFLQDTVPTDRIVVLRGGWSLFGKGSAGEILLRLTYKSYVEEEEDDKTNVKAIDTSD DEMSDSEELGSFVRKGKLSSDDIDQESFMNVLSALIVSEEFQGIVSSEARDGIIDGGDSL GAPVPSKPDTSKGSERNADVSNLDLLVANSGRGAGGDG^ GLALLWFGIITGILVLVAINMEGSSFFNP - AAAGATATGCGTTATTTTTCTCCTTCTTCTTCGGATACGATTCATAGATGATTCCACAAA *** CTTCTTCTTCGAATTTTGATTTCCGATTACCTGTTGATGTGTCTTGCACTCTGCTCTGTC CATGCTCTAATGAGCTCCGCGCGGTTTTTTTTACAAGGAGTCGGGTTCTGCGTCCGAGCG TCAAAATTTCGAACTTTAGGTTTATTTCCTGTGGATTTCGTGGGAATTCGAAAAACCTAA GATTGACGGATTCTAGTAGAAAGGCTGCAAATAGGTTTGTAATTGCTAGGTTTACGAATG AATTTGAAGACGAGGGTAGTTCGAAAGAGTCCAATGACCAAGCCAATTTCAGTAACTTTA GGGAAGATCCGATAGTGGATAAGCTTAGGACCCAGTTAGGTGTAATCCATCCACTTCCGT CACCGACCATTAATCGTAGTGTAATTAGTCTATTCGTCTTCTTCTTTTTCGTTGGTGTTG CTTTTGATAAGCTATGGACTTGGAGAAAGAGGCAAAGAGAAACAGGTGGAGATGGAAACC AACGAGGAGTAGGGCCATGGCCACAGGTTCCCACCAGCTTCTCTTTGTTCCTAGAGAAGG ATTTGCAAAGGAAAGAGTCCGTGGAGTGGGTCAACATGGTGTTAGGGAAGCTCTGGAAAG TGTATAGAGCGGGTATTGAGAATTGGCTCGTTGGTTTGTTACAGCCTGTGATTGATGACT TGAAAAAGCCTGATTATGTGCAGAGAGTTGAGATTAAGCAGTTTTCTTTAGGGGATGAGC CGTTGTCTGTCAGAAATGTTGAGAGGAAGACATCTCGCCGTGCCAATGACTTGCA phase +2 ac007980.1 55165-55999 - GTACCAAATTGGCCTTCGGTATACTGGCGGTGCACGCATGTTGTTAATGCTCTCTTTGAA ATTCGGTGTTATCCCAATAGTTGTTCCAGTTGGTGTCCGAGATTTTGACATTGATGGTGA GCTTTGGGTCAAACTAAGATTAATACCGACACAACCTTGGGTGGGAGCTGTATCATGTTC GTTTGTATCACTTCCAAAGGTCACATTTCAACTTGCAGCATTCAGATTGTTTAATCTAAT GG phase +1 ac007980.1 56283-56524 - GAATTCCCGTTCTATCAAT phase +2 ac007980.1 56766-56784 - GTTCTTGACCAAACTGCTGACTGTGGATTTGCCTCGATTATTTGTCCGACCGAAGAAAAT TGTCTTGGACTTTCAGAAAGGAAAAGCTGTTGGACCTGTTTTAGAAGACCTGAAATCAGG AGAAATGCAGGAAGGCAATAAGGATTTTGTCGGGGAACTATCTGTTACTCTTGTTGACGC CCAGAAACTTCGATACATGTTTTTTG phase +1 ac007980.1 57098-57303 - GTAAAACGGATCCATATGCAATTCTCAGATTAGGGGATCAAGTTATCCGTAGTAAAAGGA ACAGTCAAACTACTGTCATTGGGGCTCCTGGTCAGCCAATTTGGAATCAG phase 0 ac007980.1 57489-57598 - GACTTTCAATTCCTTGTTTCAAATCCTAGAGAGCAAGTATTACAAATTGAGGTCAATGAT CGTCTTGGGTTTGCTGATATGGCTATTGGTACTGGAGAG phase 0 ac007980.1 57699-57797 - GTTGATCTCAGATTTCTGCAAGATACGGTTCCTACAGACAGAATTGTGGTTTTGCGTGGT GGTTGGAGTTTGTTTGGAAAGGGATCTGCGGGTGAGATACTGCTACGGCTTACATACAAA TCATATGTGGAGGAGGAAGAAGATGACAAGACCAATGTCAAAGCCATTGATACTTCTGAC GATGAAATGTCTGATTCAGAAGAACTTGGCTCATTTGTGCGGAAGGGAAAGCTTTCGTCA GATGATATTGATCAAGAGTCATTTATGAACGTGTTGTCTGCATTGATTGTGAGTGAGGAG TTTCAAGGCATAGTTTCATCTGAAGCTAGAGACGGTATAATTGATGGTGGTGACTCACTT GGGGCACCAGTACCTTCTAAGCCAGATACTAGTAAGGGGTCTGAAAGAAACGCAGATGTA TCAAATTTGGATTTGTTAGTTGCAAATTCTGGTAGAGGAGCTGGCGGTGATGGAG phase +1 ac007980.1 57957-58431 - GATTAGCATTACTGTGGTTCGGTATTATCACGGGTATATTGGTTCTTGTTGCTATCAACA TGGAAGGCTCAAGTTTCTTCAACCCGTAGTATAGTACTATACATCTCGCTGGAGATTTCT *** GTTGCAA phase ac007980.1 58512-58638 - GTCTGGTGGTCATCTCTTCTCAACCTTAGATATGGCTTATAACGAGGTCTCAGTTTTGTA ATTTAATTTTGTATGTAAATAGCCATTAGAAGAGGGACTCTTACTAAAGGCAGGAAGGTT TGGATCTATTCTGTCCAAGCTCTCACTGTTGTGTTACTCTTTACACTTGTGGTTGATATA CAGTACATAAAAAAAGATAGAAACTTTTGTATATTTTGACCAAAAAAAAAAGAGAAAATT CTGACT ac007980.1 59042-59287 -------------------------------------------------------------------------------- 110. Arabidopsis chromosome 3 does not agree with gene prediction MPN9.7 kaos@kazusa.or.jp no evidence of expression MILQSSSSCSSFDFPSFVSRRLLCPCSNEHGLIVFSDGFTKRRRILRRVHAANSNSRFVS SGIRTDSKNIGLADSARRAARSLVVTRFSNEFEDEEASSSSQESAIQGDRNNFTNFREDP IVDKLRTQLGVIHPIPSPPISRNAIGLFAFFFFVGVICDKLWTWRKRRRQMAGDGGQRGA GPWAQVPTSFSLSLEKDLQRKESVEWVNMVLVKLWKVYRGGIENWLVGLLQPVIDDLKKP DYVQRVEIKQFSLGDEPLSVRNVERRTSRRVNDL^ QYQIGLRYTGGARMLLMLSLKFGIIPVVVPVGIRDFDIDGELWVKLRLIPSAPWVGAASW AFVSLPKIKFELAPFRLFNLMGI^ ISS^ MFLTKLLTEDLPRLFVRPKKIVLDFQKGKAVGPVSEDLKSGEMQEGNKDFVGELSVTLVN AQKLPYMFS^ GRTDPYVILRIGDQVIRSKKNSQTTVIGAPGQPIWNQ^ DFQFLVSNPREQVLQIEVNDCLGFADMAIGIGE^ VDLESLPDTVPTDRFVSLRGGWSLFGKGSTGEILLRLTYKAYVEDEEDDKRNAKAIYADA SDDEMSDSEEPSSFVQNDKIPSDDIGQESFMNVLSALILSEEFQGIVSSETGNNKVDDGE SSVSPVPSMSGADSESRPKDAGNGDVSDLEVKNAKSDRGSINNG^ GLALLWFGVITSVLVLVAINMGGSSFFNP - ATGATTCTACAGTCTTCTTCTTCTTGTTCTAGTTTCGATTTCCCTTCTTTTGTGTCACGT *** CGTCTGCTCTGTCCTTGCTCCAATGAGCACGGTCTGATTGTGTTCTCCGATGGATTCACA AAGAGGCGGAGAATTCTCCGTCGAGTTCATGCGGCGAATTCGAATTCTAGGTTTGTTTCC AGCGGAATTCGTACGGATTCCAAGAACATTGGATTAGCGGATTCGGCGAGAAGAGCTGCC AGAAGTCTTGTGGTTACTCGGTTTTCGAATGAATTTGAGGATGAAGAAGCATCTTCATCT TCACAGGAGTCTGCAATTCAAGGTGATAGAAACAATTTCACTAACTTTAGAGAAGATCCT ATAGTGGATAAGCTCAGGACTCAGCTAGGTGTAATCCACCCAATCCCGTCTCCACCGATT AGTCGTAATGCAATTGGTCTATTCGCATTCTTCTTCTTTGTTGGTGTTATTTGTGATAAG CTATGGACTTGGAGAAAGAGGCGGAGACAAATGGCTGGTGATGGAGGCCAAAGAGGAGCC GGGCCATGGGCACAGGTTCCCACCAGTTTCTCGCTGTCCCTTGAGAAGGATTTGCAAAGG AAAGAGTCGGTGGAGTGGGTGAACATGGTGTTGGTTAAGCTCTGGAAAGTTTATAGAGGT GGGATTGAGAATTGGCTTGTTGGATTGTTGCAGCCTGTGATTGATGATTTGAAGAAGCCT GATTATGTGCAGAGAGTTGAAATTAAGCAATTCTCTCTTGGGGATGAGCCTTTGTCTGTT AGAAATGTTGAGAGGAGGACATCTCGCCGTGTTAATGACTTGCA phase +2 ab025631.1 (22749-21926) - GTACCAGATTGGTCTTCGGTATACTGGTGGTGCTCGGATGTTGTTAATGCTCTCTTTAAA ATTTGGTATCATCCCAGTAGTTGTGCCAGTTGGTATTCGGGATTTTGACATTGACGGTGA ACTATGGGTTAAATTAAGATTGATTCCGTCAGCGCCTTGGGTTGGAGCAGCATCATGGGC GTTTGTTTCACTTCCAAAGATCAAATTTGAGCTTGCACCATTCCGATTGTTTAATCTAAT GGGTATTA phase +1 ab025631.1 (21662-21415) - TCTCCTCAAT phase +2 (21270-21261) - GTTCTTGACCAAACTACTGACAGAAGATTTGCCTCGATTATTTGTACGCCCAAAGAAAAT TGTCTTGGATTTCCAGAAGGGAAAAGCTGTTGGGCCTGTTTCAGAAGACTTAAAATCTGG AGAAATGCAGGAAGGGAACAAGGATTTTGTAGGGGAACTGTCTGTTACTCTTGTAAATGC CCAGAAACTTCCATACATGTTCTCTG phase +1 ab025631.1 (21161-20956) - GTAGAACGGATCCATATGTTATTTTACGAATAGGTGATCAAGTTATCCGCAGTAAGAAGA ACAGTCAAACTACTGTGATTGGGGCTCCTGGTCAGCCAATCTGGAACCAG phase 0 ab025631.1 (20735-20626) - GACTTCCAATTCCTTGTGTCAAATCCTAGAGAGCAAGTATTACAAATTGAAGTCAACGAC TGTCTTGGATTTGCCGATATGGCTATTGGTATCGGAGAG phase 0 ab025631.1 (20513-20415) - GTTGACCTTGAATCACTGCCAGATACGGTTCCTACAGACAGATTTGTTAGTTTACGAGGC GGTTGGAGTTTGTTCGGAAAGGGATCTACTGGAGAAATACTACTCCGGCTTACATACAAA GCATACGTGGAGGATGAAGAAGATGATAAACGCAACGCAAAAGCCATATATGCAGATGCT TCCGATGATGAAATGTCTGATTCGGAAGAACCTAGCTCATTTGTGCAGAATGACAAGATT CCTTCAGATGATATTGGTCAAGAGTCATTTATGAACGTGTTGTCTGCATTGATTTTGAGC GAGGAATTTCAAGGCATAGTTTCATCAGAAACTGGGAACAATAAAGTTGATGATGGTGAA TCAAGCGTGTCACCTGTTCCTTCAATGTCTGGGGCGGACTCAGAATCTCGACCAAAAGAT GCTGGCAATGGGGACGTATCAGATTTGGAAGTGAAAAATGCGAAATCTGATAGAGGTTCT ATTAATAATGGAG phase +1 ab025631.1 (19773-19281) - GATTAGCATTATTGTGGTTCGGTGTAATCACTTCTGTACTGGTGCTCGTTGCTATCAACA TGGGCGGCTCAAGTTTCTTCAACCCGTGA *** ab025631.1 (19201-19113) -------------------------------------------------------------------------------- 111. Arabidopsis chromosome 1 does not agree with gene prediction F22G10.28 at@tigr.org cDNA/est evidence MESSLIHHIIIVLLLLWFISSLNRSHAFFYFLALIYLYL^ VHERYVMRLKRKLQFEERKQANQRR^ VLSDSESVRWMNYAVEKIWPICMEQIASQKILGPIIPWFLEKYRPWTA^ KKAVIQHLYMGRNPPLLTDIRVLRQSTGDDHL^ VLELGMNFLAADDMSAILAVKLRKRLGFGMWTKLHLTGMHVEGK^ VLIGVKFLRRWPFLGRLRVCFAEPPYFQMTVKPIFTHGLDVAVLPGIAGWL^ DKLLSIAFEQTLVQ^ PNMLVVDMEKFVSPTS^ ENWFFVDEKEPVAHVLVEVFEASDLKPSDLN^ GLADPYVKGKLGAYRFKTKIQKKTLSPKWHEEFKIPIFTWDSPSILNIEVGDKDRFVDDTL^ GECSVNIEEFRGGQRNDMWLSLQNIKMGRLHLAITVIEDNAK^ SSDDPLKKAKLNKEDIQTSFASDTTNLGSFSSDKSPSVVDNFEPIKIDGQEETAIW VQKPGAEVSQIWEPRKGKSRRLDSQIQRTPNDESLSNGSSSTDDNQEGSKNPMKSVGRGL RKIGSMFHRNVKKEEFLIGSIEEESQSQSPRINLKAVNQKDVGLNFIVDDNLSGPLSGKS LDGESLDAEENSGKGHMKDVAKSFLKQAEKSAKQIKHAFSRKGSMKPRDGHKEIVPESDS GTDSESSDDDDAFTCVKNLATEPGKLTRDGNIERTGDDDHVDSTTLATAKEDSSGDILED STDVEAKEEKLKEAAESETRDMDTAMNIKTEDEKGDTLKNIEEGEEKESSSK - GAATCAATTCAGATGATTCTGGAATTTTGATTAAAAGACTTAAATCTTTGAGAATTTTGT CGGCTCTTCTCTTCTGGGTTTGGTTCTGATCATAGAAAAGGATACGATGGAGTCTTCTTT *** AATTCATCATATCATCATTGTGTTGCTGTTACTCTGGTTCATCTCTTCCTTGAATCGATC CCACGCCTTTTTCTATTTCCTCGCTCTCATTTATCTCTACCTG phase 0 ac024260.4 (75735-75513) - GTTCACGAACGGTATGTGATGAGATTGAAGAGAAAATTGCAGTTCGAAGAGAGGAAGCAA GCAAATCAGAGAAGG phase 0 ac024260.4 (75423-75349) - GTTCTATCTGATTCTGAATCTGTGAGATGGATGAATTATGCTGTGGAGAAGATATGGCCA ATATGCATGGAACAGATAGCGTCTCAGAAGATTCTGGGTCCAATCATACCTTGGTTCTTG GAAAAATATAGACCTTGGACAGCG phase 0 ac024260.4 (74981-74838) - AAAAAAGCTGTGATACAGCACCTTTACATGGGAAGAAACCCACCTCTGTTGACTGATATT AGGGTCCTTCGTCAATCTACGGGTGATGATCACTTG phase 0 ac024260.4 (74739-74644) - GTACTGGAACTTGGTATGAATTTTCTCGCAGCAGATGATATGAGTGCAATACTTGCTGTG AAATTAAGGAAAAGGCTTGGTTTTGGGATGTGGACAAAGTTGCATTTGACAGGAATGCAC GTGGAAGGAAAG phase 0 ac024260.4 (74557-74426) - GTGTTGATCGGAGTGAAGTTCCTTCGTCGGTGGCCTTTCTTGGGGCGTTTACGTGTGTGT TTTGCAGAGCCTCCATATTTCCAGATGACTGTTAAACCAATCTTCACTCATGGGCTTGAT GTTGCAGTACTCCCAGGTATCGCAGGATGGCTA phase 0 ac024260.4 (74348-74196) - GATAAACTTCTTTCTATAGCATTTGAACAGACCCTTGTTCAG phase 0 ac024260.4 (74081-74040) - CCAAATATGCTTGTTGTTGACATGGAGAAATTTGTTAGCCCAACGTCAG phase +1 ac024260.4 (73907-73859) - AAAATTGGTTCTTTGTTGATGAGAAAGAACCGGTTGCACACGTCTTAGTTGAAGTCTTTG AAGCATCAGATCTTAAACCATCTGATCTAAATG phase +1 ac024260.4 (73739-73647) - GTTTGGCTGATCCTTATGTGAAAGGGAAACTTGGTGCTTACCGATTCAAAACCAAGATAC AGAAGAAAACATTGTCCCCGAAATGGCACGAAGAGTTTAAGATACCAATCTTTACATGGG ATTCTCCTAGTATACTTAACATTGAAGTTGGAGACAAAGACCGATTTGTGGATGATACCC TTGG phase +2 ac024260.4 (73571-73388) - TGAATGTTCAGTGAATATTGAAGAGTTTAGAGGCGGCCAAAGAAACGATATGTGGTTGTC TCTTCAGAACATCAAAATGGGAAGGCTTCATCTTGCTATAACAGTAATTGAGGACAATGC GAAG phase 0 ac024260.4 (73304-73181) - TCGAGTGATGATCCCTTAAAAAAAGCGAAACTAAACAAGGAAGACATACAGACTTCTTTT GCTTCTGATACTACAAATTTAGGCTCTTTCTCGTCGGACAAATCTCCAAGTGTTGTGGAT AACTTTGAGCCAATAAAAATTGACGGGCAAGAAGAGACTGCAATATGGGTTCAAAAACCG GGAGCAGAAGTATCACAGATTTGGGAACCAAGAAAAGGTAAGAGTAGACGTCTTGATAGC CAAATACAAAGAACCCCTAATGATGAATCATTGAGCAATGGAAGCAGCAGCACTGACGAC AATCAAGAGGGATCAAAGAATCCAATGAAGTCTGTTGGTAGAGGATTGAGGAAAATCGGG TCAATGTTTCACAGGAATGTCAAAAAGGAAGAATTTTTAATAGGAAGCATTGAAGAAGAG TCACAGTCTCAGTCTCCTCGGATCAATCTGAAGGCAGTAAACCAAAAGGATGTTGGACTT AACTTCATCGTTGATGACAATCTCTCGGGTCCACTTTCAGGCAAGAGTTTAGATGGTGAG AGTTTGGATGCAGAGGAAAATTCAGGTAAAGGCCATATGAAGGATGTGGCAAAGAGTTTT CTGAAACAAGCTGAGAAATCTGCAAAACAGATAAAGCATGCGTTTTCCCGTAAAGGATCC ATGAAACCAAGAGATGGGCATAAAGAAATCGTTCCTGAATCTGATTCTGGAACTGATTCT GAATCTTCTGATGATGATGATGCGTTTACCTGTGTAAAGAACCTGGCAACAGAACCAGGA AAACTTACACGCGATGGGAATATTGAAAGAACAGGAGATGATGATCATGTAGATTCAACA ACATTAGCAACCGCTAAGGAAGATTCAAGTGGTGATATATTAGAGGATTCGACAGATGTT GAAGCTAAAGAGGAGAAATTAAAGGAAGCAGCAGAGTCAGAAACTAGAGATATGGACACC GCCATGAACATCAAAACTGAAGATGAGAAAGGAGACACGCTTAAAAATATCGAAGAAGGG GAAGAAAAGGAATCATCTTCAAAGTAAAAACGTATATCATATGCACATTAACGTTCATGT *** ATATGTTTCTGTGTTTACTGAATTCGAAACCTGCGAATCAAATGAAGGTTCTTGAGCTTG TTGTATAAACTAATTTTTCTTTTCATCATCTGTTTTTTTTTCCCT ac024260.4 (73104-71920) -------------------------------------------------------------------------------- 112. Arabidopsis chromosome 3 cDNA/est evidence for antisense locus ab023038.1 30962-34820 No evidence for expression of sense locus does not agree with gene prediction MIE1.9 kaos@kazusa.or.jp agrees with gene prediction nm_112319 http://www.ncbi.nlm.nih.gov MECSVIHHVVIVLLLLWVLSYLNRSHAVFYVLSLVYLYL^ VHERYVMRLRKKLQFEERKQANQRR^ VLSDSESVRWLNHAVERIWPICMEQIASQKILRPIIPWFLDKYRPWTA^ KKVVIQHLYLGRNPPLLTDIRVLRQSTGDDHL^ VLELGMNFLTADDMSAILAVKLRKRLGFGMWTKLHLTGMHVEGK^ VLIGVKFLRRWPFLGRLRVCFAEPPYFQMTVKPITTHGLDVAVLPGIAGWL^ DKLLSVAFEQTLVE^ PNMLVVDMEKFVSPESG^ DNWFFVDEKEPVAHALVEVVEACDVKPSDLN^ GLADPYVKGQLGAYRFKTKILWKTLAPKWQEEFKIPICTWDSANILNIEVQDKDRFSDDS LGDCSVNIAEFRGGQRNDMWLPLQNIKMGRLHLAITVLEDEAK^ LNDDPFEGVTICKEDMWASFASDVTNKGSFSSVVSDKSPRVPDNMEPINIEGQEETGIWV HQPGTEVSQIWEPRKGKSRCLDNKIQCAGSVRSTASTSPNNESSSTDKNQEGKSEMKSVG WGLKKIGLVFHKNGKKEECHHTGSIEEDIRSPRINLKALNQKDVGVKFIVEDRLSGPLTG RSPKGESFDSEDSQHKRHMKDVAKSILKHAEKSARHLKHAFSHKGSRKSRDDECSTVSEQ DSECLSETSDDKSAFSNVQDLGTLRRAKLEGKTVKAGEDDNVNTSANSKDDSKNKETKKN LANLETTYSDARNSFAGAEKVTTPKNRKGIIGK - ATGGAGTGTTCGGTAATCCATCATGTGGTGATTGTGTTACTGTTACTTTGGGTTCTATCT *** TACTTGAATCGATCACACGCGGTTTTCTATGTCCTCTCTCTCGTTTATCTTTACCTG phase 0 ab023038.1 (35701-35585) - GTTCATGAACGCTATGTGATGAGATTGAGGAAGAAATTGCAGTTTGAAGAGAGGAAGCAA GCTAACCAGAGACGT phase 0 ab023038.1 (35484-35410) - GTTCTATCTGATTCTGAATCGGTGCGGTGGTTGAATCATGCCGTGGAGAGGATATGGCCT ATTTGTATGGAACAGATTGCTTCTCAGAAGATTCTTCGTCCGATCATACCTTGGTTCTTG GACAAGTATAGACCTTGGACTGCG phase 0 ab023038.1 (35245-35102) - AAAAAAGTTGTGATACAACACCTTTATTTGGGAAGAAACCCTCCTTTGTTGACAGATATT AGGGTTCTACGGCAATCTACGGGTGATGATCACTTG phase 0 ab023038.1 (34958-34863) - GTACTGGAACTTGGAATGAATTTCCTCACAGCAGATGATATGAGCGCAATACTCGCTGTG AAGTTAAGAAAAAGACTTGGGTTTGGAATGTGGACAAAGTTGCATTTGACAGGAATGCAT GTTGAAGGAAAG phase 0 ab023038.1 (34786-34655) - GTGTTGATTGGAGTGAAGTTCCTTCGTCGATGGCCTTTTCTCGGGCGTTTACGAGTGTGT TTTGCAGAGCCACCTTATTTCCAAATGACTGTTAAACCAATTACCACTCATGGACTTGAT GTTGCTGTGCTTCCAGGGATTGCAGGATGGCTA phase 0 ab023038.1 (34567-34415) - GACAAACTTTTGTCTGTTGCATTTGAGCAGACTCTTGTTGAG phase 0 ab023038.1 (34325-34284) - CCAAATATGCTGGTAGTTGATATGGAGAAATTTGTTAGCCCAGAGTCAGGAG phase +1 ab023038.1 (34162-34111) - ATAATTGGTTCTTTGTTGATGAGAAAGAACCAGTAGCACACGCTCTTGTTGAAGTCGTTG AAGCATGTGATGTTAAACCATCAGATCTAAACG phase +1 ab023038.1 (33980-33888) - GTTTAGCTGATCCTTACGTGAAAGGGCAGCTTGGCGCTTACAGATTCAAAACCAAGATAC TATGGAAAACCTTGGCTCCCAAATGGCAAGAAGAGTTCAAGATACCAATCTGCACATGGG ACTCCGCAAATATTCTTAACATTGAAGTTCAAGACAAAGACCGATTTAGCGATGACAGTC TTGGCGACTGTTCAGTGAACATTGCAGAGTTTCGAGGCGGCCAAAGAAATGATATGTGGT TGCCTCTTCAGAACATTAAAATGGGGAGATTGCACCTTGCTATAACCGTACTTGAGGACG AGGCAAAG phase 0 ab023038.1 (33799-33492) - TTGAACGATGATCCGTTTGAAGGAGTGACAATATGTAAGGAAGACATGTGGGCTTCTTTT GCTTCCGACGTTACAAATAAAGGTTCCTTCTCATCAGTGGTATCTGACAAGTCTCCAAGG GTTCCTGATAATATGGAACCAATAAACATCGAAGGACAAGAAGAGACTGGGATTTGGGTA CATCAACCAGGAACTGAAGTCTCACAGATTTGGGAACCAAGAAAAGGCAAGAGTCGATGC CTTGATAACAAAATACAGTGCGCTGGCAGTGTCCGTTCCACTGCATCTACGTCGCCCAAC AATGAAAGCAGCAGCACTGATAAAAATCAGGAAGGGAAGAGCGAGATGAAGTCTGTTGGT TGGGGGCTGAAGAAAATCGGTTTAGTGTTCCATAAGAATGGAAAAAAGGAAGAATGTCAT CATACAGGGAGCATTGAAGAGGATATCAGGTCTCCTCGGATTAATTTGAAGGCGTTAAAT CAAAAGGATGTTGGAGTTAAGTTCATCGTTGAAGACAGGCTATCGGGGCCTCTCACAGGA AGAAGTCCAAAAGGTGAGAGCTTTGATTCTGAAGACAGTCAGCACAAGAGACACATGAAG GATGTTGCAAAAAGCATTCTAAAACATGCTGAAAAGTCTGCAAGACACCTTAAGCATGCT TTTTCGCATAAAGGATCAAGGAAATCAAGAGATGACGAGTGTTCAACTGTGTCAGAGCAA GACTCTGAATGTCTAAGTGAAACTTCTGATGACAAATCTGCATTTAGCAATGTGCAGGAC CTGGGGACACTAAGAAGAGCAAAACTTGAAGGAAAGACTGTCAAGGCAGGTGAAGATGAT AATGTAAATACATCCGCGAACTCCAAAGACGATTCGAAAAACAAGGAAACAAAGAAAAAT TTAGCAAACTTGGAAACTACATATAGTGATGCCAGGAACTCTTTTGCTGGAGCCGAGAAA GTCACCACCCCCAAGAATCGAAAAGGAATCATAGGTAAATAA *** ab023038.1 (33409-32408) -------------------------------------------------------------------------------- 113. Oryza chromosome 7 cDNA/est evidence agrees with gene prediction P0492E07.115 http://rgp.dna.affrc.go.jp MGLISGMVMGMVVGVALMAGWSRVMQRRSRKRIAK^ AADIKVLGSLGRDDLKKLCGDNFPEWISFPQYEQ^ VKWLNKHLSKLWPFVDQ^ AATAVVKESVEPLLDDYRPPGIKSLKFSKFSLGTVSPKIE^ GIRIQNIQPGQIIMDIDLRWGGDPSIILAVDAVVASLPIQLKDLQVYTIVRVVFQLSEEI PCISAVVVALLAE^ PEPKIQYTLKAIGGSLTAVPGLSDMID^ DTVNSIVSDMLKWPHRLVVPLGVNVDT^ SELELKPQGRLTVTVVKATSLKNKELIGKSDPYVILYVRPMFKVKTKVIDDNLNPEWNET FPLIVEDKETQSVIFE^ VYDEDRLQQDKKLGVAKLAVNSLQPEATSEITLKLQQSLDSLKIKDTKDRGTLHLQ^ VTYHPFSKEEQMEALESEKRAIEERKRLKEAGVIGSTMDALGGAASLVGSGVGLVGTGIV GGVGLVGSGIGAGVGLVGSGVGLVGSGIGAVGSGLGKAGKFMGKTVAGPFSMSRKNGSSS TAPQAEQPSA - TCGATTCGTTGATGCTTCCCTTGGGGCATTAACTGCGCACTAATCCCCGTAATTAATCCC CTCTCCCAAGCCCCAATCCGTCGCAATCCTCCGCATTCCCCACTCCCAAGCCACAATTGC AAACCGCCAACGCAAGCCAGAGAGGCGTAACCCTCCCCCTCGTCTCCTCCGCTGCGAAGC CGCAGATCTCGAGCTGCCATTCGATTGATGAGGTAAGGGGGGTGCCGGCGCGAGAAGCGA GGTTGGCTGGCCGGCGGAGGGCGGGCTGTCGGTCGCGGGTGCGCCAGGATGGGGCTGATC *** TCGGGGATGGTGATGGGGATGGTGGTCGGCGTCGCGCTTATGGCCGGGTGGAGCCGTGTG ATGCAGCGGCGCAGCAGGAAGCGCATCGCTAAG phase 0 ap004305.3 68486-68878 - GCTGCGGATATCAAGGTCCTTGGGTCTCTCGGTAGGGACGATCTCAAGAAGCTGTGCGGC GACAATTTCCCCGAGTGGATATCCTTCCCGCAGTATGAGCAG phase 0 ap004305.3 69021-69122 - GTGAAATGGCTGAACAAGCATCTCAGCAAACTCTGGCCTTTCGTTGATCAA phase 0 ap004305.3 70945-70995 - GCTGCCACTGCAGTAGTCAAGGAATCTGTTGAGCCACTGCTAGATGATTATCGACCTCCA GGAATAAAATCTCTGAAGTTCAGCAAATTCTCTCTTGGAACTGTTTCACCAAAGATAGAAG phase +1 ap004305.3 71823-71943 - GTATTCGCATTCAAAATATTCAGCCAGGCCAAATCATAATGGATATAGATCTTCGTTGGG GTGGTGATCCAAGCATAATCCTTGCTGTTGATGCTGTTGTTGCATCACTTCCTATTCAG phase ap004305.3 73229-73347 - CTCAAAGATCTTCAAGTCTACACCATTGTCCGTGTTGTATTTCAACTATCAGAGGAGATC CCTTGCATCTCTGCTGTTGTTGTTGCTCTTCTTGCAGAG phase 0 ap004305.3 73445-73543 - CCAGAGCCGAAAATACAATACACTTTGAAGGCTATTGGAGGAAGTCTGACCGCTGTTCCA GGACTCTCCGACATGATTGAT phase 0 ap004305.3 74154-74234 - GACACTGTCAATTCAATTGTTTCTGACATGCTCAAGTGGCCACACAGGCTTGTTGTTCCA CTTGGTGTCAATGTTGATACAAG phase +2 ap004305.3 74315-74397 - TGAGCTGGAGCTTAAACCTCAGGGAAGACTTACTGTTACTGTAGTAAAAGCAACTTCATT GAAGAATAAGGAGTTGATTGGTAAATCAGATCCATATGTGATACTATATGTGCGTCCAAT GTTCAAGGTCAAAACAAAAGTCATAGATGATAACCTAAATCCTGAATGGAATGAAACATT CCCTCTGATTGTTGAAGACAAAGAAACCCAGTCTGTCATTTTTGAG phase 0 ap004305.3 75647-75872 - GTATATGATGAAGACAGACTTCAGCAAGACAAAAAGCTTGGTGTAGCTAAACTAGCAGTG AACAGTCTTCAACCTGAGGCTACCAGTGAAATCACTTTGAAACTTCAGCAATCACTAGAT TCTCTTAAAATTAAGGACACCAAGGATAGAGGAACATTACATCTTCAG phase 0 ap004305.3 78742-78909 - GTCACATATCACCCATTTTCAAAGGAAGAACAGATGGAAGCCCTAGAGTCTGAAAAGAGA GCTATCGAGGAGAGAAAGCGACTCAAGGAGGCTGGGGTTATTGGTAGTACAATGGATGCT CTTGGTGGTGCTGCTTCACTAGTTGGTTCTGGTGTTGGACTTGTGGGCACTGGCATTGTC GGCGGGGTTGGACTTGTTGGATCAGGAATTGGTGCTGGTGTTGGGCTTGTTGGTTCGGGT GTTGGGCTTGTTGGTTCGGGTATTGGCGCTGTCGGCAGCGGCCTCGGTAAAGCTGGGAAA TTCATGGGCAAGACTGTGGCCGGGCCTTTCAGTATGTCCCGGAAGAACGGTAGCAGCTCA ACTGCTCCCCAGGCTGAACAACCTTCTGCGTGACTTGATGTACAGTGATTGCAATGGACA *** TCGCATGTTCAGTTGCGTGTTAATTCTGTTTGATATAAACTTGTGATACCTAGAATTATA GGGTTGCATACCATGCATTTCAGTGTTCTGGCACCGTCGGTGTCAATTATATGACCATCT GTTGCTTTTTTTTCTTCGTTCTGTTTTTACCTGAAGATAAATAGCAAGATTAAACTGTAA ATTGGCAAGCTAGACATATCCAGATCCTTTCTGGACAATGCAATGGTATTGAAATTTGTC GTTATTACCGTCTTGAAAAAAGTTACTATA ap004305.3 80878-81567 -------------------------------------------------------------------------------- 114. Oryza chromosome 3 no evidence of expression MGFISGVVMGMIIGVALIAGWSRAMARRAAKRSAK^ AADVNALASLDREDVKKICGENLPEWVSFPEYEQ^ VKWLNKQLSKLWPFVEE^ AATMVIRDSVEPILDDYRPAGISSLKFSKLSLGTVPPKIE^ GIRIQSFKKGQITMDVDFRWGGDPNIVLAVDTLVASLPIQ^ FKNLQVYTIIRVVFQLCDEIPCISAVVVALLAE^ PKPRIDYILKAVGGSLTAMPGLSDMID^ DTVASLIADMLQWPHRIVVPLGGVD^ LFCSDLELKPHGKLTVTVVRAESLKNKELIGKSDPYVVLYIRPMFKEKTSVIDDNLNPEW NETFSLIAEDKETQHLILQ^ VFDEDKLKQDKRLGIAKLPLNDLEMESVQEINLQLLSSLDTTKVKDKKDRGVLTIK^ VLYHPFTKAEALEALELEKKTVEERRKTKEETAAVSGAADAASGVTSTVTPAAGAGVAAG AAAPGAGATAAGSGVGLVGTGIGAVGSGIGAFGTGLSKAGKFVGRTVTGPFSSARRSASS VPTIDE - ATGGGGTTCATATCGGGGGTGGTGATGGGAATGATCATCGGCGTCGCCCTCATCGCCGGCTGGTCGCGCG *** CGATGGCTCGCCGCGCCGCCAAACGCAGTGCCAAG phase 0 ac134235.2 (149526-149422) atypical gc donor - GCTGCAGATGTCAATGCACTTGCATCTCTCGACCGCGAAGACGTGAAGAAAATATGTGGAGAAAATCTCC CAGAATGGGTGTCATTCCCAGAGTATGAACAG phase 0 ac134235.2 (148905-148804) - GTTAAATGGCTCAACAAACAATTGAGCAAGCTTTGGCCTTTTGTTGAAGAG phase 0 ac134235.2 (148644-148594) - GCAGCAACTATGGTCATCAGGGATTCGGTGGAGCCTATACTTGATGATTACAGGCCGGCAGGGATATCCT CACTGAAGTTCAGCAAACTCTCCCTGGGGACTGTTCCTCCGAAAATTGAAG phase +1 ac134235.2 (148440-148320) - GCATTCGGATTCAGAGCTTCAAGAAAGGGCAAATTACAATGGACGTCGACTTTCGTTGGGGCGGGGATCC TAATATTGTCCTTGCAGTTGACACTCTAGTTGCTTCACTTCCCATTCAG phase 0 ac134235.2 (148229-148111) - TTCAAGAACCTTCAGGTTTACACCATCATCCGTGTCGTCTTCCAATTGTGTGATGAAATACCTTGCATCT CTGCTGTTGTTGTTGCTCTTCTGGCAGAG phase 0 ac134235.2 (147963-147865) - CCAAAACCAAGGATCGACTACATACTGAAGGCTGTCGGAGGAAGCCTGACAGCAATGCCTGGTCTTTCAG ATATGATCGAC phase 0 ac134235.2 (147752-147672) - GACACCGTGGCATCTTTGATCGCTGACATGCTCCAATGGCCACACAGAATCGTCGTCCCACTGGGCGGAG TCGAC phase 0 ac134235.2 (147573-147499) - CTCTTCTGCAGTGACCTTGAGCTGAAGCCGCATGGGAAGCTGACGGTGACCGTGGTGCGCGCGGAGTCGC TCAAGAACAAGGAGCTGATCGGCAAGTCCGACCCGTACGTGGTGCTGTACATCCGCCCAATGTTCAAGGA GAAGACCAGCGTCATCGACGACAACCTCAACCCCGAGTGGAACGAGACGTTCTCGCTCATCGCCGAGGAC AAGGAGACGCAGCATCTGATCCTTCAG phase 0 ac134235.2 (147357-147121) - GTGTTCGACGAGGACAAGCTGAAGCAAGACAAGAGGCTGGGCATAGCCAAGCTGCCCCTGAACGACCTGG AGATGGAGTCCGTGCAGGAGATCAACCTGCAGCTGCTGTCGTCGCTGGACACGACCAAGGTCAAGGACAA GAAGGACAGGGGCGTGCTCACCATCAAG phase 0 ac134235.2 (147035-146868) - GTGCTGTACCACCCGTTCACCAAGGCGGAGGCGCTCGAGGCGCTGGAGCTGGAGAAGAAGACGGTGGAGG AGCGGCGGAAGACCAAGGAGGAGACGGCGGCCGTCAGCGGCGCCGCGGACGCGGCGAGCGGCGTGACGTC CACGGTGACCCCCGCGGCTGGGGCGGGCGTCGCTGCGGGAGCCGCCGCGCCCGGAGCGGGCGCCACCGCC GCCGGCTCCGGCGTGGGGCTGGTCGGCACGGGCATCGGCGCCGTGGGCAGCGGCATCGGAGCGTTCGGCA CCGGCCTCAGCAAGGCTGGCAAGTTCGTCGGCCGGACCGTCACTGGCCCGTTCAGCAGCGCCAGGCGCAG CGCCAGCAGCGTGCCCACCATTGACGAATAA *** ac134235.2 (146777-146397) -------------------------------------------------------------------------------- 115. Oryza chromosome 2 cDNA/est evidence no gene prediction http://rgp.dna.affrc.go.jp MLPPSAGTPLPPPSLAAASTSSCFLPSLLPIRRRRWPTPKATATAAFPPRRPAPLSANNL PLHTPGVSETTSTSTSSTTFASGTFRGAGGEDPLVSKLRTQLGVIHPLPAPPVNRSVLGL FALFFFVGAAFDKLWTLRKRRRAEREVKVNGTWPQVPTSSFSLFLEEKDLQRKESVEWVN MVLGKLWKVYRPGIENWIVGLLQPVIDNLHKPDYVNRVEIRQFYLGEEPLSVRNVERRTS RRANDLQ^ YQIGLRYTGGARMALALSLKFSAVPVVVPVWVRDFDIDGELWVKLRLIPTEPWVGAVSWA FVSLPKIKFELSLFRLFNLM^ AIPVLS^ MFLTKLLTEDLPRLFVRPKKIVLDFQQGRSMGPVAGDVASDVIQNVASGILQDVASDVIQ DGNKDFVGELSVTLVDARKLSFVLF^ GKTDPYVVMILGDQEIKSKKNSQTTVIGQPGEPIWNQ^ DFHMLVANPRKQKLCIQVKDSVGLTDVTIGTGE^ VELGSLKDTVPTDKIVTLYGGWGLLGKRSKGEVLLRLTYKAYVEDEEDEGVKNEFAAGYV SDEDVLDYVQDSTSKQSDMDGKERETFMDLLAALLVSEEFQGIVSSSEPGSLRDSEQAAK SRDGENAAAAADTGTVSNSST^ DTALVWLAAITSVMVLVSSNLGGSGYFNP - ATGCTTCCCCCCTCCGCCGGCACTCCGCTGCCGCCGCCCTCCCTCGCCGCCGCTAGCACC *** TCTTCCTGCTTCCTCCCCTCCCTCCTCCCTATCCGCCGCCGCCGATGGCCCACCCCCAAA GCCACCGCCACCGCCGCCTTTCCGCCCAGGCGCCCGGCCCCCCTCTCCGCCAACAACCTC CCGCTCCACACCCCCGGCGTCTCGGAGACCACCTCCACCTCCACCTCCTCCACCACCTTC GCTTCCGGAACCTTCCGCGGCGCCGGGGGAGAGGACCCCCTCGTCTCCAAGCTCCGGACC CAGCTGGGCGTCATCCACCCGCTCCCGGCGCCGCCCGTCAACCGCTCCGTCCTCGGCCTT TTCGCCCTCTTCTTCTTCGTCGGCGCCGCCTTCGACAAGCTCTGGACCCTGCGCAAGCGC CGCCGCGCCGAGCGCGAGGTCAAGGTCAACGGCACGTGGCCGCAGGTGCCCACCTCCAGC TTCTCCCTCTTCCTCGAGGAGAAGGACCTGCAGCGCAAGGAGTCCGTCGAGTGGGTCAAC ATGGTGCTCGGCAAGCTCTGGAAGGTCTACCGCCCTGGCATCGAGAACTGGATCGTCGGC TTGCTCCAGCCCGTCATCGACAACCTCCACAAGCCCGATTACGTCAACCGCGTCGAGATC AGGCAGTTCTACCTCGGCGAGGAGCCCCTCTCCGTTAGGAACGTCGAGCGCCGCACCTCA CGCCGGGCCAACGACCTCCA phase +2 ap004043.2 (26523-26276) - GTACCAAATTGGCCTCCGTTATACTGGTGGTGCACGCATGGCATTGGCCCTCTCCTTAAA GTTTAGTGCCGTACCTGTCGTTGTGCCAGTCTGGGTTCGAGATTTCGATATCGATGGGGA ATTGTGGGTTAAACTAAGGCTTATACCGACAGAACCTTGGGTGGGAGCTGTATCTTGGGC ATTTGTATCGCTCCCAAAGATTAAATTTGAGCTGTCTCTGTTCCGGCTTTTCAATCTTAT GG phase +1 ap004043.2 (25689-25448) - CAATTCCTGTTCTGTCAAT phase +2 ap004043.2 (24712-24694) - GTTTCTCACGAAACTTCTAACAGAAGATTTGCCACGTCTCTTTGTGCGGCCCAAGAAGAT TGTCCTTGATTTTCAGCAGGGAAGATCTATGGGACCTGTTGCAGGAGATGTTGCAAGTGA CGTAATCCAAAATGTTGCAAGTGGCATACTTCAAGATGTTGCAAGTGATGTAATTCAAGA TGGGAATAAGGACTTCGTTGGAGAACTATCAGTGACATTAGTTGATGCCAGGAAGCTTAG CTTTGTCTTATTCG phase +1 ap004043.2 (24130-23877) - GGAAGACTGATCCATATGTTGTCATGATTCTTGGTGATCAAGAAATAAAGAGCAAGAAGA ATAGTCAAACAACTGTAATTGGGCAACCAGGCGAACCAATCTGGAATCAA phase 0 ap004043.2 (23609-23500) - GACTTTCATATGCTAGTTGCAAACCCTCGCAAACAGAAGTTGTGCATTCAAGTAAAGGAT TCAGTTGGTCTAACCGATGTCACTATTGGCACTGGAGAG phase 0 ap004043.2 (23401-23303) - GTTGAGTTAGGATCACTTAAAGACACAGTACCTACAGACAAAATTGTAACTTTATATGGA GGATGGGGCTTACTTGGGAAACGGTCAAAAGGGGAAGTACTCCTTCGCCTCACATACAAA GCATATGTCGAGGACGAGGAAGATGAAGGGGTAAAAAATGAGTTTGCTGCGGGCTATGTT TCAGACGAGGATGTGCTAGATTATGTCCAAGACAGTACAAGTAAGCAAAGTGACATGGAT GGTAAAGAGAGAGAGACCTTCATGGATCTGCTGGCCGCGCTGCTTGTCAGCGAGGAATTT CAAGGCATTGTGTCGTCGTCTGAACCCGGAAGCTTGAGAGATAGTGAGCAGGCTGCTAAA TCCAGAGATGGTGAAAATGCTGCAGCAGCTGCTGATACAGGGACTGTATCCAATAGCTCC ACAG phase +1 ap004043.2 (23068-22645) - ATACTGCTCTAGTGTGGCTTGCTGCCATAACAAGTGTGATGGTGCTGGTCTCATCCAACC TTGGTGGTTCAGGCTATTTCAACCCTTGAAGAGTTGATGCATGAAGAATCTGATCTGACT *** GGAGTATTTGGACGATCCATCTGTCTGAATCTGATCATCCGCAGCTAGTAGCAGAGGTCG TTTTGTTTTGATTTTTTTTAACTTTATTTTTGCCGACAAGTGTATATTCCATTCCCATGT ATCTAATGTTGCAGAGGAATCAAAGAATGGCTTGGCTTTTGGCGGCTGTCTCTCCTCCCT TTTTCTATTTCATACGATTGACATGATGTAGCATATCCTTTTTGTGCAACCATCCACGCA CATGATTTAATTTGTGTGAATGGGAAATTTGGAGTTGCGTTCATCTCTCCTCTTGG ap004043.2 (22526-22111) -------------------------------------------------------------------------------- 116. Oryza chromosome 1 cDNA/est evidence does not agree with gene prediction B1066G12.11 http://rgp.dna.affrc.go.jp MDAGELPIVYHIGIVLAALWAAGSLGFRHSVLFLLAFLYLYM^ VNARCAMKLRKRIQHEEMKSAYQRR^ LLSDAESVRWLNYAIKKMWPICMEKIVSQLLRPIIPWFLDKFKPWTV^ SKAGVQELYMGRNSPLFTSMRVLPETSDDDHL^ VLEIGMNFLSAEDMSAVLSMQLHKSVGLGMTANMHLTSMHVEGK^ [VFFQSILILKSSKLFVCGSNESRQIFGAETNSSRCEVCPELAISWPCKTMFCGASLFSD DCKATHWSWA end] ILVGVKFVRSWPFLGRVRLCFVEPPYFQMTVKPLIGHGLDVTEFPGISGWL^ - alt. N term DKLMDTAFGQTLVE^ PNMLVIDVEKFVSTPS^ DNDWFSIEERPPVAYVKLEILEGSDMKPSDMN^ GLSDPYVKGRLGPFKFQTQIQKKTLSPKWFEEFKIPITSWESLNELAMEVCDKDHMFDDSL^ GTCTIDIHELRGGQRHDKWISLKNVKKGRIHLAITVEDISE^ EKGLEESSRKVDAELPISTSVNKFNADELPDEKQVLVDEVEHINIDGQEQPGGLYVHRPG TGVPKTWESRKGRARNPDTEIYKEVDKSKDAPTPKSSGQGGFFGSFFRKSLKKGSFHDID PGIPTTPGPQSATELDPKIPQTPRPNLKEAGEKRTSIKIVVDEDAKPTRSAGDAENLTED VAKVMEKNAGEPGRSLTSILSRKISRKKPEDKLSDIPEQTEAQASELVKEGPVPVEGKPI DGHPTTENGHGDGASGEAAETQTSAQTSQ - GACCAGACCACGCCTCACTCTCGTCGGCTCGTCGCCTTGTCCGCGCGTGCGCCACCGTTT CCACCCAGATTCGCGCCCGCCACTTCCGACTAGCTCTTCGCGGCAAAAGAGATCGCCGGC TCGCCGGCCGGCCCGGAGCGCGGGGGTTCCGCTTCCGCGGCGGAGCAGCCGTCGGCTGGG GAGGGGAGATGGACGCCGGCGAGCTGCCCATCGTGTACCACATCGGCATCGTGCTGGCCG *** CGCTGTGGGCCGCGGGCTCCCTCGGCTTCCGCCACTCCGTCCTCTTCCTCCTCGCCTTCC TCTACCTCTACATG phase 0 ap003201.3 (61721-61408) - GTAAATGCTCGCTGTGCAATGAAATTGCGGAAGAGAATACAACATGAAGAAATGAAATCT GCCTACCAACGAAGA phase 0 ap003201.3 (60651-60577) - CTGCTATCTGATGCAGAATCAGTACGCTGGTTAAATTATGCAATAAAAAAGATGTGGCCT ATCTGTATGGAGAAGATCGTCTCACAACTTCTACGACCCATAATACCATGGTTCTTGGAT AAGTTCAAACCTTGGACAGTT phase 0 ap003201.3 (60417-60277) - AGTAAAGCAGGAGTTCAGGAGCTTTATATGGGCAGGAATTCACCACTGTTTACTTCAATG AGAGTTTTACCTGAGACATCAGATGATGACCATTTG phase 0 ap003201.3 (60115-60020) - GTTCTGGAGATAGGGATGAATTTTCTATCTGCTGAAGATATGAGTGCTGTACTTTCTATG CAGCTGCATAAGAGTGTCGGACTTGGAATGACTGCAAACATGCATCTGACTAGCATGCAT GTTGAGGGAAAG phase 0 ap003201.3 (59934-59803) atypical gc donor - mostly skipped but present in cb645326, introduces frameshift [GTTTTTTTTCAGTCTATTTTGATCTTGAAATCATCCAAGCTATTTGTTTGTGGTTCTAAC GAAAGCAGACAGATATTTGGTGCTGAGACAA] phase +1 ap003201.3 (59552-59462) - ATTCTAGTCGGTGTGAAGTTTGTCCGGAGTTGGCCATTTCTTGGCCGTGTAAGACTATGT TTTGTGGAGCCTCCTTATTTTCAGATGACTGTAAAGCCACTCATTGGTCATGGGCTTGAT GTCACTGAGTTTCCAGGAATTTCAGGATGGCTG phase 0 ap003201.3 (58782-58630) - GATAAGTTGATGGATACTGCATTTGGGCAGACATTAGTTGAG phase 0 ap003201.3 (58542-58501) - CCCAATATGCTTGTTATCGATGTGGAAAAATTTGTATCGACTCCCTCAG phase +1 ap003201.3 (58422-58374) - ACAATGACTGGTTCAGCATTGAGGAGAGACCTCCTGTTGCATATGTGAAACTTGAGATTT TAGAAGGATCCGACATGAAACCATCTGATATGAATG phase +1 ap003201.3 (58016-57921) - GGCTCTCCGACCCTTATGTGAAAGGTCGTCTTGGTCCTTTTAAATTCCAAACTCAGATAC AGAAGAAAACACTATCCCCTAAGTGGTTTGAAGAATTCAAAATACCCATTACATCGTGGG AGTCATTAAATGAACTTGCCATGGAAGTGTGTGATAAGGACCACATGTTTGATGACTCGC TTGG phase +2 ap003201.3 (57847-57664) - AACATGTACTATAGATATCCATGAGCTGAGGGGTGGTCAGAGACATGACAAATGGATATC ACTCAAGAATGTCAAGAAAGGAAGGATTCACTTGGCAATAACAGTTGAAGATATATCAGAG phase 0 ap003201.3 (57444-57324) - GAGAAGGGGTTGGAAGAATCATCAAGGAAAGTTGATGCTGAACTACCAATATCAACATCC GTCAACAAGTTTAATGCTGATGAACTGCCTGATGAAAAGCAAGTCTTAGTAGATGAAGTG GAGCACATTAACATTGATGGGCAAGAACAACCTGGAGGATTATATGTGCATCGCCCTGGC ACTGGAGTTCCCAAGACATGGGAATCACGGAAAGGGCGAGCACGTAATCCTGACACGGAG ATTTACAAAGAAGTTGACAAATCAAAGGATGCGCCTACCCCAAAAAGCAGTGGACAAGGG GGTTTTTTTGGCTCCTTTTTCCGGAAGAGCTTGAAGAAGGGAAGTTTCCATGATATTGAT CCCGGTATTCCTACAACGCCAGGGCCTCAGAGTGCAACAGAGCTTGATCCGAAGATCCCA CAAACTCCACGTCCAAACCTTAAGGAGGCCGGTGAAAAACGGACATCGATAAAGATAGTA GTCGATGAAGATGCGAAACCGACAAGGAGTGCGGGAGATGCAGAGAACTTGACAGAAGAT GTAGCCAAGGTGATGGAGAAAAACGCAGGTGAGCCAGGTAGATCACTGACAAGCATACTG AGTAGAAAGATTTCCAGGAAGAAACCAGAGGACAAGCTGTCTGATATCCCAGAGCAGACT GAAGCTCAAGCATCTGAGTTGGTGAAAGAAGGGCCTGTTCCAGTTGAGGGTAAACCTATT GATGGTCATCCGACAACTGAAAATGGCCATGGAGATGGTGCTTCAGGAGAAGCAGCTGAA ACGCAAACTAGTGCTCAGACTTCACAATGATTACAAGATCAGCCGCTGCTGTTGTTGCTG *** GTAGTTGTAGGTTTGCTTTGTTGTGCTTGTAGAACAAAATTACTTTAGAGATTGTGTTAC TTGTAAAATACAACAAAACATGATCATGTTGTAAAGTTACCTGCTCAGGTTTATACACGT CCATGTAAATCAAAGTTCATACTGTAATAACTTGTAAGTATGTAAACATGACTACACGAG AGGTTTGAGGGTACCATTTTCTCATGTTTTCGGTGGC ap003201.3 (57065-56009) -------------------------------------------------------------------------------- 117. Oryza chromosome 2 cDNA/est evidence no gene prediction http://rgp.dna.affrc.go.jp MDITEVTVVHHAALVLLALWAAVSAGWAHPAIFLAALLYLFA^ VNERYTMRLRKRIQHEERKCANQRR^ LLSDAETVRWLNYAVEKIWPVCMERVASEQFLLPIFPWFLEKFKPWTA^ RKAVIQDLYLGRNPPMFTDIRVVRQSTDDDHL^ VLEIGMNFLSADDMNATMAVQLRKRLGFGITANMHITGMHVEGK^ VLVGVRFLRQWPYIGRVRVCFVEPPYFQMTVKPLFGHGLDVTELPGISGWL^ DRMLDVAFGQTLVE^ PNMLVIDLEKFASEST^ DSWFSVDEKPPIAHAKVEILEGADMKPSDPN^ GLADPYVKGHLGPYRFQTKIHKKTLNPKWMEEFKIPVTSWAALNLLSLQVRDKDPIFDDTL^ GDCSISINKLRGGQRHDIWIALKNIKTGRIHIAVTVLEDENEK^ VPNDDDEQCGTPKGGKASTPRSSFSSRTNNESESSEEFRKISAEYEPVDIEGLEKVDVWV HRPGSDVAVTWEPRKGRARCQDSRILRENDVYCDSPKSCQSESQRSDSSTEEPANGKSRH HLHKVKKGLGKLAGAMFKSPKKESDDEASPCVTPHPNIKPLGEKRVSVRYVVDEDPSENL PDDQHSSPERGESESPTKRHLRKKAVHMVKHAGNKTAHNLKNMFSRKGSDKSKEGQDDQK DDPDTIVVEPSKVKKDNPDASEVDIDPSQVENDIPDSTAIDPLKVDSNVANNIVVDALEY ASESDAKDKPQ - CCCCGACGCAACAATTCCACACCTACCGCGGCTACCGAGCCACCGGCCAACCCCTCCCCC TCCCTCCAAAACCCGCACGCGCGGATCCCGTCGCGAGAGCCGAAATCACACGTCGCCACC GCAGCAGCAGCCGCGGCGCGCCACGCGGCCGCGGCGGACCCCGCCCGCCCGCCACGTCCC CCGCGCCGCCGACCACTCCGGCACGTAGTAGGCCGTGAGACATCCACCATATCTTCCCCG CCTCGGCGCGCGCGTACTCCTACGTCTACGTGCGTGAGCCCCCCACACACCCTCGCTCGC CGCGCCGCCGTCTCTAGTTTTTTTTTTCTAAAAAAAAAAAAGCCTCGGCCGCCGCAGCCG CCCCTGCCCATCGATCGCGGCTTGTCTCTTCCCCTTCCCTCTGCCTGGCGTGGAGTACTA CTGCGCTACTAGAGAGTTTGCTGGTGGAGGAGGAGGACGAGGAGGAGGAGGCTGGGTGGT GGCGGCCGCCGCGATGGACATAACGGAGGTGACGGTGGTGCACCACGCGGCGCTGGTGCT *** GCTCGCGCTCTGGGCCGCCGTGTCGGCCGGGTGGGCGCACCCGGCGATCTTCCTCGCCGC GCTCCTCTATCTGTTCGCG phase 0 ap004891.3 97818-98436 - GTGAATGAACGATACACAATGAGGCTGCGAAAGCGAATACAACATGAGGAAAGGAAATGT GCAAACCAAAGAAGG phase 0 ap004891.3 100024-100098 - CTTCTCTCTGATGCAGAGACTGTCAGGTGGTTGAATTATGCTGTTGAGAAGATCTGGCCG GTTTGCATGGAACGGGTTGCATCTGAGCAGTTCCTTTTGCCCATATTCCCATGGTTCCTG GAAAAGTTCAAACCATGGACAGCG phase 0 ap004891.3 100253-100396 - AGGAAAGCAGTGATCCAAGACCTTTACTTGGGCAGGAACCCACCAATGTTTACAGATATT AGGGTTGTCAGGCAATCAACTGATGATGACCATCTG phase 0 ap004891.3 100924-101019 - GTTTTAGAGATAGGAATGAACTTCCTATCTGCAGATGATATGAATGCAACAATGGCTGTG CAACTTAGGAAGAGATTAGGATTTGGCATCACAGCAAACATGCATATAACTGGGATGCAT GTTGAAGGGAAG phase 0 ap004891.3 101126-101257 - GTCCTAGTTGGGGTGCGATTTCTCCGACAGTGGCCATATATTGGTCGCGTAAGAGTGTGC TTTGTTGAGCCTCCATACTTCCAGATGACAGTCAAACCATTATTTGGTCATGGGCTTGAT GTAACTGAACTTCCAGGAATTTCTGGATGGCTT phase 0 ap004891.3 101340-101492 - GACAGGATGTTGGATGTCGCCTTTGGACAGACCCTTGTTGAG phase 0 ap004891.3 101602-101643 - CCTAATATGCTAGTTATTGACTTGGAAAAGTTTGCATCGGAATCAACAG phase +1 ap004891.3 102255-102303 - ATAGCTGGTTTAGTGTTGATGAGAAGCCACCTATTGCACATGCCAAGGTAGAGATCTTGG AAGGTGCTGATATGAAACCCTCTGATCCAAATG phase +1 ap004891.3 102937-103029 - GATTAGCTGATCCATACGTGAAAGGCCATCTTGGACCCTATCGTTTCCAGACAAAGATCC ACAAGAAAACACTCAATCCAAAATGGATGGAGGAGTTCAAAATACCAGTAACCTCATGGG CAGCTCTCAATCTTCTCTCTCTTCAAGTTCGAGATAAGGATCCCATCTTTGACGACACAC TCGG phase +2 ap004891.3 103178-103361 - TGACTGTTCCATAAGCATCAACAAATTGAGAGGTGGACAAAGGCACGACATATGGATTGC TCTGAAGAATATAAAGACAGGGCGGATTCATATAGCAGTAACAGTACTTGAAGATGAAAA TGAAAAG phase 0 ap004891.3 103513-103639 - GTTCCAAACGATGACGATGAGCAGTGTGGAACACCCAAGGGGGGTAAAGCAAGCACACCA AGGTCTAGCTTTTCGTCCAGGACCAACAATGAAAGTGAATCATCAGAGGAGTTTCGAAAG ATATCTGCTGAATATGAGCCAGTAGACATTGAAGGACTGGAAAAGGTTGATGTTTGGGTC CATCGGCCAGGCAGTGATGTCGCAGTCACTTGGGAGCCTCGGAAAGGACGTGCGAGGTGT CAGGATTCCAGAATCCTACGAGAGAATGATGTCTACTGTGACAGCCCTAAGTCGTGCCAA TCAGAATCTCAGAGAAGTGACTCCAGTACTGAAGAACCAGCCAATGGCAAATCACGCCAT CATCTCCACAAGGTCAAAAAGGGTTTGGGGAAACTAGCTGGTGCGATGTTCAAGAGCCCA AAGAAAGAGAGTGATGATGAAGCCTCGCCATGTGTGACGCCTCACCCAAATATAAAACCA CTTGGAGAAAAAAGGGTGTCAGTAAGATACGTCGTCGATGAAGATCCTTCTGAAAACTTG CCAGATGACCAGCATTCCAGTCCTGAGAGAGGCGAGTCGGAAAGTCCGACCAAGAGGCAT TTGAGGAAGAAGGCTGTGCACATGGTGAAACATGCGGGGAACAAAACAGCTCATAATCTG AAGAACATGTTCAGCAGGAAAGGCAGTGACAAGAGCAAAGAAGGCCAAGATGACCAGAAA GACGATCCTGATACTATAGTAGTAGAACCTTCAAAAGTTAAGAAAGACAATCCTGATGCA AGTGAGGTAGACATAGACCCTTCACAAGTTGAGAACGACATCCCCGATTCAACGGCAATT GACCCTTTGAAGGTTGATTCTAATGTGGCCAACAACATTGTGGTTGATGCACTAGAGTAT GCATCTGAATCTGATGCGAAGGACAAACCACAGTGAAATGTGTTCTGCTATTTTTGGCGG *** TCCTCGTGCTGTTGGGACTGTTCATGTAGGCAGGATACTAGGTAGCAAAATAGTCTGATA GCCTCCTGACAGCAAGCGAAGGTTGACAGTATAGTCCGTTTGGTTGGTTGAGTCCTCCAT CTTACCTGACGACCGATGTTTTTCTTGTATTATAGATGCTCAAGGAACAATACCTCTGTA CATGTCGTATGCAGACTGTCTAAGCTGTTTGCTTCTTGGACATGGAAAGCAGGTGGCCGG TTGGCTTTGGCAAGGTGTTGGATAGGAGAGAACGGACAAGGAGAACC ap004891.3 103880-105126 -------------------------------------------------------------------------------- 118. Caenorhabditis MBC2 Chromosome 3 does not agree with gene prediction T12A2.15 http://www.wormbase.org MSWQSYLVPLVGSAILSTFTFFL^ GKWDYSFVWVLIIIIASVTKSYLWRKRER^ RLIALRATALREREVIMAQLQDLPAWVQFPDTERVEWLNKVIHQLWPYVGEYTKTFMNDF IIPQVK^ AQMPGMFKNFKFTKMDMGDIPCRVGGIKVYTTNVGRDRIIVDMDVAYAGDADFTVSCCGF TGGMNNIQ^ FSGKLRAILKPLLPYPPMVGGVSGTFLEMPKMDFNLTGMGEMVELPGLIDAIRSVINSQ^ IAALCVLPNEIVVPLAPDVDVTQLYFPEPD^ GVVRLKIIEAKNLENRDISFIKKGKSDPYAEIQVGSQFFKTRTIDDDLNPIWNEYFEAVV DQADGQKLRIELFDEDQGKDEELGRLSVDLKLVQAKGTIDK^ WYPLEGCKHGDLHIKATWMNLSTELRHLEKQEWEAEWGQADKPIHSALLMVYIDSVADLP^ YPKSKLEPSPFVEVSLGKETQRTPVKVKTVNPLFQSKFLFFVRHLEGQELKFE^ AVDDGTRRSLGSLNIPLTTLLKEPNLEQNQQMHMLTLGVHQSPIVITTRIR^ ALIQGKPKKGNNSELGHDVLGEYGN^ AFHIERANGKVNGDVVAVEPAKTVNQDAADDEVEIKLNVDNYQ^ MLRSDSQGSLNSHGRSNSRLGRLFRSKHEMKKRET^ RADENRGEIEIQIDFDDLVNQLKIALIRCRDLMTFDKKDQCNPYVS^ VKLVALDGNKEVFKKKTPTAKNTRHPHFDN^ HVEIDINPSDLLNHKVVINVKDDTNYGTFVAKPVLGC^ LEIRLDSLMNRQLSQRWIPLSVERK - GAAGCAGTCCCAACAGACCCAATGAGTTGGCAGTCTTATCTGGTTCCACTTGTGGGCAGTGCAATTCTCT *** CCACATTCACATTTTTCTTGG phase +1 u13019.1 (12072-11982) - GAAAATGGGACTACTCGTTTGTATGGGTTCTGATCATCATAATCGCTAGCGTCACAAAAAGCTATTTGTG GAGGAAGAGAGAGCGAAG phase +2 u13019.1 (11919-11832) - GTTAATAGCTCTGCGAGCAACAGCTCTTCGAGAGCGAGAAGTCATAATGGCTCAACTTCAAGACCTCCCC GCGTGGGTACAATTTCCAGATACGGAACGTGTTGAGTGGTTGAATAAGGTTATTCATCAGTTGTGGCCAT ATGTTGGAGAATATACAAAAACTTTTATGAATGACTTCATTATTCCGCAGGTTAAG phase 0 u13019.1 (11499-11304) - GCTCAAATGCCGGGAATGTTCAAAAACTTTAAATTTACCAAAATGGACATGGGTGATATTCCATGTAGAG TTGGTGGAATCAAAGTGTACACAACAAATGTCGGACGTGATCGTATCATAGTGGATATGGATGTTGCATA CGCTGGTGACGCTGACTTTACGGTTTCATGCTGTGGATTTACTGGTGGAATGAATAATATTCAG phase 0 u13019.1 (11156-10953) - TTTTCCGGAAAACTCCGTGCAATTCTGAAACCTCTTCTACCGTATCCCCCAATGGTTGGTGGAGTCTCTG GAACGTTCCTCGAGATGCCAAAAATGGATTTCAACTTGACTGGAATGGGAGAAATGGTCGAGTTACCAGG ACTTATCGATGCGATTCGAAGTGTAATTAATAGCCAG phase 0 u13019.1 (10911-10735) - ATCGCAGCGCTGTGTGTCCTGCCGAATGAGATCGTTGTGCCACTAGCTCCTGATGTAGATGTCACTCAAC TCTACTTCCCAGAACCAGAT phase 0 u13019.1 (10687-10598) - GGTGTGGTCCGTCTGAAAATCATCGAAGCAAAGAATCTCGAAAATCGAGACATCTCTTTTATTAAAAAGG GAAAATCAGATCCGTACGCGGAAATCCAAGTGGGATCGCAATTCTTCAAGACCCGAACCATTGACGATGA CTTGAACCCGATTTGGAATGAATATTTTGAAGCCGTGGTAGATCAGGCTGATGGACAGAAGTTGAGAATT GAGTTGTTTGATGAGGATCAAGGAAAAGATGAAGAGCTGGGAAGACTGTCAGTTGACTTGAAATTAGTTC AAGCTAAGGGAACTATTGATAAG phase 0 u13019.1 (10458-10156) - TGGTATCCATTGGAAGGCTGTAAGCATGGAGATCTTCACATCAAAGCCACATGGATGAATCTCTCCACAG AACTCCGTCATCTTGAGAAACAAGAATGGGAAGCTGAATGGGGACAAGCAGATAAACCAATTCATTCGGC ACTACTCATGGTTTATATTGATTCTGTAGCAGACCTTCCA phase 0 u13019.1 (10111-9932) - TATCCAAAGTCAAAACTTGAGCCATCTCCATTTGTGGAAGTCAGTTTGGGAAAGGAGACACAGAGAACAC CGGTCAAAGTGAAAACGGTTAATCCACTGTTTCAGTCTAAGTTCTTGTTTTTTGTGAGACATCTAGAAGG ACAGGAATTGAAATTTGAG phase 0 u13019.1 (9884-9726) - GCAGTGGACGATGGTACACGCAGATCTCTTGGCTCTCTGAACATTCCTCTTACGACACTTCTCAAAGAAC CTAATTTGGAGCAGAACCAACAGATGCACATGCTCACACTAGGTGTTCACCAGAGTCCCATAGTTATTAC AACAAGGATTCGG phase 0 u13019.1 (9663-9511) - GCTTTGATTCAAGGAAAACCAAAGAAAGGAAATAACAGTGAACTGGGACACGATGTACTGGGAGAATATG GAAATG phase +1 u13019.1 (8924-8849) - CATTCCACATCGAGCGAGCAAATGGAAAAGTCAACGGAGATGTTGTAGCGGTTGAGCCTGCTAAAACTGT CAACCAAGACGCGGCAGATGACGAGGTTGAGATTAAGTTGAACGTCGATAATTATCAG phase 0 u13019.1 (8513-8386) - ATGCTCCGCTCCGATTCTCAGGGATCTTTGAATAGCCATGGAAGATCCAACAGTCGTCTTGGTAGACTAT TTCGTTCCAAGCACGAGATGAAGAAAAGAGAGACTAG phase +2 u13019.1 (8132-8026) - AGCTGATGAAAATCGCGGAGAAATCGAAATTCAAATTGATTTTGACGATCTTGTGAATCAGCTCAAGATC GCTCTGATTCGGTGTCGAGACTTGATGACTTTTGACAAAAAGGATCAATGTAATCCTTATGTTTCG phase 0 u13019.1 (7979-7844) - GTGAAACTGGTGGCGTTGGATGGAAATAAGGAGGTTTTCAAAAAGAAAACACCGACAGCCAAAAATACGA GACATCCGCATTTCGATAACCA phase +2 u13019.1 (7735-7644) - TGTCGAAATCGACATAAACCCATCAGATCTACTGAATCATAAAGTAGTAATCAATGTGAAAGATGACACA AACTACGGAACATTTGTTGCAAAACCAGTTCTTGGATGT phase 0 u13019.1 (7520-7412) - CTTGAAATTCGTCTGGACAGCCTGATGAATCGTCAACTCAGCCAAAGATGGATCCCTCTTTCTGTAGAGA GGAAATAATGATATTCTCCTAAAAATTCCCGGTTTCGAAATGCAATATTCAAGTGATTCACTTACATGTA *** CTATTATTAAAATGTCTGATTTTTCCTGCCTCTTCCCAATTCTTTTCTCAGTGCACTTACGGGTT u13019.1 (7364-7160) -------------------------------------------------------------------------------- 119. Drosophila CG6643 chromosome 3R Agrees with Berkeley Drosophila Genome Project gene prediction CG6643 http://www.fruitfly.org Transcript complexity affecting Nterm MSDNSPSVPLAEFTIPPDPTETEPFVPLVEVKKMNESPVVTPTTPTGNGTPPTQTTNGNS - alt. Nterm IVATKSVSDDNSIFSVFYTLGKKVAIVGSIYLVGYMGWSVAWLIAPVILSVARDQLAKTS EKKRDIAKASALASEKDVILARIDELPAWVYFPDVERCEWLNK^ ILKQVWPNANHFARTLVKETIEPNVALALANYKMHGFRFDRIILGTIPPRIGGVKIYDKN VDRNEIIMDLDLFYASDCDINFYLGGMKGGIKDFQIHGWVRVVMKPLIRSMPLVGGLQIF FLNNPNIDFNLVGVIDFMDMPGLSDLLRRIIVEQIGNVMVLPNKLPISLSEEVSAVALKM PEPE^ GILRIHVVEAKDLMKKDISVLGKGKSDPYAIINVGAQEFKTQIIDNNVNPKWDYWCE^ ATVFIEMGQFVEIQLKDSDDSKKDENLG^ RASIDIASVIKKGVVDS^ WLTLEDAKHGLLHVRLQWYKLTADPNDLQQILLETQLLRVTSMSSAVLSVFIDSARHLK^ - alt. Nterm QARSSSKPDPYLVCSVNKQKQQTAMIMRDDSPVWEQGFTFLVSNPDNESLNIKIYDQKTG NDIGQYTYTLSTLLKQFNMEVIQQPFQLQKSGPESKLYMSLSLRILKPGEIDKDSDALEQ VAALTRSSSVKTPDVAAVSPPAFK^ ESQASSKRLSAESPISEEDPVAATKISPAMSASTSSEKPISELATSVLTHRFPDSTSSPG EHGLGRMQLSIRYSAQRQKLDVTIHKIQKIPLRDPSNIPDPYVKLYLLPGRTKESKRKTS VIKDNCNPVYDASFEYLISIAELRQTELEVTVCTQKGFLSGGSPIIGM^ LKIPLDDAEITTQTGLNSWFDLQPEIRHE - start 1 TACAACGGAACGCTCAGCACGGTTAATGTGAAAAGTCCAGCGGATGGTTTTCCAAAAGCCTGCGGAGGAA ATTTGCGCGCGACTTTTCCGAATCAATACAGAAACTTGTGTGCCGGGCAGCTGAAAAAAGCGTAATAAAA GAAAGGAAACATTACTACAAAGGGGCCGCACAATTGAATTTTATTTTTGGTAACCCATTGACATTGTTTG CAAAAAGGACCAGTGACTCTAAAACTGGGCAAAGGCTTAGTGGAAAATGAGACCACTGTAAATGTCCTTT GACAACTATGAACTCTTTAATTTTTTTGCCGTTCAAGTGAAGAAAGTTAAACATAAGTAAACCGTCCTAA G ae003748.3 87750-88100 - start2 more common AGTTCCGAAACGCCGCTCACAATGAAAAGACGCTGAATTCGCTCCGTTTATTACAGCATTTCGAAAATTA AATATACTGAAGTGAAGTAATCAGGTCTATTACGAATTCGTTCCGTTCTCTCG ae003748.3 92048-92170 - skipped if start1 ATGCACACAAAGTTTTTCCAAACCGAAAAATCATAAAAAACAAACACAACACCAAGTGAGAGCAGAACCC AAACGATGAG *** phase +2 ae003748.3 92716-92795 - CGATAACAGTCCATCGGTGCCCTTGGCGGAGTTCACCATCCCACCCGATCCCACGGAGACCGAACCTTTT GTGCCACTGGTGGAGGTTAAAAAAATGAACGAATCCCCAGTGGTAACGCCGACCACGCCCACCGGCAATG *** GTACACCGCCCACGCAGACGACAAATGGAAACTCAATTGTGGCCACAAAATCCGTAAGCGATGATAACAG CATTTTCTCCGTGTTCTACACGCTGGGCAAGAAGGTGGCCATTGTGGGATCCATTTATCTGGTGGGTTAC ATGGGCTGGTCGGTGGCCTGGTTGATAGCGCCGGTCATCCTCTCGGTGGCACGCGACCAGTTGGCCAAGA CGTCGGAGAAGAAGCGCGACATTGCCAAGGCCTCGGCTTTGGCGTCCGAGAAGGACGTAATCCTGGCCAG AATCGACGAGCTGCCCGCGTGGGTCTACTTTCCCGATGTGGAGCGCTGCGAGTGGTTGAATAAG phase 0 ae003748.3 94360-94843 - ATCTTGAAACAAGTGTGGCCCAATGCCAATCACTTTGCACGCACCTTGGTAAAGGAAACCATCGAACCCA ATGTGGCTTTAGCTCTGGCCAACTACAAGATGCATGGCTTTCGGTTCGATCGCATTATTCTGGGCACCAT TCCACCGCGGATCGGCGGTGTGAAGATCTACGATAAGAACGTGGATCGCAACGAGATCATTATGGATCTG GATCTGTTTTATGCCAGCGATTGCGACATCAATTTCTATTTGGGTGGTATGAAGGGTGGCATCAAGGATT TTCAGATCCATGGCTGGGTGCGAGTGGTGATGAAGCCACTGATCCGATCGATGCCACTGGTGGGCGGTCT GCAGATCTTCTTCCTGAACAATCCGAATATCGATTTCAATTTGGTGGGTGTGATTGATTTTATGGACATG CCGGGTCTGAGTGACTTGCTGCGTAGGATCATCGTGGAGCAGATTGGCAATGTGATGGTGTTGCCAAACA AACTGCCCATTTCACTCAGCGAAGAGGTTTCGGCGGTGGCCCTCAAGATGCCCGAACCAGAG phase 0 ae003748.3 94905-95456 - GGCATCCTGCGCATTCACGTGGTCGAGGCCAAGGATCTGATGAAGAAGGACATCAGTGTGCTGGGCAAAG GCAAGTCGGATCCCTATGCCATCATCAATGTGGGCGCCCAGGAGTTCAAGACCCAGATCATTGATAACAA TGTGAATCCCAAGTGGGACTATTGGTGTGAG phase 0 ae003748.3 95517-95687 - GCTACTGTTTTTATTGAAATGGGTCAATTTGTCGAGATTCAATTGAAGGACTCGGACGATTCCAAGAAAG ACGAGAACCTGGGCAG phase +2 ae003748.3 95929-96014 - alt start bf505384,bf496914 most use internal pickup TCTTTTTTTTTTTCTTTTGATTTAAAATCATATTTGCCGTGAACTAATTTAACTTTTTAACTACCCAAAA TAG]AGCCAGCATCGATATTGCCAGCGTGATCAAGAAAGGCGTTGTGGATAGT phase 0 ae003748.3 97314/97387-97435 - TGGCTCACCTTGGAAGATGCCAAGCATGGACTTCTGCATGTCCGCCTGCAATGGTACAAACTCACTGCCG ATCCCAATGATCTGCAACAGATTTTGCTGGAAACGCAACTCCTACGCGTGACCAGCATGAGTTCGGCGGT ACTCAGTGTATTCATCGATTCAGCCAGGCATTTGAAG phase 0 ae003748.3 97496-97672 - CAAGCTCGATCCAGCTCCAAACCCGATCCCTATCTGGTGTGCAGCGTGAACAAGCAAAAACAGCAGACTG CCATGATAATGCGAGATGATTCTCCCGTTTGGGAGCAGGGCTTCACCTTCCTGGTCAGCAATCCCGACAA CGAGAGTCTGAACATCAAGATCTACGACCAGAAGACAGGAAACGACATTGGCCAATATACCTATACACTC AGCACGCTGCTGAAGCAATTCAATATGGAGGTTATACAGCAGCCATTCCAACTCCAGAAGTCTGGACCGG AATCGAAGCTCTATATGTCGCTATCGCTGCGCATTTTGAAGCCCGGCGAGATTGACAAGGATTCGGATGC CTTGGAGCAAGTGGCAGCGCTCACGCGCAGCAGTTCCGTGAAAACACCAGATGTTGCTGCAGTTTCTCCT CCAGCATTTAAG phase 0 ae003748.3 97733-98164 - GAATCTCAGGCATCCAGCAAGCGTTTGTCCGCCGAATCGCCCATCAGTGAAGAAGATCCTGTGGCGGCTA CGAAAATCTCCCCGGCCATGTCGGCCTCCACCTCCAGCGAAAAACCCATCAGCGAGCTGGCCACCTCTGT GCTGACCCACCGCTTTCCAGACTCCACCTCCTCACCCGGCGAACATGGCCTTGGACGAATGCAGTTGTCG ATCCGCTACAGCGCCCAGCGTCAAAAACTAGACGTGACCATACACAAAATCCAGAAGATACCACTTCGCG ATCCCAGCAATATCCCCGATCCGTATGTTAAGCTGTATCTGTTGCCTGGACGCACCAAGGAGTCGAAACG CAAGACGAGCGTGATCAAGGACAACTGCAACCCCGTCTACGATGCATCCTTTGAGTACCTGATTTCCATT GCCGAACTCAGGCAGACGGAACTGGAGGTGACGGTGTGCACCCAAAAGGGATTCCTATCCGGCGGTAGTC CCATCATTGGCATG phase 0 ae003748.3 98490-98993 - CTGAAAATTCCTCTGGATGATGCCGAGATAACCACACAAACTGGCTTGAATTCTTGGTTCGACTTGCAGC CTGAAATACGGCACGAGTAGGAAAAGCCGAGTCAAATGCCGAATGCAGAGTCTCATTACAGCACAATCAA *** CTCAAGAAAAACTCGACACTTTTTTACCATTTGCACTTAAATCCTTTTTTATTCGTTATGTATACTTTTT TTGGTCCCTAACCAAAACAAAACCAAACTCTCTTAGTCGTGCCTCTATATTTAAAACTATCAATTTATTA TAGTCAATAAATCGAACTGTGTTTTCAACAAACGAA ae003748.3 99267-99582 -------------------------------------------------------------------------------- 120. Homo KIAA0747 chromosome 12 Abundance high MERSPGEGPSPSPMDQPSAPSDPTDQPPAAHAKPDPGSGGQPAGPGAAGEALAVLTSFGR RLLVLIPVYLAGAVGLSVGFVLFGLALYLGWRRVRDEKERSLRAARQLLDDEEQLTAKTL YMSHRELPAW^ VSFPDVEKAEWLNK^ IVAQVWPFLGQYMEKLLAETVAPAVRGSNPHLQTFTFTRVELGEK^ PLRIIGVKVHPGQRKEQILLDLNI^ SYVGDVQIDVEVKKYFCKAGVKGMQ^ LHGVLRVILEPLIGDLPFVGAVSMFFIRRP^ TLDINWTGMTNLLDIPGL^ SSLSDTMIMDSIAAFLVLPNRLLVPLVPDLQDVAQLRSPLPR^ GIIRIHLLAARGLSSKDKYVKGLIEGKSDPYALVRLGTQTFCSRVIDEELNPQWGETYE^ VMVHEVPGQEIEVEVFDKDPDKDDFLG^ RMKLDVGKVLQASVLDD^ WFPLQGGQGQVHLRLEWLSLLSDAEKLEQ^ VLQWNWGVSSRPDPPSAAILVVYLDRAQDLP^ MVTSELYPPQ]LKKGNKEPNPMVQLSIQDVTQESK^ AVYSTNCPVWEEAFRFFLQDPQSQELDVQ^ VKDDSRALTLGALTLPLARLLTAPELILDQWFQLSSSGPNSRLYMKLVMR^ ILYLDSSEICFPTVPGCPGAWDVDSENPQRGSSVDAPPRPCHTTPDSQFGTE^ HVLRIHVLEAQDLIAKDRFLGGLVKGKSDPYVKLKLAGRSFRSHVVREDLNPRWNEVFE^ VIVTSVPGQELEVEVFDKDLDKDDFLG^ RCKVRLTTVLNSGFLDE^ WLTLEDVPSGRLHLRLERLTPRPTAAELEE^ VLQVNSLIQTQKSAELAAALLSIYMERAEDLP^ LRKGTKHLSPYATLTVGDSSHKTK^ TISQTSAPVWDESASFLIRKPHTESLELQ^ VRGEGTGVLGSLSLPLSELLVADQLCLDRWFTLSSGQGQVLLRAQLG^ ILVSQHSGVEAHSHSYSHSSSSLSEEPELSGGPPHITSSAPELRQRLTHVD^ SPLEAPAGPLGQVKLTLWYYSEERKLVSIVHGC^ RSLRQNGRDPPDPYVSLLLLPDKNRGTKRRTSQKKRTLSPEFNE^ RFEWELPLDEAQRRKLDVSVKSNSSFMSRERELLGK^ VQLDLAETDLSQGVAR^ WYDLMDNKDKGSS - GGCTTGAAGTCCCCTCCTCCATCCCGGGGATCACGTTTTGCCTGGGGGAGCTGATCGCAAGACTAGG CAACCTCCAGCCAGTCCCTGGGTCGGGCGGATCCTCCCAGAGGTGGCACAATGGAGCGATCTCCAGG *** AGAGGGCCCCAGCCCCAGCCCCATGGACCAGCCCTCTGCTCCCTCCGACCCCACTGACCAGCCCCCC GCTGCTCACGCAAAGCCAGACCCAGGTTCTGGGGGCCAACCTGCTGGCCCTGGCGCGGCGGGTGAGG CCCTGGCGGTGCTGACTTCATTCGGGAGGCGGTTGCTGGTGCTGATACCTGTGTATTTGGCCGGGGC AGTGGGACTCAGCGTGGGTTTCGTGCTCTTCGGCCTCGCCCTCTACCTGGGCTGGCGCCGGGTCCGC GACGAGAAAGAACGGAGCCTTCGAGCAGCGAGGCAGCTACTGGACGACGAG#GAGCAGCTCACTGCG AAAACTCTCTATATGAGTCATCGAGAGCTACCTGCCTGG phase 0 ac034102.32 (33096-32590) region between # deleted in ak128730 - GTCAGCTTCCCAGACGTGGAAAAGGCTGAATGGCTCAATAAG phase 0 ac034102.32 (30717-30676) - ATTGTGGCCCAGGTCTGGCCCTTCCTGGGCCAGTATATGGAG#AAGCTTCTGGCTGAAACTGTGGCT CCGGCTGTTAGGGGATCTAACCCCCATCTGCAAACATTTACATTTACACGAGTGGAACTGGGTGAAA AG phase 0 ac034102.32 (30508-30374) - CCATTGCGCATCATTGGAGTCAAGGTTCACCCAGGTCAGAGAAAAGAGCAGATCCTGCTGGACTTGA ACATCAG phase +2 ac034102.32 (30259-30186) - CTATGTAGGTGATGTGCAGATTGATGTGGAAGTGAAGAAATATTTTTGCAAAGCAGGAGTCAAGGGC ATGCAG phase 0 ac034102.32 (30055-29983) - CTACATGGCGTTTTGCGGGTGATACTGGAGCCACTCATTGGGGACCTTCCCTTCGTGGGGGCTGTGT CAATGTTCTTCATCCGACGCCCG phase 0 ac034102.32 (29822-29733) - ACCCTAGACATCAACTGGACAGGGATGACCAACCTGCTGGATATCCCAGGACTTAG phase +2 ac034102.32 (29550-29495) - CTCACTCTCTGACACCATGATCATGGACTCCATTGCTGCCTTCCTCGTGTTGCCCAACCGATTACTG GTGCCCCTTGTGCCTGACCTTCAAGATGTGGCTCAGTTGCGTTCCCCTCTGCCCAGG phase 0 ac034102.32 (29090-28967) - GGCATTATTCGAATTCACCTGCTGGCTGCTCGAGGGCTGAGTTCCAAGGACAAATATGTGAAGGGCC TGATTGAGGGCAAGTCAGACCCATATGCACTTGTGCGTTTGGGTACCCAGACATTCTGCAGTCGTGT CATTGATGAAGAACTCAACCCACAGTGGGGAGAGACTTATGAG phase 0 ac034102.32 (28878-28702) - GTGATGGTACACGAGGTCCCAGGGCAGGAGATTGAAGTGGAGGTGTTCGACAAGGATCCAGATAAAG ATGACTTTCTGGGCAG phase +2 ac034102.32 (28580-28498) - AATGAAGCTGGATGTAGGGAAGGTGTTACAGGCTAGCGTTCTGGATGAT phase 0 ac034102.32 (27882-27834) - TGGTTCCCTCTACAAGGTGGGCAAGGCCAAGTTCACTTGAGGCTAGAATGGCTGTCACTTTTGTCAG ATGCAGAGAAACTGGAGCAG phase 0 ac034102.32 (27711-27625) - GTTCTACAGTGGAATTGGGGAGTCTCCTCTCGACCAGATCCCCCGTCAGCTGCCATCTTAGTTGTCT ACCTGGATCGGGCCCAGGATCTTCCT phase 0 ac034102.32 (27518-27426) - second pickup in most ATGGTGACCTCTGAATTGTACCCACCACAG]CTGAAGAAGGGGAACAAGGAACCCAACCCTATGGTA CAACTGTCAATTCAGGATGTGACTCAGGAGAGCAAG phase 0 ac034102.32 (27219/27189-27118) - GCTGTCTACAGTACCAACTGCCCAGTGTGGGAGGAAGCGTTCCGGTTCTTCCTACAAGACCCTCAAA GCCAGGAGCTCGATGTGCAA phase 0 ac034102.32 (26957-26871) - GTGAAGGATGATTCCAGGGCCCTGACTTTAGGAGCACTGACGCTGCCTCTGGCCCGCCTGCTGACTG CCCCAGAACTCATCCTGGACCAGTGGTTCCAGCTCAGCAGCTCTGGTCCAAACTCCAGACTCTATAT GAAACTAGTCATGAGG phase 0 ac034102.32 (24555-24406) - ATCCTGTACTTGGATTCATCAGAAATATGCTTCCCCACGGTGCCTGGTTGTCCTGGTGCTTGGGACG TGGACAGTGAGAATCCCCAGAGAGGCAGCAGTGTGGATGCCCCACCTCGACCCTGTCACACGACTCC TGATAGCCAGTTTGGGACTGAG phase 0 ac034102.32 (24081-23926) - CATGTGCTTCGGATCCATGTATTAGAGGCCCAGGACCTGATTGCCAAAGACCGTTTCTTGGGGGGAC TGGTGAAGGGCAAGTCAGACCCCTATGTCAAACTAAAGTTGGCAGGACGAAGCTTCCGGAGCCATGT TGTTCGGGAAGATCTCAATCCCCGCTGGAATGAGGTTTTTGAG phase 0 ac034102.32 (23800-23624) - GTGATCGTCACATCAGTTCCAGGCCAAGAGCTAGAGGTTGAAGTCTTTGACAAGGACTTGGACAAGG ATGATTTTCTGGGCAG phase +2 ac034102.32 (23467-23385) - GTGTAAAGTGCGTCTCACCACAGTCTTAAACAGTGGCTTCCTTGATGAG phase 0 ac034102.32 (23273-23225) - TGGCTGACCCTGGAGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCGTCTCACCCCCCGTC CCACTGCTGCTGAGTTAGAGGAG phase 0 ac034102.32 (23116-23027) - GTGCTGCAGGTGAATAGTTTGATCCAGACTCAGAAGAGTGCGGAGCTGGCTGCGGCCCTGCTATCCA TCTATATGGAGCGGGCAGAGGACCTCCCG phase 0 ac034102.32 (22895-22800) - CTGCGAAAAGGCACCAAGCACCTCAGCCCTTATGCTACTCTCACTGTGGGAGATAGTTCTCATAAAA CCAAG phase 0 ac034102.32 (22531-22460) - ACTATTTCGCAAACTTCAGCCCCTGTCTGGGATGAGAGTGCCTCCTTTCTCATCAGGAAACCACACA CTGAGAGCCTAGAGTTGCAG phase 0 ac034102.32 (22372-22286) - GTTCGGGGTGAGGGCACTGGCGTGCTGGGCTCATTATCCCTGCCCCTCTCAGAGCTCCTCGTGGCTG ACCAGCTCTGCTTGGACCGCTGGTTTACACTCAGCAGTGGTCAGGGGCAGGTGCTACTGAGAGCACA GCTAGGG phase 0 ac034102.32 (19014-18874) - ATCCTGGTGTCCCAGCACTCGGGAGTGGAAGCTCATAGCCACAGCTACAGCCACAGCTCCTCATCGC TGAGTGAAGAACCAGAGCTCTCGGGGGGACCCCCTCACATCACCTCCTCAGCCCCAGAGCTCCGGCA GCGCCTAACACATGTTGACAG phase +2 ac034102.32 (18721-18567) - TCCCCTTGAGGCTCCAGCCGGGCCTCTGGGCCAGGTGAAACTGACTCTGTGGTACTACAGTGAAGAA CGAAAGCTGGTCAGCATTGTTCATGGTTGCCG phase +2 ac034102.32 (18464-18366) - GTCCCTTCGACAGAATGGACGTGATCCTCCTGATCCCTATGTGTCACTGTTGCTACTGCCAGACAAG AACCGAGGCACCAAGAGGAGGACCTCACAGAAGAAGAGGACCCTGAGTCCTGAATTTAATGAACG phase +2 ac034102.32 (18282-18151) - GTTTGAGTGGGAACTCCCCCTGGATGAGGCCCAGAGACGAAAGCTGGATGTCTCTGTCAAGTCTAAT TCCTCCTTCATGTCAAGAGAGCGTGAGCTGCTGGGGAAG phase 0 ac034102.32 (18071-17966) - GTGCAGCTGGACCTAGCTGAGACAGACCTTTCCCAGGGTGTAGCCCGGTG phase +2 ac034102.32 (17719-17670) - GTATGACCTGATGGACAACAAGGACAAGGGCAGCTCCTAGGAGCTGGCGAGTCCCAGCCTGACTGCT *** CTGTCTTCCTGCCTTCGTCTCGCTCCATCACCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAG GGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG AGAAGAACCGTATGTTCCCTTTACTGCACGGCCTTTATCCTTCTGGGCCCCTGGGGCGGGGACCTGA GCTGGCTGTTTCCTGCTTTGCCTGCACATTGTTCTCCCTTCCTCCCAACTCCTCAGGGCCTTCTGTA TCTGTGCCTGGCCAGTGGCAGCACTAGCAGTGGTATTAGCTTATGCCAAATACAGCTTTGGAAGGAT CTTTTTTTCTTTAACTAGATGGTCACCTTCTTCCCTACCACACATGGGTGGGAAGGTGGACAGGCTA ACCTCTCCAGCTGTGAGCCTCTTAGACTACTGCATGTAGCAAATGTTCAGCAGCTCAGGCCCCCATG TCCAGTTCTGTCCCCACTGTCCTCAACCCTGTCCTGAAAATTCTACTGCTTTGATGGCTGGGGCCAG TCTCTTGTCACTTTGGAAACTGAGGACGCGTGGATTCTACTCAAGCCTCCAAGTAGTGGCATATCAG TCTTGGAGCTCCTAGCTGGTGATACGGAGAGGGCTTTGGAGGACTTGGGACAGCAGGGCCAATTTTT TTGCCCAAGTGCCTAGGCTGCTAACTCACTGACTAGAACTTAATCTGGTACTTTACAGTTTTGCACC AACTCTGCCAAGCCACTGGATCTTACATTAAACATCATACTCAAACCA ac034102.32 (17476-16625) -------------------------------------------------------------------------------- 121. Homo CHR3SYT chromosome 3 Abundance moderate Transcript complexity affecting Nterm and Cterm MRAEEPCAPGAPSALGAQRTPGPELRLSSQLLPELCTFVVRVLFYLGPVYLAGYLGLSIT WLLLGALLWMWWRRNRRGKLGRLAAAFEFLDNEREFISRELRGQHLPAW^ IHFPDVERVEWANK^ IISQTWPYLSMIMESKFREKLEPKIREKSIHLRTFTFTKLYFGQK^ CPRVNGVKAHTNTCNRRRVTVDLQI^ CYIGDCEISVELQKIQAGVNGIQ^ LQGTLRVILEPLLVDKPFVGAVTVFFLQKP^ HLQINWTGLTNLLDAPGI^ NDVSDSLLEDLIATHLVLPNRVTVPVKKGLDLTNLRFPLPC^ GVIRVHLLEAEQLAQKDNFLGLRGKSDPYAKVSIGLQHFRSRTIYRNLNPTWNEVFE^ FMVYEVPGQDLEVDLYDEDTDRDDFLG^ SLQICLGDVMTNRVVDE^ WFVLNDTTSGRLHLRLEWLSLLTDQEVLTE^ DHGGLSTAILVVFLESACNLP^ RNPFDYLNGEYRAKKLSRFAR^[V^KQGQQRPFFLCQTICRQEDTYK-end] [IPHRTRSAKTLLPMSNYL-end] NKVSKDPSSYVKLSVGKKTHTSK^ TCPHNKDPVWSQVFSFFVHNVATERLHLK^[V-end] [VLDDDQECALGMLEVPLCQILPYADLTLEQRFQLDHSGLDSLISMRLVLRVNLSGPLP-end] [CSFMTWIEVVLFQGASAFAAAQYL^SSCKWRNESWGAHTQDLKP-end] FLQVEERELGSPYTGPEALKKGPLLIKKVATNQGPKAQPQEEGPTDLPCPPDPASDTKDV SRSTTTTTSATTVATEPTSQETGPEPKGKDSAKRFCEPIGEKKSPATIFLTVPGPHSPGP IKSPRPMKCPASPFAWPPKRLAPSMSSLNSLASSCFDLADISLNI^[EYAPLCLIFSKIA CMKNTSLDGKVDMNLHFCASCFFTKYLPKRQHGVVERTQDKGERAKQAVYGSSCVLTIK-end] [MLLCLWGWRKRANACYGERSDGLFLYR] - alt. Nterm (E)GGDLRRRQLGEIQLTVRYVCLRRCLSVLINGC^[R-end] [RKEVGMS-end] RNLTPCTSSGADPYVRVYLLPERKWACRKKTSVKRKTLEPLFDE^[T-end] TFEFFVPMEEVKKRSLDVAVKNSRPLGSHRRKELGK^ VLIDLSKEDLIKGFSQ^(end) WYELTPNGQPRS - start 1 AGCCGAGAACTGGGGCGGCGCGGCGCGGCGCGGTGCATTTCCAGGCGCTGCTCTCCGTCGCAGAGAACCCTGAG CTCGGCGCGCCGAGAGTCCCAGCAGGGCAAGGGGGCGCGGCGTCCTGGTCCTCGAGCTTGGGAGACAGATGCGC ATGGGCGTGGGGGCATGCGGACCTAAGCTCGGGTGAAGCTCTCGGGAAGGGCAAGACTGCGGCGACGAGATGCG *** AGCAGAGGAGCCCTGCGCCCCCGGGGCCCCCAGCGCCCTGGGAGCCCAGCGCACGCCGGGCCCCGAGCTGCGCC TGTCCAGCCAGCTGCTGCCCGAGCTCTGTACCTTCGTGGTGCGCGTGCTGTTCTACCTGGGGCCTGTCTACCTA GCTGGCTACCTGGGGCTCAGCATAACCTGGTTGCTGCTCGGCGCCCTGCTGTGGATGTGGTGGCGCAGGAACCG CCGCGGGAAGCTTGGGCGCCTGGCCGCCGCCTTCGAATTCCTTGACAATGAACGCGAGTTCATCAGCCGCGAGC TGCGGGGCCAGCACCTGCCAGCCTGG phase 0 ac022497.18 87496-88039 - ATCCACTTCCCGGACGTGGAGCGGGTCGAGTGGGCCAACAAG phase 0 ac022497.18 104962-105003 - ATCATCTCTCAGACCTGGCCCTACCTAAGCATGATCATGGAAAGCAAGTTCCGGGAGAAACTTGAGCCCAAGAT CCGAGAGAAGAGCATCCACCTGAGGACCTTTACCTTTACCAAGCTCTACTTTGGACAGAAG phase 0 ac022497.18 108108-108242 - TGTCCCAGGGTCAACGGTGTCAAGGCACACACTAATACGTGCAACCGAAGACGTGTGACTGTGGACCTGCAGATCTG phase +2 ac022497.18 110482-110558 - CTACATCGGGGACTGTGAGATCAGTGTGGAGCTGCAGAAGATTCAGGCTGGTGTGAACGGGATCCAG phase 0 ac022497.18 112101-112167 - TTGCAGGGCACCCTGCGGGTCATCCTGGAGCCCCTCCTAGTGGACAAGCCCTTTGTGGGAGCCGTGACTGTGTTCT TCCTTCAGAAGCCG phase 0 ac022497.18 112859-112948 - CACCTACAGATCAACTGGACTGGCCTGACCAACCTGCTGGATGCGCCGGGAATCAA phase +2 ac022497.18 113525-113580 - TGATGTGTCAGACAGCTTACTGGAGGACCTCATTGCCACCCACCTGGTGCTGCCCAACCGTGTGACTGTGCCT GTGAAGAAGGGGCTGGATCTGACCAACCTGCGCTTCCCTCTGCCCTGT phase 0 ac022497.18 115000-115120 - GGGGTGATCAGAGTGCACTTGCTGGAGGCAGAGCAGCTGGCCCAGAAGGACAACTTTCTGGGGCTCCGAGGCAA GTCAGATCCCTACGCCAAGGTGAGCATCGGCCTACAGCATTTCCGGAGTAGGACCATCTACAGGAACCTGAACC CCACCTGGAACGAAGTGTTTGAG phase 0 ac022497.18 117259-117429 - TTCATGGTGTACGAAGTCCCTGGACAGGACCTGGAGGTAGACCTGTATGATGAGGATACCGACAGGGATGACT TCCTGGGCAG phase +2 ac022497.18 118253-118335 - CCTGCAGATCTGCCTTGGAGATGTCATGACCAACAGAGTGGTGGATGAG phase 0 ac022497.18 120475-120523 - TGGTTTGTCCTGAATGACACAACCAGCGGGCGGCTGCACCTGCGGCTGGAGTGGCTTTCATTGCTTACTGACCA AGAAGTTCTGACTGAG phase 0 ac022497.18 121019-121108 - GACCATGGTGGCCTTTCCACTGCCATTCTCGTGGTCTTCTTGGAGAGTGCCTGCAACTTGCCG phase 0 ac022497.18 121569-121631 - later pickup in bc037292 AGAAACCCTTTTGACTACCTGAATGGTGAATATCGAGCCAAAAAACTCTCCAGGTTTGCCAGA[GTGA phase0/+1 this is skipped in some mouse transcripts ac022497.18 121733-12175/121799 - start 2, earlier pickup in bx391691 GGGTTGGTCCTGTCCTGGGGCTCGCACAGTAATGACAGCCCAGGGGGACTGGGGCATTAGAGTAGCTTTCT CTCAAAGAGAAGTAACTGGGTGGCCCCAGTTCCCCCAGATGCTCCTGGGGGTTGGGGGTAGGACTGTCTCA AGCTGATATTGACTATGCCACCTTCACTGTTATGGATTTG]ATTCCTCACAG]AACAAGGTCAGCAAAGAC CCTTCTTCCTATGTCAAACTATCTGTAGGCAAGAAGACACATACAAGTAAG *** *** phase 0 ac022497.18 122157/122339/122350-122418 - ACCTGTCCCCACAACAAGGACCCTGTGTGGAGCCAGGTGTTCTCCTTCTTTGTGCACAATGTGGCCACTGAGCG GCTCCATCTGAAG[GTTTGATGGAAGAAGGGCTCTTGAAACAGAGTTAAGAGGTTTTTAAGCCAGGCGGGCTGGG *** AAGCTTGAAGTGCACCTTGAGCAGGTTCTCCTGGCAGCGTTTAAAGTCAGCCCCTTGTATGTAAGAGAGGACAC TGAGGCCCCACAAGGCCTCATCTCCTTAAGGCTAGTGCCTGAGGTCACTGTATAGGGGGATGTGGGAGGATAAA TCCTCAAGTCCCTTGACTTTCCCTGCAAAAGGGTCTTTATATTTGCTACACAGTACCCAGAGCAGCCTATCTAC ACAGGACATTAATAATGGTGTACTTTAAAAAATATATGTTTCATTTAATCTTCACAAAAGATCTGTAGAGTAAG CAAAGAGAGGCAAAAACAATGTCTTGTCCAAGATCTCATGACCAACAAGTGGTGGAGCTGGGATCTTTTAGGGC CCTGAGCCCTGCCTGGAGAGCAGCACAGCTCATCAGTCCCCAAAGCCCCCTGGCTCTGGGCATTTGACAGACTA GCTCATACAGATCATAATTGCCTCTACTCTGAGTCACTATCTTCCCTGACAGAAGACAAGGACCAGGTCTGGCC TGATCCCATTCTAGTTTTCAGAATAGGACCAGATGCCCATAGAAGCACAGTACAGACTGAAGTAAACCCAAACT TGGCTGGGGCTCAGATACTAGTAGTGGAGTGGTGGGGCTTGGTTATCCTCTTGTTTTGTGACTGGACCACTGCC CAG]GTGCTTGATGATGACCAGGAGTGTGCTCTGGGAATGCTGGAGGTCCCCCTGTGCCAGATCCTCCCCTATGC TGACCTCACTCTTGAGCAGCGCTTTCAGCTGGACCACTCAGGCCTGGACAGCCTCATCTCCATGAGGCTGGTGC *** TTCGG phase 0 ac022497.18 122974-123940 but 123061-123790 (not open) usually removed - readthrough in be967776 GTAAATCTCTCCGGTCCCCTGGGGGAGGGGAGGAATAGAGCTCTGGCAATGGAGCAAGGTGTACTGCCCCAGCA CTAAGCACCTGCTGTGTGCCTGGAAGAAGCCAGGAGATGGATTCATGTTTTTCATCAATTTTGAAATACTGAAT GGGAGCAAGTCAATATTCAAAGAGATACAGGCTCTTCAAATATTGCCTCTCCTCCATTCTTCTTAAATTCCTCT CTCTAGAATTTTCTATAATGTACCTTCTCATCTATCCTCCATGTCTCTTGACCTCAACTAAATATTTCCCTTCT CTGTATTCATGGTGGTACATTCTAATTCTCTCAAGAGCTATCTTCCAGGCCACTAATTCTTTGGCTATGCCTAG TTTGCTG ac022497.18 123941-124317 - mostly skipped TGTTCCTTTATGACCTGGATCGAGGTTGTTCTCTTCCAAGGAGCTTCTGCTTTTGCTGCAGCTCAGTACCTCAG phase +2 ac022497.18 124589-124662 - TTCCTGCAAGTGGAGGAACGAGAGCTGGGGAGCCCATACACAGGACCTGAAGCCCTAAAGAAAGGCCCTC *** TGCTCATCAAGAAAGTGGCTACCAACCAGGGTCCCAAAGCCCAACCTCAGGAAGAAGGCCCTACAGATTT GCCATGTCCCCCAGACCCTGCTTCTGATACTAAGGACGTATCCAGGAGTACCACAACCACCACCAGTGCT ACCACCGTTGCCACTGAGCCCACATCCCAAGAGACAGGCCCAGAGCCTAAAGGCAAGGACAGTGCCAAAA GGTTCTGTGAGCCCATCGGGGAGAAGAAGAGTCCAGCCACCATCTTCCTGACTGTCCCAGGTCCCCACTC TCCAGGGCCCATCAAGTCACCCAGACCCATGAAATGCCCTGCCTCCCCATTCGCATGGCCGCCCAAGAGG CTGGCTCCCAGCATGTCCTCGCTCAACTCCTTGGCCTCTTCTTGCTTTGACCTGGCAGATATCAGCCTCA # join to # below ACATTGA[GTATGCACCTCTCTGCTTAATCTTTTCTAAAATCGCCTGTATGAAAAATACCTCGCTGGATGG AAAAGTAGATATGAACTTACATTTCTGTGCAAGTTGTTTTTTCACAAAATATCTTCCTAAGAGGCAGCAT GGTGTGGTAGAAAGAACACAGGACAAGGGAGAGAGAGCCAAACAGGCTGTTTATGGCTCTAGCTGCGTAC TGACTATAAAATAGATGCTGGACTCTGGTTG[GTAAGGTCCCTTCCAGCAGAACCATTGAGTTATACTGGG *** ATGACATGGAAAGCTTAATATGTAGAATTATGTAATAAATGGCTGTCATTTATGAAGGGTTTACTATGGG CTTAGCATGTTACCTGATTTAATTCAACCTTCACAATAACCCTACAAGATGGAACTATCATAAAAGTTTA ATAAATTCATCCAAGGTCCCAAAAGGAATCATGATACAAAGGCAGATTCCACTTCAGGGTTCCCGTTCTT CCTACTATGAAGTAGGATAATTATACATGAATGCTGGATGGAACTGAATTCCATCTGAAAGTAAACTCAC TGTGAATTATTATCCTACATGGCTCTATACTCCTCAAGCAGGAATGCTTCTTTGTCTTTGGGGGTGGCGG *** # AAGAGGGCCAATGCTTGTTATGGCGAGAGAAGTGATGGGCTCTTTCTTTACAG]AGGTGGGGACCTCAGGC GACGGCAGCTGGGTGAGATTCAGCTCACAGTGCGCTATGTGTGTCTGCGGCGCTGCCTCAGCGTGCTAAT CAATGGCTGCAG phase +2 ac022497.18 125277/126450-125773/126007/126548 - readthrough in cf780889 GTAAAGGGATTCTAGGGCCAGGGAGGTCCTTTGGGAGCATCAGGTGACCATAAATCAGAGTAGGGACACTCAGAG CAATGAAAAGGGCACATAGTCCCAAGATAAATAACACTTTGGGGGAAAAATGAGATTTGAAGGCCTGAACACTGT AATCAAGTCCTCAAAGGGGCACTTTGGCCATCATTCTTCAGTGATGCTGATGGGCTCAAGAGCCAAGGGCTTTGC TCAGACGCAACCACTGCAAGACTGTCTGGAGTGGCTGGTAGCCAGTACATTTTCCAAGTGAGAATCTCAAACTTC CCTTAGAAGGAAAGTACTTGCTCTACTCCAAGCATTATAAAGATGCGTGTTATCAAAAACATTCATCTGATATTT TGTCCTCTAAATT ac022497.18 126549-126936 - later pickup in aj697972 AAACCTAACACCATGTACCAGCAGTGGAGCTGATCCCTACGTCCGTGTCTACTTGTTGCCAG]AAAGGAAGTGGG CATGTCGTAAGAAGACTTCAGTGAAGCGGAAGACCTTGGAACCCCTGTTTGATGAGAC *** phase +2 ac022497.18 127135/127197-127266 - readthrough in aa149621 GTAAGTGGGCTGGTGGCCTGCCTAGAGTGCCTCACCCATTCAAGTATTTTCCAAGTACCTGTTATGTTGCCTGGC AGCCTGCCAGATGCTGGAAGGGGCTATGGCTGAACAAGACAACATAGTCTATGACTTCATGAAGCTTCTGTACGT TAGTGGGGAAAATGGAGTGCCAGAGAAGTTTATCAAAATGGCCACCTACATTTACTGCTCATAGAGGCTAAAGTG TTCCTGAATATGGAATGTTCCCTACTCTTTCTGTTTAAATGAAGTCTCTCTGGTAGTAAAAAGATTTGAATGTTC ac022497.18 127267-127566 - ATTTGAATTTTTTGTTCCCATGGAAGAAGTAAAGAAGAGGTCACTAGATGTTGCAGTGAAAAATAGTAGGCCACT TGGCTCACACAGAAGAAAGGAGTTAGGAAAA phase 0 ac022497.18 129137-129242 - GTACTGATTGACTTATCAAAAGAAGATCTGATTAAGGGCTTTTCACAATG join to # below aj697972 phase +2 ac022497.18 129357-129406 - readthrough in bq435892 GTAAGTGTGCCCTTTCATTTTATCACTGTTATCCTGCTATTCAAGACAGTTTTCCCTTTTCAGTACT ac022497.18 129407-129473 - GTATGAGCTGACTCCAAATGGACAGCCCAGAAGCTGATGATGAGAATTCTTATCACTCACCTTTATATTAAAATGT *** ATATATATGTATATATTTTTTCCTTTGGATCACTTACATCCAATATATGTATATTTTGTCATTTAAATCAGAACAA CCACTTGAAATTATATACATACAATTCTTGTGTGGAATTTAACTCCATGACTGAATAGCATAAGGAAGAGGTTATT TAAAAGCAAGAACTA ac022497.18 129732-129974 - # ACTTTACAAGACCAAATATACTTCTCATCCCCTCCAACATTCCTGGACCTCCTCTTCTCTCTTACCAACACCAACA CTACCTGCCGTCAGTTTTCTGTCTCTGCCTCTGCCTTCACTGCCACTTTTCTGAAGCAGGGCAACATTCGAGAACA *** AAGTTTTGTCATGTTACTCTTATTCCAGTTTCCTGCCATCTGATTCACATGCAGATGTTCTATTCCAG AGTAGTCCAAATACTATGCTCTGCTGACTCAAGTCATGTCTCAAACCTATTTCCTCTATT AAGTAAGTCAGTCAATCCATAGTGAAATGGACTCTTCCTACCGCCTGTAGCATTTACTGT TGATACTGAGTATTTTCCATTTTAATAGTTCCCAGCCTTTATAACACTAAGTTTTAAGAA ATGTTGATTAGGCATCTGCTAAGGTTACATGCTAAGCAGCTACTTATATTGTATTTGGTA TTTAATTTTGTTTATTCTCCAGTTGAACAGTAGGGAACAATTCAAGCTACTTGAATTGTT TTTCACCCTCACCATCCAAGACCGTGTTAAGTACATAGAAGATGCATGGTGAAATTCGTT TCTGCTGAGGTTTCTATTTTAAATGGCAAATTCTCATAATAAAATGGAGCATTGATGCCT ------ ACCCTGTCTACCTTATGATGGCATTCTAATTGCCCCCTAAATAGACAAGTGCCTTGAAAA TGGAGAAGCACCAGAGAAATAAGGGAATGTATCATATGTACATCGAAACATTAGCAACCC TAAAACAGCTAATCAAAATGGCAGATAAGTGAAAACCTACCCCTCTTCTTCCAAACTTAA ACCACAAACATTTATTTTAAACGTGGTCAATTGAACCGTTTTTACCTGTGTCAGGCAACA CAGGTAAATACCTGGTGATGGTCTGAAGAGGAGTTAAAATGTTGAAGGGAACCAGAATTT TAGTACACAGCAGACAGGAGGCAAGGTTATATAGGCGCTGTGTGAGGGGCAGGGAGCCTG AAAAGTTGTTAATACCTTGGCTGCCACTGAGGACAAGAATTGGTTTTCAGCAGTGGGTGG AAACAATCAGCTAATATGCAGGAGCATAGGGTCTGAAGTTAACATCATCTTGGTACAGAA ACCCCCAAACCTAAGACGGAATGTGAATATTGGTTTAGAACCTGGAAGCCTGTGAAGCCT TGATGGAGGCAACCATAAAATTGGCCCCACAGGGTTGCCACTCCCATCCAGGGCACATAT GCGACAACTGCAGCAGATGGCTGTCACTAAAGGGAAACTCACGGGCAAAAATAAATTATG AAACAAAACAAAAACAGACTTTAAAAAAAATACAAAGTACACAGGAATATCAAACTGAAA AATAGCCATAGATAATATTTCAGCCAGAAGGAAAATGTACCAGTAAGGCAGAAATAGCAT GTGAGAAGCAGTGGAAAGCAAAGAAATCCATAAAATACATTGGCAAACCTAAGCAAGTTT TGATGATGATTGTTCACAAGATATAAACAAATAACCAAAGATTTTTGCAAGGGTTCAGAA ACATAGTAGAACTAAAATGTTAGTACTAACAACTAAGAAGGGGCAGCTAGGCTGATTAAG AAAGTAAGTATTCAAGACCATATCTTATTTAGGAAGCTAAAGATACTCATCTTAAAAATA TAACTGTGTCAGTCACTAATTCATTACCTCTCAGCTTCAAATTGACGTCTGTCTCCTTTG CTGCTTTCCCGGCAGGCTGATGTTTGGCTTTGCCAATAGGGGGCGATGGAAGGACACTCT ATAGCAGGAAGAAGGGGCTTTTCTTCTGATGTTTTCCATGGCTGCTAGCTAATTGGCATA CAGAGCTGTTCTCAATCAATCACCTAAGTACCCCCACAGTTTACCCTTGGCTCATGGCCT TCATGTTTTATCAGCAGGCAACACCTTTTGGCAAGTTTCTTAGCCACAAGTGGGTTGCAT GGTCCTATGGCTGCCAGCGGAAATCTAAATCTCAGCCTGGTAGGGAGGCACTTAGTTTCT AACTTCCTTTCTTGTTCACTCTCCCTTACCCCTGGGGGTAAGGATCTGCATCCTGAAGTT GATATTCTGTATCCCCTAGAGTCCACTTCTACCCCGTTTAGTAGTAAATACAAGAATTGC TAACTAGTAAAAGGTGGTTAAGTTTTTCATGTTTGGTTACCTGTGCAATGTGGTTTCTGT CTCCTAAGTATGTATTCAAAATTGCAAGATAACTATGAAAATAGAGTAATAGCAGAAAGC CAATAAAGTTGATATATACAACTTCCAAATTAGCAGTGAAGAAGAAAAGGTTATAAAGAA AAATCAACCCTGCAAAACGTAGGAGGGGAAAGCAAAGACATAGTAGACAATACAAAAGAT GGTCAAGATACGTCTAAATATATTTGTAATTACAATAAACAACACTATTAAAATCTAGAA ------ TGTCAAAAGTAAAAAGCAGTTATATGCTGTTTATAAGAGGTTCACATGAAACAGAAATGT TGAAAGTAAAAAGATTAAAAGATCCATCCAAGAATCATTTAGATTTCTGTTTATATTAAT GGCAGCAAACAATATATTAAGAAACAGATGCTCCCTATTGCCACTTCTGTTCAACAATGT ATTGCAGCCTGAGTAATAATAGGGCAAAAATAGGTACATCTAACCAAAACTTCTATGTGC AGATGATATGATCATGAGCATGAAATCCAAGATAATCTAAATTGCTAGAATTAACCAGAA AGTCTTCAGCAAGCTTGCTTGATACAATGTTAAAAAAACTGTAGTTCTGTTCCCTAAGAG AAAATAAGTGCATAAAAATATCAATCTATATGAATACATTCAACAACCCCTATAAGAAAA CTAAAACTTTTTAAATAAATGTTAAACCTAAAATGGAGAGCTATGCCACGTTTGAGGTTG GAAAACCCAACAAATGCCATTTCTCTCCAAATTAATTATATGTTTAATGAAAGCCCAATA AATCAACAGGTTGTGTGTGTAACTTGATAAGCAGATTCAATGTACATGGAACTACAAAAG GTAGAAAGCCGCCTACTCAACGCCAAAGTTCATTTTCAAGCTGTAATAACTAAGACAGAA TGGTACTAGTGCAGGGAGCCAACTGGGCCAAAAGAACAGAAAAGAGCCCAGAAACAGACC CATTCACATATACTCAATTTATGACAGAGGTAGCACTGTGAACAAAGGGAAAAGATAGAC TTTTCAATAAAAGGTGCTGGGACAATTGGATATTCATGTGAGAAAATACGAAATGGTCCT TTACTCATATCACATTAAAAAATCAATCAACTCCAGGTATATTAGACTGTGTAAAGCAAA ACTATACAGCTGTAAGATAATATAGGAGAATAATTTCACAACTTGTGACTAAGGCAAGAT TTCATAACACGCAAAGAGCACTAACTAAAAGACCACACATCTCTCCGTGAAAATTAGGTA CTTCTGTTCATAAAAATAAACTATAGGCTGGTGCGGTGGCACACACTTTTAGTCCCAACT ACTTGGAAGGCCGAGGTGGGAGGGACCACTTGAGCCCAGGTGTTCAAAGGCCAGCCTGGG CAACACAGTGAGATCCCATCTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCACCCAGGC TGGAGTGCAGTGGCATGATCTCAGCTCACTGCAACCTCTGCTTCCTGGGTTCAAGTGATT CTCCTGCCTCAGCCTCCTCAGTAGCTGGGACTACAGGCACATGCCACCATGCCAGGCTAA TTTTTTGTATTTTTAGCAGAGACAGGGTTTCACTGTGTTAGCCAAGATGGTCTCGATCTC CTGACCTCGTGATCTGCCCGCCTCGGCCTCGCAAAGTGCTGGGATTACAGGCATGAGCCA CCACGCCCGGCCGAGATCCCATCTCTTTAAAAAACAAAAAACAAAAAACAAACAAAAAAA ACACTATGGGAGGGCCGGACACGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGTC AAGGCAGGCGGATCACGAGGTCAGGAGATGGAGACCATCCTGGCTAACACAGTGAAACTC CACCTCTGCTAAAAATACAAAAAATTAGCAGGGCATGGTGGCACGCGCCTGTAGTCCCAG CTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAGTGAG CCGAGATCCTGCCACTGCATGTCTC ac022497.18 130688-134892 -------------------------------------------------------------------------------- 122. Homo KIAA1228 Chromosome 7 Abundance High Transcript complexity affecting Nterm and other regions MTPPSRAEAGVRRSRVPSEGRWRGAEPPGISASTQPASAGRAARHCGAMSGARGEGPEAG AGGAGGRAAPENPGGVLSVELPGLLAQLARSFALLLPVYALGYLGLSFSWVLLALALLAW CRRSRGLKALRLCRALALLEDEERVVRLGVRACDLPAW^ VHFPDTERAEWLNK^ TVKHMWPFICQFIEKLFRETIEPAVRGANTHLSTFSFTKVDVGQQ^ - alt. Nterm PLRINGVKVYTENVDKRQIILDLQI^ SFVGNCEIDLEIKRYFCRAGVKSIQ^ IHGTMRVILEPLIGDMPLVGALSIFFLRKP^ LLEINWTGLTNLLDVPGL^ NGLSDTIILDIISNYLVLPNRITVPLVSEVQIAQLRFPVPK^ GVLRIHFIEAQDLQGKDTYLKGLVKGKSDPYGIIRVGNQIFQSRVIKENLSPKWNEVYE^ ALVYEHPGQELEIELFDEDPDKDDFLG^ SLMIDLIEVEKERLLDE^ WFTLDEVPKGKLHLRLEWLTLMPNASNLDK^ VLTDIKADKDQANDGLSSALLILYLDSARNLP^ [SNPLEFNPDVLKKTAVQRALK] SGKKISSNPNPVVQMSVGHKAQESK^ IRYKTNEPVWEENFTFFIHNPKRQDLEVE^ MILVMPVFPPCVLQ]VRDEQHQCSLGNLKVPLSQLLTSEDMTVSQRFQLSNSGPNSTIKMKIALR^ - alt. Nterm VLHLEKRERPPDHQHSAQVKRPSVSKEGRKTSIKSHMSGSPGPGGSNTAPSTPVIGGSDK PGMEEKAQPPEAGPQGLHDLGRSSSSLLASPGHISVKEPTPSIASDISLPIATQELRQRL RQLE^ NGTTLGQSPLGQIQLTIRHSSQRNKLIVVVHAC^ RNLIAFSEDGSDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQ^ SFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGK^ VLVALASEELAKGWTQ^ WYDLTEDGTRPQAMT - start1 GTATCCACCCCGCCCGCTCCCGGTGACGTGCCAGCCCCAGGCCCACGCCGCTCCCGCCCCGCGTGATGAC *** GCCACCGTCCCGGGCGGAGGCGGGCGTGCGGCGGAGCCGCGTCCCCTCAGAGGGGCGCTGGCGCGGGGCT GAGCCGCCCGGGATCAGCGCGAGCACCCAGCCCGCCTCGGCCGGGAGGGC%AGCGCGGCACTGCGGGGCG ATGAGCGGCGCCCGGGGCGAGGGCCCGGAGGCGGGCGCCGGCGGGGCTGGGGGCCGCGCGGCGC%CTGAG AACCCCGGGGGCGTGCTGAGCGTGGAGCTGCCCGGGCTGCTGGCGCAGCTGGCGCGGAGCTTCGCGCTGC TGCTGCCCGTGTACGCGCTGGGCTACCTGGGGCTCAGCTTCAGCTGGGTTCTCCTCGCGCTCGCGCTGCT CGCCTGGTGTCGCCGCAGCCGCGGCCTCAAGGCCCTGCGCCTGTGCCGCGCGCTGGCGCTGCTGGAAGAC GAGGAGCGCGTCGTGCGCCTGGGGGTGCGCGCCTGCGACCTGCCCGCCTGG phase 0 ac019084.9 (197112-196574) deletion between % in ab033054 (196922-196840) - start2 AGAACCTTGTTTCCTCTTTGGTTTGATGGGGGTTGAGCCTGACTCTGTGCTGTGGTTGTGAGGCTGGAAT GCGGAGAGGCCAGTGAACACACTGGACATGGGCGGGCAGGGAGGCATGTCCTCGGGTCAGCCGTCTGAGT CACAGGCCCAGAGATGCCCAGCTGTGACCAGTGCTCCGCTTGCAG atypical gc intron donor ac019084.9 (186235-186051) - GTTCATTTTCCAGACACTGAAAGAGCAGAATGGCTAAATAAG phase 0 ac019084.9 (166557-166516) - ACTGTAAAACACATGTGGCCTTTCATTTGCCAATTTATAGAGAAGTTGTTTCGAGAAACTATAGAACCAG *** CCGTGCGGGGAGCAAACACCCACCTTAGCACCTTTAGTTTCACGAAGGTCGACGTGGGCCAGCAG phase 0 ac019084.9 (165561-165427) - CCCCTCAGGATCAATGGTGTTAAGGTATACACTGAAAATGTAGACAAAAGGCAAATTATTTTGGACCTTC AGATTAG phase +2 ac019084.9 (161211-161135) - TTTTGTAGGAAATTGTGAGATTGATTTGGAGATCAAACGATATTTTTGTAGAGCTGGTGTGAAAAGTATC CAG phase 0 ac019084.9 (155902-155830) - ATTCATGGTACCATGCGGGTGATCCTGGAACCGTTGATTGGAGATATGCCCTTAGTTGGAGCTTTGTCTA TCTTCTTCCTTAGGAAACCA phase 0 ac019084.9 (155578-155489) - CTTTTAGAAATTAACTGGACAGGACTGACGAATCTTCTGGATGTCCCTGGATTGAA phase +2 ac019084.9 (140881-140826) - TGGTTTATCAGATACTATCATTTTGGATATAATATCAAACTATCTGGTGCTTCCCAATCGAATCACCGTT CCACTTGTCAGTGAAGTTCAAATAGCTCAGTTGCGGTTTCCTGTACCAAAG phase 0 ac019084.9 (135259-135139) - GGTGTTCTAAGGATACATTTTATTGAAGCTCAGGATCTTCAGGGGAAAGACACTTACCTTAAGGGACTTG TCAAGGGAAAGTCAGACCCCTATGGAATCATTAGAGTTGGCAACCAAATCTTCCAAAGCAGAGTCATCAA GGAGAACCTCAGTCCAAAGTGGAATGAAGTCTATGAG phase 0 ac019084.9 (132338-132162) - GCTTTAGTGTATGAACATCCTGGACAAGAATTAGAGATTGAGCTCTTTGATGAAGACCCAGACAAGGATG ACTTTTTAGGAAG phase +2 ac019084.9 (130650-130568) - TCTTATGATTGACCTCATTGAAGTTGAAAAGGAGCGCCTTTTAGATGAA phase 0 ac019084.9 (129029-128981) - TGGTTCACTCTGGACGAGGTTCCCAAGGGGAAGCTACACTTGAGACTGGAGTGGCTCACGTTAATGCCAA ATGCGTCAAACCTCGACAAG phase 0 ac019084.9 (127632-127543) - GTGCTAACAGACATCAAAGCTGACAAAGACCAAGCCAACGATGGTCTTTCCTCTGCATTGCTGATCTTGT ACTTGGATTCAGCAAGGAACCTTCCG phase 0 ac019084.9 (127066-126971) - can be skipped [AGTAACCCATTAGAATTTAACCCCGATGTCTTGAAGAAGACTGCAGTTCAGAGAGCTTTAAAG] phase 0 ac019084.9 (120328-120266) - TCAGGGAAGAAAATAAGCAGCAACCCAAATCCTGTTGTCCAGATGTCAGTTGGGCACAAGGCCCAGGAGA GCAAG phase 0 ac019084.9 (117208-117134) - ATTCGATACAAAACCAATGAACCTGTGTGGGAGGAAAACTTCACTTTCTTCATTCACAATCCCAAGCGCC AGGACCTTGAAGTTGAG phase 0 ac019084.9 (115765-115679) - start 3 ak124091 TGTGTCTTTGTTAGGAGATTTCATACCATGTTAATCATTATGGAAACACTACTTAAGAGAATATGGCTGA AATATGTTTGGGTTTTTAAAAATATCTTTCTTACAGACTAATATTGTCTGTGGACCTTTCTACATTTGTT TGTTTGTTTTTGAAACAGTTTTGTCACCCAGGCTGGAGTGCAGTGGCGCGATATCAGCTCACTGCAGCCG CCTCCTCCCAGGTTCAAGCGATTCTCATGCCTCAGCCTCTTGAGTGGCTGGGACTACAGGTGCGCGCCAC CATGCCCAACTAATTTTTTGTATTTTTAGTAGAGATGAGGTTTCACCATGTTGGCCAGGCTGGTCTCGAA CCCCTGGCCTCAGGTGATCTGAGCCTCCCAAAGTGCTGAAATTACAGGCGTGAGCCACCCCACCTGGCCC CTTTCTACATTTTCTAAGTTCCTATCTCTGAGGACAAAGGGTCAGGAGCGTAGACAACGTAGAAAGGTTC TGCAGACATGATCCTAGTTATGCCAGTGTTTCCACCCTGTGTTTTGCAG]GTCAGAGACGAGCAGCACCA *** GTGTTCCCTGGGGAACCTGAAGGTCCCCCTCAGCCAGCTGCTCACCAGTGAGGACATGACTGTGAGCCAG CGCTTCCAGCTCAGTAACTCGGGTCCAAACAGCACCATCAAGATGAAGATTGCCCTGCGG phase 0 ac019084.9 (111702/111163-111014) - start 4 GAAATATTGAAAGTAAAACTGGCAAACATATGGGGAAATACTAAAACTCATGAATCAAAGAAATGCAAAT TAAAATAAAGAGCCAGCTTTTTAAGAAAATTACAAATGTCTTCTATTGAGGGGGCAATGGGAACAGCCTC CTTGCCCCGGCAGAGACTGGAGGTGTCGCACACCTCTCCAGAGGGAGCTGCGACAACCCTGAGCCACTCA TCTGAAGGCTCCTTGGCCTTTCTTCTAGAAACCTGACTTTTGTTTTGGTGATACAAAGTGTGGGGAGACC AGGAACATAAAGATGTTCACCGCAGCGTTATTTCCTAAAACCAGAAAAAACCTTTAAGCTGTCACGTGAG TGGAGTGATTTACAAGGTGTGGACTCTGCTCAAGCCAGCCCAGGGACCAGCTCATGTGCTCACACAACTG GGAGACCCCAGGCCCTGCGGGAACCCCCTGCTCCTGCACTCATGTCAGGTTGTTGGGGTGATCTTGCTGG ATAGCAGGGGTTCTGGACTTTCTTCCTCCCTCTGGGGACGCCGGGTGGAAACCCCTTATGTAGAATACGG GCTTTGGTCTTGTGTCGAGGAAATGCGACTCTGGGCTCTTGATGTAAAAACATTGTCCCACAATTGTGTA GAAATACATGGAAACGGAAGAGACTAGAGGAATACGCAGAA join to # below ac019084.9 (110548-109878) - GTGCTCCATCTCGAAAAGCGAGAAAGGCCTCCAGACCACCAACACTCAGCTCAAGTCAAACGTCCCTCTG TGTCCAAAGAGGGGAGGAAAACATCCATCAAATCTCATATGTCTGGGTCTCCAGGCCCTGGTGGCAGCAA CACAGCTCCATCCACA%CCAGTCATTGGGGGCAGTGATAAGCCTGGTATGGAAGAAAAGGCCCAGCCCCC # TGAGGCCGGCCCTCAGGGGCTGCACGACCTGGGCAGAAG]CTCCTCCAGCCTCCTGGCCTCCCCAGGCCA CA%TCTCAGTCAAGGAGCCGACCCCCAGCATCGCCTCGGACATCTCGCTGCCCATCGCCACCCAGGAGCT GCGGCAAAGGCTGAGGCAGCTGGAAAA phase +2 ac019084.9 (109381/109133-109008) deletion between % in ak126214 (109225-109102) possibly due to inverted repeats in DNA (positions 109086-109265 and 109715-109840 ) making a stem loop structure - CGGGACGACCCTGGGACAGTCTCCACTGGGGCAGATCCAGCTGACCATCCGGCACAGCTCGCAGAGAAAC AAGCTTATCGTGGTCGTGCATGCCTGCAG phase +2 ac019084.9 (106606-106508) - second pickup used in ak026710 AAACCTCATTGCCTTCTCTGAAGACGGCTCTGACCCCTATGTCCGCATGTATTTATTACCAG]ACAAGAG GCGGTCAGGAAGGAGGAAAACACACGTGTCAAAGAAAACATTAAATCCAGTGTTTGATCAAAG phase +2 ac019084.9 (104664/104602-104533) - start 5 AACTCAGTTTTATAATAAAAAACAAACATGACATTTGGAATGATCTCATGAGCAGAAATGCCATTTTTAG TTATAAGAAAATACAGCAGAATGATGGATAAAGTAAGGCTCTCGTTTCCTATTTCAG]CTTTGATTTCAG TGTTTCGTTACCAGAAGTGCAGAGGAGAACGCTCGACGTTGCCGTGAAGAACAGTGGCGGCTTCCTGTCC AAAGACAAAGGGCTCCTTGGCAAA phase 0 ac019084.9 (103220/103093-102988) - GTATTGGTTGCTCTGGCATCTGAAGAACTTGCCAAAGGCTGGACCCAGTG phase +2 ac019084.9 (101956-101907) - GTATGACCTCACGGAAGATGGGACGAGGCCTCAGGCGATGACATAGCCGCAGCAGGCAGG *** AGGCGTCCTCTTCAGCGTAGCTCTCCACCTCTACCCGGAACACACCCTCTCACAGACGTA CCAATGTTATTTTTATAATTTCATGGATTTAGTTATACATACCTTAATAGTTTTATAAAA TTGTTGACATTTCAGGCAAATTTGGCCAATATTATCATTGAATTTTCTGTGTTGGATTTC CTCTAGGATTTCGCCAGTTCCTACAACGTGCAGTAGGGCGGCGGTAGCTCTTGTGTCTGT GGACTCTGCTCAGCTGTGTCCGTAGGAGTCGGATGTGTCTGTGCTTTATTATGGCCTTGT TTATATATCACTGAGGTATACTATGCCATGTAAATAGACTATTTTTTATAATCTTTACAT GCTGGTTTAAATTCAGAAGGAAATAGATCAAGGAAATATATATATTTTCTTCTAAAACTT ATTAAATTCGTGTGACAAATAATCATTTTCATCTTGGCAGCAAAAAGTTCTCAGTGACCT ATTTTGTGGTGTTTCTTTTTGAAAAGAAAAGCTGAAATATTATTAAATGCTAGTATGTTT CTGCCCATTATGAAAGATGAAATAAAGTATTCAAAATATTAACATTTTCATAAATATAAG ------ GATGTATTATTGAGAAGTAAGTTGAAGGGCTTATAAGGAAAAATGTTTTATAACTGAGTA ATATATTAAGAGAATTGTCATGGTTCATAAATCACATTATGCTAATCTGAAATTTCTTAC ATAAAAATGAAGTGTCTTATGTTTATTTTAATTGCTGTTGTAACTTACTCATGAAACAGT ATACAGACACCTTGTACTTTTCCTCAACTGTAAGAGCAGACTTTCAATGTTAGCAATTAA GCTGTTGTCAAACAATCAGTCATGAGCTTTGTTAATTTTCAATGTTTTCCCAGCCTATAA AAAAAGGAAGGTACACGTTGTCCTTTTAAAGGTTGTGAGGTAGATTGGAGTGAGTAGACA GGATATTGCATTAAAAATTGAAAGCTCGATCTCATTATTGTCAGGAACCCCCAGTGTGAC CTCACACATAGGATGTGGGACCTTTGAGCCGATGTGCACTGGCCACCACCAGGGTTGGGG GCGCCACAGCTGCGAGCCCGGCCCCTGCTGTTCTCAGCAGCCACTTCCCAGGCTGCCTCA CTTTATGCCATGACTGACCTTAATATTGGGATATTGTTATGCAATTTTTATCCTGTTTAG ACTGTTAAAAGCAGGTTTCTGTACTTAAGAGTCCCCCAGACCTCCTGTGAGGTGAGGCTC TGTTGCAGTGTCGTAGGCTGTGTGTGTCTGTAAAGAAAGAATGCACATATGTAGACGATT AAGTGTATATTATAAGCTATATGCTGAAAATGGCTTCCATAGCCATGAGAACATCTTAAA ACTATGTGTAAATATATTAAGGAAAGTATAGCTTTGTAATTTAAATTGGAGCTTTTAGCT TGTTTCATGGAACTATACAACTTGTGGGTAACTCACATGACCAAACAAACCAAAGTGCCT GTGACGGGGCGGGTGGCGTCTACCCACCCTCCCTTCTAGCAGATTCTTATTTTGTTTGAA TTTATAAACAAGGCTGGTGGCTGTCTACCCACCCTCCCTTCTAGCAGATTTTGATTTTGT TTCAATTTATAACTTACACTTTGAACCATGGGTTTACTTATAATGGAGTCTGTAGCTTCA CAGCATATTTCATGTAATCATAAAGACCAGTATATTCCCTCCTGCTGAATGACATGCGAC TGTAAAGCCTCTTTATAAACCATTTCCAATGTTAGTATATAGGATTATTTGGGAAGCGTA TCAATACCTTTATAGACAAATACGAACATGTATGCACACAAAACATTTAACTATGGTATT TATGGAAGACAGGTAACAACATTAAATCTAGTTGCTTTCCCTTAGTATTAGATTTGTTGA GGGTTTTTTAAAAATCAGGTCTGTTGAAAGTCTTCTGTCATAATCTATAAAGCAGCAGCA CTCATGGAAATTGTAGCATGCCAGTAATTTTTACCAACATCCCATACATCTGAGTTCTGC AGTCCAGTGTGTAATCCGCTCCATGTGTATTTTGCTTAATGGAATGCTTTATTTAAGCAC TTAGGCAGAGTAGACACAATTAAAGGTACAAAGCCCAGAGGAAGTGGTAGAGCAGCACCG TGCCTGCCCTGAGGCAGTGGAGTCAGTAGCGCTGTCCCCAGGGCCTTGAGTGCCTGGAGG TGCTTGGCCTCCAGTAGCTGCCTCCATTCTCTTTTAAAAAAAGGGGGTGATTCTGAGGCA CTGAAGTGCCTCCCAGATGTGGAGGAGTGAAGCCACCATCGAGGCCACACTCAGCACTCC AGGATCCCAGCGATGTCAGACACTCTTGAGTTGTCAAAACGTTAATTTTCAGTTTTAAAT AATCAGTTTATCTAAGAAAAGGGAATTTTAACTTTTCTACCTTGAGCCAAGCCAATGAAG GGAAAATTAATTAACTTAGTAAATTTGAAGTGCAGCTCTGTTAGCTCGTACATGTGGGTT CTTATCCTGATCCTGTGCCTTAAAGTAGGAAGGTGTTTCCAAGTTCAGATTAAAATAGAA GCAGCTGGCCGGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCG GGCGGATGACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGAGAAACCCCATC TTTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGTGGAGCGCACGCCTGTAGTCCCAG CTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAG CCAAGATCGCACCACTGCACTCCAGCCTGGGCAACAGAGTGAGACTCCGTCTCAAAAAAT AAATAAAATAGAAGCAGCCTTGTAACTGTATTTACCATGATAATATATTCTGCACGGTAA GAATTCCTTTTACAGACATTCTTTATCAAGAGGTCGGCCCTTCTTTTTCAGGCACATAAG CCAAATGCAGGCCTGTGTGTAGCTGTGTGTTTTTTCTGTGGTTGCCGCATTTATTCCACC TCCAGCTGGACCCCCCACTGCAAATAGAGAACAGCGGTGGGGGATGGGGGTTAAAAAGTA GAGAACCTCCTTTCTGTTCAACTAATTTCACGTGACAGTGCATGTATTTATTCAATAAAA ------ CCTTTATGTTAGCTCA ac019084.9 (101737-98482) -------------------------------------------------------------------------------- 123. Saccharomyces Tricalbin3 chromosome 13 Gene prediction from Saccharomyces cerevisiae chromosome XIII sequencing project barrell@sanger.ac.uk MTGIKAQVHPPPDSTLFHEEEKKKVGGNLPQKVINQQERGSDHAPSGHHQYHQLINHDANDTKTSNSVSD VSKGQKTADSNPEGKKQSSKDIFVASSAQKTNQLPGPNPQGSIGAVPLEGLRPKEFRSAPSRKPNKFDTS ITKPGVLDDLGKLDEKDIKEKFHLDSDDKLFPWQNVGEFHASGKGSPNTKMSRVIKAYILENFYNDWYCN IATVLGTCFFSWLFAYIGFSWWSMIFIFLGTATVYNAEYTRFNRNIRDDLKRVTVEETLSDRVESTTWLN SFLSKFWVIYMPVLSQQVKDNVNPQLAGVAPGYGIDALAIDEFTLGSKAPTIKGIKSYTKTGKNTVEMDW SFAFTPSDVSDMTATEAREKINPKISLGVTLGKSFVSKTMPILVEDINVAGKMRIKVEFGKAFPNIKIVS LQLLEPPLIDFALKPIGGDTLGLDVMSFLPGLKSFVKNIINSNIGPMLFPPNHLDINVEDIMAAQSKEAI GVLAVTIASADSLKGSDFITNTVDPYIVMTTEDAVPGTDEEVRTSIKSNVKNPRWNETKYLLLNTLEQKL NLKCFDFNDVRKDTVIGDLQLDLADLLQNPVLDNQTAELRSGTKSKGILHYSLHWFPVKEDKSEEKAVER AEAKAKGKKEDENEDTTEKEEDENEESSQTDVGIAKITLQKVKYLDTTSSMTGSLSPCAELFIDGQKVKS YRTLRRINEPSWNETIEVLVPSKSNSKFVLKIFDDRMNGKALICEYSSSLDDIMTTLDTAQEFVKGSPQG DIYLDVSWKSIEMTGAFAAANSVSEPIGCIKLDVKDAIIKGDLSGVGDVDPYYTVSLNRRVLYKSIYHSD TDHPIFDNSTYVPIFSPNQILTLEFHDYQKIGKDRFIGSVQIPTSNVFKKDPKSGKYVGNNGKEEISKLK LKDHEHKVTESIVNVSTTFIPINLVYSPEELVNVEKLEKELKEKKKKFEATQEENEQEMEKNPKEWEVAE IEDPFDSDEKKINRKAKLSLNELIKQKSGILSMQILEGTLSPSSAYLEILADDISYPVFICMKPSQGKLN SEMANIFIRDLNYSKLHFRVSKKHIAKDSDDVISETSYSTLKLLKQAYEEPMWLNFNGSKMKVRFLYTPT SVKLPSSESVEDTGYLNIKLISGHGLKSADRNGYSDPFVHIFVNDKKVFKSNIKKKTLDPVWNEDAKIPI LSRSKNQVIFNVLDWDRAGDNDDLGQASLDVSSLEVGKTYNWNLNLNTQGSIKLQGSFNPEYIKPSFDIV KGGITDKPMKIASGAAHATVGIAGTGIGAATGVATGGLKKGGHLLKSLGGNPMKRSKSSNGNESNGAKKS SEKKSFDRRSPSNLNSTSVTPRASLDYDPSVPNTSYAPVQSASPVVKPTDNTSSSSNKKDTPSSNSRGHS RASSFARTLAPHGTYNGFITVVAAENVAKHVQIKISLTQGGRLKHIYKTKSQKANNDGVAVFDEECSFKA SPEANLVLGAISHQRLSRDKDLGIAQINLGDPQIQQDGQISVKLGDGHLIVKINYGKDKNGQVPPVPEVP QEYTQ - ATGACTGGCATCAAAGCTCAAGTCCATCCCCCACCTGATAGTACCCTATTTCATGAGGAGGAGAAGAAGA *** AAGTAGGAGGCAATTTACCTCAAAAGGTCATAAATCAACAAGAAAGGGGTTCTGATCACGCTCCATCGGG TCACCATCAATACCACCAACTGATTAACCATGACGCAAATGACACAAAGACCTCAAATTCAGTTTCTGAT GTGTCTAAAGGTCAGAAAACTGCTGACTCCAACCCGGAAGGTAAGAAACAGTCATCAAAAGACATATTTG TTGCCTCCAGCGCTCAAAAAACCAATCAATTGCCCGGTCCCAACCCACAGGGAAGCATAGGAGCCGTGCC ATTGGAAGGTTTACGTCCGAAGGAATTCAGATCAGCACCATCTAGGAAGCCAAATAAATTCGACACTTCG ATTACTAAGCCTGGCGTCTTAGACGACTTAGGCAAACTTGATGAAAAGGATATTAAGGAAAAATTTCACC TAGATTCCGACGACAAGTTATTTCCATGGCAAAATGTTGGTGAGTTCCATGCTTCAGGAAAGGGTTCGCC AAATACAAAGATGTCCAGGGTTATAAAAGCTTACATTCTGGAAAATTTTTATAACGATTGGTACTGTAAT ATAGCCACCGTTCTTGGAACTTGTTTCTTCTCATGGTTATTTGCTTACATTGGGTTTTCATGGTGGTCTA TGATATTTATCTTCTTGGGAACTGCGACCGTTTACAACGCAGAATATACAAGATTCAACAGAAATATCAG AGATGACTTGAAAAGAGTTACAGTCGAAGAAACCTTGTCGGATCGCGTTGAATCCACTACGTGGTTGAAT TCATTTTTATCAAAATTTTGGGTGATTTACATGCCAGTTTTATCTCAACAAGTCAAAGATAACGTTAACC CTCAACTGGCAGGTGTTGCTCCAGGTTACGGTATCGATGCGTTAGCTATCGATGAATTCACTCTGGGCTC TAAAGCTCCCACCATAAAAGGTATTAAATCGTACACCAAGACTGGTAAAAACACTGTTGAAATGGATTGG TCATTTGCATTCACCCCAAGCGATGTCTCGGATATGACAGCTACTGAAGCTAGGGAGAAGATCAATCCAA AAATATCTCTGGGTGTCACGTTAGGAAAAAGTTTTGTCTCTAAAACAATGCCTATTTTGGTTGAAGACAT TAACGTTGCTGGTAAAATGCGTATTAAAGTTGAATTTGGTAAAGCTTTCCCAAATATCAAAATTGTTTCT TTACAACTTTTAGAACCACCTTTGATTGATTTCGCACTGAAACCAATTGGTGGTGATACTTTAGGTCTTG ATGTTATGTCATTCTTGCCTGGTTTGAAGAGTTTTGTTAAAAACATTATCAACTCCAATATAGGGCCTAT GCTATTCCCTCCGAACCATTTGGATATTAATGTTGAAGACATTATGGCTGCTCAATCAAAAGAAGCTATT GGTGTCCTTGCCGTAACCATTGCTTCTGCCGACTCTTTGAAAGGCTCAGATTTCATTACCAATACTGTCG ATCCTTATATTGTTATGACTACCGAAGATGCTGTGCCTGGTACAGATGAAGAAGTGCGTACATCTATCAA ATCAAATGTTAAAAATCCACGTTGGAACGAAACCAAATATCTATTATTAAACACCTTAGAGCAAAAGTTA AACTTAAAGTGCTTTGACTTCAATGATGTAAGAAAAGATACCGTAATTGGTGATCTTCAACTTGACTTGG CAGATTTACTACAAAACCCTGTTTTGGATAATCAAACTGCTGAATTAAGATCCGGTACAAAATCAAAAGG TATTTTACATTATTCCTTACACTGGTTCCCTGTGAAAGAAGATAAATCAGAGGAAAAAGCAGTTGAGCGT GCCGAAGCTAAGGCCAAGGGCAAGAAAGAAGATGAAAACGAGGACACTACTGAAAAAGAAGAAGACGAGA ATGAAGAAAGTTCTCAAACTGATGTCGGGATTGCCAAGATCACTTTACAAAAGGTCAAATATCTGGATAC AACCAGTTCTATGACCGGTAGCTTGAGCCCATGTGCTGAATTATTCATTGATGGACAAAAAGTAAAGAGC TATAGAACTTTGAGACGTATCAATGAGCCATCTTGGAATGAGACCATCGAAGTTTTGGTTCCATCAAAAT CTAACTCTAAGTTTGTCCTAAAAATATTCGATGACAGAATGAATGGTAAGGCGCTGATCTGTGAGTATTC ATCTTCTTTAGATGATATAATGACTACTTTAGACACTGCTCAAGAGTTTGTTAAAGGCTCACCACAAGGT GACATTTATTTGGATGTTTCTTGGAAATCAATTGAAATGACCGGAGCTTTTGCCGCTGCAAACTCTGTAA GCGAACCTATTGGTTGTATTAAGCTAGACGTTAAGGATGCCATTATCAAGGGTGACTTATCCGGTGTAGG GGATGTTGATCCATATTACACCGTATCGTTGAATAGACGTGTTCTTTACAAGTCCATATATCATTCTGAT ACGGATCATCCCATTTTTGACAACAGCACCTACGTTCCTATCTTCTCTCCAAATCAAATTTTGACTCTCG AATTTCATGATTATCAAAAGATCGGCAAAGACCGTTTCATTGGCTCTGTACAAATTCCTACATCAAATGT TTTCAAAAAAGATCCTAAATCAGGAAAATATGTTGGGAATAATGGCAAAGAAGAAATTTCAAAACTAAAA TTAAAAGACCACGAACACAAAGTTACCGAAAGCATTGTCAATGTTTCAACAACATTTATCCCAATCAATC TGGTGTATTCCCCTGAGGAGTTGGTGAATGTTGAGAAACTAGAAAAGGAGTTGAAGGAAAAGAAGAAAAA ATTCGAAGCTACCCAAGAAGAAAACGAGCAAGAGATGGAAAAAAATCCAAAGGAATGGGAAGTTGCCGAG ATCGAAGACCCATTTGACAGCGATGAAAAAAAAATAAACAGGAAGGCCAAGTTATCTTTAAACGAGTTGA TCAAGCAAAAATCTGGTATTTTGTCTATGCAAATATTGGAAGGGACTTTGAGCCCATCCTCTGCTTACCT AGAAATCTTAGCGGATGACATTTCGTACCCTGTATTCATTTGCATGAAACCATCTCAAGGTAAACTAAAC TCGGAGATGGCAAATATTTTCATTAGAGATTTGAATTACAGTAAACTACATTTTAGAGTATCGAAGAAAC ATATTGCCAAAGATTCAGATGATGTCATATCCGAAACTTCCTATAGTACATTGAAGCTACTAAAGCAAGC TTACGAAGAGCCCATGTGGTTAAACTTCAATGGGTCTAAAATGAAGGTAAGATTTTTGTACACGCCCACT AGCGTGAAACTGCCTAGCAGTGAAAGTGTTGAAGACACTGGTTATTTGAATATAAAGCTTATTTCCGGAC ACGGTCTGAAGTCCGCAGATAGGAATGGCTATTCAGATCCATTTGTTCACATCTTTGTCAATGATAAAAA AGTTTTCAAATCGAACATTAAAAAGAAAACATTGGATCCCGTATGGAACGAAGATGCTAAAATACCAATC CTTTCAAGAAGTAAGAATCAAGTCATATTTAATGTTCTTGATTGGGATCGTGCAGGTGATAATGACGACT TAGGCCAAGCTTCACTTGACGTTTCCTCATTAGAAGTTGGTAAAACTTACAACTGGAATTTGAATTTAAA CACACAAGGAAGTATCAAATTACAAGGTTCATTCAACCCAGAATATATCAAGCCAAGTTTTGATATCGTG AAAGGCGGTATCACTGATAAGCCGATGAAAATAGCCAGTGGTGCAGCCCATGCAACTGTTGGCATAGCTG GTACTGGTATAGGAGCAGCAACAGGAGTTGCCACTGGTGGTTTAAAGAAAGGTGGTCACCTTCTAAAATC TCTAGGTGGCAATCCAATGAAAAGAAGCAAGAGCAGCAATGGAAATGAGTCCAACGGTGCAAAAAAATCA TCAGAGAAAAAATCTTTTGATAGGAGATCCCCAAGTAATTTGAATAGCACTAGTGTAACACCAAGAGCTT CACTAGACTATGATCCATCAGTACCTAACACAAGTTACGCGCCCGTTCAAAGCGCATCTCCTGTAGTCAA GCCAACTGACAACACTTCTAGCTCAAGCAACAAAAAAGATACCCCTAGTAGCAACTCTAGAGGACATTCT CGTGCAAGCAGTTTTGCGCGTACTTTAGCTCCTCATGGCACTTACAATGGTTTTATTACCGTGGTTGCTG CGGAAAACGTTGCCAAGCATGTTCAAATTAAGATCTCTTTAACTCAAGGTGGTAGACTAAAACACATATA CAAAACGAAAAGCCAAAAAGCCAATAATGATGGTGTTGCCGTATTTGATGAAGAGTGCTCGTTCAAGGCT TCTCCCGAAGCCAATTTGGTACTGGGTGCAATTTCCCATCAAAGACTATCGAGGGACAAAGATCTTGGTA TTGCTCAAATCAACTTGGGTGACCCTCAAATTCAACAAGATGGCCAAATTTCTGTAAAATTAGGAGACGG TCATCTGATTGTAAAGATTAATTACGGTAAAGACAAGAATGGTCAGGTACCTCCCGTGCCAGAAGTTCCT CAAGAATACACGCAGTAA *** z46373.1 (23189-18552) -------------------------------------------------------------------------------- 124. Saccharomyces Tricalbin2 chromosome 14 Gene prediction ORF N2250 Soler-Mira A., Saiz J.E., Ballesta J.P. and Remacha M. Yeast 12 (1996) 485-491 MSPNSSKTRTDQISSMPGINEATKVESKNVVKDAVPIKSEVETNGTSIVREKQDPSYVGWKQVGGWEEKD ELTSEDLLVDVNKDTFLGNLLPDKFYGDWYHEVAILIIAGLCSFVLGYFKFSLASVLIVMLTTGMLYRTS SKKYRESLRDLAQKEQTVEKITSDYESVEWLNTFLDKYWPIIEPSVSQQIVDGTNTALSENVAIPKFIKA IWLDQFTLGVKPPRIDAIKTFQNTKSDVVVMDVCLSFTPHDMSDLDAKQCRNYVNSNVVLKAKIFGMDIP VSVADIFFQVFVRFRFQLMTTLPLVETINIQLLEVPEVDFISRLLGNSVFNWEILAIPGLMRLIQKMAFK YLSPVLLPPFSLQLNIPQLLSKTGLPIGVLEIKVKNAHGLRKLVGMIKKTVDPYLTFELSGKIVGKTKVF KNSANPVWNESIYILLQSFTDPLTIAVYDKRETLSDKKMGTVIFNLNKLHANHYHKNEKVHFLRNSKPVG ELTFDLRFFPTIEPKKLLNGDEEPLPDMNTGITKITIRELKGLDELSDKKFVFAELYVNAELVMTTKKEK RTAHLKWNSDYYSVVTDRRKTICRFVLKDQSGKVISSSVQPLNHLIDRTEVNKEWIPLRNGKGELKVTTY WRPVDIDLGLKSVGYTTPIGMLRVFINKAENLRNPDSLGKISPYAKVSVNGVARGRTNERIETLNPIWNQ SIYVSVTSPLQKVSIDCFGIDTNGDDHNLGSLNIQTQNIYHKDNDDKYTIFIDNAPRTGNLIGKKGVKGT VTYYLSFYPVVPVLSLEEAKEVDEINEKKDKLEKQKSTLDDKNISKEEKERIKKEEFRLTEKYDMYSYKM KLDLDELLQYNAGVLGVTVLGGELPQPGLYVQTFFDSCGYAAITSAKNAIRTIKTGWSGDFMIKELEWSV TTFRVTKTKDANKAENFICEVNIPTIELVRNCYYKPSVLNLIGKKSAKLLVQVSWFPVTATELPQSDLIT NSGDLKITAKSAENLIGVNKNGYSDPYVEFFLNEKSTSPFFKTAVQKKTLNPTWNESKTIEVSNRVNDYL TINVKDYESTNSNRSIGKAVVPLSTIDPESDTTFNIPLVGPKGEDGGVLHLEFEFEPRYTTNVVKREAGL GNFATKGLGTGIKAGSTVFALGTNVVSTGLGTIDKVKAGVFGGKKSTTTGDKKSEEKQ - ATGTCTCCAAACTCGTCGAAAACTCGAACGGACCAGATAAGCTCCATGCCTGGTATTAATGAAGCCACGA *** AGGTGGAAAGTAAGAATGTTGTGAAGGATGCTGTTCCAATAAAATCTGAAGTTGAAACCAATGGTACATC AATAGTAAGAGAAAAACAAGATCCATCGTACGTTGGTTGGAAACAAGTTGGTGGTTGGGAGGAAAAGGAC GAGTTAACTTCCGAAGACCTTTTAGTGGACGTAAACAAGGACACTTTTTTGGGGAACCTTTTACCAGATA AATTCTATGGTGATTGGTATCATGAAGTCGCTATTCTCATCATCGCTGGTTTATGTTCCTTTGTGCTGGG CTATTTTAAATTCTCTCTCGCGTCCGTCCTTATCGTGATGCTAACCACAGGAATGTTATATAGAACTTCG TCCAAAAAATATAGGGAATCGTTAAGGGATTTAGCCCAGAAAGAACAAACTGTAGAGAAAATTACTAGTG ATTATGAATCTGTCGAATGGTTAAACACCTTTTTAGATAAATACTGGCCCATTATCGAACCTTCTGTCTC CCAACAAATTGTCGATGGTACAAATACTGCATTATCTGAAAATGTGGCAATTCCAAAGTTTATAAAAGCC ATCTGGCTGGATCAATTTACGTTAGGTGTGAAGCCTCCAAGAATTGATGCCATAAAGACATTCCAAAATA CAAAATCTGATGTCGTAGTCATGGACGTATGTCTATCATTCACTCCACACGACATGTCTGATCTTGATGC AAAACAATGCAGGAATTACGTAAATTCCAATGTCGTATTAAAGGCAAAGATATTCGGAATGGACATACCT GTTTCAGTTGCTGATATTTTTTTTCAAGTTTTTGTTAGATTTCGTTTCCAATTGATGACAACTTTGCCTC TTGTTGAAACTATAAATATTCAGTTATTGGAAGTTCCTGAAGTTGATTTTATTAGTCGTTTATTGGGTAA CTCCGTCTTTAATTGGGAAATCCTGGCTATTCCAGGCTTAATGAGATTGATTCAAAAAATGGCATTTAAA TACTTGAGCCCTGTTTTACTCCCACCTTTCTCTTTGCAACTTAATATACCACAACTTCTTTCCAAGACTG GCTTACCTATAGGTGTTTTGGAAATCAAAGTCAAAAATGCCCATGGATTAAGAAAACTTGTGGGCATGAT CAAGAAAACAGTTGACCCATACTTGACATTTGAGCTCTCTGGTAAAATAGTCGGTAAAACTAAGGTTTTT AAAAATTCTGCTAATCCTGTTTGGAATGAATCCATTTACATTCTGTTGCAATCTTTTACTGATCCACTTA CAATAGCCGTATATGACAAACGCGAAACCTTAAGCGACAAAAAAATGGGTACAGTAATTTTCAACTTGAA TAAGTTACATGCAAATCACTATCACAAAAATGAAAAGGTACATTTCCTAAGAAATTCTAAACCTGTCGGT GAGTTGACATTTGATTTGCGATTTTTCCCCACTATTGAACCAAAAAAATTACTGAACGGTGATGAGGAGC CTTTACCGGATATGAATACAGGTATCACCAAAATTACTATTCGCGAACTCAAGGGACTGGATGAACTAAG TGACAAAAAATTCGTCTTTGCAGAGTTGTATGTCAATGCAGAATTGGTGATGACCACAAAGAAAGAGAAA AGAACTGCCCATTTGAAATGGAACTCAGATTATTATTCTGTGGTAACAGACCGTAGAAAGACTATCTGTA GATTTGTTTTGAAGGATCAGAGTGGTAAAGTAATTTCATCTTCGGTACAACCATTAAATCATTTGATAGA TAGAACAGAAGTCAATAAAGAATGGATTCCTTTAAGGAATGGAAAGGGAGAATTAAAAGTCACCACTTAC TGGAGGCCGGTAGATATCGACCTCGGATTGAAAAGTGTAGGATATACTACTCCTATCGGTATGTTGAGAG TGTTTATCAATAAGGCTGAAAACTTGAGAAATCCAGATAGCTTAGGAAAGATAAGTCCATACGCCAAAGT ATCCGTCAATGGTGTGGCAAGAGGTAGGACAAATGAAAGAATAGAGACATTGAATCCTATCTGGAACCAA TCAATTTATGTGTCTGTCACATCTCCCTTACAAAAAGTCTCAATTGACTGTTTCGGTATAGATACAAATG GCGATGATCATAATCTCGGGAGCCTTAATATTCAAACTCAGAATATATATCATAAAGACAATGACGATAA ATATACCATTTTTATTGACAACGCTCCAAGAACTGGCAACTTAATTGGAAAGAAGGGTGTAAAGGGGACC GTTACGTATTATTTATCATTTTATCCAGTTGTTCCTGTTTTAAGCTTGGAAGAGGCGAAGGAAGTTGACG AGATTAATGAGAAAAAAGATAAGCTAGAAAAGCAGAAAAGTACACTGGATGACAAAAACATCTCAAAGGA GGAGAAAGAAAGAATTAAAAAGGAAGAGTTCAGGCTCACCGAAAAATATGACATGTATAGTTACAAAATG AAGCTTGACCTCGATGAATTGCTGCAATACAATGCTGGTGTACTAGGTGTTACTGTATTAGGCGGGGAAC TACCCCAGCCTGGGCTCTATGTTCAAACATTTTTTGATTCCTGTGGTTACGCAGCGATAACTAGTGCAAA AAATGCTATTAGGACCATTAAAACAGGCTGGTCGGGCGATTTCATGATAAAAGAGCTGGAATGGTCCGTG ACTACATTTAGGGTAACAAAGACTAAAGACGCGAATAAGGCGGAAAATTTTATTTGCGAAGTCAACATTC CAACAATTGAATTGGTGAGGAACTGTTATTACAAACCTTCCGTATTAAATCTAATAGGGAAAAAGAGTGC CAAACTATTAGTTCAAGTGTCATGGTTCCCCGTAACTGCCACGGAATTGCCTCAATCAGACTTGATAACT AACTCTGGTGATTTGAAAATCACCGCTAAAAGTGCTGAAAATCTAATTGGTGTTAATAAGAATGGTTATT CCGATCCATATGTCGAATTCTTTTTGAATGAAAAGAGCACATCACCCTTCTTTAAAACCGCAGTTCAAAA AAAGACACTAAATCCTACCTGGAACGAAAGCAAAACTATCGAAGTTTCAAATCGTGTCAATGACTACTTG ACAATTAACGTGAAAGACTACGAATCCACTAACTCCAATAGGAGTATTGGAAAAGCCGTTGTTCCATTAT CTACTATTGATCCAGAGAGCGATACCACCTTTAATATACCGTTAGTGGGACCAAAGGGAGAAGATGGCGG TGTGCTACATCTTGAATTTGAGTTTGAACCCCGCTATACTACCAATGTAGTCAAACGTGAAGCCGGGCTT GGAAATTTTGCCACGAAAGGATTAGGTACAGGCATCAAAGCTGGTTCTACAGTTTTCGCCTTAGGAACCA ATGTTGTAAGCACCGGATTAGGAACAATTGATAAAGTAAAGGCCGGAGTCTTTGGTGGCAAGAAGTCTAC AACCACTGGGGACAAAAAATCCGAAGAGAAGCAATAA *** x89016.1 6279-9815 -------------------------------------------------------------------------------- 125. Saccharomyces Tricalbin1 chromosome 15 Gene prediction YOR3141c Voss H., Benes V., Andrade M.A., Valencia A., Rechmann S.,Teodoru C., Schwager C., Paces V., Sander C. and Ansorge,W. Yeast 13 (1997) 655-672 MAKEDTGVTAPKKPETAQVANINGIDKLEPPKTKEETESSKSVSSEKAAHASDESFKRSIHEASYVGWKQ IGGWEDKDELTLDDELMDMTRETFLDNIIPDSLYGDWYHSVAIFFIGGVASFALGHYKFSMGSAFFVIVI TSLLYRTSAKKYRGSIRELVQKEFTVQKVENDYESLEWLNAFLDKYWPILEPSVSQLIVQQANEQMATNE AIPKFITQLWIDELTLGVKPPRVDLVKTFQNTASDVVVMDWGISFTPHDLCDMSAKQVRNYVNELAVVKA KIFGITIPVSVSDIAFKAHARVKFKLMTPFPHVETVNIQLLKVPDFDFVATLFGRSIFNWEILAIPGLMT LIQKMAKKYMGPILLPPFSLQLNIPQLLSGSNLSIGILEITVKNAKGLKRTSSILNESIDPYLSFEFNDI SIAKTRTVRDTLNPVWDETLYVLLNSFTDPLTISVYDKRAKLKDKVLGRIQYNLNTLHDKTTQRNLKAQF LRNSKPVGELTFDLRFFPTLEEKKLPDGSVEELPDLNTGIAKVVVEEGSRFAEEEQKVTAYVEVYLNAKL VLTTGKATDTGTLKWNSDYEAVIADRRKTRYKFVVKDGKGEEIGSTIQTLNDLIDRSQVNKNLIPLKNQK GDIKITTYWRPVRLEIGSNSVAYTPPIGAIRVFIEKANDLRNLEKFGTIDPYCKVLVNGLSKGRTDFKSQ TLNPVWNQVIYVAVTSPNQRITLQCMDVETVNKDRSLGEFNVNVQDLFKKDENDKYEETIDEKAKVGRLV MPKKKPKGTITYYTSFYPALPVLTLEEIQDLDKVNKKKKALELRKSAIDEKKISKEDKAKFDQEWNEVKE LEDMYSNRQKLDLPELLQYNQGVLAVTVLNGELPDSGLYVQAFFDDNGHPRFVSPRIPSRIVKNGWSGDV IIKELDKSITTFRVAKNKNYNRVEKCVCEVELPTQELVKNCYYKPSILHLSGEGSAKLMLQISWFPIDTK QLPANDLITNSGDLTIMSRSAENLIASDLNGYSDPYLKYYINNEEDCAYKTKVVKKTLNPKWNDEGTIQI NNRLNDVLRIKVMDWDSTSADDTIGTAEIPLNKVKVEGTTELDVPVEGLENAGQDGGMLHLAFSFKPRYT ISVSKREKKVGDIASKGLGTGLKAGTTVIGGGVGAIGKIKKGVFGGLGSLTNHKKNHEMGEEETKF - ATGGCCAAAGAAGATACTGGGGTAACAGCACCAAAGAAGCCCGAAACAGCCCAAGTAGCTAACATAAATG *** GGATAGATAAGTTAGAACCTCCAAAGACGAAAGAGGAAACCGAATCCAGTAAAAGCGTGTCATCTGAGAA GGCGGCACATGCTAGTGATGAAAGCTTCAAGAGAAGTATCCATGAAGCTTCTTATGTCGGCTGGAAACAG ATTGGTGGCTGGGAAGACAAAGACGAATTAACTTTAGATGATGAATTGATGGATATGACTAGAGAAACCT TCTTAGATAACATCATACCGGACAGCCTTTACGGTGACTGGTATCATTCGGTAGCCATTTTCTTTATCGG AGGCGTGGCATCATTTGCACTTGGTCATTATAAGTTTTCAATGGGGTCGGCCTTTTTTGTCATCGTTATC ACTTCATTGTTGTATAGAACCTCTGCTAAAAAATACAGAGGTTCCATAAGAGAGTTAGTCCAGAAAGAGT TCACGGTGCAGAAAGTGGAAAACGACTATGAATCCCTAGAATGGTTGAATGCCTTTTTGGATAAGTACTG GCCCATTTTAGAACCTTCCGTTAGTCAATTAATCGTTCAGCAAGCTAATGAACAAATGGCTACTAATGAG GCGATTCCCAAATTTATTACTCAACTATGGATCGATGAGTTGACACTTGGTGTTAAACCCCCCAGAGTTG ATTTGGTGAAGACTTTCCAAAACACTGCATCCGATGTTGTTGTGATGGACTGGGGTATTTCTTTTACTCC TCACGATTTATGCGACATGAGTGCTAAGCAAGTCAGAAATTACGTTAATGAATTAGCGGTTGTTAAGGCC AAAATTTTTGGTATCACCATCCCTGTTTCTGTGTCAGACATTGCTTTCAAGGCTCATGCTAGAGTGAAAT TCAAATTGATGACTCCCTTCCCTCATGTCGAAACTGTTAATATCCAGCTACTGAAGGTTCCTGATTTTGA TTTTGTTGCTACCTTATTCGGCCGTTCCATCTTCAATTGGGAAATTTTAGCTATCCCAGGCCTTATGACA CTAATACAAAAGATGGCCAAGAAATATATGGGTCCAATCTTGTTACCTCCATTTTCTTTACAATTGAACA TTCCACAACTCTTATCTGGTTCCAACTTGTCCATTGGTATATTAGAAATAACTGTCAAAAATGCAAAGGG GCTAAAACGTACCTCTTCGATATTGAACGAATCAATCGACCCTTACTTATCTTTCGAATTTAACGATATA TCTATTGCCAAGACAAGAACCGTAAGAGACACATTGAACCCCGTTTGGGACGAAACTCTGTACGTCTTGT TAAACTCATTCACTGACCCCTTGACCATTAGTGTTTATGATAAGCGTGCAAAATTGAAGGATAAAGTCCT AGGCAGAATTCAGTACAACTTGAATACTTTACATGATAAAACCACGCAAAGAAACTTGAAAGCTCAGTTT TTAAGAAACTCTAAACCGGTTGGGGAATTGACTTTTGATTTAAGATTCTTCCCAACTTTAGAAGAGAAAA AGTTGCCGGATGGATCTGTGGAGGAACTACCGGATTTGAATACTGGTATTGCTAAAGTTGTGGTCGAAGA AGGTTCTCGTTTTGCTGAAGAAGAACAGAAGGTTACTGCCTACGTTGAAGTTTACTTGAATGCTAAACTA GTGTTAACCACTGGTAAGGCAACTGACACTGGTACATTGAAGTGGAATTCAGACTACGAAGCAGTTATTG CAGATCGTCGTAAAACAAGATATAAGTTTGTCGTCAAGGATGGCAAAGGAGAAGAAATTGGATCTACCAT TCAAACCCTGAATGATTTAATAGATAGAAGCCAAGTGAACAAAAATTTGATTCCATTAAAAAACCAAAAG GGTGACATAAAGATTACCACATATTGGAGACCTGTTAGACTGGAGATTGGTTCCAACTCTGTAGCTTACA CGCCACCAATTGGCGCCATCAGAGTATTCATTGAGAAGGCAAACGATTTGAGAAATTTGGAAAAGTTTGG TACCATTGATCCATACTGTAAAGTTTTGGTTAATGGTTTATCGAAGGGTAGAACTGATTTCAAGAGCCAA ACTTTGAATCCTGTCTGGAATCAAGTTATTTATGTTGCAGTTACTTCACCAAACCAAAGAATTACGCTTC AATGTATGGATGTCGAAACAGTCAACAAAGATCGTTCACTTGGTGAATTCAATGTTAACGTTCAAGATTT ATTTAAGAAGGATGAGAATGATAAATATGAGGAAACTATTGATGAAAAAGCTAAAGTTGGTCGTCTAGTG ATGCCTAAGAAAAAACCTAAGGGCACTATAACATACTATACCTCCTTTTATCCCGCTTTACCTGTTTTAA CGTTAGAGGAAATCCAAGATTTAGATAAAGTTAACAAAAAGAAAAAAGCATTGGAACTGCGTAAGTCAGC AATTGATGAGAAAAAAATTTCTAAAGAAGACAAAGCCAAATTTGATCAAGAATGGAATGAGGTCAAAGAA TTGGAAGACATGTATAGTAATAGACAGAAATTGGATTTGCCAGAATTATTGCAATACAACCAAGGTGTTC TTGCTGTCACTGTCCTTAATGGGGAATTGCCCGACTCTGGGCTATACGTCCAAGCGTTTTTCGATGATAA TGGTCATCCAAGATTTGTTAGTCCACGTATTCCATCGAGAATTGTCAAGAATGGTTGGTCAGGTGACGTG ATCATAAAAGAATTGGACAAATCCATTACCACTTTTAGAGTTGCTAAAAATAAAAACTACAACAGAGTGG AGAAATGCGTTTGTGAAGTAGAACTACCCACACAAGAGTTAGTTAAGAACTGTTATTATAAGCCATCAAT ATTACATCTTTCAGGTGAAGGCAGTGCTAAACTAATGCTCCAAATATCATGGTTCCCTATTGATACAAAA CAGTTGCCGGCAAATGACCTGATCACAAATTCTGGTGATTTGACGATTATGTCGAGGAGTGCAGAAAACT TGATAGCATCCGATTTAAATGGTTATTCGGACCCATACTTAAAGTATTACATCAATAATGAGGAAGACTG CGCTTACAAGACGAAGGTTGTTAAGAAAACTTTGAATCCTAAATGGAATGATGAAGGAACTATTCAAATC AATAACCGTTTAAATGATGTTCTAAGAATCAAAGTCATGGACTGGGATTCCACATCTGCGGATGATACCA TTGGTACAGCAGAAATCCCATTGAATAAGGTCAAAGTCGAGGGTACTACCGAATTAGACGTACCGGTAGA AGGATTAGAGAACGCTGGTCAAGACGGTGGTATGTTGCATTTAGCTTTCAGCTTTAAGCCAAGATACACC ATTAGCGTGAGTAAAAGAGAAAAGAAGGTCGGAGATATAGCATCCAAGGGACTAGGTACTGGTTTGAAAG CTGGTACGACCGTGATAGGCGGCGGTGTTGGTGCCATTGGCAAGATCAAGAAAGGGGTATTCGGTGGACT AGGCAGCCTCACAAACCATAAGAAGAATCATGAGATGGGCGAAGAAGAAACTAAGTTTTAG *** x94335.1 (6745-10305) -------------------------------------------------------------------------------- 126. Trypanosoma chromosome 10 T. brucei sequence data were obtained from The Sanger Institute website at http://www.sanger.ac.uk/Projects/T_brucei/. Sequencing of the T.brucei genome was accomplished as part of the Trypanosoma Genome Network with support by The Wellcome Trust also 3 ests aa063745, al478014, al476446 MEKANELMQRFGELNNPSHIFLAVVIAWLVLRCIYSIGLVLLVEVALVVGAVSYLIRKEG KRTAFNILHAHRLMRDKEFMKTVLERDLPEWLINPSANNVQWLNSLINEMWKPISEATAT TVKNCLEPLLETYKPSFIYSMNLKQCTMGSQPFVITGIQYHPSREKESILDVTMTWDSDM DIVIHLDMPGPDMNVHVRRLQLSMQTRVVLFPYVSVWPCFGNMSVSIMKLWMLNFDISAG GVALDAVPAVGSFLDNFFRKTLVGMMQYPKRWTFPIVQGYEMDTSLADSAMGTLRIRFLR ANEWYHRYVSDRAKTPYYIKLLMSGEDPKKRLLKSNIYSGLDTTFSDVFSFILYDTELTL HFWMYFDVPGYDVLIGECVVPVKSLVESKGREYTCMMSKTSGSRTTVRSKLLIMPEFLPY NTGGTTTTGSAPQQAPSRAVSESFANSLKSTSDAIVPPSTRSTVPNDDGVENHGGGTLFV TVQRCRNLKNKETIGVSDPYVKLQLRKQTRKSPYISSTLNPDFNFEAALEVYDIRSDVLH ISILDKNDLVKDRLMGTLRIMLSQVAAAPGDIIRGDMNLDPEGQISLELKLLRH - ATGGAAAAGGCAAATGAACTGATGCAGCGCTTCGGTGAGCTCAATAACCCCAGTCACATC *** TTTCTGGCGGTGGTAATTGCGTGGCTTGTACTGCGATGCATCTATTCCATTGGACTCGTT TTGCTCGTGGAAGTTGCTCTGGTCGTCGGTGCGGTGTCGTATCTGATTCGAAAGGAGGGC AAAAGAACGGCATTCAACATTCTTCATGCCCACCGTCTTATGAGGGACAAGGAGTTCATG AAAACAGTTCTTGAAAGGGATTTACCTGAGTGGCTCATCAACCCCAGCGCGAACAATGTC CAGTGGTTGAACTCCCTCATTAACGAAATGTGGAAACCTATCTCCGAAGCGACAGCGACA ACGGTGAAGAATTGCCTTGAACCACTTCTTGAGACCTATAAGCCTTCTTTTATTTACAGC ATGAATCTCAAACAGTGCACTATGGGCAGCCAACCATTCGTAATCACCGGTATCCAGTAT CATCCCAGTCGGGAGAAGGAGTCGATATTGGATGTTACGATGACATGGGACAGTGATATG GACATTGTTATTCATTTAGATATGCCAGGTCCGGATATGAACGTCCACGTGCGTCGGTTG CAACTCAGCATGCAAACAAGAGTTGTGCTATTTCCATATGTTTCCGTGTGGCCCTGCTTC GGGAACATGTCTGTTTCGATTATGAAACTATGGATGCTCAATTTCGACATTTCAGCAGGT GGAGTGGCATTGGATGCCGTACCAGCCGTGGGTTCCTTTCTGGACAATTTCTTCCGGAAG ACATTGGTTGGTATGATGCAATATCCCAAAAGGTGGACCTTTCCAATAGTACAGGGATAT GAAATGGACACTTCTCTTGCTGACTCTGCTATGGGAACTCTACGCATTCGCTTTCTGCGG GCAAACGAGTGGTACCACCGCTACGTGTCTGACCGGGCGAAGACGCCGTATTACATCAAA CTGTTGATGTCCGGTGAAGACCCGAAGAAGAGGCTTCTGAAAAGCAATATCTACAGCGGG TTGGACACGACGTTTAGTGACGTATTTAGTTTCATTTTGTACGACACAGAACTCACCTTG CATTTTTGGATGTATTTTGATGTGCCTGGGTACGACGTTCTAATTGGTGAGTGTGTTGTG CCTGTGAAGTCCTTGGTGGAGAGCAAAGGCCGCGAATACACCTGCATGATGTCGAAAACA TCCGGTTCAAGGACAACAGTTCGCTCGAAGCTATTAATCATGCCTGAGTTTTTACCGTAT AACACCGGTGGGACAACTACAACAGGTTCCGCTCCCCAACAGGCGCCGTCGCGTGCGGTA TCGGAATCATTTGCGAATAGTTTGAAGTCGACAAGCGATGCGATCGTACCTCCAAGCACT CGCTCGACGGTGCCGAACGATGATGGTGTTGAAAACCACGGGGGTGGAACGCTTTTCGTC ACGGTGCAACGCTGCAGGAATCTGAAGAACAAAGAAACTATTGGGGTCTCCGACCCATAC GTCAAGTTACAGCTGCGCAAGCAAACACGCAAATCCCCGTATATTAGTTCAACCCTCAAC CCTGATTTCAACTTTGAGGCGGCATTGGAGGTGTACGACATTCGCAGCGATGTGCTGCAC ATATCCATACTTGACAAAAATGACCTTGTAAAGGACCGACTCATGGGAACTTTGCGAATC ATGCTTAGCCAGGTTGCGGCAGCCCCCGGTGATATTATACGTGGTGATATGAATCTCGAT CCTGAGGGGCAAATATCTCTTGAACTTAAGCTTCTGCGCCACTAA *** Sanger_5691|TRYP10.contigs.fasta_TRYP10.0.000041 (215662-213878)